Csa1G059730 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G059730
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Ankyrin repeat-containing protein; contains IPR020683 (Ankyrin repeat-containing domain)
Location	Chr1 : 6489869 .. 6490963 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGCTCAGCGTTGACTTCCGACGATCCTATTTCTTATTTTCCTTCTTCTTCTCCTTCACAAACCTCTGTTGCCGACACTGTGGTGATCAATATAATCGACGGACAAGGTAGAATATGAGGATTTCATTTCTAGAAACTCTATGTTCATATATATCCCTTCATAGTTCTGTTGTTAATTTCATGCACTTTTCCTTAAGTTTACATCCCCTCTCCCTAACATTATCACATTGCAAACTCTCCAATCATTAGCAAAAGAAAATTTCTAATAAAATATAAATTTGTGGAATAGATTTAAAAATGGCAACTAGATTCAAAGTATTAGTATATATAACAACATTTTTTAAAATTTTTTAAAATTTCAAATATATGTAAAATCTATCAATGATAGACCATGTTGTAAATATTGGTTATTAATGTTTTATTCATGTATCTACTACAACTTTGATATTATAAGTTGAGACTTAAATTATTGTTGACTTAAGTTAATGTTTAAACTTTAAATTTCTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTGGTATTACGGATTGTTTGTTTGTAGGTGCATCAATGGAGAGTAAAGAAAACATTAAAAATGCTGTTAAGTTACATGAAGCTGCTTTAAAGGGTGATTGGGAAGCTGCCAATAATATATTTAAAAAAGATTCATCATGGATCACTAAGAAGATAACTATAAGAGAGAATACGGCACTCCATATTGCTGCTGCTGGAAAGCATATTTCTTTTGTTGAAAAGTTGGTTAAACTTTACTCTTCAAATGGCTTTGACTTAGCTATAAAAAATAGAGATGGACGTACTGCCCTTGCTTATGCTGCTGTATCAGGAATTGTAAGGATCGCTGAAACAATTGTTGACAATGATCACAAGCTTCGAGATCCTGTTGATGATGCTCATCTTAAATATGTTCCACTTCTTAGTTCTGTATTTTACAAACTCAAAGACATGGCTTCTTATCTTTTCTCTCAGACTAATTTTAATGATCTACAAACTAATCAGCAACTTGATCTTCTCTTAGCTACAGTGGACAGTGATTACTATGGTTTTACTTCCAAATCCCTTATTTGA

mRNA sequence

ATGGGAAGCTCAGCGTTGACTTCCGACGATCCTATTTCTTATTTTCCTTCTTCTTCTCCTTCACAAACCTCTGTTGCCGACACTGTGGTGATCAATATAATCGACGGACAAGGTGCATCAATGGAGAGTAAAGAAAACATTAAAAATGCTGTTAAGTTACATGAAGCTGCTTTAAAGGGTGATTGGGAAGCTGCCAATAATATATTTAAAAAAGATTCATCATGGATCACTAAGAAGATAACTATAAGAGAGAATACGGCACTCCATATTGCTGCTGCTGGAAAGCATATTTCTTTTGTTGAAAAGTTGGTTAAACTTTACTCTTCAAATGGCTTTGACTTAGCTATAAAAAATAGAGATGGACGTACTGCCCTTGCTTATGCTGCTGTATCAGGAATTGTAAGGATCGCTGAAACAATTGTTGACAATGATCACAAGCTTCGAGATCCTGTTGATGATGCTCATCTTAAATATGTTCCACTTCTTAGTTCTGTATTTTACAAACTCAAAGACATGGCTTCTTATCTTTTCTCTCAGACTAATTTTAATGATCTACAAACTAATCAGCAACTTGATCTTCTCTTAGCTACAGTGGACAGTGATTACTATGGTTTTACTTCCAAATCCCTTATTTGA

Coding sequence (CDS)

ATGGGAAGCTCAGCGTTGACTTCCGACGATCCTATTTCTTATTTTCCTTCTTCTTCTCCTTCACAAACCTCTGTTGCCGACACTGTGGTGATCAATATAATCGACGGACAAGGTGCATCAATGGAGAGTAAAGAAAACATTAAAAATGCTGTTAAGTTACATGAAGCTGCTTTAAAGGGTGATTGGGAAGCTGCCAATAATATATTTAAAAAAGATTCATCATGGATCACTAAGAAGATAACTATAAGAGAGAATACGGCACTCCATATTGCTGCTGCTGGAAAGCATATTTCTTTTGTTGAAAAGTTGGTTAAACTTTACTCTTCAAATGGCTTTGACTTAGCTATAAAAAATAGAGATGGACGTACTGCCCTTGCTTATGCTGCTGTATCAGGAATTGTAAGGATCGCTGAAACAATTGTTGACAATGATCACAAGCTTCGAGATCCTGTTGATGATGCTCATCTTAAATATGTTCCACTTCTTAGTTCTGTATTTTACAAACTCAAAGACATGGCTTCTTATCTTTTCTCTCAGACTAATTTTAATGATCTACAAACTAATCAGCAACTTGATCTTCTCTTAGCTACAGTGGACAGTGATTACTATGGTTTTACTTCCAAATCCCTTATTTGA

Protein sequence

MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQTNFNDLQTNQQLDLLLATVDSDYYGFTSKSLI*

Homology

[Close]

BLAST of Csa1G059730 vs. TrEMBL
Match: A0A0A0LU57_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059730 PE=4 SV=1)

HSP 1 Score: 413.3 bits (1061), Expect = 1.8e-112
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60
           MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG
Sbjct: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60

Query: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120
           DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD
Sbjct: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120

Query: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180
           GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT
Sbjct: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180

Query: 181 NFNDLQTNQQLDLLLATVDSDYYGFTSKSLI 212
           NFNDLQTNQQLDLLLATVDSDYYGFTSKSLI
Sbjct: 181 NFNDLQTNQQLDLLLATVDSDYYGFTSKSLI 211

[Close]

BLAST of Csa1G059730 vs. TrEMBL
Match: A0A0A0LRZ3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060260 PE=4 SV=1)

HSP 1 Score: 175.3 bits (443), Expect = 8.2e-41
Identity = 96/160 (60.00%), Postives = 116/160 (72.50%), Query Frame = 1


Query: 45  ENIKNAVKLHEAALKGDWEAANNIFKKDS-SWITKKITIRENTALHIAAAGKHISFVEKL 104
           E I  AV L++AA KGDW+AA +IF     SWI+K+IT + NTALHIAAA KHISFVEKL
Sbjct: 17  EEIIKAVNLYQAAFKGDWKAAQSIFDDHPPSWISKEITSKGNTALHIAAAAKHISFVEKL 76

Query: 105 VKLYSSNGFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLS 164
           +KLYS +  DLA  N  G TAL+YAAVSG+V IAE +V  ++ L D  D  H   +P+L 
Sbjct: 77  IKLYSHHQLDLARPNGAGCTALSYAAVSGVVSIAEAMVLQNNILPDIPD--HKGRIPVLK 136

Query: 165 SVFYKLKDMASYLFSQTNFNDLQTNQQLDLLLATVDSDYY 204
           +V YK KDMA YL+ QTNF  L+ NQQ DLLLAT+DSDYY
Sbjct: 137 AVIYKRKDMAFYLYHQTNFEGLENNQQFDLLLATIDSDYY 174

[Close]

BLAST of Csa1G059730 vs. TrEMBL
Match: A0A0A0LWY1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059180 PE=4 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.3e-35
Identity = 87/164 (53.05%), Postives = 121/164 (73.78%), Query Frame = 1


Query: 40  SMESKENIKNAVKLHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISF 99
           S + K  +   V L++AA+KGDW+ A +IF  DSS IT KIT   +T LHIAAA KHISF
Sbjct: 142 STKKKGMLPVQVVLYQAAIKGDWKTAKSIFDVDSSAITMKITGGVDTPLHIAAAAKHISF 201

Query: 100 VEKLVKLYSSNGFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYV 159
           VEKLV+ YS +  DLAIKN++G TALA+AA SG+VRIAE +VD + KL + + +A+ K+ 
Sbjct: 202 VEKLVEKYSLS--DLAIKNKNGDTALAFAAASGVVRIAEVMVDKNEKLPN-ICNANTKF- 261

Query: 160 PLLSSVFYKLKDMASYLFSQTNFNDLQTNQQLDLLLATVDSDYY 204
           P+L +V YK K+MAS+L S+TNF  ++  +Q++LL++ + SDYY
Sbjct: 262 PVLMAVAYKRKEMASFLLSKTNFQKIEAFEQIELLISAISSDYY 301

[Close]

BLAST of Csa1G059730 vs. TrEMBL
Match: A0A0A0LRU9_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058660 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 7.4e-34
Identity = 86/153 (56.21%), Postives = 115/153 (75.16%), Query Frame = 1


Query: 51  VKLHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSN 110
           V L+++A+KGDW+ A +IF  DSS IT KIT  E+T LHIAAA KHISFVE LVK YSS 
Sbjct: 152 VVLYQSAIKGDWKTAKSIFDVDSSAITMKITDGEDTPLHIAAAAKHISFVENLVKEYSSP 211

Query: 111 GFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLK 170
             DLAIKN +G TALA+AA SG+VRIA+ +VDN+ +L + + +A+ K  P+L +V YK K
Sbjct: 212 S-DLAIKNGNGDTALAFAAASGVVRIAKVMVDNNAELPN-LYNAN-KPFPVLMAVAYKRK 271

Query: 171 DMASYLFSQTNFNDLQTNQQLDLLLATVDSDYY 204
           +MAS+L S+T+F  L   +Q++LL+A + SDYY
Sbjct: 272 EMASFLLSKTDFQKLNNFEQIELLIAAISSDYY 301

[Close]

BLAST of Csa1G059730 vs. TrEMBL
Match: A0A0A0LU19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1)

HSP 1 Score: 129.4 bits (324), Expect = 5.1e-27
Identity = 72/161 (44.72%), Postives = 99/161 (61.49%), Query Frame = 1


Query: 51  VKLHEAALKGDWEAANNIFKKDSSWITKKITIREN-TALHIAAAGKHISFVEKLVKLYSS 110
           + L+ AALKGDWE A +I K D+SW       R+N TALHIAA  KH+ FVEKL+   + 
Sbjct: 114 ISLYHAALKGDWEKAESILKADTSWSVSNYITRDNETALHIAAGAKHVEFVEKLIDTMTL 173

Query: 111 NGFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKL 170
           +  D+ I N  G TAL +AA SG+VRIAE +V  +  L  P+        PL  ++ Y+ 
Sbjct: 174 D--DMVIINTHGNTALCFAATSGVVRIAELMVKKNKDL--PLIRGFGNATPLFMAISYQR 233

Query: 171 KDMASYLFSQTNFNDLQTNQQLDLLLATVDSDYYGFTSKSL 211
           K MASYLFS T+   L +  Q++LL+AT+ SD+Y  + + L
Sbjct: 234 KQMASYLFSVTDRKQLTSQDQIELLIATIHSDFYDISLEIL 270

[Close]

BLAST of Csa1G059730 vs. TAIR10
Match: AT5G35830.1 (AT5G35830.1 Ankyrin repeat family protein)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 59/153 (38.56%), Postives = 86/153 (56.21%), Query Frame = 1


Query: 51  VKLHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSN 110
           V+L++AALKGDW+AAN I  +    I +KIT +  T LHIA A KH  FV  L+    SN
Sbjct: 89  VQLYQAALKGDWKAANGIIIEQKYIIYQKITSKSETVLHIAVAAKHEGFVRNLLGSLESN 148

Query: 111 GFDLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLK 170
             DLA++N DG TAL +AA SG+V IA+ +++ +  L  P+     K  P+  +  +   
Sbjct: 149 --DLALRNVDGNTALCFAAASGVVEIAKMLIEKNKDL--PMIRGGGKTTPIHMAALFGHG 208

Query: 171 DMASYLFSQTNFNDLQTNQQLDLLLATVDSDYY 204
           +M  YL+  T F +    + ++L  A + +D Y
Sbjct: 209 EMVKYLYKNTRFREFNDEEFVNLFHAVISADIY 237

[Close]

BLAST of Csa1G059730 vs. TAIR10
Match: AT3G54070.1 (AT3G54070.1 Ankyrin repeat family protein)

HSP 1 Score: 91.7 bits (226), Expect = 6.0e-19
Identity = 52/153 (33.99%), Postives = 83/153 (54.25%), Query Frame = 1


Query: 53  LHEAALKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGF 112
           +++A L GDW+ A+ +  +    + ++IT     ALHIA A KH  FV  L++    +  
Sbjct: 54  MYKAVLTGDWKTASTLISRKECNVVEQITGNSEIALHIAVAAKHKDFVRNLLR--EMDPP 113

Query: 113 DLAIKNRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLK-YVPLLSSVFYKLKD 172
           DL++KN+DG T L++AA  G +  AE ++   + +RD  D ++ K   P+  +  Y   +
Sbjct: 114 DLSLKNKDGNTPLSFAAALGDIETAEMLI---NMIRDLPDISNEKTMTPIHIAALYGHGE 173

Query: 173 MASYLFSQTNFNDLQTNQQLDLLLATVDSDYYG 205
           M  YLFS+T+  DL   Q L+L    + +D YG
Sbjct: 174 MVQYLFSKTSIKDLNDQQYLNLFHTMISADIYG 201

[Close]

BLAST of Csa1G059730 vs. TAIR10
Match: AT3G18670.1 (AT3G18670.1 Ankyrin repeat family protein)

HSP 1 Score: 67.8 bits (164), Expect = 9.3e-12
Identity = 43/126 (34.13%), Postives = 67/126 (53.17%), Query Frame = 1


Query: 60  GDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNR 119
           G+ EA  +   ++   +T  +T   +T +H A    HI  VE++++        L IKN 
Sbjct: 60  GELEATKDFLDRNPEALTAILTSNGDTPIHKAVLSGHIKIVEEIIRRIHDPEQVLKIKND 119

Query: 120 DGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQ 179
           +G TAL YAA  GIVRIAE +V+    L   V +A  +++P++ +  Y  K +  YL+S 
Sbjct: 120 NGYTALTYAATGGIVRIAECLVNKCPGLVS-VRNAK-EHIPIVVASLYGHKHLVQYLYSH 179

Query: 180 TNFNDL 186
           T  +DL
Sbjct: 180 TPLSDL 183

[Close]

BLAST of Csa1G059730 vs. NCBI nr
Match: gi|700209398|gb|KGN64494.1| (hypothetical protein Csa_1G059730 [Cucumis sativus])

HSP 1 Score: 413.3 bits (1061), Expect = 2.6e-112
Identity = 211/211 (100.00%), Postives = 211/211 (100.00%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60
           MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG
Sbjct: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60

Query: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120
           DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD
Sbjct: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120

Query: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180
           GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT
Sbjct: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180

Query: 181 NFNDLQTNQQLDLLLATVDSDYYGFTSKSLI 212
           NFNDLQTNQQLDLLLATVDSDYYGFTSKSLI
Sbjct: 181 NFNDLQTNQQLDLLLATVDSDYYGFTSKSLI 211

[Close]

BLAST of Csa1G059730 vs. NCBI nr
Match: gi|778664848|ref|XP_011648415.1| (PREDICTED: uncharacterized protein LOC101205777 [Cucumis sativus])

HSP 1 Score: 398.7 bits (1023), Expect = 6.5e-108
Identity = 203/203 (100.00%), Postives = 203/203 (100.00%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60
           MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG
Sbjct: 1   MGSSALTSDDPISYFPSSSPSQTSVADTVVINIIDGQGASMESKENIKNAVKLHEAALKG 60

Query: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120
           DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD
Sbjct: 61  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 120

Query: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180
           GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT
Sbjct: 121 GRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLFSQT 180

Query: 181 NFNDLQTNQQLDLLLATVDSDYY 204
           NFNDLQTNQQLDLLLATVDSDYY
Sbjct: 181 NFNDLQTNQQLDLLLATVDSDYY 203

[Close]

BLAST of Csa1G059730 vs. NCBI nr
Match: gi|659067689|ref|XP_008440786.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 4.1e-94
Identity = 184/206 (89.32%), Postives = 191/206 (92.72%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQT---SVADTVVINIIDGQGASMESKENIKNAVKLHEAA 60
           MGSS LTSDD ISYFPSSS SQT   SVAD VVI I D QGASMESKENIKNAVKLH+AA
Sbjct: 1   MGSSVLTSDDHISYFPSSSRSQTTDNSVADDVVIKITDEQGASMESKENIKNAVKLHQAA 60

Query: 61  LKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIK 120
           LKGDWEAAN+IFKKD+SWITKKITIRENTALHIAAA KHISFVEKLVKLYSSN FDLAIK
Sbjct: 61  LKGDWEAANDIFKKDTSWITKKITIRENTALHIAAAAKHISFVEKLVKLYSSNDFDLAIK 120

Query: 121 NRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLF 180
           NRDGR ALAYAA+SGIVRIAETIVDNDHKLRDPVDDAHLKY+PLLSSVFYKLKDMASYLF
Sbjct: 121 NRDGRPALAYAAISGIVRIAETIVDNDHKLRDPVDDAHLKYLPLLSSVFYKLKDMASYLF 180

Query: 181 SQTNFNDLQTNQQLDLLLATVDSDYY 204
           SQTNF+ LQT QQL+LLLATVDSDYY
Sbjct: 181 SQTNFDALQTTQQLNLLLATVDSDYY 206

[Close]

BLAST of Csa1G059730 vs. NCBI nr
Match: gi|659067691|ref|XP_008440794.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis melo])

HSP 1 Score: 352.8 bits (904), Expect = 4.1e-94
Identity = 184/206 (89.32%), Postives = 191/206 (92.72%), Query Frame = 1


Query: 1   MGSSALTSDDPISYFPSSSPSQT---SVADTVVINIIDGQGASMESKENIKNAVKLHEAA 60
           MGSS LTSDD ISYFPSSS SQT   SVAD VVI I D QGASMESKENIKNAVKLH+AA
Sbjct: 1   MGSSVLTSDDHISYFPSSSRSQTTDNSVADDVVIKITDEQGASMESKENIKNAVKLHQAA 60

Query: 61  LKGDWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIK 120
           LKGDWEAAN+IFKKD+SWITKKITIRENTALHIAAA KHISFVEKLVKLYSSN FDLAIK
Sbjct: 61  LKGDWEAANDIFKKDTSWITKKITIRENTALHIAAAAKHISFVEKLVKLYSSNDFDLAIK 120

Query: 121 NRDGRTALAYAAVSGIVRIAETIVDNDHKLRDPVDDAHLKYVPLLSSVFYKLKDMASYLF 180
           NRDGR ALAYAA+SGIVRIAETIVDNDHKLRDPVDDAHLKY+PLLSSVFYKLKDMASYLF
Sbjct: 121 NRDGRPALAYAAISGIVRIAETIVDNDHKLRDPVDDAHLKYLPLLSSVFYKLKDMASYLF 180

Query: 181 SQTNFNDLQTNQQLDLLLATVDSDYY 204
           SQTNF+ LQT QQL+LLLATVDSDYY
Sbjct: 181 SQTNFDALQTTQQLNLLLATVDSDYY 206

[Close]

BLAST of Csa1G059730 vs. NCBI nr
Match: gi|659067683|ref|XP_008440754.1| (PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis melo])

HSP 1 Score: 215.3 bits (547), Expect = 1.0e-52
Identity = 124/207 (59.90%), Postives = 148/207 (71.50%), Query Frame = 1


Query: 7   TSDDPISYFPSSSPSQT----SVADTVVINIIDGQGASMESK--ENIKNAVKLHEAALKG 66
           TSD   S F SS+ S T    S   +  +NI D QG +ME+K   NIK A++L++AALKG
Sbjct: 8   TSDGHNSSFSSSTRSHTTDTTSATQSTFVNINDEQGTTMENKGNNNIKKAIELYQAALKG 67

Query: 67  DWEAANNIFKKDSSWITKKITIRENTALHIAAAGKHISFVEKLVKLYSSNGFDLAIKNRD 126
           DWEAA  IFK+DSSWITKKITI++NTALH+AAA K I FVE+LVKLY SN  DL IKN +
Sbjct: 68  DWEAAKGIFKEDSSWITKKITIKKNTALHVAAAAKRIGFVEELVKLYCSNNHDLFIKNGE 127

Query: 127 GRTALAYAAVSGIVRIAETIVDNDHKL--RDPVDDAHL--KYVPLLSSVFYKLKDMASYL 186
           G TAL YAA+SG+VRIAE IV ND +      V+ AHL   YVPLL++V YK K+MASYL
Sbjct: 128 GHTALFYAAISGVVRIAEAIVKNDDQRPGNSDVNYAHLIEYYVPLLTAVIYKRKEMASYL 187

Query: 187 FSQTNFNDLQTNQQLDLLLATVDSDYY 204
           FS +    LQ  QQ  LLLAT+DSDYY
Sbjct: 188 FSLSK-EVLQPEQQFQLLLATIDSDYY 213

The following BLAST results are available for this feature:

BLAST of Csa1G059730 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LU57_CUCSA	1.8e-112	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059730 PE=4 SV=1	[more]
A0A0A0LRZ3_CUCSA	8.2e-41	60.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G060260 PE=4 SV=1	[more]
A0A0A0LWY1_CUCSA	2.3e-35	53.05	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G059180 PE=4 SV=1	[more]
A0A0A0LRU9_CUCSA	7.4e-34	56.21	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058660 PE=4 SV=1	[more]
A0A0A0LU19_CUCSA	5.1e-27	44.72	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G058090 PE=4 SV=1	[more]

BLAST of Csa1G059730 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G35830.1	2.4e-23	38.56	Ankyrin repeat family protein	[more]
AT3G54070.1	6.0e-19	33.99	Ankyrin repeat family protein	[more]
AT3G18670.1	9.3e-12	34.13	Ankyrin repeat family protein	[more]

BLAST of Csa1G059730 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209398\|gb\|KGN64494.1\|	2.6e-112	100.00	hypothetical protein Csa_1G059730 [Cucumis sativus]	[more]
gi\|778664848\|ref\|XP_011648415.1\|	6.5e-108	100.00	PREDICTED: uncharacterized protein LOC101205777 [Cucumis sativus]	[more]
gi\|659067689\|ref\|XP_008440786.1\|	4.1e-94	89.32	PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X1 [Cucumis ...	[more]
gi\|659067691\|ref\|XP_008440794.1\|	4.1e-94	89.32	PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis ...	[more]
gi\|659067683\|ref\|XP_008440754.1\|	1.0e-52	59.90	PREDICTED: ankyrin repeat-containing protein At3g12360-like isoform X2 [Cucumis ...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR002110	Ankyrin_rpt
IPR020683	Ankyrin_rpt-contain_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Unigene

This gene is associated with the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
CU138657	cucumber EST collection version 3.0	transcribed_cluster

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G059730.1	Csa1G059730.1	mRNA

The following transcribed_cluster feature(s) are associated with this gene:


Feature Name	Unique Name	Type
CU138657	CU138657	transcribed_cluster

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002110	Ankyrin repeat	PROFILE	PS50088	ANK_REPEAT	coord: 83..119 score: 8
IPR020683	Ankyrin repeat-containing domain	GENE3D	G3DSA:1.25.40.20		coord: 50..190 score: 7.1
IPR020683	Ankyrin repeat-containing domain	PFAM	PF12796	Ank_2	coord: 53..144 score: 1.
IPR020683	Ankyrin repeat-containing domain	PROFILE	PS50297	ANK_REP_REGION	coord: 30..143 score: 15
IPR020683	Ankyrin repeat-containing domain	unknown	SSF48403	Ankyrin repeat	coord: 31..186 score: 1.2
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 53..203 score: 8.3
None	No IPR available	PANTHER	PTHR24177:SF42	ANKYRIN REPEAT FAMILY PROTEIN	coord: 53..203 score: 8.3

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G059730	Lsi02G005550	Bottle gourd (USVL1VR-Ls)	culsiB040
Csa1G059730	Bhi08G001486	Wax gourd	cuwgoB033
Csa1G059730	CSPI01G10190	Wild cucumber (PI 183967)	cpicuB013
Csa1G059730	Cp4.1LG09g09230	Cucurbita pepo (Zucchini)	cpecuB029

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G059730	Silver-seed gourd	carcuB0523
Csa1G059730	Silver-seed gourd	carcuB0661
Csa1G059730	Silver-seed gourd	carcuB0945
Csa1G059730	Silver-seed gourd	carcuB1020
Csa1G059730	Watermelon (97103) v2	cuwmbB000
Csa1G059730	Watermelon (97103) v2	cuwmbB032
Csa1G059730	Cucumber (Chinese Long) v2	cucuB035
Csa1G059730	Cucumber (Gy14) v1	cgycuB015
Csa1G059730	Cucumber (Gy14) v1	cgycuB087
Csa1G059730	Cucurbita maxima (Rimu)	cmacuB218
Csa1G059730	Cucurbita maxima (Rimu)	cmacuB397
Csa1G059730	Cucurbita maxima (Rimu)	cmacuB649
Csa1G059730	Cucurbita maxima (Rimu)	cmacuB848
Csa1G059730	Cucurbita moschata (Rifu)	cmocuB203
Csa1G059730	Cucurbita moschata (Rifu)	cmocuB380
Csa1G059730	Cucurbita moschata (Rifu)	cmocuB637
Csa1G059730	Cucurbita moschata (Rifu)	cmocuB835
Csa1G059730	Melon (DHL92) v3.5.1	cumeB024
Csa1G059730	Melon (DHL92) v3.5.1	cumeB026
Csa1G059730	Melon (DHL92) v3.5.1	cumeB027
Csa1G059730	Melon (DHL92) v3.5.1	cumeB083
Csa1G059730	Watermelon (Charleston Gray)	cuwcgB012
Csa1G059730	Watermelon (Charleston Gray)	cuwcgB035
Csa1G059730	Watermelon (97103) v1	cuwmB008
Csa1G059730	Watermelon (97103) v1	cuwmB043
Csa1G059730	Cucurbita pepo (Zucchini)	cpecuB055
Csa1G059730	Cucurbita pepo (Zucchini)	cpecuB474
Csa1G059730	Cucurbita pepo (Zucchini)	cpecuB506
Csa1G059730	Bottle gourd (USVL1VR-Ls)	culsiB019
Csa1G059730	Bottle gourd (USVL1VR-Ls)	culsiB022
Csa1G059730	Cucumber (Gy14) v2	cgybcuB001
Csa1G059730	Cucumber (Gy14) v2	cgybcuB239
Csa1G059730	Melon (DHL92) v3.6.1	cumedB021
Csa1G059730	Melon (DHL92) v3.6.1	cumedB022
Csa1G059730	Melon (DHL92) v3.6.1	cumedB077