Csa1G050320 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G050320
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	Auxin-independent growth promoter-like protein; contains IPR019378 (GDP-fucose protein O-fucosyltransferase)
Location	Chr1 : 5860408 .. 5861074 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAAAAAATAGGCTTCTAAAGGCTCTTGGAGCTCCAAAACAAGCAAGGATTTACACTGCAGGGGGAGAGCCCTTTGGAGGAAAGAAGGCTTTGCAACCACTTATTGCAGAATTCCCAAATATTGTAACAAAGTACACATTATCAAGAGAAGGAGAGCTCTCACCCTTCATCAACAAGTCATCTGCCATGGCTGCCATTGATTACATTGTGTCCTTGAGCAGCGATGTCTTCATGCCGTCCCATGGCGGAAACATGGGTCGAGCTATGCAGGTCATCCAACTCAATCTTGTTTGTGAAAGTTTAAAAACCCATCAAAATTTTCTCTCTAACTAAAACAACTCTGATCTTCATTTGATCGTTAGCTGTTGTAGCTAACGTATTGTTAAAATTGTATCGGTTATTTATCGCGTATTTGTTGATTTCTTAACGTGTTTGTTTTTGGCGATAGGGGCATCGAGCATATGTGGGACATAGAAAGTACATAAAGCCGAACAAAAGAGCGATGCTCGAATACTTCGATGATGCATCGATAAGTGAAACAGAGCTAGGAACAATAGTGAGGAAGCTGCATAAAGGATGTATGGGGAAACCTGAGCGAAGAACAAAGAGGAAAGATCGTGATATTATTGCATATCCTATGCCAGAATGTATGTGCCAAAGCTAA

mRNA sequence

ATGATAAAAAATAGGCTTCTAAAGGCTCTTGGAGCTCCAAAACAAGCAAGGATTTACACTGCAGGGGGAGAGCCCTTTGGAGGAAAGAAGGCTTTGCAACCACTTATTGCAGAATTCCCAAATATTGTAACAAAGTACACATTATCAAGAGAAGGAGAGCTCTCACCCTTCATCAACAAGTCATCTGCCATGGCTGCCATTGATTACATTGTGTCCTTGAGCAGCGATGTCTTCATGCCGTCCCATGGCGGAAACATGGGTCGAGCTATGCAGGGGCATCGAGCATATGTGGGACATAGAAAGTACATAAAGCCGAACAAAAGAGCGATGCTCGAATACTTCGATGATGCATCGATAAGTGAAACAGAGCTAGGAACAATAGTGAGGAAGCTGCATAAAGGATGTATGGGGAAACCTGAGCGAAGAACAAAGAGGAAAGATCGTGATATTATTGCATATCCTATGCCAGAATGTATGTGCCAAAGCTAA

Coding sequence (CDS)

ATGATAAAAAATAGGCTTCTAAAGGCTCTTGGAGCTCCAAAACAAGCAAGGATTTACACTGCAGGGGGAGAGCCCTTTGGAGGAAAGAAGGCTTTGCAACCACTTATTGCAGAATTCCCAAATATTGTAACAAAGTACACATTATCAAGAGAAGGAGAGCTCTCACCCTTCATCAACAAGTCATCTGCCATGGCTGCCATTGATTACATTGTGTCCTTGAGCAGCGATGTCTTCATGCCGTCCCATGGCGGAAACATGGGTCGAGCTATGCAGGGGCATCGAGCATATGTGGGACATAGAAAGTACATAAAGCCGAACAAAAGAGCGATGCTCGAATACTTCGATGATGCATCGATAAGTGAAACAGAGCTAGGAACAATAGTGAGGAAGCTGCATAAAGGATGTATGGGGAAACCTGAGCGAAGAACAAAGAGGAAAGATCGTGATATTATTGCATATCCTATGCCAGAATGTATGTGCCAAAGCTAA

Protein sequence

MIKNRLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAMAAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETELGTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS*

Homology

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BLAST of Csa1G050320 vs. Swiss-Prot
Match: Y1491_ARATH (Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.7e-13
Identity = 51/164 (31.10%), Postives = 76/164 (46.34%), Query Frame = 1


Query: 6   LLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAMA 65
           +L+A+      RIY A GE FGG++ ++P    FP +    ++    ELS   ++    +
Sbjct: 319 ILRAMRFDNSTRIYLAAGELFGGEQFMKPFRTLFPRLDNHSSVDPSEELSA-TSQGLIGS 378

Query: 66  AIDYIVSLSSDVFMPSHGG--NMGRAMQGHRAYVGHRKYIKPNKRAMLEYF------DDA 125
           A+DY+V L SD+FMP++ G  N    + GHR Y G R  I+P+++A+   F        A
Sbjct: 379 AVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIAREKGKRA 438

Query: 126 SISETELGTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQ 162
              E     + R + K   G P +R             PEC CQ
Sbjct: 439 GFEE----AVRRVMLKTNFGGPHKRV--SPESFYTNSWPECFCQ 475

[Close]

BLAST of Csa1G050320 vs. TrEMBL
Match: A0A0A0LRH6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050320 PE=4 SV=1)

HSP 1 Score: 330.1 bits (845), Expect = 1.5e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1


Query: 1   MIKNRLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINK 60
           MIKNRLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINK
Sbjct: 1   MIKNRLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINK 60

Query: 61  SSAMAAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASIS 120
           SSAMAAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASIS
Sbjct: 61  SSAMAAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASIS 120

Query: 121 ETELGTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 163
           ETELGTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS
Sbjct: 121 ETELGTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 162

[Close]

BLAST of Csa1G050320 vs. TrEMBL
Match: E5GBV3_CUCME (Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.0e-84
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM
Sbjct: 308 RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 367

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL
Sbjct: 368 AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 427

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 163
           GTIVRKLHKGCMG+PE RTKRKDRDIIAYPMPECMCQS
Sbjct: 428 GTIVRKLHKGCMGQPEPRTKRKDRDIIAYPMPECMCQS 465

[Close]

BLAST of Csa1G050320 vs. TrEMBL
Match: W9RV13_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_002686 PE=4 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 4.8e-65
Identity = 121/157 (77.07%), Postives = 138/157 (87.90%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKALGAP+  RIY AGGEPFGG KALQPLIAEFPN+VTK  L+R+GELSPF NKSSA+
Sbjct: 374 RLLKALGAPRTTRIYNAGGEPFGGSKALQPLIAEFPNLVTKEMLARDGELSPFANKSSAL 433

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIVSLSSDVF+PSHGGNMGRA+QGHRAYVGHRKYIKPNKRAML +F+DAS+S+ E 
Sbjct: 434 AAIDYIVSLSSDVFVPSHGGNMGRALQGHRAYVGHRKYIKPNKRAMLPFFEDASVSDAEF 493

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQ 162
            TI+R+LH    G+PE R  R DRD+IAYP+PECMC+
Sbjct: 494 STIMRELHSKSQGQPELRNFRIDRDVIAYPVPECMCK 530

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BLAST of Csa1G050320 vs. TrEMBL
Match: M5WX01_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022449mg PE=4 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 1.7e-62
Identity = 116/157 (73.89%), Postives = 138/157 (87.90%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           R LKALGAP  ARIY AGGE FG  +ALQPL+AEFPN+VTK  L+R+GELSP++NKSSA+
Sbjct: 400 RFLKALGAPSGARIYRAGGEAFGDSRALQPLVAEFPNLVTKEMLARDGELSPYMNKSSAL 459

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIVSLSSDVF+PSHGGNMGRAMQGHRAYVGHRK+IKPNKRAML +F+DASI + E 
Sbjct: 460 AAIDYIVSLSSDVFVPSHGGNMGRAMQGHRAYVGHRKFIKPNKRAMLPHFEDASIGDAEF 519

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQ 162
           G+I+R+LH+   GKPE R  R++RD+IAYP+PECMC+
Sbjct: 520 GSIMRELHRKSQGKPEPRGYRRNRDVIAYPVPECMCK 556

[Close]

BLAST of Csa1G050320 vs. TrEMBL
Match: A0A0J8CGH2_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110530 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 4.9e-62
Identity = 114/158 (72.15%), Postives = 137/158 (86.71%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKALGAP+ AR+Y AGG+P+GG  AL+PLI EFPN++TK +L+REGEL  F N+SSA+
Sbjct: 405 RLLKALGAPRDARVYVAGGKPYGGSMALKPLIQEFPNVMTKDSLAREGELLQFANRSSAL 464

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIV+LSSDVF+PSHGGNMGRAMQGHRAY GHRKYIKPNKR ML +F+D SISE E 
Sbjct: 465 AAIDYIVALSSDVFLPSHGGNMGRAMQGHRAYSGHRKYIKPNKRMMLPFFEDQSISEAEF 524

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 163
           G I+RKLH+   G+PE RT ++DRD+IAYP+PECMC+S
Sbjct: 525 GGIIRKLHEKSQGQPELRTGKRDRDVIAYPVPECMCKS 562

[Close]

BLAST of Csa1G050320 vs. TAIR10
Match: AT5G63390.1 (AT5G63390.1 O-fucosyltransferase family protein)

HSP 1 Score: 225.3 bits (573), Expect = 2.7e-59
Identity = 106/157 (67.52%), Postives = 127/157 (80.89%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKALGAP  A IY AGGEPFGG +AL+PL  EF N+VTK TL+ +GEL P+ N+SSA+
Sbjct: 393 RLLKALGAPSNASIYIAGGEPFGGSRALEPLAKEFSNLVTKETLAHKGELLPYTNRSSAL 452

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIVSLSSDVF+PSHGGNM +AMQG+RAYVGHRK+I PNKRAML   +++S+S+ EL
Sbjct: 453 AAIDYIVSLSSDVFIPSHGGNMAKAMQGNRAYVGHRKFIMPNKRAMLPLMENSSVSDAEL 512

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQ 162
             + RKLH+   G PE R  R+DRD+IAYP+PECMC+
Sbjct: 513 SFLTRKLHRKSQGYPESRRGRRDRDVIAYPVPECMCR 549

[Close]

BLAST of Csa1G050320 vs. TAIR10
Match: AT3G07900.1 (AT3G07900.1 O-fucosyltransferase family protein)

HSP 1 Score: 200.3 bits (508), Expect = 9.2e-52
Identity = 93/156 (59.62%), Postives = 117/156 (75.00%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLL+ALGAP+ ARIY AGGEP GGK+AL+PL +EFP++  KY ++   EL PF  ++S M
Sbjct: 417 RLLRALGAPRDARIYWAGGEPLGGKEALKPLTSEFPHLYNKYDIALPLELKPFAKRASIM 476

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIV   SDVFM SHGGNMG A+QGHRAY GH+K I PNKR ML YF ++S++ETE 
Sbjct: 477 AAIDYIVCKESDVFMASHGGNMGHAIQGHRAYEGHKKIITPNKRHMLPYFVNSSLTETEF 536

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMC 161
             +++KLH+  +G+PE R  +  RD+  YP+PECMC
Sbjct: 537 EKMIKKLHRQSLGQPELRISKAGRDVTKYPVPECMC 572

[Close]

BLAST of Csa1G050320 vs. TAIR10
Match: AT2G44500.1 (AT2G44500.1 O-fucosyltransferase family protein)

HSP 1 Score: 199.1 bits (505), Expect = 2.1e-51
Identity = 93/156 (59.62%), Postives = 113/156 (72.44%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKAL APK ARIY AGGEP GGK+ L+PL  EFP    K+ L+  GEL PF NK+S M
Sbjct: 406 RLLKALEAPKDARIYWAGGEPLGGKEVLEPLTKEFPQFYNKHDLALPGELEPFANKASVM 465

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIV   SDVF+PSHGGNMG A+QG RAY GH+KYI PNKR ML YF ++S+ E++ 
Sbjct: 466 AAIDYIVCEKSDVFIPSHGGNMGHALQGQRAYAGHKKYITPNKRQMLPYFMNSSLPESDF 525

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMC 161
             IV+ LH+  +G+PE R  +  +D+  +P+PECMC
Sbjct: 526 NRIVKDLHRESLGQPELRMSKAGKDVTKHPVPECMC 561

[Close]

BLAST of Csa1G050320 vs. TAIR10
Match: AT1G22460.1 (AT1G22460.1 O-fucosyltransferase family protein)

HSP 1 Score: 122.1 bits (305), Expect = 3.2e-28
Identity = 66/171 (38.60%), Postives = 96/171 (56.14%), Query Frame = 1


Query: 6   LLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAMA 65
           LL ALG      +Y A GE +GG+  L  L + F  +++K  L+   EL  F+N S+ MA
Sbjct: 388 LLTALGYSSDTPVYIAAGEIYGGESRLADLRSRFSMLMSKEKLATREELKTFMNHSTQMA 447

Query: 66  AIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFD----DASISE 125
           A+DYIVS+ SDVF+PS+ GNM RA++GHR ++GHRK I P+++A++   D     A    
Sbjct: 448 ALDYIVSIESDVFIPSYSGNMARAVEGHRRFLGHRKTISPDRKAIVRLVDRIGRGAEKDN 507

Query: 126 TELGTIVRKLHKGCMGKPERR------TK-----RKDRDIIAYPMPECMCQ 162
            ++   + ++HK   G P RR      TK     R +      P+P+C+CQ
Sbjct: 508 RKVYERINEIHKTRQGSPRRRKGPASGTKGLERHRSEESFYENPLPDCLCQ 558

[Close]

BLAST of Csa1G050320 vs. TAIR10
Match: AT5G64600.1 (AT5G64600.1 O-fucosyltransferase family protein)

HSP 1 Score: 121.7 bits (304), Expect = 4.2e-28
Identity = 66/171 (38.60%), Postives = 95/171 (55.56%), Query Frame = 1


Query: 7   LKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAMAA 66
           LK LG  +   IY A GE +GG   L  L + FPN+V K TL+   EL  F   ++  AA
Sbjct: 346 LKGLGYSQSTVIYIAAGEIYGGDDRLSELKSRFPNLVFKETLAGNEELKGFTGHATKTAA 405

Query: 67  IDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYF---DDASISE-T 126
           +DYI+S+ SDVF+PSH GNM RA++GHR ++GHR+ I P+++ +++ F   +   + E  
Sbjct: 406 LDYIISVESDVFVPSHSGNMARAVEGHRRFLGHRRTITPDRKGLVKLFVKMERGQLKEGP 465

Query: 127 ELGTIVRKLHKGCMGKPERRTK-----------RKDRDIIAYPMPECMCQS 163
           +L   V ++HK   G P RR             R +      P PEC+C S
Sbjct: 466 KLSNFVNQMHKDRQGAPRRRKGPTQGIKGRARFRTEEAFYENPYPECICSS 516

[Close]

BLAST of Csa1G050320 vs. NCBI nr
Match: gi|700209297|gb|KGN64393.1| (hypothetical protein Csa_1G050320 [Cucumis sativus])

HSP 1 Score: 330.1 bits (845), Expect = 2.2e-87
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 1


Query: 1   MIKNRLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINK 60
           MIKNRLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINK
Sbjct: 1   MIKNRLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINK 60

Query: 61  SSAMAAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASIS 120
           SSAMAAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASIS
Sbjct: 61  SSAMAAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASIS 120

Query: 121 ETELGTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 163
           ETELGTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS
Sbjct: 121 ETELGTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 162

[Close]

BLAST of Csa1G050320 vs. NCBI nr
Match: gi|778658049|ref|XP_011652019.1| (PREDICTED: uncharacterized protein At1g04910 [Cucumis sativus])

HSP 1 Score: 322.4 bits (825), Expect = 4.6e-85
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM
Sbjct: 399 RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 458

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL
Sbjct: 459 AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 518

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 163
           GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS
Sbjct: 519 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 556

[Close]

BLAST of Csa1G050320 vs. NCBI nr
Match: gi|307136106|gb|ADN33952.1| (hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 318.2 bits (814), Expect = 8.6e-84
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM
Sbjct: 308 RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 367

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL
Sbjct: 368 AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 427

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 163
           GTIVRKLHKGCMG+PE RTKRKDRDIIAYPMPECMCQS
Sbjct: 428 GTIVRKLHKGCMGQPEPRTKRKDRDIIAYPMPECMCQS 465

[Close]

BLAST of Csa1G050320 vs. NCBI nr
Match: gi|659067449|ref|XP_008439494.1| (PREDICTED: uncharacterized protein At1g04910 [Cucumis melo])

HSP 1 Score: 318.2 bits (814), Expect = 8.6e-84
Identity = 156/158 (98.73%), Postives = 157/158 (99.37%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM
Sbjct: 434 RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 493

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL
Sbjct: 494 AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 553

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQS 163
           GTIVRKLHKGCMG+PE RTKRKDRDIIAYPMPECMCQS
Sbjct: 554 GTIVRKLHKGCMGQPEPRTKRKDRDIIAYPMPECMCQS 591

[Close]

BLAST of Csa1G050320 vs. NCBI nr
Match: gi|703123732|ref|XP_010102888.1| (hypothetical protein L484_002686 [Morus notabilis])

HSP 1 Score: 255.4 bits (651), Expect = 6.8e-65
Identity = 121/157 (77.07%), Postives = 138/157 (87.90%), Query Frame = 1


Query: 5   RLLKALGAPKQARIYTAGGEPFGGKKALQPLIAEFPNIVTKYTLSREGELSPFINKSSAM 64
           RLLKALGAP+  RIY AGGEPFGG KALQPLIAEFPN+VTK  L+R+GELSPF NKSSA+
Sbjct: 374 RLLKALGAPRTTRIYNAGGEPFGGSKALQPLIAEFPNLVTKEMLARDGELSPFANKSSAL 433

Query: 65  AAIDYIVSLSSDVFMPSHGGNMGRAMQGHRAYVGHRKYIKPNKRAMLEYFDDASISETEL 124
           AAIDYIVSLSSDVF+PSHGGNMGRA+QGHRAYVGHRKYIKPNKRAML +F+DAS+S+ E 
Sbjct: 434 AAIDYIVSLSSDVFVPSHGGNMGRALQGHRAYVGHRKYIKPNKRAMLPFFEDASVSDAEF 493

Query: 125 GTIVRKLHKGCMGKPERRTKRKDRDIIAYPMPECMCQ 162
            TI+R+LH    G+PE R  R DRD+IAYP+PECMC+
Sbjct: 494 STIMRELHSKSQGQPELRNFRIDRDVIAYPVPECMCK 530

The following BLAST results are available for this feature:

BLAST of Csa1G050320 vs. Swiss-Prot


Match Name	E-value	Identity	Description
Y1491_ARATH	4.7e-13	31.10	Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1	[more]

BLAST of Csa1G050320 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRH6_CUCSA	1.5e-87	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050320 PE=4 SV=1	[more]
E5GBV3_CUCME	6.0e-84	98.73	Putative uncharacterized protein OS=Cucumis melo subsp. melo PE=4 SV=1	[more]
W9RV13_9ROSA	4.8e-65	77.07	Uncharacterized protein OS=Morus notabilis GN=L484_002686 PE=4 SV=1	[more]
M5WX01_PRUPE	1.7e-62	73.89	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa022449mg PE=4 SV=1	[more]
A0A0J8CGH2_BETVU	4.9e-62	72.15	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110530 PE=4 S...	[more]

BLAST of Csa1G050320 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G63390.1	2.7e-59	67.52	O-fucosyltransferase family protein	[more]
AT3G07900.1	9.2e-52	59.62	O-fucosyltransferase family protein	[more]
AT2G44500.1	2.1e-51	59.62	O-fucosyltransferase family protein	[more]
AT1G22460.1	3.2e-28	38.60	O-fucosyltransferase family protein	[more]
AT5G64600.1	4.2e-28	38.60	O-fucosyltransferase family protein	[more]

BLAST of Csa1G050320 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700209297\|gb\|KGN64393.1\|	2.2e-87	100.00	hypothetical protein Csa_1G050320 [Cucumis sativus]	[more]
gi\|778658049\|ref\|XP_011652019.1\|	4.6e-85	100.00	PREDICTED: uncharacterized protein At1g04910 [Cucumis sativus]	[more]
gi\|307136106\|gb\|ADN33952.1\|	8.6e-84	98.73	hypothetical protein [Cucumis melo subsp. melo]	[more]
gi\|659067449\|ref\|XP_008439494.1\|	8.6e-84	98.73	PREDICTED: uncharacterized protein At1g04910 [Cucumis melo]	[more]
gi\|703123732\|ref\|XP_010102888.1\|	6.8e-65	77.07	hypothetical protein L484_002686 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR019378	GDP-Fuc_O-FucTrfase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
biological_process	GO:0006004	fucose metabolic process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0016757	transferase activity, transferring glycosyl groups

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G050320.1	Csa1G050320.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019378	GDP-fucose protein O-fucosyltransferase	PFAM	PF10250	O-FucT	coord: 3..96 score: 3.6
None	No IPR available	PANTHER	PTHR31741	FAMILY NOT NAMED	coord: 5..161 score: 3.0E
None	No IPR available	PANTHER	PTHR31741:SF10	AUXIN-INDEPENDENT GROWTH PROMOTER-LIKE PROTEIN	coord: 5..161 score: 3.0E

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G050320	Cla002606	Watermelon (97103) v1	cuwmB008
Csa1G050320	MELO3C002348	Melon (DHL92) v3.5.1	cumeB027
Csa1G050320	ClCG03G003630	Watermelon (Charleston Gray)	cuwcgB035
Csa1G050320	Lsi02G004880	Bottle gourd (USVL1VR-Ls)	culsiB022
Csa1G050320	MELO3C002348.2	Melon (DHL92) v3.6.1	cumedB022
Csa1G050320	Cla97C03G054740	Watermelon (97103) v2	cuwmbB032
Csa1G050320	Bhi08G001212	Wax gourd	cuwgoB032
Csa1G050320	CSPI01G09380	Wild cucumber (PI 183967)	cpicuB000
Csa1G050320	Cucsa.391940	Cucumber (Gy14) v1	cgycuB547
Csa1G050320	CmaCh13G007940	Cucurbita maxima (Rimu)	cmacuB204
Csa1G050320	CmoCh13G008270	Cucurbita moschata (Rifu)	cmocuB189
Csa1G050320	Cp4.1LG20g03150	Cucurbita pepo (Zucchini)	cpecuB515
Csa1G050320	CsGy1G009430	Cucumber (Gy14) v2	cgybcuB001
Csa1G050320	Carg07591	Silver-seed gourd	carcuB1017

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G050320	Bottle gourd (USVL1VR-Ls)	culsiB067
Csa1G050320	Cucumber (Gy14) v2	cgybcuB012
Csa1G050320	Melon (DHL92) v3.6.1	cumedB043
Csa1G050320	Silver-seed gourd	carcuB0393
Csa1G050320	Silver-seed gourd	carcuB0523
Csa1G050320	Watermelon (97103) v2	cuwmbB076
Csa1G050320	Cucumber (Chinese Long) v2	cucuB002
Csa1G050320	Cucumber (Gy14) v1	cgycuB225
Csa1G050320	Cucurbita maxima (Rimu)	cmacuB071
Csa1G050320	Cucurbita maxima (Rimu)	cmacuB112
Csa1G050320	Cucurbita maxima (Rimu)	cmacuB390
Csa1G050320	Cucurbita moschata (Rifu)	cmocuB061
Csa1G050320	Cucurbita moschata (Rifu)	cmocuB098
Csa1G050320	Cucurbita moschata (Rifu)	cmocuB380
Csa1G050320	Melon (DHL92) v3.5.1	cumeB051
Csa1G050320	Watermelon (Charleston Gray)	cuwcgB075
Csa1G050320	Watermelon (Charleston Gray)	cuwcgB089
Csa1G050320	Watermelon (97103) v1	cuwmB088
Csa1G050320	Cucurbita pepo (Zucchini)	cpecuB029
Csa1G050320	Cucurbita pepo (Zucchini)	cpecuB359
Csa1G050320	Cucurbita pepo (Zucchini)	cpecuB648