Csa1G046020 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: five_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAAGTAAAAAAAAGCCACAAAAATCCTCCATTTTCTAAAAAGGAAAATCCATCGCATCGATCAAACTTCGTCAACGAATCGATGGTGGGCAATTAGCATTTGCGAACTCTAAACGAAAATGAAAGATAAGGCTGAGACTAAAGGAATCTCCATCAACGATTTTTTCCCAACACGTCGCCGCCTCCGCCGCAGCCGTCGGCTAAAATGTACGCTTTGTCCTCCGTTCCAATCGCAGCCCTTCCATGCTCACGCTTGCTTCAGCCTCCATTGAAGCCATCCGCATGCTTTCAAACTTTTTTCAACCGCCGCCATCTGATTACGACTCTACTCTCTGTCTTCACTCCTTCTTTTATCGATTTTACTCTGCCCTGTTCTTCTGATTTGGTTGCTGAAGCTCGTGGGTTGTTTCAAATGCCCCCTGTTCGTCTTGTCAATCGGTAATTTCACTAACCCAGTTTTTTTTTCCCCATTTTAGTTGGCTTTTGGAGATGATGATAAAGGGGTTTGAGTATTGATTGAACCCCTAGTGGATACACTGAAAATTTTTCGTGCTGATGCTGATAGTCATCCAATTTTTTTCTTTCAAATTTGTGTTTGTTATGGGGATGAGAAGGTACTTTCTGGTGAGAGCAGGGGAGTCTGAATTTGATAGTTTTGGAATAATTAACACAAACCCAGTTGCAAAGACATCTGTTGATAGTGGATTGTCTGAGGAAGGGAAGAAGCAAACTGTTAAAGCAGCTTTTAAGTTGAAGGAAATGGGAGCTTGTGAAAATGGTTGCTGGATTTGGCCCTCTATTACTCAGCGAGCTTATCAAGCAGCAGAGATTATTGCTTCAGTTAATGGTGTGAATCGAAGGTATGTCAATTGATATTTTGGGAAACTTACTCGACTTTTACCTCTGTCTTCAACATTGATGTTCATGCCATCATGGAATCAGACTTTTTTTCTTTCTTTCCTTTTGGCTTGTTTGAAACAGCAAATCTCTTGGTCAAGTAACACATTTGTATGCTAGTTGAGCTATAGTGACTTTAGGATATACTTTGTTATGGCAGTAAGATAATTGTCTAATCAAATTATCCTCAATTATAGCTTGTTGATGACAAAGGAGATTTCCCATTTCACTCTCTCCATCTTAGTGTGAAAATCCTGATGTGTTTTTCTAATTCAAACCATATTTGTCGTTTCTTTGCACATTCCTCTTTGTTTCTCGACTGCTTGATGTTTTTGGTTGGTCCATGGTTTTTCCAAACAACATTTCCAGTATTCTAGATTTATTTGTGTGGGCCATCCTTTCCATGGTGTGAAAAAGGACTTTTTAGCTTGCTATTATAAACCGAGGATGTCTTTGGTGGAAGAAAGTTTTTTGTGTCGCCATTTTCTCAAATTTGAAAGTTTTTTGGATTGGTGTAAACATAATCGTTCTTTCTTCTTTGATTTCTAATTGGAGAGCTTTATTGGGATTTACCTATTGGTGTCAGAGTTCTCTAAGCTCCTTTTACTTCAGGCATCAATAAAAATTGTCACTCATCCAAAACAAGACTTGCTTGAAATGAATAGTTAGTTTAGCCTTCGTTTGGTAATACTTGATTCTTGTGTTTTTTTTGGTACATTTTGAAAAACAAGTCAAAATTTGAAAACTAAAAATAGCAATTTTCAAAAACTTAGTTTTTGTTTTTAAAAGTTGACTAAGAATTCAAGGTTTCCTTTCAAAATTGTTAAAATCACATTACGGATACAGTTAGCAAACATAAATTCAAAAAAGAAAATACTAAATACAAAAGCCTCACCGAATGAGGTCTTAGCCATTCCATTGACAAAATAACAATTCACGGTTGCTATGATTTAGTAAGCAAATGTATGGTGTAGGAAAGTGAACGTTTCATTCCCTCAAAGCTTGATTCTGTTGTTTCTCTGATTGTTATCTTCTGTTGAATGGAAAATCTTTGACTTATCAAATTTCTTCTGTTGGTTTCAGTTACATAGTTCCTGAATACAGTTTTCTTGATGCCCGTGGGCTTGGAGCTTATGAAGGCAAAAGATTGGATTCTATGTCAGAAGTATGGTTTCTTTCAATCTTTTGTTAAGAGTTCGACAGTTGGTATGATTGTTTGATTTAGCAAGTCTTCGTTTTCCTCAAAACGCTTCTTGCTCAAAGTGAATGGATTTTAAAGAATGAGCAAGAAATGAGACAACTCTTTCTTGAACTATTAACATAAACAGGCCTTCCTTTTTAGGCAAATTTTACTACTGTTTTGCTTGAAATTTCTGTCTAGAGATAGTGAGTTGTTTCATTGCCCTTATGAAATGTGTTTGTAAACAACAGGTATATGCTTCAGATACAATCTCATCAATTTTCAAACCTCCTCCAACAGATGATGGCACCCCAAACGAGAGCGTATCTGACGTCTTCGTTCGTGTAACACAACTGATGTCGATTCTCGAAACCCAATACTCTGGTGATACTATCATTATTGTCTCACCAGATTCTGATAATTTGACCGTTCTTCAAGCTGGTCTAATCGGTCTTGACTTGCGAAGGTAACTGCATTTCCAAAGCTATGCTCTCATAAGCATGATTTCTTTTCATTTGTTTAATAATCCAAACCTTCTTTTTGTCTTGAGTTCAGGCACCATGATCTTTCCTTTGCTCCTGGGGAGGTACGCTTTGTTGACATACGCAGCATCCCTTCCTATAAGCAACCACCGTCAGCTGTATATAAATGTTTAAACCCTCCTAATTGTAATTGACATAGAATGCTTGTATATATTGGCTATGAAATTATCACAAAGCCTATGATTCTGATGAAGCAATAGTGTTCATTCATTGTCATCTTCAAACAGCTCAATTGTATAGTTGCTGTATCTCAGTTTTCTAACCTGGAATTTAAACAAGTCAAGC ATGTACGCTTTGTCCTCCGTTCCAATCGCAGCCCTTCCATGCTCACGCTTGCTTCAGCCTCCATTGAAGCCATCCGCATGCTTTCAAACTTTTTTCAACCGCCGCCATCTGATTACGACTCTACTCTCTGTCTTCACTCCTTCTTTTATCGATTTTACTCTGCCCTGTTCTTCTGATTTGGTTGCTGAAGCTCGTGGGTTGTTTCAAATGCCCCCTGTTCGTCTTGTCAATCGGTACTTTCTGGTGAGAGCAGGGGAGTCTGAATTTGATAGTTTTGGAATAATTAACACAAACCCAGTTGCAAAGACATCTGTTGATAGTGGATTGTCTGAGGAAGGGAAGAAGCAAACTGTTAAAGCAGCTTTTAAGTTGAAGGAAATGGGAGCTTGTGAAAATGGTTGCTGGATTTGGCCCTCTATTACTCAGCGAGCTTATCAAGCAGCAGAGATTATTGCTTCAGTTAATGGTGTGAATCGAAGTTACATAGTTCCTGAATACAGTTTTCTTGATGCCCGTGGGCTTGGAGCTTATGAAGGCAAAAGATTGGATTCTATGTCAGAAGTATATGCTTCAGATACAATCTCATCAATTTTCAAACCTCCTCCAACAGATGATGGCACCCCAAACGAGAGCGTATCTGACGTCTTCGTTCGTGTAACACAACTGATGTCGATTCTCGAAACCCAATACTCTGGTGATACTATCATTATTGTCTCACCAGATTCTGATAATTTGACCGTTCTTCAAGCTGGTCTAATCGGTCTTGACTTGCGAAGGCACCATGATCTTTCCTTTGCTCCTGGGGAGGTACGCTTTGTTGACATACGCAGCATCCCTTCCTATAAGCAACCACCGTCAGCTGTATATAAATGTTTAAACCCTCCTAATTGTAATTGA ATGTACGCTTTGTCCTCCGTTCCAATCGCAGCCCTTCCATGCTCACGCTTGCTTCAGCCTCCATTGAAGCCATCCGCATGCTTTCAAACTTTTTTCAACCGCCGCCATCTGATTACGACTCTACTCTCTGTCTTCACTCCTTCTTTTATCGATTTTACTCTGCCCTGTTCTTCTGATTTGGTTGCTGAAGCTCGTGGGTTGTTTCAAATGCCCCCTGTTCGTCTTGTCAATCGGTACTTTCTGGTGAGAGCAGGGGAGTCTGAATTTGATAGTTTTGGAATAATTAACACAAACCCAGTTGCAAAGACATCTGTTGATAGTGGATTGTCTGAGGAAGGGAAGAAGCAAACTGTTAAAGCAGCTTTTAAGTTGAAGGAAATGGGAGCTTGTGAAAATGGTTGCTGGATTTGGCCCTCTATTACTCAGCGAGCTTATCAAGCAGCAGAGATTATTGCTTCAGTTAATGGTGTGAATCGAAGTTACATAGTTCCTGAATACAGTTTTCTTGATGCCCGTGGGCTTGGAGCTTATGAAGGCAAAAGATTGGATTCTATGTCAGAAGTATATGCTTCAGATACAATCTCATCAATTTTCAAACCTCCTCCAACAGATGATGGCACCCCAAACGAGAGCGTATCTGACGTCTTCGTTCGTGTAACACAACTGATGTCGATTCTCGAAACCCAATACTCTGGTGATACTATCATTATTGTCTCACCAGATTCTGATAATTTGACCGTTCTTCAAGCTGGTCTAATCGGTCTTGACTTGCGAAGGCACCATGATCTTTCCTTTGCTCCTGGGGAGGTACGCTTTGTTGACATACGCAGCATCCCTTCCTATAAGCAACCACCGTCAGCTGTATATAAATGTTTAAACCCTCCTAATTGTAATTGA MYALSSVPIAALPCSRLLQPPLKPSACFQTFFNRRHLITTLLSVFTPSFIDFTLPCSSDLVAEARGLFQMPPVRLVNRYFLVRAGESEFDSFGIINTNPVAKTSVDSGLSEEGKKQTVKAAFKLKEMGACENGCWIWPSITQRAYQAAEIIASVNGVNRSYIVPEYSFLDARGLGAYEGKRLDSMSEVYASDTISSIFKPPPTDDGTPNESVSDVFVRVTQLMSILETQYSGDTIIIVSPDSDNLTVLQAGLIGLDLRRHHDLSFAPGEVRFVDIRSIPSYKQPPSAVYKCLNPPNCN*
BLAST of Csa1G046020 vs. TrEMBL
Match: A0A0A0LTH1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G046020 PE=4 SV=1) HSP 1 Score: 599.4 bits (1544), Expect = 2.5e-168 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Csa1G046020 vs. TrEMBL
Match: W9S3T4_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_015003 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 4.3e-120 Identity = 228/299 (76.25%), Postives = 248/299 (82.94%), Query Frame = 1
BLAST of Csa1G046020 vs. TrEMBL
Match: A0A151SNE7_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_002540 PE=4 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 6.4e-116 Identity = 220/287 (76.66%), Postives = 238/287 (82.93%), Query Frame = 1
BLAST of Csa1G046020 vs. TrEMBL
Match: M5WY25_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009214mg PE=4 SV=1) HSP 1 Score: 424.9 bits (1091), Expect = 8.3e-116 Identity = 210/268 (78.36%), Postives = 234/268 (87.31%), Query Frame = 1
BLAST of Csa1G046020 vs. TrEMBL
Match: A0A061FTK9_THECC (Phosphoglycerate mutase family protein isoform 1 OS=Theobroma cacao GN=TCM_012047 PE=4 SV=1) HSP 1 Score: 422.9 bits (1086), Expect = 3.2e-115 Identity = 212/266 (79.70%), Postives = 234/266 (87.97%), Query Frame = 1
BLAST of Csa1G046020 vs. TAIR10
Match: AT5G62840.1 (AT5G62840.1 Phosphoglycerate mutase family protein) HSP 1 Score: 392.1 bits (1006), Expect = 3.0e-109 Identity = 208/304 (68.42%), Postives = 237/304 (77.96%), Query Frame = 1
BLAST of Csa1G046020 vs. NCBI nr
Match: gi|449469527|ref|XP_004152471.1| (PREDICTED: uncharacterized protein LOC101222124 [Cucumis sativus]) HSP 1 Score: 599.4 bits (1544), Expect = 3.5e-168 Identity = 298/298 (100.00%), Postives = 298/298 (100.00%), Query Frame = 1
BLAST of Csa1G046020 vs. NCBI nr
Match: gi|659067221|ref|XP_008438298.1| (PREDICTED: uncharacterized protein LOC103483447 [Cucumis melo]) HSP 1 Score: 566.6 bits (1459), Expect = 2.5e-158 Identity = 284/299 (94.98%), Postives = 288/299 (96.32%), Query Frame = 1
BLAST of Csa1G046020 vs. NCBI nr
Match: gi|703116715|ref|XP_010101199.1| (hypothetical protein L484_015003 [Morus notabilis]) HSP 1 Score: 439.1 bits (1128), Expect = 6.1e-120 Identity = 228/299 (76.25%), Postives = 248/299 (82.94%), Query Frame = 1
BLAST of Csa1G046020 vs. NCBI nr
Match: gi|1009176091|ref|XP_015869245.1| (PREDICTED: uncharacterized protein LOC107406618 [Ziziphus jujuba]) HSP 1 Score: 426.0 bits (1094), Expect = 5.4e-116 Identity = 219/283 (77.39%), Postives = 241/283 (85.16%), Query Frame = 1
BLAST of Csa1G046020 vs. NCBI nr
Match: gi|1012345111|gb|KYP56303.1| (hypothetical protein KK1_002540 [Cajanus cajan]) HSP 1 Score: 425.2 bits (1092), Expect = 9.2e-116 Identity = 220/287 (76.66%), Postives = 238/287 (82.93%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |