Csa1G043300 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGGCTACGTTTGTTCCTTTTTGTTCGAACTTTACACTAAAACTCCGCCCTTCTAATCCCCCTTCGATCCTTGCACCTCTACGCAAAAATCAGAGAGGCGCGAAGTTGAAATGTTTCGGTGTTGCGAGGCCTCATATTCTGCCTTCCGCATTCGGAGAAGACGGTGGCCTGCGAGTCTTTGTGCTCTCTGATCTACATACGGATTACGACGAAAATATGAACTGGATTCACTCCTTGTCATTGGACAAATATAGAGACGATGTTCTTATTGTCCCCGGAGATGTAGCCGAGACGATAAGTAATTTTGTTTCGACAATGGCTATGTTGAAGGATAGATTTGAGCGCGTCTTCTTTGTGCCTGGGAATCATGATCTGTGGTGCCGTCGGGAGGAAGACAATTATGTAAGTGGTTGGAGGTTAGGTTTCGTGCTGTAAGCTCTCTCGTAATTTCTTAGTTTTTATATTTTTAGGATGACTTACCAGTTTTGAAGCATCTATACATTGTGATTTTCATTAGATTTTCCTTCTTAGCTATTTCATTACACGCTTTCTTTTTTTCAGCTCGATTCTATTGAGAAGATGAGTAAACTTCTTGATGCGTGTAGAGATCTTGGAGTTGATACCAATCCGGCAATCTTGAACGGATTGGGAATAGTTCCGTTGTTCTCTTGGTATCACGAGGTGGGTGATTGACTGTTACTTTCTCTTTGTAGCTTTCAGTTCTAGTGATATTAATGCTCATCCTTGTGCGTTATTTGATGTTTTTGCATCAGAGTTTTGACAGAGAAATGGACTTACAGGGTATCCGCATTCCATCTCTGGAGATGGTGATTCACTTTCTTTTCCCTAGTAAGAGTCTTTAGATCTAGTTTTAATATCAGGTTTTTTCTGTATCTATAACGCCTTTGGTATAGTTTCATGTTAATCTTTTTATTTATTATTCAAGGTTCTTGCAATGGTCTCATTGGATTTTTGTTTTCTTTTGAATAATACATATAGAAAATGGAAATGGAAATGAAATTAGTTCTTCGTATCATGGAGAACTAATTCCATTTCCAGAGCTCTAATTTGTTTGCCTTTTGTCCTCCATCCCTTTTAATTTTTGCATTTTGAATGTCTTTTTTGGTTCGTTTGATGTGGGCTGCATCTTTTCAACTTGTCTGTGTATTTATTTCAAGATTCCTGTTTCTTTGATTTCTCATGGAATGTTACCTTGAGCAATGATCAAAACTTGTGTTGGTGGAATAAGGAGTTTTCTCTCTTCTACAGTTGAGCTTTGAAATTTCAATGTTTTGTACCTATAGCTTGCTGGCAACTTCCATTTCGTTTCTCATTATAATATCTGCTGTGATAAAATTTTATTGAGTGAACAATTCTCCCAATTAGTTACTTTATTGTAGATGTTCACGCATGGTAGTTATATTATTTGTGTTTGAAGAAGGCTCGAGATTATTGTTGTGTCTTCGTACTGTTTTTTAATCCTTTTACACGAAATTTTATTTTGGTTATTTTTGCAACTTCATTTTCTTATTTGAATCCGTTGATTTGAAAATGAAAACTCGTGGAATTGGACCAATTGGTTTTAAATGGCTAATGGCAGGTATGTAAAGACTTCCATGCATGTAAATGGCCCGGAGATCTTTCAAATGAAGGTGCTTCACTAGCATTGTTCTTTGATGCAATGAATGAAAAGAATAATATAATGATCGAGAAGATTCGAAGAACCTGCAGTCAGATAATTACATTTTCTCACTTTGTTCCCAGGTCAGTAAATATACGTGCGCAAACACCCAACTCATTAATTGTGTTTTACAAACTGATTCTCATATCACGGTCTTCTATGGAGAGCATTTGGTGCATCTTTTATATGTTGTTAAATTATGGATCGTTTATGTCAATAGACAGTGTTCAATTTGCATGTCGTATGCTGTTGCCTTGGAAATGCAATTATTTAATCGAGGTATTTGGTCCACACTTTATTGTTGCATATAAAGTAGCAACAAGTGTGATGATTCATTTATGGCACTTAGATTCTTAAATGAAGTTGGATTTACATTCTTTCTCCTGAACCCAATCAAACACTGACTCAAACCAGAGGGCAAGTTTGGATTACTTCTTCTTTTTTAGAATTTTGATAACTGCCAATTATATTAAATAACAGGGGTATAGGAGGACCCCACTCCATGGATTATGTTCATTATGTATATGTTCATGTCCCATTCCAATTAACCTTTGGAAGAGAAAGTTCGCCGATCCAAAGCTAGCTTCTAGGGTTAAAATAATGAAGTTATTAAATCCACGATCTTGGAGCTTATCACTAAACATCCTATACTCTTACCACTAGGATCGCTTCTTAATCACGGGAAAGCATGGCTACTGAAACGTTTGACGAAGTCAAGCATATGATGATTTATGACTTTTTTATCAATAGCTTCTTTGTGTTTGTCATTTTTGTTAATATAATGATGTGCTTTGCTTGTTGTGTTCATAGGCCAGAGCTATGTCCAGAAAAGAGGATGCTATTCTACCCAAAACTCCCTAAAATCATTGGCTCAGATTATCTCGAGGATCGTATAAGATCAATACACGGGAGTAAAGAAACAACATCAGCATGTCATGTGTTTGGTCATACCCATTTCTGCTGGGATCTAGTACTTGATGGCATCAGGTAATGTTAAATCATTTCACTTCACTTGCAAAATGCAAAATTTTTCCTTGACCTTCGAGTTCAAATTTTAGAGCATGAAAAGGAGTAGAAGACAATGAATTCTTCTCATTGTGTGACCCTTTTTATACGCATGAACTTGTGCTTATATGTTTGATCATAAGAAGATTGCTGAGATGCTTTATTTTCAGGTATGTCCAGGCGCCATTGGCTTATCCCAGAGAACGCAAGAAAAGGATGAATGGCGGTGAAGATTGGCTTCCTTTTTGCATTTTTTCCAACGGAAGGTTCGCTCATAAACTCACCCCTTGTTACTGGTCTGATTATTATGCATCCAATCCAAGATCACCTCACAACACCCAACTTGCTCCTTGGGTTGCCAAATACTATAAAATGAAATGAAAGAACTGTTCAGGTTCAATCCTATTTTTGTATATTTTTTTTGCGTTTATTGTTTTAGTATACGTACTGTCATAAGTCATGTTGTTCTTTTGTACGTCGGTTTTGGTTTCATTTTCTCCTTGTTTATCCTTTTTTCCTTTCACAATTTCAGATATATATAATTCATTTTTTACAGAGATGACTATATTTTAGTTTATAATTCGTGTCAATAGTATTAAGGACCAAAATGAATATGGAGAGCAAAGACAAAAGATTGAAGGACCATTTTTGGTTTGTCTTGAAATTACAGGAAATGAAATGTCAACTTACGAGGACGACAAGGATATGGATTAAGGGCAAAACTTTGGACCTATTCATGGTATTTCCATAACCTAATCCAACTCTTTTGTCTCTGTTGTGAAATTTATTGAATTCTCCGTTTGAAAATGTCACCGTATTTGGATTTATAAAAAATATAGGGGGTAACCTTTAAGATCGAACCTTGACCTTATCACAAATGGATTTAAAAAGGAAAAGAAAAGAAAACATCACCTTAGAATTTAAGAAAAGATAAAGATGTAAGCTGTATGACATTTATTACCTTCATGAACATAAACACCACAAATAAACCCCAAACGGAGACAACAAACCACCCTTGGCCAACAAAAGGCTTCGAGTCTTTTCCAAAGAAGAAAAAAAAACCCTACAACATATAGAGCAGAAAAACAGTCTCACATCCAAAACACACATTCGAATATGTTTTTACAAATTAAAAAAAAAAAAAAAAAAAACTCAGTAATCCTCGGGAGCCAAGGGCTGGTGAGTATGTAGAGGAGGTTCAACGGGAATGACCAAGTACTCATATACAAGGGCCGCAAGCCCACCTCCGATTAATGGGCCAATCCAATAGATCCAATGATTGTCCCATCTCCAGCCCACTAAAGAAGGCCCAAATGCCCTTGCTGGGTTCATGCAGGCCCCATCGAAGGCCCCACCCACCAGAATATTGGCCCCGACTATTAACCCGATTGCCAGTGGTGCTATTGTTCCCAAACTGCCCCTCTTTGGGTCTATTGCTGTTGCGTAAACTGTGTAGACCAATGCAAATGTAAGGATTATCTCTAGTAGAAACCCGTGCAATTCCGATACTCCTGATGAAACAAAGAACCCCATAGGCCTCTGCAATTTGACAAAAAAAAAAAAAAAAAGAGATGATAAAATAAACAAAGGAAGTAAGGACGTTAAAGGAAAGTAAAAATTAGGGATGGATATCTTGAGCGCCTCTACTAGAAACAATAATCTAAAAGGGTTATGAAGCATGGCATGAGAGACTTAGATGGAAGCCTCTTAGTTTTTAAAAATTAAGCACATTTTCCTCAATTGCTTTGAATGCTTAGCCAAAATTTTGGAGCTCTTTTCTTACGTTTACAGAACTTAGATGGTGAAACCAGAGAGAGTCAGTTTGAGTATGCACGAAATTGTGGAATTAAAAGTTAAATGAAAAAAAAAATAAAAACATTTCTTTTTTCTTCCTTCTTAAAAGTTTGATTAGATACTTCGGAAACATACACAAAAGTTATATGTGTACTTTAAAATAATAATGAGTTCAAGATCTTTAGTATTTTGTTTTTTTTTTCTTAACCTTTTTTATTCTTGAATCTTCATATAATTGTGAAAAAAGAAAAAAAAAATTAAAGGCTACATTTTCTAAAGCATTAGTTATATGTGAGTGTTTTTCTTTTACCATGCCACCCGTTGCAAGTCTCAAGAGAAGTGAAGCGATAATGGCACCCAAAATCTGTGCAACCCAATAGAAGAATGCACGAATAAGAGATATCCTCCCTCCGATAAGGGCCCCAAAAGTTACTGCAGGATTCACATGCCCACCCGATATGTTGATGCTCGCTGCCACCGCCGAGAACAGCGCAAACGCGTGTGCTATCGCTATCACTACTAAATCGGACGCAGCTCTGCCTGTGTCGGTCCCCTTTCTACCATAACCGTGACCATAACTGTACCCTCCTCGGCCGTAACTTCCATGCCCATAACTTCCGTGACCATAACTTCCATAATCCGCTGGCCTGAAAATTTTATCTGCAAAAATGGAAAACCAAGAAATTAATAATCCATCCATTGATCTTGCATGCATGTACTTGAAAATGTTTGTAAAAAAATTTAAAAGAAAATCCTTTCAAATACAATATTGAATTTTTTAATAAGATCAAGTTTGGGCGGTTGCATGTTTGAAAAAAAAAAATCATTTGTCAAATCGTTGTTGATTATTTAAAATTAGTTTATTAGTCAATTTTTTACTTTCAAAATAACTGTAAAACAGTCATACCAAGAGCGAGAACGGAGCCTTCGCCAGCAAAGACGAAGATGAAAGTGGAAATGAACTCAGCTAAGGTAGCACGAATGGAGTCGGGGT ATGGTGGCTACGTTTGTTCCTTTTTGTTCGAACTTTACACTAAAACTCCGCCCTTCTAATCCCCCTTCGATCCTTGCACCTCTACGCAAAAATCAGAGAGGCGCGAAGTTGAAATGTTTCGGTGTTGCGAGGCCTCATATTCTGCCTTCCGCATTCGGAGAAGACGGTGGCCTGCGAGTCTTTGTGCTCTCTGATCTACATACGGATTACGACGAAAATATGAACTGGATTCACTCCTTGTCATTGGACAAATATAGAGACGATGTTCTTATTGTCCCCGGAGATGTAGCCGAGACGATAAGTAATTTTGTTTCGACAATGGCTATGTTGAAGGATAGATTTGAGCGCGTCTTCTTTGTGCCTGGGAATCATGATCTGTGGTGCCGTCGGGAGGAAGACAATTATCTCGATTCTATTGAGAAGATGAGTAAACTTCTTGATGCGTGTAGAGATCTTGGAGTTGATACCAATCCGGCAATCTTGAACGGATTGGGAATAGTTCCGTTGTTCTCTTGGTATCACGAGAGTTTTGACAGAGAAATGGACTTACAGGGTATCCGCATTCCATCTCTGGAGATGGTATGTAAAGACTTCCATGCATGTAAATGGCCCGGAGATCTTTCAAATGAAGGTGCTTCACTAGCATTGTTCTTTGATGCAATGAATGAAAAGAATAATATAATGATCGAGAAGATTCGAAGAACCTGCAGTCAGATAATTACATTTTCTCACTTTGTTCCCAGGCCAGAGCTATGTCCAGAAAAGAGGATGCTATTCTACCCAAAACTCCCTAAAATCATTGGCTCAGATTATCTCGAGGATCGTATAAGATCAATACACGGGAGTAAAGAAACAACATCAGCATGTCATGTGTTTGGTCATACCCATTTCTGCTGGGATCTAGTACTTGATGGCATCAGGTATGTCCAGGCGCCATTGGCTTATCCCAGAGAACGCAAGAAAAGGATGAATGGCGGTGAAGATTGGCTTCCTTTTTGCATTTTTTCCAACGGAAGGAAATGA ATGGTGGCTACGTTTGTTCCTTTTTGTTCGAACTTTACACTAAAACTCCGCCCTTCTAATCCCCCTTCGATCCTTGCACCTCTACGCAAAAATCAGAGAGGCGCGAAGTTGAAATGTTTCGGTGTTGCGAGGCCTCATATTCTGCCTTCCGCATTCGGAGAAGACGGTGGCCTGCGAGTCTTTGTGCTCTCTGATCTACATACGGATTACGACGAAAATATGAACTGGATTCACTCCTTGTCATTGGACAAATATAGAGACGATGTTCTTATTGTCCCCGGAGATGTAGCCGAGACGATAAGTAATTTTGTTTCGACAATGGCTATGTTGAAGGATAGATTTGAGCGCGTCTTCTTTGTGCCTGGGAATCATGATCTGTGGTGCCGTCGGGAGGAAGACAATTATCTCGATTCTATTGAGAAGATGAGTAAACTTCTTGATGCGTGTAGAGATCTTGGAGTTGATACCAATCCGGCAATCTTGAACGGATTGGGAATAGTTCCGTTGTTCTCTTGGTATCACGAGAGTTTTGACAGAGAAATGGACTTACAGGGTATCCGCATTCCATCTCTGGAGATGGTATGTAAAGACTTCCATGCATGTAAATGGCCCGGAGATCTTTCAAATGAAGGTGCTTCACTAGCATTGTTCTTTGATGCAATGAATGAAAAGAATAATATAATGATCGAGAAGATTCGAAGAACCTGCAGTCAGATAATTACATTTTCTCACTTTGTTCCCAGGCCAGAGCTATGTCCAGAAAAGAGGATGCTATTCTACCCAAAACTCCCTAAAATCATTGGCTCAGATTATCTCGAGGATCGTATAAGATCAATACACGGGAGTAAAGAAACAACATCAGCATGTCATGTGTTTGGTCATACCCATTTCTGCTGGGATCTAGTACTTGATGGCATCAGGTATGTCCAGGCGCCATTGGCTTATCCCAGAGAACGCAAGAAAAGGATGAATGGCGGTGAAGATTGGCTTCCTTTTTGCATTTTTTCCAACGGAAGGAAATGA MVATFVPFCSNFTLKLRPSNPPSILAPLRKNQRGAKLKCFGVARPHILPSAFGEDGGLRVFVLSDLHTDYDENMNWIHSLSLDKYRDDVLIVPGDVAETISNFVSTMAMLKDRFERVFFVPGNHDLWCRREEDNYLDSIEKMSKLLDACRDLGVDTNPAILNGLGIVPLFSWYHESFDREMDLQGIRIPSLEMVCKDFHACKWPGDLSNEGASLALFFDAMNEKNNIMIEKIRRTCSQIITFSHFVPRPELCPEKRMLFYPKLPKIIGSDYLEDRIRSIHGSKETTSACHVFGHTHFCWDLVLDGIRYVQAPLAYPRERKKRMNGGEDWLPFCIFSNGRK*
BLAST of Csa1G043300 vs. TrEMBL
Match: A0A0A0LR12_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G043300 PE=4 SV=1) HSP 1 Score: 714.1 bits (1842), Expect = 7.8e-203 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 1
BLAST of Csa1G043300 vs. TrEMBL
Match: U5FHK5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0017s03550g PE=4 SV=1) HSP 1 Score: 474.2 bits (1219), Expect = 1.4e-130 Identity = 229/350 (65.43%), Postives = 266/350 (76.00%), Query Frame = 1
BLAST of Csa1G043300 vs. TrEMBL
Match: A0A061FWD8_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_013436 PE=4 SV=1) HSP 1 Score: 473.4 bits (1217), Expect = 2.3e-130 Identity = 219/310 (70.65%), Postives = 260/310 (83.87%), Query Frame = 1
BLAST of Csa1G043300 vs. TrEMBL
Match: A0A0D2UBV7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_008G293400 PE=4 SV=1) HSP 1 Score: 469.9 bits (1208), Expect = 2.6e-129 Identity = 216/311 (69.45%), Postives = 260/311 (83.60%), Query Frame = 1
BLAST of Csa1G043300 vs. TrEMBL
Match: F6HE74_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_16s0039g00160 PE=4 SV=1) HSP 1 Score: 465.3 bits (1196), Expect = 6.3e-128 Identity = 220/340 (64.71%), Postives = 269/340 (79.12%), Query Frame = 1
BLAST of Csa1G043300 vs. NCBI nr
Match: gi|778657558|ref|XP_011651098.1| (PREDICTED: uncharacterized protein LOC101212697 isoform X2 [Cucumis sativus]) HSP 1 Score: 714.1 bits (1842), Expect = 1.1e-202 Identity = 340/340 (100.00%), Postives = 340/340 (100.00%), Query Frame = 1
BLAST of Csa1G043300 vs. NCBI nr
Match: gi|449439733|ref|XP_004137640.1| (PREDICTED: uncharacterized protein LOC101212697 isoform X1 [Cucumis sativus]) HSP 1 Score: 712.2 bits (1837), Expect = 4.3e-202 Identity = 339/339 (100.00%), Postives = 339/339 (100.00%), Query Frame = 1
BLAST of Csa1G043300 vs. NCBI nr
Match: gi|659067013|ref|XP_008437211.1| (PREDICTED: uncharacterized protein LOC103482705 [Cucumis melo]) HSP 1 Score: 670.6 bits (1729), Expect = 1.4e-189 Identity = 322/339 (94.99%), Postives = 327/339 (96.46%), Query Frame = 1
BLAST of Csa1G043300 vs. NCBI nr
Match: gi|566211149|ref|XP_006372648.1| (hypothetical protein POPTR_0017s03550g [Populus trichocarpa]) HSP 1 Score: 474.2 bits (1219), Expect = 2.0e-130 Identity = 229/350 (65.43%), Postives = 266/350 (76.00%), Query Frame = 1
BLAST of Csa1G043300 vs. NCBI nr
Match: gi|590666858|ref|XP_007037080.1| (Uncharacterized protein isoform 1 [Theobroma cacao]) HSP 1 Score: 473.4 bits (1217), Expect = 3.3e-130 Identity = 219/310 (70.65%), Postives = 260/310 (83.87%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|