Csa1G042140 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G042140
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionSingle-stranded DNA-binding protein; contains IPR000424 (Primosome PriB/single-strand DNA-binding)
LocationChr1 : 4084289 .. 4087319 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ACTTTCTAGGGTTTAAGCCATGCGCTAAACTTCTGAGTTTCTCTACAGATTGCCAATTACGAAGACGATGACCTCCATGGTTGCACTGTCAAGAAGGCTTTGCCGCTCTCTCCTATCGAATTCAAAAGCTTCTCATCATTACGATATCCTCCCAGTAACCTATTGCACTAATAACCTTTCCTTCCGCTCGGTATCAGACATCACTGAGTCCGGTATTGAATCGGACTTGTACACGGAATTGGACTCAAATTCAGTAACTAATCAACCTTCTCTCTCACCGTCCTCGTCCCAATCACCCACCCAACCGAGACCGGTCTATAATCGACCTCTGGAAAATGGCCTCGATGCTGGCATTTATAAGGTACGTTGGATGATGTATAGGTGCTTTGAGACTTTCGATTCTCGATGTTTTTTTGCTTACATTTTCATCTTATTGACATTTCGTGTTTGCTTGAAGGCTATATTGGTGGGTAAGGTGGGGCAAAGTCCATTGCAGAAGCAGCTGAAGAGTGGAAGAACAGTGACGCTGTTATCAGTTGGGACAGGGGGTATTCGTAATAATCGGAGACCCTTGGCTAACGAGGAACCCAGAGAGTATGCAAATCGGTGCGCAGTTCAATGGCATCGGGTTTCGATTTATCCTACGAGACTGGGCAATATCGTCATGAAGCATGTTGTGCCCGGGTAAGCATTTCAGTCTTGATCATTTACCTGAGGTACATGGAGATAATATCATAGAAATTTATTTATATTCTGCCATCAATTCTTAACAACGAGCTTATGTTTGATTAGTATAGTGATGGGAAGCTGTACTCGATTAATTTGAATTCCAAACTGTGCCCGTTATTAACTTTGTAGTTATCGTTTTTTTCTGGTTCATGTTACTCCGTTTCTCACAAAAGATATTGTTGTAGTCTTAGTTTCGCTGTTCTTTGTTGCAGCTTTATTCTTACAGTGTAAATTTGTCCTTGTCAGTTCAATTTTGTATTTGGAAGGGAACTTGGAGACCAAAATCTTCACTGATCAAGTCACTGGTCTTGTTCGACGTATTAGAGAAGTTGCGATTCGTGGCAATGGTACATCACTTACCCCTTCATTCTTTAAAGCGGTCTTTTGTGGTTTTTTTAATCATATGTTCTTTCAAACGGTTTCTTTTACAAAAGAAAATGGTACAACCCTTGTTATGTTTTAGTACCCTGCTTCTATGAATATAGAGTTCCTCATGTATTATGGCTACTTAATTAAACTACATACCATTTGTGTCATCTTTAATAAAAAAGAATTCGGCAAGTTTTGTTCTGAACTGTGACGAAGGTACAGCCTCTTTACGATGTGAATGTCCTTTCTTGGACGTGATATGTATTTTAACTAAAAAAAGAAAAGCAAATTTATTTTCTTCTGTAGGCTGAAAAACCTATATAGATTCTGACCGACTGGTATTTGAATTATAATGTTGGGTCTATGGTTTTTCCATTTGTTTTTTCATGGCCTGATTCTTTGTGAATCGGAGGAATTATAAAGAATTTGATTGCTTTTGTGCTGACTTGACATTCATGCATGCTGAAACAAATGGCCCTAGGATCACCACATATGACCTCCGTTGATAAAGTTTGGTTGTTATGTAGGACGGCTTGTATTTTTGGGGAAGGGAGAAGGTAATGCTCAGGAGTCCACCCCATCAGAATTCAGAGGTGTTGGCTATTACTAAGAGACGTTTGCAGTTTTGTCATCTGAAGGTTTGAATCACCCACTTCTCTCTGTAAATGCTGTTATTTCACTTCACAGACTTGCAATAAGACATTCAGAAAAGGATCTACTGCATGGCCTAGTGATGATTCCCTTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCACCCTCTGTCGAGCGACAAATGTCTTTGATATTTATACGATTTAAATGAATTTGATTGAGAGAGAATTGAAATCCACTTCTTCATTGTTTTTCAACCGTGTACACGACTTGTTGTTTCTTTTGAGATGTTTATTTTGTGCTTGCATGTTCAGTTGCAGGGGTCATGGGCATAGTTATGGTTAGACAGAGTGAATGCTGTCTTTTTGTGAAACAAGCATCAGTACTTTCAATGCGCAAGACAATCTTTGATGGGTTATTAGAGGCACATGTGTGAGCAATGGAGCCACATAATGTATGAGTATGAGTTGGTAGATTGAAAATTGAAATTCAAATGCCTGAATCTGATAACTGATAACTTAAAATAAAAAATGCCATAACTGGGAATGATTGAGTTTCGTACATTGTGATGCTATGTATTTTCAATAATAGACAATGAATGAAATTGGCATTTTCTAGAAAATAGATACTAAAAATATGACAGAAGATTGTGTTTGGTTCGTAATGGTGCAGAAAGGGATAATAAGGTGACGGATAATCTACAAAAAGCAACGTGAAGGTGACTGAGATGATTGCTGGAGGGAAACTTGCTTCTCATCAAACTGCTTTTGGTGTAGAAAAATTGTTCCGAACGTTAGAAGAAAAGTTAATGTATTTGAATGTCTTTTTCTATAATTTAACCTAAATTAAACAATTGAAAGGTGTCACTTAACATTTCTCGTGATCAAATTGGTGATGTGTTAAAATTATTGCTCC

mRNA sequence

ATGACCTCCATGGTTGCACTGTCAAGAAGGCTTTGCCGCTCTCTCCTATCGAATTCAAAAGCTTCTCATCATTACGATATCCTCCCAGTAACCTATTGCACTAATAACCTTTCCTTCCGCTCGGTATCAGACATCACTGAGTCCGGTATTGAATCGGACTTGTACACGGAATTGGACTCAAATTCAGTAACTAATCAACCTTCTCTCTCACCGTCCTCGTCCCAATCACCCACCCAACCGAGACCGGTCTATAATCGACCTCTGGAAAATGGCCTCGATGCTGGCATTTATAAGGCTATATTGGTGGGTAAGGTGGGGCAAAGTCCATTGCAGAAGCAGCTGAAGAGTGGAAGAACAGTGACGCTGTTATCAGTTGGGACAGGGGGTATTCGTAATAATCGGAGACCCTTGGCTAACGAGGAACCCAGAGAGTATGCAAATCGGTGCGCAGTTCAATGGCATCGGGTTTCGATTTATCCTACGAGACTGGGCAATATCGTCATGAAGCATGTTGTGCCCGGTTCAATTTTGTATTTGGAAGGGAACTTGGAGACCAAAATCTTCACTGATCAAGTCACTGGTCTTGTTCGACGTATTAGAGAAGTTGCGATTCGTGGCAATGGACGGCTTGTATTTTTGGGGAAGGGAGAAGGTAATGCTCAGGAGTCCACCCCATCAGAATTCAGAGGTGTTGGCTATTACTAA

Coding sequence (CDS)

ATGACCTCCATGGTTGCACTGTCAAGAAGGCTTTGCCGCTCTCTCCTATCGAATTCAAAAGCTTCTCATCATTACGATATCCTCCCAGTAACCTATTGCACTAATAACCTTTCCTTCCGCTCGGTATCAGACATCACTGAGTCCGGTATTGAATCGGACTTGTACACGGAATTGGACTCAAATTCAGTAACTAATCAACCTTCTCTCTCACCGTCCTCGTCCCAATCACCCACCCAACCGAGACCGGTCTATAATCGACCTCTGGAAAATGGCCTCGATGCTGGCATTTATAAGGCTATATTGGTGGGTAAGGTGGGGCAAAGTCCATTGCAGAAGCAGCTGAAGAGTGGAAGAACAGTGACGCTGTTATCAGTTGGGACAGGGGGTATTCGTAATAATCGGAGACCCTTGGCTAACGAGGAACCCAGAGAGTATGCAAATCGGTGCGCAGTTCAATGGCATCGGGTTTCGATTTATCCTACGAGACTGGGCAATATCGTCATGAAGCATGTTGTGCCCGGTTCAATTTTGTATTTGGAAGGGAACTTGGAGACCAAAATCTTCACTGATCAAGTCACTGGTCTTGTTCGACGTATTAGAGAAGTTGCGATTCGTGGCAATGGACGGCTTGTATTTTTGGGGAAGGGAGAAGGTAATGCTCAGGAGTCCACCCCATCAGAATTCAGAGGTGTTGGCTATTACTAA

Protein sequence

MTSMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDSNSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLEGNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY*
Homology
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BLAST of Csa1G042140 vs. Swiss-Prot
Match: SSBP_ARATH (Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana GN=At4g11060 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-21
Identity = 56/171 (32.75%), Postives = 96/171 (56.14%), Query Frame = 1 

Query: 47  ESGIESDLYTELDSNSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVG 106
           + G+E D        +VT +P L P        PR  +          G+++AI+ GKVG
Sbjct: 38  DEGVEEDF-----EENVTERPELQPHG----VDPRKGWGF-------RGVHRAIICGKVG 97

Query: 107 QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNI 166
           Q+PLQK L++GRTVT+ +VGTGG+ + R   A  +P+        QWHR++++   LG+ 
Sbjct: 98  QAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQPK------PAQWHRIAVHNEVLGSY 157

Query: 167 VMKHVVPGSILYLEGNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGE 218
            ++ +   S +Y+EG++ET+++ D ++  V+ I E+ +R +G++  +  GE
Sbjct: 158 AVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGE 186

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BLAST of Csa1G042140 vs. Swiss-Prot
Match: SSB_AGRFC (Single-stranded DNA-binding protein OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=ssb PE=3 SV=2)

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-09
Identity = 45/141 (31.91%), Postives = 67/141 (47.52%), Query Frame = 1 

Query: 96  IYKAILVGKVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHR 155
           + K IL+G VG  P  ++ + GR +  L + T     +R     +E  E        WH 
Sbjct: 5   VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERKEKTE--------WHT 64

Query: 156 VSIYPTRLGNIVMKHVVPGSILYLEGNLETKIFTDQVTGLVRRIREVAIRG-NGRLVFL- 215
           V ++   L  +V ++V  G+ LY+EG L+T+ + DQ TG  R   E+ ++G N  L  L 
Sbjct: 65  VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEIVLQGFNSTLTMLD 124

Query: 216 GKGEGNAQESTPSEFRGVGYY 235
           G+GEG    S   +F G   Y
Sbjct: 125 GRGEGGGGRSGGGDFGGGNDY 136

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BLAST of Csa1G042140 vs. Swiss-Prot
Match: SSB_WIGBR (Single-stranded DNA-binding protein OS=Wigglesworthia glossinidia brevipalpis GN=ssb PE=3 SV=2)

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-09
Identity = 41/120 (34.17%), Postives = 63/120 (52.50%), Query Frame = 1 

Query: 95  GIYKAILVGKVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWH 154
           GI K IL+G +GQ P  + + +G  +T LS+ T     N R     E +E       +WH
Sbjct: 5   GINKVILIGNLGQDPEVRYIPNGNAITNLSLATS---ENWRDKNTGESKE-----KTEWH 64

Query: 155 RVSIYPTRLGNIVMKHVVPGSILYLEGNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLG 214
           RV ++  +L  +  +++  GS +Y+EGNL+T+ + DQ  G  R I E+ +  NG +  LG
Sbjct: 65  RVILF-GKLAEVAGEYLKKGSQVYIEGNLQTRKWQDQ-NGQDRYITEIVVGINGCMQMLG 114

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BLAST of Csa1G042140 vs. Swiss-Prot
Match: SSB_VIBVU (Single-stranded DNA-binding protein OS=Vibrio vulnificus (strain CMCP6) GN=ssb PE=3 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 3.4e-09
Identity = 48/141 (34.04%), Postives = 71/141 (50.35%), Query Frame = 1 

Query: 95  GIYKAILVGKVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWH 154
           GI K ILVG +G  P  + + SG  V  ++V T       R  A  EPRE       +WH
Sbjct: 5   GINKVILVGNLGNDPEIRYMPSGGAVANITVATS---ETWRDKATGEPRE-----KTEWH 64

Query: 155 RVSIYPTRLGNIVMKHVVPGSILYLEGNLETKIFTDQVTGLVRRIREVAIRG-NGRLVFL 214
           RV++Y  +L  +  +++  GS +Y+EG L+T+ + DQ  G  R   EV ++G NG +  L
Sbjct: 65  RVTLY-GKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQ-NGQDRYSTEVVVQGYNGIMQML 124

Query: 215 G----KGEGNAQESTPSEFRG 231
           G    +G   A    P + +G
Sbjct: 125 GGRQQQGGAPAMGGAPQQQQG 135

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BLAST of Csa1G042140 vs. Swiss-Prot
Match: SSB_RHIME (Single-stranded DNA-binding protein OS=Rhizobium meliloti (strain 1021) GN=ssb PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 45/141 (31.91%), Postives = 65/141 (46.10%), Query Frame = 1 

Query: 96  IYKAILVGKVGQSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHR 155
           + K IL+G VG  P  ++ + GR +  L + T     +R      E  E        WH 
Sbjct: 5   VNKVILIGNVGADPEIRRTQDGRPIANLRIATSETWRDRNSGERREKTE--------WHT 64

Query: 156 VSIYPTRLGNIVMKHVVPGSILYLEGNLETKIFTDQVTGLVRRIREVAIRG-NGRLVFLG 215
           V ++   L  +V ++V  G+ LY+EG L+T+ + DQ TG  R   EV ++G N  L  L 
Sbjct: 65  VVVFNEGLCKVVEQYVKKGAKLYIEGQLQTRKWQDQ-TGNDRYSTEVVLQGFNSTLTMLD 124

Query: 216 --KGEGNAQESTPSEFRGVGY 234
              GEG       S++ G GY
Sbjct: 125 GRGGEGGGAGRGGSDYGGGGY 136

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BLAST of Csa1G042140 vs. TrEMBL
Match: A0A0A0LTL6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042140 PE=4 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.2e-128
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1 

Query: 1   MTSMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDS 60
           MTSMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDS
Sbjct: 1   MTSMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDS 60

Query: 61  NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 120
           NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV
Sbjct: 61  NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 120

Query: 121 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 180
           TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE
Sbjct: 121 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 180

Query: 181 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY
Sbjct: 181 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 234

[Close]
BLAST of Csa1G042140 vs. TrEMBL
Match: B9RE51_RICCO (Single-stranded DNA-binding protein, mitochondrial, putative OS=Ricinus communis GN=RCOM_1618400 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 6.9e-73
Identity = 146/236 (61.86%), Postives = 181/236 (76.69%), Query Frame = 1 

Query: 4   MVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDSNSV 63
           M  +SRRLCRSLLS+SK S         +CT NLS R     ++    +      D++S+
Sbjct: 1   MANISRRLCRSLLSSSKISK----FSKPFCTGNLSSREEEHDSDESTHNS-----DTDSI 60

Query: 64  TNQPSLSPSSSQSPTQP-----RPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGR 123
           + Q   SPSS+ SP  P     R VY RPLENGLD G+YKAILVG+VGQSPLQK+L+SG+
Sbjct: 61  STQ---SPSSTSSPPPPESSPQREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGK 120

Query: 124 TVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILY 183
           +VT+ S+GTGGIRNNRRP+ NEEPREYANRCAVQWHRVS+YP RLG+IVMKH++PGSI+Y
Sbjct: 121 SVTMFSLGTGGIRNNRRPMQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMY 180

Query: 184 LEGNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           LEGNLETK+FTD +TGLVRRIREVAIR +GR+VFL KG G+ +E++  E +G+GYY
Sbjct: 181 LEGNLETKVFTDPITGLVRRIREVAIRQDGRIVFLAKG-GDEKEASSKELKGLGYY 223

[Close]
BLAST of Csa1G042140 vs. TrEMBL
Match: V4VMU2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022157mg PE=4 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 1.2e-69
Identity = 146/234 (62.39%), Postives = 171/234 (73.08%), Query Frame = 1 

Query: 4   MVALSRRLCRSLLSNSKASHHYDILPVTYCTNNL---SFRSVSDITESGIESDLYTELDS 63
           M AL+RR  RSLL N K S      P  + T+N+   S R  SD+ ES I SD       
Sbjct: 2   MAALTRRFYRSLLLNPKFSES----PKPFFTSNIFSSSSRVDSDLDESAIHSDA------ 61

Query: 64  NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 123
                 P    SS+Q+  Q R  ++RPLENGLD GI+KAILVG+VGQSP+QK+LKSGRTV
Sbjct: 62  -----DPLPDSSSTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTV 121

Query: 124 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 183
           TL S+GTGGIRNNRRPL NE P EYANRCAVQWHRVS+YP RLG +VMKH+VPGS +Y+E
Sbjct: 122 TLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVE 181

Query: 184 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           GNLE K+F D +TGLVRRIRE+AIR NGRLVFLGKG G+AQ  +PSE RG GY+
Sbjct: 182 GNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKG-GDAQPPSPSEVRGAGYF 219

[Close]
BLAST of Csa1G042140 vs. TrEMBL
Match: A0A067FQ03_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027819mg PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.6e-69
Identity = 145/234 (61.97%), Postives = 170/234 (72.65%), Query Frame = 1 

Query: 4   MVALSRRLCRSLLSNSKASHHYDILPVTYCTNNL---SFRSVSDITESGIESDLYTELDS 63
           M AL+RR  RSLL N K S      P  + T+N+   S R  SD+ ES I SD       
Sbjct: 1   MAALTRRFYRSLLLNPKFSQS----PKPFFTSNIFSSSSRVDSDLDESAIHSDA------ 60

Query: 64  NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 123
                 P    S +Q+  Q R  ++RPLENGLD GI+KAILVG+VGQSP+QK+LKSGRTV
Sbjct: 61  -----DPLPDSSPTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTV 120

Query: 124 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 183
           TL S+GTGGIRNNRRPL NE P EYANRCAVQWHRVS+YP RLG +VMKH+VPGS +Y+E
Sbjct: 121 TLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVE 180

Query: 184 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           GNLE K+F D +TGLVRRIRE+AIR NGRLVFLGKG G+AQ  +PSE RG GY+
Sbjct: 181 GNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKG-GDAQPPSPSEVRGAGYF 218

[Close]
BLAST of Csa1G042140 vs. TrEMBL
Match: D7L8J7_ARALL (Single-strand-binding family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479363 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 4.6e-69
Identity = 143/232 (61.64%), Postives = 173/232 (74.57%), Query Frame = 1 

Query: 3   SMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDSNS 62
           S+  LSRRL RSLLSN + S       +++CTNN+S R  SD  E    SD  + ++   
Sbjct: 4   SVATLSRRLYRSLLSNPRISQS----SMSFCTNNISSREDSDFDELSANSDTESPIE--- 63

Query: 63  VTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTVTL 122
               P  S   S+   + R +  RPLENGLD+GI+KAILVG+VGQ PLQK+LKSGRTVTL
Sbjct: 64  ----PKASDPVSRFSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTL 123

Query: 123 LSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLEGN 182
            SVGTGGIRNNRRPL NE+PREYA+R AVQWHRVS+YP RL  +V+K+V PG+++YLEGN
Sbjct: 124 FSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLAELVLKNVEPGTVIYLEGN 183

Query: 183 LETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           LETKIFTD VTGLVRRIREVAIR NGR+VFLGK  G+ Q+ + +E RGVGYY
Sbjct: 184 LETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKA-GDMQQPSSAELRGVGYY 223

[Close]
BLAST of Csa1G042140 vs. TAIR10
Match: AT3G18580.1 (AT3G18580.1 Nucleic acid-binding, OB-fold-like protein)

HSP 1 Score: 263.1 bits (671), Expect = 1.7e-70
Identity = 142/232 (61.21%), Postives = 171/232 (73.71%), Query Frame = 1 

Query: 3   SMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDSNS 62
           SM  LSRRL RSLLSN + S       +++CTNN++    SD  E  +ES +        
Sbjct: 4   SMATLSRRLYRSLLSNPRISQ----ASMSFCTNNITSPEDSDFDE--LESPI-------- 63

Query: 63  VTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTVTL 122
              +P  S   S+   + R +  RPLENGLD+GI+KAILVG+VGQ PLQK+LKSGRTVTL
Sbjct: 64  ---EPKASDPVSRFSGEERVMEERPLENGLDSGIFKAILVGQVGQLPLQKKLKSGRTVTL 123

Query: 123 LSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLEGN 182
            SVGTGGIRNNRRPL NE+PREYA+R AVQWHRVS+YP RL ++V+K+V PG+++YLEGN
Sbjct: 124 FSVGTGGIRNNRRPLINEDPREYASRSAVQWHRVSVYPERLADLVLKNVEPGTVIYLEGN 183

Query: 183 LETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           LETKIFTD VTGLVRRIREVAIR NGR+VFLGK  G+ Q+ + +E RGVGYY
Sbjct: 184 LETKIFTDPVTGLVRRIREVAIRRNGRVVFLGKA-GDMQQPSSAELRGVGYY 217

[Close]
BLAST of Csa1G042140 vs. TAIR10
Match: AT4G11060.1 (AT4G11060.1 mitochondrially targeted single-stranded DNA binding protein)

HSP 1 Score: 104.8 bits (260), Expect = 7.6e-23
Identity = 56/171 (32.75%), Postives = 96/171 (56.14%), Query Frame = 1 

Query: 47  ESGIESDLYTELDSNSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVG 106
           + G+E D        +VT +P L P        PR  +          G+++AI+ GKVG
Sbjct: 38  DEGVEEDF-----EENVTERPELQPHG----VDPRKGWGF-------RGVHRAIICGKVG 97

Query: 107 QSPLQKQLKSGRTVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNI 166
           Q+PLQK L++GRTVT+ +VGTGG+ + R   A  +P+        QWHR++++   LG+ 
Sbjct: 98  QAPLQKILRNGRTVTIFTVGTGGMFDQRLVGATNQPK------PAQWHRIAVHNEVLGSY 157

Query: 167 VMKHVVPGSILYLEGNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGE 218
            ++ +   S +Y+EG++ET+++ D ++  V+ I E+ +R +G++  +  GE
Sbjct: 158 AVQKLAKNSSVYVEGDIETRVYNDSISSEVKSIPEICVRRDGKIRMIKYGE 186

[Close]
BLAST of Csa1G042140 vs. NCBI nr
Match: gi|778657195|ref|XP_011650431.1| (PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis sativus])

HSP 1 Score: 467.2 bits (1201), Expect = 1.7e-128
Identity = 234/234 (100.00%), Postives = 234/234 (100.00%), Query Frame = 1 

Query: 1   MTSMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDS 60
           MTSMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDS
Sbjct: 1   MTSMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDS 60

Query: 61  NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 120
           NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV
Sbjct: 61  NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 120

Query: 121 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 180
           TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE
Sbjct: 121 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 180

Query: 181 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY
Sbjct: 181 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 234

[Close]
BLAST of Csa1G042140 vs. NCBI nr
Match: gi|659066679|ref|XP_008455960.1| (PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis melo])

HSP 1 Score: 437.2 bits (1123), Expect = 1.8e-119
Identity = 220/234 (94.02%), Postives = 225/234 (96.15%), Query Frame = 1 

Query: 1   MTSMVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDS 60
           MTS VALSRRLCRSLLSNSKASHH+DILPVTYCTNNLSFRSVSDITESGIESDLY+ELDS
Sbjct: 1   MTSTVALSRRLCRSLLSNSKASHHHDILPVTYCTNNLSFRSVSDITESGIESDLYSELDS 60

Query: 61  NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 120
           NSVTNQPS SPSSSQSPTQ R VY+RPLENGLDAGI+KAILVGKVGQSPLQKQLKSGRTV
Sbjct: 61  NSVTNQPSFSPSSSQSPTQSRKVYDRPLENGLDAGIFKAILVGKVGQSPLQKQLKSGRTV 120

Query: 121 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 180
           TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYP RLGNIVMKH VPGSI+YLE
Sbjct: 121 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPQRLGNIVMKHAVPGSIMYLE 180

Query: 181 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGK EGNAQEST SE RGVGYY
Sbjct: 181 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKEEGNAQESTSSELRGVGYY 234

[Close]
BLAST of Csa1G042140 vs. NCBI nr
Match: gi|255541852|ref|XP_002511990.1| (PREDICTED: single-stranded DNA-binding protein, mitochondrial [Ricinus communis])

HSP 1 Score: 282.0 bits (720), Expect = 9.8e-73
Identity = 146/236 (61.86%), Postives = 181/236 (76.69%), Query Frame = 1 

Query: 4   MVALSRRLCRSLLSNSKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTELDSNSV 63
           M  +SRRLCRSLLS+SK S         +CT NLS R     ++    +      D++S+
Sbjct: 1   MANISRRLCRSLLSSSKISK----FSKPFCTGNLSSREEEHDSDESTHNS-----DTDSI 60

Query: 64  TNQPSLSPSSSQSPTQP-----RPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGR 123
           + Q   SPSS+ SP  P     R VY RPLENGLD G+YKAILVG+VGQSPLQK+L+SG+
Sbjct: 61  STQ---SPSSTSSPPPPESSPQREVYQRPLENGLDLGVYKAILVGQVGQSPLQKKLRSGK 120

Query: 124 TVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILY 183
           +VT+ S+GTGGIRNNRRP+ NEEPREYANRCAVQWHRVS+YP RLG+IVMKH++PGSI+Y
Sbjct: 121 SVTMFSLGTGGIRNNRRPMQNEEPREYANRCAVQWHRVSVYPERLGSIVMKHLLPGSIMY 180

Query: 184 LEGNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           LEGNLETK+FTD +TGLVRRIREVAIR +GR+VFL KG G+ +E++  E +G+GYY
Sbjct: 181 LEGNLETKVFTDPITGLVRRIREVAIRQDGRIVFLAKG-GDEKEASSKELKGLGYY 223

[Close]
BLAST of Csa1G042140 vs. NCBI nr
Match: gi|743929454|ref|XP_011008962.1| (PREDICTED: single-stranded DNA-binding protein, mitochondrial [Populus euphratica])

HSP 1 Score: 272.3 bits (695), Expect = 7.8e-70
Identity = 141/236 (59.75%), Postives = 179/236 (75.85%), Query Frame = 1 

Query: 3   SMVALSRRLCRSLLSN----SKASHHYDILPVTYCTNNLSFRSVSDITESGIESDLYTEL 62
           SM  LSRRL  SLLS+    S+ S  +     T  TNNLSFR      ES ++      +
Sbjct: 4   SMAVLSRRLYLSLLSSNPKISQLSMPFCTSSTTTTTNNLSFRE----EESELDGSDTHSV 63

Query: 63  DSNSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGR 122
            +++ ++ PS S ++S+  +  R V +RPLENGLD G+YKAILVG+VGQ PLQK+L+SGR
Sbjct: 64  PNSTTSSSPSSSTTTSEGSSGSRMVQDRPLENGLDVGVYKAILVGQVGQHPLQKKLRSGR 123

Query: 123 TVTLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILY 182
            +T+ S+GTGGIRNNRRPL NE+PREYANRCAVQWHRVS+YP RLG +VM++VVPGSILY
Sbjct: 124 EITIFSMGTGGIRNNRRPLQNEDPREYANRCAVQWHRVSVYPERLGRVVMQNVVPGSILY 183

Query: 183 LEGNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           +EGNLETK+FTD +TGLVRRIRE+A+R NGRLVFL KG  N Q+++ SE +G+GYY
Sbjct: 184 VEGNLETKVFTDPITGLVRRIREIAVRQNGRLVFLAKG-ANDQQASSSELKGLGYY 234

[Close]
BLAST of Csa1G042140 vs. NCBI nr
Match: gi|567896822|ref|XP_006440899.1| (hypothetical protein CICLE_v10022157mg [Citrus clementina])

HSP 1 Score: 271.2 bits (692), Expect = 1.7e-69
Identity = 146/234 (62.39%), Postives = 171/234 (73.08%), Query Frame = 1 

Query: 4   MVALSRRLCRSLLSNSKASHHYDILPVTYCTNNL---SFRSVSDITESGIESDLYTELDS 63
           M AL+RR  RSLL N K S      P  + T+N+   S R  SD+ ES I SD       
Sbjct: 2   MAALTRRFYRSLLLNPKFSES----PKPFFTSNIFSSSSRVDSDLDESAIHSDA------ 61

Query: 64  NSVTNQPSLSPSSSQSPTQPRPVYNRPLENGLDAGIYKAILVGKVGQSPLQKQLKSGRTV 123
                 P    SS+Q+  Q R  ++RPLENGLD GI+KAILVG+VGQSP+QK+LKSGRTV
Sbjct: 62  -----DPLPDSSSTQNSGQQRESFDRPLENGLDPGIFKAILVGQVGQSPVQKKLKSGRTV 121

Query: 124 TLLSVGTGGIRNNRRPLANEEPREYANRCAVQWHRVSIYPTRLGNIVMKHVVPGSILYLE 183
           TL S+GTGGIRNNRRPL NE P EYANRCAVQWHRVS+YP RLG +VMKH+VPGS +Y+E
Sbjct: 122 TLFSLGTGGIRNNRRPLENENPTEYANRCAVQWHRVSVYPERLGGVVMKHLVPGSTIYVE 181

Query: 184 GNLETKIFTDQVTGLVRRIREVAIRGNGRLVFLGKGEGNAQESTPSEFRGVGYY 235
           GNLE K+F D +TGLVRRIRE+AIR NGRLVFLGKG G+AQ  +PSE RG GY+
Sbjct: 182 GNLEQKVFNDPITGLVRRIREIAIRRNGRLVFLGKG-GDAQPPSPSEVRGAGYF 219

The following BLAST results are available for this feature:
BLAST of Csa1G042140 vs. Swiss-Prot
Match NameE-valueIdentityDescription
SSBP_ARATH1.3e-2132.75Single-stranded DNA-binding protein, mitochondrial OS=Arabidopsis thaliana GN=At... [more]
SSB_AGRFC1.5e-0931.91Single-stranded DNA-binding protein OS=Agrobacterium fabrum (strain C58 / ATCC 3... [more]
SSB_WIGBR3.4e-0934.17Single-stranded DNA-binding protein OS=Wigglesworthia glossinidia brevipalpis GN... [more]
SSB_VIBVU3.4e-0934.04Single-stranded DNA-binding protein OS=Vibrio vulnificus (strain CMCP6) GN=ssb P... [more]
SSB_RHIME1.3e-0831.91Single-stranded DNA-binding protein OS=Rhizobium meliloti (strain 1021) GN=ssb P... [more]
BLAST of Csa1G042140 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LTL6_CUCSA1.2e-128100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G042140 PE=4 SV=1[more]
B9RE51_RICCO6.9e-7361.86Single-stranded DNA-binding protein, mitochondrial, putative OS=Ricinus communis... [more]
V4VMU2_9ROSI1.2e-6962.39Uncharacterized protein OS=Citrus clementina GN=CICLE_v10022157mg PE=4 SV=1[more]
A0A067FQ03_CITSI4.6e-6961.97Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g027819mg PE=4 SV=1[more]
D7L8J7_ARALL4.6e-6961.64Single-strand-binding family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARAL... [more]
BLAST of Csa1G042140 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G18580.11.7e-7061.21 Nucleic acid-binding, OB-fold-like protein[more]
AT4G11060.17.6e-2332.75 mitochondrially targeted single-stranded DNA binding protein[more]
BLAST of Csa1G042140 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778657195|ref|XP_011650431.1|1.7e-128100.00PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis sativus][more]
gi|659066679|ref|XP_008455960.1|1.8e-11994.02PREDICTED: single-stranded DNA-binding protein, mitochondrial [Cucumis melo][more]
gi|255541852|ref|XP_002511990.1|9.8e-7361.86PREDICTED: single-stranded DNA-binding protein, mitochondrial [Ricinus communis][more]
gi|743929454|ref|XP_011008962.1|7.8e-7059.75PREDICTED: single-stranded DNA-binding protein, mitochondrial [Populus euphratic... [more]
gi|567896822|ref|XP_006440899.1|1.7e-6962.39hypothetical protein CICLE_v10022157mg [Citrus clementina][more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000424Primosome_PriB/ssb
IPR011344ssDNA-bd
IPR012340NA-bd_OB-fold
IPR000424Primosome_PriB/ssb
IPR011344ssDNA-bd
IPR012340NA-bd_OB-fold
IPR000424Primosome_PriB/ssb
IPR011344ssDNA-bd
IPR012340NA-bd_OB-fold
IPR000424Primosome_PriB/ssb
IPR011344ssDNA-bd
IPR012340NA-bd_OB-fold
Vocabulary: Molecular Function
TermDefinition
GO:0003697single-stranded DNA binding
GO:0003697single-stranded DNA binding
GO:0003697single-stranded DNA binding
GO:0003697single-stranded DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006260DNA replication
GO:0006260DNA replication
GO:0006260DNA replication
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006260 DNA replication
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003697 single-stranded DNA binding
Unigene
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU085485cucumber EST collection version 3.0transcribed_cluster
CU111180cucumber EST collection version 3.0transcribed_cluster
CU130569cucumber EST collection version 3.0transcribed_cluster
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G042140.4Csa1G042140.4mRNA
Csa1G042140.3Csa1G042140.3mRNA
Csa1G042140.2Csa1G042140.2mRNA
Csa1G042140.1Csa1G042140.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU111180CU111180transcribed_cluster
CU130569CU130569transcribed_cluster
CU085485CU085485transcribed_cluster


InterPro
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000424Primosome PriB/single-strand DNA-bindingPFAMPF00436SSBcoord: 98..205
score: 6.0
IPR000424Primosome PriB/single-strand DNA-bindingPROFILEPS50935SSBcoord: 96..211
score: 12
IPR011344Single-stranded DNA-binding proteinPANTHERPTHR10302SINGLE-STRANDED DNA-BINDING PROTEINcoord: 3..216
score: 4.0
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 94..216
score: 6.5
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 95..207
score: 1.37
NoneNo IPR availablePANTHERPTHR10302:SF3SINGLE-STRANDED DNA-BINDING PROTEINcoord: 3..216
score: 4.0

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G042140Cla018520Watermelon (97103) v1cuwmB062
Csa1G042140MELO3C002071Melon (DHL92) v3.5.1cumeB027
Csa1G042140ClCG04G011320Watermelon (Charleston Gray)cuwcgB057
Csa1G042140Lsi02G001600Bottle gourd (USVL1VR-Ls)culsiB022
Csa1G042140MELO3C002071.2Melon (DHL92) v3.6.1cumedB022
Csa1G042140Cla97C04G078180Watermelon (97103) v2cuwmbB054
Csa1G042140CSPI01G06600Wild cucumber (PI 183967)cpicuB000
Csa1G042140Cucsa.113620Cucumber (Gy14) v1cgycuB137
Csa1G042140CmaCh13G010440Cucurbita maxima (Rimu)cmacuB217
Csa1G042140CmoCh13G010850Cucurbita moschata (Rifu)cmocuB202
Csa1G042140Cp4.1LG20g01080Cucurbita pepo (Zucchini)cpecuB505
Csa1G042140CsGy1G006300Cucumber (Gy14) v2cgybcuB001
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G042140Wax gourdcuwgoB028
Csa1G042140Wax gourdcuwgoB072
Csa1G042140Wax gourdcuwgoB106
Csa1G042140Cucumber (Chinese Long) v2cucuB031
Csa1G042140Cucumber (Chinese Long) v2cucuB000
Csa1G042140Cucumber (Gy14) v1cgycuB406
Csa1G042140Cucurbita maxima (Rimu)cmacuB069
Csa1G042140Cucurbita maxima (Rimu)cmacuB088
Csa1G042140Cucurbita maxima (Rimu)cmacuB406
Csa1G042140Cucurbita maxima (Rimu)cmacuB390
Csa1G042140Cucurbita moschata (Rifu)cmocuB059
Csa1G042140Cucurbita moschata (Rifu)cmocuB077
Csa1G042140Cucurbita moschata (Rifu)cmocuB380
Csa1G042140Cucurbita moschata (Rifu)cmocuB395
Csa1G042140Melon (DHL92) v3.5.1cumeB011
Csa1G042140Melon (DHL92) v3.5.1cumeB056
Csa1G042140Watermelon (Charleston Gray)cuwcgB064
Csa1G042140Watermelon (Charleston Gray)cuwcgB083
Csa1G042140Watermelon (97103) v1cuwmB040
Csa1G042140Watermelon (97103) v1cuwmB096
Csa1G042140Cucurbita pepo (Zucchini)cpecuB028
Csa1G042140Cucurbita pepo (Zucchini)cpecuB029
Csa1G042140Cucurbita pepo (Zucchini)cpecuB357
Csa1G042140Cucurbita pepo (Zucchini)cpecuB655
Csa1G042140Bottle gourd (USVL1VR-Ls)culsiB072
Csa1G042140Cucumber (Gy14) v2cgybcuB004
Csa1G042140Cucumber (Gy14) v2cgybcuB199
Csa1G042140Melon (DHL92) v3.6.1cumedB006
Csa1G042140Melon (DHL92) v3.6.1cumedB048
Csa1G042140Silver-seed gourdcarcuB0415
Csa1G042140Silver-seed gourdcarcuB0492
Csa1G042140Silver-seed gourdcarcuB0541
Csa1G042140Silver-seed gourdcarcuB0542
Csa1G042140Silver-seed gourdcarcuB0623
Csa1G042140Watermelon (97103) v2cuwmbB062
Csa1G042140Watermelon (97103) v2cuwmbB080