Csa1G015770 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G015770
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	F-box protein; contains IPR001810 (F-box domain, cyclin-like), IPR017451 (F-box associated interaction domain)
Location	Chr1 : 2140110 .. 2141315 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCGATTTACCTATTTGTAGGTTAGTATGTAAAACTTGGAATCATACAGTTTTGGATTATGCTTCTGCTCCTCAATTTCAATGTCTTACTGGTGCTTTGCTTATCTGCACACATGATGAAGCTATTAGCATCGTCGATGACAGTTTTAAACTTAAATGCAATGCCAAAATGCAATGCATGAATTTTGATTCCAGAAAGCATTTGCATGCAAATTTGGATTTGGAATTGGAATTGATGAAATCTCCATCGTTATTGTTTGATGGCAATCGGAGTATCCATATAATAAATCAATGCAATGGGTTGTTGTACATTATCACCGTTGATTATGAGTGTCATGGCATGATTAATCATGAAATATTTAACCCTATGACTAATGAGTTCCTTCAAGTTCCCTGGACCGATGAATATAGATATGATGCGATTGGATTTGGTTGTAGCACTTCTACAAAACAATACAAATTGTTTAGAGTTAGAACCACTTTGCCTAATGAAGCATTTAGGAAAAGAATGGAAATTGATGTTTTGAGGTTTGGCAACGACAACAAATGGAGATCCCTACCTTTCTTTCAGCCTTCATCATCTCACAAATTTGTTTGCAGTGCGTATTTGAATGGAGTCATCTATTGGTTGGGAAAACTAAAACGTGATAGAAACAAGGTTGTCATATATGCTCTTGATGTTGAAACGGAAAAATTTGAATCGAGTACTATTTTGGAAGTTGGCCGGATTAACCAAGAGATCTTGAACATTTATAATTTTAATAAGACCATTTATGCAACCTTCATAACTTTGGTCGATGCAACTTATAAGTACCCGATTCAAATTTGGAAGATGCAAGGAAAAAATTCATGGAGTATTCAAGAAGTACTTAATAATGACACACCAAATGATCATTCCAGAGACCTTGCAATCATCAAAGAAGCCTTTGAAGATAGAGAGCACATGGTCAATTTTCGAATTTTTTGCTTCTCTAATTCTATCTTTGGGAGGATGAGGAAGAAAATCGTATCATGGTATCAAGAGGAAAGAAGTATTTGGAAAATAGAATCCTTGAATTTTGGTTCTCTATCAAACATTTTGGCAGGAGATAGTCAAGATTGA

mRNA sequence

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCGATTTACCTATTTGTAGGTTAGTATGTAAAACTTGGAATCATACAGTTTTGGATTATGCTTCTGCTCCTCAATTTCAATGTCTTACTGGTGCTTTGCTTATCTGCACACATGATGAAGCTATTAGCATCGTCGATGACAGTTTTAAACTTAAATGCAATGCCAAAATGCAATGCATGAATTTTGATTCCAGAAAGCATTTGCATGCAAATTTGGATTTGGAATTGGAATTGATGAAATCTCCATCGTTATTGTTTGATGGCAATCGGAGTATCCATATAATAAATCAATGCAATGGGTTGTTGTACATTATCACCGTTGATTATGAGTGTCATGGCATGATTAATCATGAAATATTTAACCCTATGACTAATGAGTTCCTTCAAGTTCCCTGGACCGATGAATATAGATATGATGCGATTGGATTTGGTTGTAGCACTTCTACAAAACAATACAAATTGTTTAGAGTTAGAACCACTTTGCCTAATGAAGCATTTAGGAAAAGAATGGAAATTGATGTTTTGAGGTTTGGCAACGACAACAAATGGAGATCCCTACCTTTCTTTCAGCCTTCATCATCTCACAAATTTGTTTGCAGTGCGTATTTGAATGGAGTCATCTATTGGTTGGGAAAACTAAAACGTGATAGAAACAAGGTTGTCATATATGCTCTTGATGTTGAAACGGAAAAATTTGAATCGAGTACTATTTTGGAAGTTGGCCGGATTAACCAAGAGATCTTGAACATTTATAATTTTAATAAGACCATTTATGCAACCTTCATAACTTTGGTCGATGCAACTTATAAGTACCCGATTCAAATTTGGAAGATGCAAGGAAAAAATTCATGGAGTATTCAAGAAGTACTTAATAATGACACACCAAATGATCATTCCAGAGACCTTGCAATCATCAAAGAAGCCTTTGAAGATAGAGAGCACATGGTCAATTTTCGAATTTTTTGCTTCTCTAATTCTATCTTTGGGAGGATGAGGAAGAAAATCGTATCATGGTATCAAGAGGAAAGAAGTATTTGGAAAATAGAATCCTTGAATTTTGGTTCTCTATCAAACATTTTGGCAGGAGATAGTCAAGATTGA

Coding sequence (CDS)

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCGATTTACCTATTTGTAGGTTAGTATGTAAAACTTGGAATCATACAGTTTTGGATTATGCTTCTGCTCCTCAATTTCAATGTCTTACTGGTGCTTTGCTTATCTGCACACATGATGAAGCTATTAGCATCGTCGATGACAGTTTTAAACTTAAATGCAATGCCAAAATGCAATGCATGAATTTTGATTCCAGAAAGCATTTGCATGCAAATTTGGATTTGGAATTGGAATTGATGAAATCTCCATCGTTATTGTTTGATGGCAATCGGAGTATCCATATAATAAATCAATGCAATGGGTTGTTGTACATTATCACCGTTGATTATGAGTGTCATGGCATGATTAATCATGAAATATTTAACCCTATGACTAATGAGTTCCTTCAAGTTCCCTGGACCGATGAATATAGATATGATGCGATTGGATTTGGTTGTAGCACTTCTACAAAACAATACAAATTGTTTAGAGTTAGAACCACTTTGCCTAATGAAGCATTTAGGAAAAGAATGGAAATTGATGTTTTGAGGTTTGGCAACGACAACAAATGGAGATCCCTACCTTTCTTTCAGCCTTCATCATCTCACAAATTTGTTTGCAGTGCGTATTTGAATGGAGTCATCTATTGGTTGGGAAAACTAAAACGTGATAGAAACAAGGTTGTCATATATGCTCTTGATGTTGAAACGGAAAAATTTGAATCGAGTACTATTTTGGAAGTTGGCCGGATTAACCAAGAGATCTTGAACATTTATAATTTTAATAAGACCATTTATGCAACCTTCATAACTTTGGTCGATGCAACTTATAAGTACCCGATTCAAATTTGGAAGATGCAAGGAAAAAATTCATGGAGTATTCAAGAAGTACTTAATAATGACACACCAAATGATCATTCCAGAGACCTTGCAATCATCAAAGAAGCCTTTGAAGATAGAGAGCACATGGTCAATTTTCGAATTTTTTGCTTCTCTAATTCTATCTTTGGGAGGATGAGGAAGAAAATCGTATCATGGTATCAAGAGGAAAGAAGTATTTGGAAAATAGAATCCTTGAATTTTGGTTCTCTATCAAACATTTTGGCAGGAGATAGTCAAGATTGA

Protein sequence

MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLLFDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGCSTSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNGVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSNSIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD*

Homology

[Close]

BLAST of Csa1G015770 vs. TrEMBL
Match: A0A0A0LPH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015770 PE=4 SV=1)

HSP 1 Score: 830.9 bits (2145), Expect = 6.8e-238
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 1


Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60

Query: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120
           FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL
Sbjct: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120

Query: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180
           FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC
Sbjct: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180

Query: 181 STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG 240
           STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG
Sbjct: 181 STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG 240

Query: 241 VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV 300
           VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV
Sbjct: 241 VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV 300

Query: 301 DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN 360
           DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN
Sbjct: 301 DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN 360

Query: 361 SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD 402
           SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD
Sbjct: 361 SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD 401

[Close]

BLAST of Csa1G015770 vs. TrEMBL
Match: A0A0A0LRY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 1.2e-165
Identity = 301/407 (73.96%), Postives = 336/407 (82.56%), Query Frame = 1


Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA Q
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60

Query: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120
           FQCLT ALLICT+DEAIS +DDS K+ CNA MQCM+FDSRKHLHAN DL+ ELMKSPSLL
Sbjct: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120

Query: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180
           FDGN SIHII+QCNGLLY+IT +YE HG+ NH IFNPMTNEF+Q+PW DEY YD IGFGC
Sbjct: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180

Query: 181 STSTKQYKLFRVRTTLPNEA-FRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLN 240
             STKQYKLFRVRTT P     RK ME+DVLRFGNDNKWR LPF  PS SH FVCSAYLN
Sbjct: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFL-PSPSHVFVCSAYLN 240

Query: 241 GVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITL 300
           GVIYWLGK++   N+VVI+A DVETEKFESSTIL+VG ++QE LN+Y F +TIYATFI  
Sbjct: 241 GVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFI-- 300

Query: 301 VDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH---MVNFRIF 360
            + TY   IQ+WKMQ K SW  + ++ +D PN H RDL II EA EDRE    MVNFR F
Sbjct: 301 -EMTYD-SIQVWKMQEKGSWIPEVLVMDDIPN-HWRDLTII-EALEDRETILCMVNFRFF 360

Query: 361 CFSNSIFGRMRKKIVSWYQEE---RSIWKIESLNFGSLSNILAGDSQ 401
           CF NSIFGR RKK++  Y+E+   RSIWKIESLNFGSLSNIL+G+ Q
Sbjct: 361 CFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 400

[Close]

BLAST of Csa1G015770 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.1e-62
Identity = 180/432 (41.67%), Postives = 245/432 (56.71%), Query Frame = 1


Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQF 62
           +ME M    ++M +DWG+ LP  I  TIFSKLVIS+LP CR VCKTWNH VL YAS+ Q 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLH-ANLDLELELMKSPSLL 122
           Q LT A L+ T D  +     +++L CN KM C+N D+R+  +  + DLE E +KS SL 
Sbjct: 83  QFLTNAFLLSTSDRML-----NYEL-CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 142

Query: 123 FDGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----PWTDEYR 182
           F G+ +  I+  + CNGL++I    DY  C G     IFNPMTNEF QV     + D Y 
Sbjct: 143 FYGDWTFMILLAHPCNGLMFISKCSDYTWCQG-----IFNPMTNEFFQVSEQDTFDDFYH 202

Query: 183 YDAIGFGCSTSTKQYKLFRVRTTLP-NEAFR---------KRMEIDVLRFGND------- 242
           Y   GFG S  +KQYKLFRV   +P +E FR             ++VL FG         
Sbjct: 203 Y---GFGLSAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPI 262

Query: 243 -NKWRSLPFFQPSSSHKFVCSAYLNGVIYWLGKL--KRDRNKVVIYALDVETEKFESSTI 302
            N+WR L     + S   +   YLNG+IYWLGK   K+++ + VIYALDVETE+ E S I
Sbjct: 263 HNQWRHL----HNLSCDLIHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVI 322

Query: 303 LEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPND 362
           L+V   + +   ++ FN TIYA F    +   +  IQ+W MQ K SW  Q V+      D
Sbjct: 323 LQVQASDGK---MHPFNGTIYALFYINWEKDSR-TIQVWSMQEKCSWIRQFVI-----RD 382

Query: 363 HSRDLAIIK--EAFEDRE--HMVNFRIFCFSNSIFGRMRKKIVSWYQEE-RSIWKIESLN 400
            S++   ++  + FED E   +++   FCF + +    +K+I+S  Q++ R + +IE LN
Sbjct: 383 ISKEWGCLELIKIFEDGEILFLIDSDFFCFYHPL--TEKKRIISKNQKKNRFVCQIECLN 425

[Close]

BLAST of Csa1G015770 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 5.7e-59
Identity = 190/436 (43.58%), Postives = 240/436 (55.05%), Query Frame = 1


Query: 1   MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDY 60
           ME ME+ I       ++M ++ G+ LP  I  TIFSKLVISDLP CRLV  TWN  VLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASAPQFQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLH-ANLDLELELM 120
           AS+ Q Q L  A L+ T D  +     ++KL CN KM C+N D+R+  +  + DLE E +
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGL-----NYKL-CNPKMHCINLDTRQLSNDFDFDLESEFI 120

Query: 121 KSPSLLFDGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----P 180
           KS SL FDG+ +  II    CNGL+ I    DY  C G     IFNPMTNEFLQV     
Sbjct: 121 KSASLQFDGDWTYTIIMAGSCNGLMLISKCSDYTWCQG-----IFNPMTNEFLQVSEHGT 180

Query: 181 WTDEYRYDAIGFGCSTSTKQYKLFRV-----RTTLPNEAFRKRMEIDVLRFGND------ 240
           + D Y Y   GFG S  TKQYKLFRV     R    +        ++VL FG        
Sbjct: 181 FDDFYLY---GFGFSPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSI 240

Query: 241 ---NKWR---SLPFFQPSSSHKFVCSAYLNGVIYWLGKLK-RDR-NKVVIYALDVETEKF 300
              N+WR   +LPF             YLNG+IYWL K K +D+  K VIYALDVETE  
Sbjct: 241 PIHNQWRRLHTLPF------EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHI 300

Query: 301 ESSTILEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNN 360
           E + +L+V   +     I+ FN TIYATF    +   +  IQ+W+MQ K+SW  + V+  
Sbjct: 301 EMTVVLQVP--SNGYGKIHQFNGTIYATFHINWEKDSR-TIQVWRMQEKDSWVRKFVI-- 360

Query: 361 DTPNDHSRD---LAIIKEAFEDRE--HMVNFRIFCFSNSIFGRMRKKIVSWYQ-EERSIW 398
               D SR+   L +IK  FED E   M+N   FCF N      +K+I+S  Q ++R I 
Sbjct: 361 ---CDISREWIHLQLIK-MFEDEEILFMINMDFFCFYNP--SSKKKRIISKNQKKKRYIC 405

[Close]

BLAST of Csa1G015770 vs. TrEMBL
Match: A0A0A0LSE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1)

HSP 1 Score: 213.0 bits (541), Expect = 6.7e-52
Identity = 164/408 (40.20%), Postives = 223/408 (54.66%), Query Frame = 1


Query: 15  IMDW-GRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTH 74
           I DW   LP+ IG TIFSKL++S+LP CR+VCK WN  +LD+AS+        A    T+
Sbjct: 3   ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASS--------ASKFLTN 62

Query: 75  DEAISIVDDSFKLKC-----NAKMQCMNFDSRKHLHANLDLELELMKSPSLLFDGNRSIH 134
           D  +   D      C     N  M C+ FD   +L  +LDL+LEL  + S  F+      
Sbjct: 63  DFILFTCDVLHPFPCPDNHTNPNMHCLRFD---NLDLDLDLDLELEVNKSSSFEAGVVYK 122

Query: 135 IINQCNGLL--YIITVDYECHGMINHEIFNPMTNEFLQVPWTD--EYRYDAIGFGCSTST 194
           +IN CNGLL  Y + + +    ++   IFNPMTNEF QVP  +  EY Y   GFG   +T
Sbjct: 123 LINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHY---GFGFIPAT 182

Query: 195 KQYKLFRVRTTL---PNEAFRKRMEIDVLRFG-------NDNKWRSLPFFQPSSSHKFVC 254
           KQYKLFRV   L   P E       +DVL FG         ++WR L +  P        
Sbjct: 183 KQYKLFRVNFPLNVRPEEP-NSVSHLDVLTFGRSEIIDPKQSQWRRL-YSLPGGVENH-- 242

Query: 255 SAYLNGVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYA 314
            A++NGVIYWLG+ K ++N+ V+Y LDVETEK + S +LEV  +N   ++I  FN T+YA
Sbjct: 243 GAHVNGVIYWLGEGK-EQNEYVVYTLDVETEKIQLSAVLEV--VNPMWMSIQQFNGTVYA 302

Query: 315 TFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH--MVN 374
            F  + +AT     Q+W+MQ KNSW I++ + +D       +L ++K A+E+ E   MV 
Sbjct: 303 VF-HMEEAT-----QVWRMQEKNSW-IRDFVIDDC------NLTLVK-AYENGEMLCMVK 362

Query: 375 FRIFCFSNSIFGRMRKKIVSWYQEERSIWKI--ESLNFGSLSNILAGD 399
             +F   N   G   KK++S   E++    I    LNFGSL NILAGD
Sbjct: 363 PTVFWLYNPSTG--SKKVLSLRNEKKIFLGICHLELNFGSLLNILAGD 373

[Close]

BLAST of Csa1G015770 vs. NCBI nr
Match: gi|700208689|gb|KGN63785.1| (hypothetical protein Csa_1G015770 [Cucumis sativus])

HSP 1 Score: 830.9 bits (2145), Expect = 9.7e-238
Identity = 401/401 (100.00%), Postives = 401/401 (100.00%), Query Frame = 1


Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60

Query: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120
           FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL
Sbjct: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120

Query: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180
           FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC
Sbjct: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180

Query: 181 STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG 240
           STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG
Sbjct: 181 STSTKQYKLFRVRTTLPNEAFRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLNG 240

Query: 241 VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV 300
           VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV
Sbjct: 241 VIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITLV 300

Query: 301 DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN 360
           DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN
Sbjct: 301 DATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREHMVNFRIFCFSN 360

Query: 361 SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD 402
           SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD
Sbjct: 361 SIFGRMRKKIVSWYQEERSIWKIESLNFGSLSNILAGDSQD 401

[Close]

BLAST of Csa1G015770 vs. NCBI nr
Match: gi|449441129|ref|XP_004138336.1| (PREDICTED: uncharacterized protein LOC101222225 [Cucumis sativus])

HSP 1 Score: 590.9 bits (1522), Expect = 1.7e-165
Identity = 301/407 (73.96%), Postives = 336/407 (82.56%), Query Frame = 1


Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA Q
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60

Query: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120
           FQCLT ALLICT+DEAIS +DDS K+ CNA MQCM+FDSRKHLHAN DL+ ELMKSPSLL
Sbjct: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120

Query: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180
           FDGN SIHII+QCNGLLY+IT +YE HG+ NH IFNPMTNEF+Q+PW DEY YD IGFGC
Sbjct: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180

Query: 181 STSTKQYKLFRVRTTLPNEA-FRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLN 240
             STKQYKLFRVRTT P     RK ME+DVLRFGNDNKWR LPF  PS SH FVCSAYLN
Sbjct: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFL-PSPSHVFVCSAYLN 240

Query: 241 GVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITL 300
           GVIYWLGK++   N+VVI+A DVETEKFESSTIL+VG ++QE LN+Y F +TIYATFI  
Sbjct: 241 GVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFI-- 300

Query: 301 VDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH---MVNFRIF 360
            + TY   IQ+WKMQ K SW  + ++ +D PN H RDL II EA EDRE    MVNFR F
Sbjct: 301 -EMTYD-SIQVWKMQEKGSWIPEVLVMDDIPN-HWRDLTII-EALEDRETILCMVNFRFF 360

Query: 361 CFSNSIFGRMRKKIVSWYQEE---RSIWKIESLNFGSLSNILAGDSQ 401
           CF NSIFGR RKK++  Y+E+   RSIWKIESLNFGSLSNIL+G+ Q
Sbjct: 361 CFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 400

[Close]

BLAST of Csa1G015770 vs. NCBI nr
Match: gi|700208649|gb|KGN63745.1| (hypothetical protein Csa_1G014420 [Cucumis sativus])

HSP 1 Score: 246.1 bits (627), Expect = 1.0e-61
Identity = 180/432 (41.67%), Postives = 245/432 (56.71%), Query Frame = 1


Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQF 62
           +ME M    ++M +DWG+ LP  I  TIFSKLVIS+LP CR VCKTWNH VL YAS+ Q 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLH-ANLDLELELMKSPSLL 122
           Q LT A L+ T D  +     +++L CN KM C+N D+R+  +  + DLE E +KS SL 
Sbjct: 83  QFLTNAFLLSTSDRML-----NYEL-CNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 142

Query: 123 FDGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----PWTDEYR 182
           F G+ +  I+  + CNGL++I    DY  C G     IFNPMTNEF QV     + D Y 
Sbjct: 143 FYGDWTFMILLAHPCNGLMFISKCSDYTWCQG-----IFNPMTNEFFQVSEQDTFDDFYH 202

Query: 183 YDAIGFGCSTSTKQYKLFRVRTTLP-NEAFR---------KRMEIDVLRFGND------- 242
           Y   GFG S  +KQYKLFRV   +P +E FR             ++VL FG         
Sbjct: 203 Y---GFGLSAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPI 262

Query: 243 -NKWRSLPFFQPSSSHKFVCSAYLNGVIYWLGKL--KRDRNKVVIYALDVETEKFESSTI 302
            N+WR L     + S   +   YLNG+IYWLGK   K+++ + VIYALDVETE+ E S I
Sbjct: 263 HNQWRHL----HNLSCDLIHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVI 322

Query: 303 LEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPND 362
           L+V   + +   ++ FN TIYA F    +   +  IQ+W MQ K SW  Q V+      D
Sbjct: 323 LQVQASDGK---MHPFNGTIYALFYINWEKDSR-TIQVWSMQEKCSWIRQFVI-----RD 382

Query: 363 HSRDLAIIK--EAFEDRE--HMVNFRIFCFSNSIFGRMRKKIVSWYQEE-RSIWKIESLN 400
            S++   ++  + FED E   +++   FCF + +    +K+I+S  Q++ R + +IE LN
Sbjct: 383 ISKEWGCLELIKIFEDGEILFLIDSDFFCFYHPL--TEKKRIISKNQKKNRFVCQIECLN 425

[Close]

BLAST of Csa1G015770 vs. NCBI nr
Match: gi|700210076|gb|KGN65172.1| (hypothetical protein Csa_1G257290 [Cucumis sativus])

HSP 1 Score: 236.5 bits (602), Expect = 8.1e-59
Identity = 190/436 (43.58%), Postives = 240/436 (55.05%), Query Frame = 1


Query: 1   MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDY 60
           ME ME+ I       ++M ++ G+ LP  I  TIFSKLVISDLP CRLV  TWN  VLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASAPQFQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLH-ANLDLELELM 120
           AS+ Q Q L  A L+ T D  +     ++KL CN KM C+N D+R+  +  + DLE E +
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGL-----NYKL-CNPKMHCINLDTRQLSNDFDFDLESEFI 120

Query: 121 KSPSLLFDGNRSIHII--NQCNGLLYIITV-DYE-CHGMINHEIFNPMTNEFLQV----P 180
           KS SL FDG+ +  II    CNGL+ I    DY  C G     IFNPMTNEFLQV     
Sbjct: 121 KSASLQFDGDWTYTIIMAGSCNGLMLISKCSDYTWCQG-----IFNPMTNEFLQVSEHGT 180

Query: 181 WTDEYRYDAIGFGCSTSTKQYKLFRV-----RTTLPNEAFRKRMEIDVLRFGND------ 240
           + D Y Y   GFG S  TKQYKLFRV     R    +        ++VL FG        
Sbjct: 181 FDDFYLY---GFGFSPITKQYKLFRVFDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSI 240

Query: 241 ---NKWR---SLPFFQPSSSHKFVCSAYLNGVIYWLGKLK-RDR-NKVVIYALDVETEKF 300
              N+WR   +LPF             YLNG+IYWL K K +D+  K VIYALDVETE  
Sbjct: 241 PIHNQWRRLHTLPF------EIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHI 300

Query: 301 ESSTILEVGRINQEILNIYNFNKTIYATFITLVDATYKYPIQIWKMQGKNSWSIQEVLNN 360
           E + +L+V   +     I+ FN TIYATF    +   +  IQ+W+MQ K+SW  + V+  
Sbjct: 301 EMTVVLQVP--SNGYGKIHQFNGTIYATFHINWEKDSR-TIQVWRMQEKDSWVRKFVI-- 360

Query: 361 DTPNDHSRD---LAIIKEAFEDRE--HMVNFRIFCFSNSIFGRMRKKIVSWYQ-EERSIW 398
               D SR+   L +IK  FED E   M+N   FCF N      +K+I+S  Q ++R I 
Sbjct: 361 ---CDISREWIHLQLIK-MFEDEEILFMINMDFFCFYNP--SSKKKRIISKNQKKKRYIC 405

[Close]

BLAST of Csa1G015770 vs. NCBI nr
Match: gi|778664711|ref|XP_011660339.1| (PREDICTED: putative F-box protein At1g32420 [Cucumis sativus])

HSP 1 Score: 213.0 bits (541), Expect = 9.6e-52
Identity = 164/408 (40.20%), Postives = 223/408 (54.66%), Query Frame = 1


Query: 15  IMDW-GRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQFQCLTGALLICTH 74
           I DW   LP+ IG TIFSKL++S+LP CR+VCK WN  +LD+AS+        A    T+
Sbjct: 3   ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASS--------ASKFLTN 62

Query: 75  DEAISIVDDSFKLKC-----NAKMQCMNFDSRKHLHANLDLELELMKSPSLLFDGNRSIH 134
           D  +   D      C     N  M C+ FD   +L  +LDL+LEL  + S  F+      
Sbjct: 63  DFILFTCDVLHPFPCPDNHTNPNMHCLRFD---NLDLDLDLDLELEVNKSSSFEAGVVYK 122

Query: 135 IINQCNGLL--YIITVDYECHGMINHEIFNPMTNEFLQVPWTD--EYRYDAIGFGCSTST 194
           +IN CNGLL  Y + + +    ++   IFNPMTNEF QVP  +  EY Y   GFG   +T
Sbjct: 123 LINSCNGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVPHDEIVEYHY---GFGFIPAT 182

Query: 195 KQYKLFRVRTTL---PNEAFRKRMEIDVLRFG-------NDNKWRSLPFFQPSSSHKFVC 254
           KQYKLFRV   L   P E       +DVL FG         ++WR L +  P        
Sbjct: 183 KQYKLFRVNFPLNVRPEEP-NSVSHLDVLTFGRSEIIDPKQSQWRRL-YSLPGGVENH-- 242

Query: 255 SAYLNGVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYA 314
            A++NGVIYWLG+ K ++N+ V+Y LDVETEK + S +LEV  +N   ++I  FN T+YA
Sbjct: 243 GAHVNGVIYWLGEGK-EQNEYVVYTLDVETEKIQLSAVLEV--VNPMWMSIQQFNGTVYA 302

Query: 315 TFITLVDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH--MVN 374
            F  + +AT     Q+W+MQ KNSW I++ + +D       +L ++K A+E+ E   MV 
Sbjct: 303 VF-HMEEAT-----QVWRMQEKNSW-IRDFVIDDC------NLTLVK-AYENGEMLCMVK 362

Query: 375 FRIFCFSNSIFGRMRKKIVSWYQEERSIWKI--ESLNFGSLSNILAGD 399
             +F   N   G   KK++S   E++    I    LNFGSL NILAGD
Sbjct: 363 PTVFWLYNPSTG--SKKVLSLRNEKKIFLGICHLELNFGSLLNILAGD 373

The following BLAST results are available for this feature:

BLAST of Csa1G015770 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LPH0_CUCSA	6.8e-238	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015770 PE=4 SV=1	[more]
A0A0A0LRY6_CUCSA	1.2e-165	73.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1	[more]
A0A0A0LPC6_CUCSA	7.1e-62	41.67	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1	[more]
A0A0A0LWG1_CUCSA	5.7e-59	43.58	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1	[more]
A0A0A0LSE0_CUCSA	6.7e-52	40.20	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1	[more]

BLAST of Csa1G015770 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|700208689\|gb\|KGN63785.1\|	9.7e-238	100.00	hypothetical protein Csa_1G015770 [Cucumis sativus]	[more]
gi\|449441129\|ref\|XP_004138336.1\|	1.7e-165	73.96	PREDICTED: uncharacterized protein LOC101222225 [Cucumis sativus]	[more]
gi\|700208649\|gb\|KGN63745.1\|	1.0e-61	41.67	hypothetical protein Csa_1G014420 [Cucumis sativus]	[more]
gi\|700210076\|gb\|KGN65172.1\|	8.1e-59	43.58	hypothetical protein Csa_1G257290 [Cucumis sativus]	[more]
gi\|778664711\|ref\|XP_011660339.1\|	9.6e-52	40.20	PREDICTED: putative F-box protein At1g32420 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR013187	F-box-assoc_dom_typ3
IPR017451	F-box-assoc_interact_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G015770.1	Csa1G015770.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 16..52 score: 3.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 18..54 score: 1.
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 237..350 score: 2.
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 131..327 score: 8.3
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 17..54 score: 1.
None	No IPR available	PANTHER	PTHR32133	FAMILY NOT NAMED	coord: 5..388 score: 8.9

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G015770	Watermelon (97103) v2	cuwmbB055
Csa1G015770	Watermelon (97103) v2	cuwmbB079
Csa1G015770	Wax gourd	cuwgoB114
Csa1G015770	Cucumber (Chinese Long) v2	cucuB000
Csa1G015770	Cucumber (Gy14) v1	cgycuB299
Csa1G015770	Cucumber (Gy14) v1	cgycuB405
Csa1G015770	Cucurbita maxima (Rimu)	cmacuB061
Csa1G015770	Cucurbita maxima (Rimu)	cmacuB087
Csa1G015770	Cucurbita maxima (Rimu)	cmacuB110
Csa1G015770	Cucurbita maxima (Rimu)	cmacuB221
Csa1G015770	Cucurbita maxima (Rimu)	cmacuB393
Csa1G015770	Cucurbita maxima (Rimu)	cmacuB686
Csa1G015770	Cucurbita moschata (Rifu)	cmocuB076
Csa1G015770	Cucurbita moschata (Rifu)	cmocuB050
Csa1G015770	Cucurbita moschata (Rifu)	cmocuB095
Csa1G015770	Cucurbita moschata (Rifu)	cmocuB207
Csa1G015770	Cucurbita moschata (Rifu)	cmocuB385
Csa1G015770	Melon (DHL92) v3.5.1	cumeB010
Csa1G015770	Melon (DHL92) v3.5.1	cumeB055
Csa1G015770	Watermelon (Charleston Gray)	cuwcgB058
Csa1G015770	Watermelon (Charleston Gray)	cuwcgB082
Csa1G015770	Watermelon (97103) v1	cuwmB063
Csa1G015770	Watermelon (97103) v1	cuwmB095
Csa1G015770	Cucurbita pepo (Zucchini)	cpecuB033
Csa1G015770	Cucurbita pepo (Zucchini)	cpecuB352
Csa1G015770	Cucurbita pepo (Zucchini)	cpecuB381
Csa1G015770	Cucurbita pepo (Zucchini)	cpecuB509
Csa1G015770	Cucurbita pepo (Zucchini)	cpecuB643
Csa1G015770	Bottle gourd (USVL1VR-Ls)	culsiB025
Csa1G015770	Bottle gourd (USVL1VR-Ls)	culsiB071
Csa1G015770	Cucumber (Gy14) v2	cgybcuB001
Csa1G015770	Cucumber (Gy14) v2	cgybcuB005
Csa1G015770	Melon (DHL92) v3.6.1	cumedB047
Csa1G015770	Silver-seed gourd	carcuB0416
Csa1G015770	Silver-seed gourd	carcuB0491
Csa1G015770	Silver-seed gourd	carcuB0543
Csa1G015770	Silver-seed gourd	carcuB0621
Csa1G015770	Silver-seed gourd	carcuB0622