Csa1G015760 (gene) Cucumber (Chinese Long) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Csa1G015760
Type	gene
Organism	Cucumis. sativus (Cucumber (Chinese Long) v2)
Description	F-box family protein; contains IPR001810 (F-box domain, cyclin-like), IPR017451 (F-box associated interaction domain)
Location	Chr1 : 2137356 .. 2138558 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCAATTTACCTATTTGTAGGTTAGTCTGTAGAACTTGGAATCATATAGTTTTGGATTATGCTTCTGCTACTCAATTTCAATGTCTTACTACGGCTTTGCTTATCTGCACAAATGATGAAGCTATTAGTTTCTTGGATGATAGTTCTAAAGTTAATTGCAATGCCACAATGCAATGCATGGATTTTGATTCCAGAAAGCATTTGCATGCAAACTTTGATTTGGATTCCGAACTGATGAAATCTCCATCGTTATTGTTTGATGGCAATTGGAGTATCCATATAATAAGCCAATGCAATGGATTGTTGTACGTTATCACGAATAATTATGAATATCATGGCTTGTATAATCATGGCATATTTAATCCTATGACGAATGAGTTCATTCAAATTCCTTGGCATGATGAATATGGATATGATGTGATTGGATTTGGTTGTGGCATTTCCACAAAGCAATACAAATTGTTTAGAGTTAGAACCACTTTTCCTAGAGGAGGAGAAGGGAGGAAAGGAATGGAAATGGATGTGTTGAGGTTTGGTAACGACAACAAATGGAGATACCTACCTTTTCTGCCTTCACCATCTCACGTCTTTGTTTGCAGTGCGTATTTGAATGGAGTGATCTATTGGTTGGGAAAAGTAGAAGCTAAAGAGAACGAGGTGGTCATACATGCTTTTGATGTTGAAACTGAAAAATTTGAATCAAGTACTATTTTGGATGTCGGTCTAGTTGACCAAGAGTCCTTGAACCTTTATAAATTTAAAGAAACCATTTATGCAACCTTCATCGAGATGACTTATGATTCCATTCAAGTATGGAAGATGCAAGAGAAAGGTTCATGGATTCCGGAAGTACTTGTTATGGATGACATACCAAATCATTGGAGAGACCTTACGATCATTGAAGCCTTAGAAGATAGAGAGACGATCTTGTGCATGGTCAATTTTCGATTTTTTTGCTTCTATAATTCTATCTTTGGGAGGAGGAGGAAGAAGGTCATACCAAGGTATCGAGAGAAAACAAGGTTTCGAAGTATATGGAAAATAGAATCCTTGAATTTTGGTTCTTTATCAAATATTTTGTCGGGTGAATGTCAATAA

mRNA sequence

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCAATTTACCTATTTGTAGGTTAGTCTGTAGAACTTGGAATCATATAGTTTTGGATTATGCTTCTGCTACTCAATTTCAATGTCTTACTACGGCTTTGCTTATCTGCACAAATGATGAAGCTATTAGTTTCTTGGATGATAGTTCTAAAGTTAATTGCAATGCCACAATGCAATGCATGGATTTTGATTCCAGAAAGCATTTGCATGCAAACTTTGATTTGGATTCCGAACTGATGAAATCTCCATCGTTATTGTTTGATGGCAATTGGAGTATCCATATAATAAGCCAATGCAATGGATTGTTGTACGTTATCACGAATAATTATGAATATCATGGCTTGTATAATCATGGCATATTTAATCCTATGACGAATGAGTTCATTCAAATTCCTTGGCATGATGAATATGGATATGATGTGATTGGATTTGGTTGTGGCATTTCCACAAAGCAATACAAATTGTTTAGAGTTAGAACCACTTTTCCTAGAGGAGGAGAAGGGAGGAAAGGAATGGAAATGGATGTGTTGAGGTTTGGTAACGACAACAAATGGAGATACCTACCTTTTCTGCCTTCACCATCTCACGTCTTTGTTTGCAGTGCGTATTTGAATGGAGTGATCTATTGGTTGGGAAAAGTAGAAGCTAAAGAGAACGAGGTGGTCATACATGCTTTTGATGTTGAAACTGAAAAATTTGAATCAAGTACTATTTTGGATGTCGGTCTAGTTGACCAAGAGTCCTTGAACCTTTATAAATTTAAAGAAACCATTTATGCAACCTTCATCGAGATGACTTATGATTCCATTCAAGTATGGAAGATGCAAGAGAAAGGTTCATGGATTCCGGAAGTACTTGTTATGGATGACATACCAAATCATTGGAGAGACCTTACGATCATTGAAGCCTTAGAAGATAGAGAGACGATCTTGTGCATGGTCAATTTTCGATTTTTTTGCTTCTATAATTCTATCTTTGGGAGGAGGAGGAAGAAGGTCATACCAAGGTATCGAGAGAAAACAAGGTTTCGAAGTATATGGAAAATAGAATCCTTGAATTTTGGTTCTTTATCAAATATTTTGTCGGGTGAATGTCAATAA

Coding sequence (CDS)

ATGGAGAAGATGGAGAAAATGATTTGTGAGAGTAAGAAGATGATCATGGATTGGGGAAGACTTCCAACTTGTATTGGTACAACAATCTTCTCTAAACTTGTTATCTCCAATTTACCTATTTGTAGGTTAGTCTGTAGAACTTGGAATCATATAGTTTTGGATTATGCTTCTGCTACTCAATTTCAATGTCTTACTACGGCTTTGCTTATCTGCACAAATGATGAAGCTATTAGTTTCTTGGATGATAGTTCTAAAGTTAATTGCAATGCCACAATGCAATGCATGGATTTTGATTCCAGAAAGCATTTGCATGCAAACTTTGATTTGGATTCCGAACTGATGAAATCTCCATCGTTATTGTTTGATGGCAATTGGAGTATCCATATAATAAGCCAATGCAATGGATTGTTGTACGTTATCACGAATAATTATGAATATCATGGCTTGTATAATCATGGCATATTTAATCCTATGACGAATGAGTTCATTCAAATTCCTTGGCATGATGAATATGGATATGATGTGATTGGATTTGGTTGTGGCATTTCCACAAAGCAATACAAATTGTTTAGAGTTAGAACCACTTTTCCTAGAGGAGGAGAAGGGAGGAAAGGAATGGAAATGGATGTGTTGAGGTTTGGTAACGACAACAAATGGAGATACCTACCTTTTCTGCCTTCACCATCTCACGTCTTTGTTTGCAGTGCGTATTTGAATGGAGTGATCTATTGGTTGGGAAAAGTAGAAGCTAAAGAGAACGAGGTGGTCATACATGCTTTTGATGTTGAAACTGAAAAATTTGAATCAAGTACTATTTTGGATGTCGGTCTAGTTGACCAAGAGTCCTTGAACCTTTATAAATTTAAAGAAACCATTTATGCAACCTTCATCGAGATGACTTATGATTCCATTCAAGTATGGAAGATGCAAGAGAAAGGTTCATGGATTCCGGAAGTACTTGTTATGGATGACATACCAAATCATTGGAGAGACCTTACGATCATTGAAGCCTTAGAAGATAGAGAGACGATCTTGTGCATGGTCAATTTTCGATTTTTTTGCTTCTATAATTCTATCTTTGGGAGGAGGAGGAAGAAGGTCATACCAAGGTATCGAGAGAAAACAAGGTTTCGAAGTATATGGAAAATAGAATCCTTGAATTTTGGTTCTTTATCAAATATTTTGTCGGGTGAATGTCAATAA

Protein sequence

MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQFQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLLFDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGCGISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNGVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMTYDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ*

Homology

[Close]

BLAST of Csa1G015760 vs. TrEMBL
Match: A0A0A0LRY6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1)

HSP 1 Score: 838.6 bits (2165), Expect = 3.2e-240
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1


Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60

Query: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120
           FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL
Sbjct: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120

Query: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180
           FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC
Sbjct: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180

Query: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG 240
           GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG
Sbjct: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG 240

Query: 241 VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT 300
           VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT
Sbjct: 241 VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT 300

Query: 301 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 360
           YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF
Sbjct: 301 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 360

Query: 361 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 401
           GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ
Sbjct: 361 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 400

[Close]

BLAST of Csa1G015760 vs. TrEMBL
Match: A0A0A0LPH0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015770 PE=4 SV=1)

HSP 1 Score: 590.9 bits (1522), Expect = 1.2e-165
Identity = 301/407 (73.96%), Postives = 336/407 (82.56%), Query Frame = 1


Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA Q
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60

Query: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120
           FQCLT ALLICT+DEAIS +DDS K+ CNA MQCM+FDSRKHLHAN DL+ ELMKSPSLL
Sbjct: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120

Query: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180
           FDGN SIHII+QCNGLLY+IT +YE HG+ NH IFNPMTNEF+Q+PW DEY YD IGFGC
Sbjct: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180

Query: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFL-PSPSHVFVCSAYLN 240
             STKQYKLFRVRTT P     RK ME+DVLRFGNDNKWR LPF  PS SH FVCSAYLN
Sbjct: 181 STSTKQYKLFRVRTTLPNEA-FRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLN 240

Query: 241 GVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFI-- 300
           GVIYWLGK++   N+VVI+A DVETEKFESSTIL+VG ++QE LN+Y F +TIYATFI  
Sbjct: 241 GVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITL 300

Query: 301 -EMTYD-SIQVWKMQEKGSWIPEVLVMDDIPN-HWRDLTII-EALEDRETILCMVNFRFF 360
            + TY   IQ+WKMQ K SW  + ++ +D PN H RDL II EA EDRE    MVNFR F
Sbjct: 301 VDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH---MVNFRIF 360

Query: 361 CFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 401
           CF NSIFGR RKK++  Y+E+   RSIWKIESLNFGSLSNIL+G+ Q
Sbjct: 361 CFSNSIFGRMRKKIVSWYQEE---RSIWKIESLNFGSLSNILAGDSQ 400

[Close]

BLAST of Csa1G015760 vs. TrEMBL
Match: A0A0A0LPC6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.1e-70
Identity = 180/422 (42.65%), Postives = 243/422 (57.58%), Query Frame = 1


Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQF 62
           +ME M    ++M +DWG+ LP  I  TIFSKLVISNLP CR VC+TWNH+VL YAS+TQ 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLH-ANFDLDSELMKSPSLL 122
           Q LT A L+ T+D  +++        CN  M C++ D+R+  +  +FDL+ E +KS SL 
Sbjct: 83  QFLTNAFLLSTSDRMLNY------ELCNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 142

Query: 123 FDGNWSIHII--SQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEY-GYDVIG 182
           F G+W+  I+    CNGL++ I+   +Y   +  GIFNPMTNEF Q+   D +  +   G
Sbjct: 143 FYGDWTFMILLAHPCNGLMF-ISKCSDY--TWCQGIFNPMTNEFFQVSEQDTFDDFYHYG 202

Query: 183 FGCGISTKQYKLFRVRTTFPRG---------GEGRKGMEMDVLRFGND--------NKWR 242
           FG    +KQYKLFRV    P           G       M+VL FG          N+WR
Sbjct: 203 FGLSAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWR 262

Query: 243 YLPFLPSPSHVFVCSAYLNGVIYWLGKVEAK--ENEVVIHAFDVETEKFESSTILDVGLV 302
           +L  L   S   +   YLNG+IYWLGK + K  + E VI+A DVETE+ E S IL V   
Sbjct: 263 HLHNL---SCDLIHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQVQAS 322

Query: 303 DQESLNLYKFKETIYATFI---EMTYDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTII 362
           D +   ++ F  TIYA F    E    +IQVW MQEK SWI +  V+ DI   W  L +I
Sbjct: 323 DGK---MHPFNGTIYALFYINWEKDSRTIQVWSMQEKCSWIRQ-FVIRDISKEWGCLELI 382

Query: 363 EALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNIL 398
           +  ED E IL +++  FFCFY+ +    +K++I + ++K RF  + +IE LNFGSL  IL
Sbjct: 383 KIFEDGE-ILFLIDSDFFCFYHPL--TEKKRIISKNQKKNRF--VCQIECLNFGSLPEIL 423

[Close]

BLAST of Csa1G015760 vs. TrEMBL
Match: A0A0A0LWG1_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1)

HSP 1 Score: 271.9 bits (694), Expect = 1.2e-69
Identity = 185/427 (43.33%), Postives = 249/427 (58.31%), Query Frame = 1


Query: 1   MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDY 60
           ME ME+ I       ++M ++ G+ LP  I  TIFSKLVIS+LP CRLV  TWN +VLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASATQFQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLH-ANFDLDSELM 120
           AS+TQ Q L  A L+ T+D  +++        CN  M C++ D+R+  +  +FDL+SE +
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGLNY------KLCNPKMHCINLDTRQLSNDFDFDLESEFI 120

Query: 121 KSPSLLFDGNWSIHII--SQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEY- 180
           KS SL FDG+W+  II    CNGL+ +I+   +Y   +  GIFNPMTNEF+Q+  H  + 
Sbjct: 121 KSASLQFDGDWTYTIIMAGSCNGLM-LISKCSDY--TWCQGIFNPMTNEFLQVSEHGTFD 180

Query: 181 GYDVIGFGCGISTKQYKLFRVRTTFPRGGEGRKGME-------MDVLRFGND-------- 240
            + + GFG    TKQYKLFRV   F +G   R+          M+VL FG          
Sbjct: 181 DFYLYGFGFSPITKQYKLFRV---FDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPI 240

Query: 241 -NKWRYLPFLPSPSHVFVCSAYLNGVIYWLGKVEAKENE--VVIHAFDVETEKFESSTIL 300
            N+WR L  L  P  +     YLNG+IYWL K + K+ E   VI+A DVETE  E + +L
Sbjct: 241 HNQWRRLHTL--PFEIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVL 300

Query: 301 DVGLVDQESLNLYKFKETIYATF-IEMTYDS--IQVWKMQEKGSWIPEVLVMDDIPNHWR 360
            V         +++F  TIYATF I    DS  IQVW+MQEK SW+ +  V+ DI   W 
Sbjct: 301 QV--PSNGYGKIHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRK-FVICDISREWI 360

Query: 361 DLTIIEALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGS 398
            L +I+  ED E IL M+N  FFCFYN     ++K++I + ++K R+  I +IESLNFG 
Sbjct: 361 HLQLIKMFEDEE-ILFMINMDFFCFYNP--SSKKKRIISKNQKKKRY--ICQIESLNFGR 405

[Close]

BLAST of Csa1G015760 vs. TrEMBL
Match: A0A0A0LSE0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1)

HSP 1 Score: 231.1 bits (588), Expect = 2.4e-57
Identity = 167/397 (42.07%), Postives = 226/397 (56.93%), Query Frame = 1


Query: 15  IMDW-GRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQFQCLTTALLICTN 74
           I DW   LP+ IG TIFSKL++SNLP CR+VC+ WN ++LD+AS+   + LT   ++ T 
Sbjct: 3   ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTC 62

Query: 75  DEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLLFDGNWSIHIISQC 134
           D    F    +  N N  M C+ FD   +L  + DLD EL  + S  F+      +I+ C
Sbjct: 63  DVLHPFPCPDNHTNPN--MHCLRFD---NLDLDLDLDLELEVNKSSSFEAGVVYKLINSC 122

Query: 135 NGLLYVITNNYEYHG--LYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGCGISTKQYKLFR 194
           NGLL +      + G  L   GIFNPMTNEF Q+P HDE      GFG   +TKQYKLFR
Sbjct: 123 NGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVP-HDEIVEYHYGFGFIPATKQYKLFR 182

Query: 195 VRTTFP---RGGEGRKGMEMDVLRFG-------NDNKWRYLPFLPSPSHVFVCSAYLNGV 254
           V   FP   R  E      +DVL FG         ++WR L  L  P  V    A++NGV
Sbjct: 183 V--NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSL--PGGVENHGAHVNGV 242

Query: 255 IYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMTY 314
           IYWLG+ + ++NE V++  DVETEK + S +L+V  V+   +++ +F  T+YA F     
Sbjct: 243 IYWLGEGK-EQNEYVVYTLDVETEKIQLSAVLEV--VNPMWMSIQQFNGTVYAVF--HME 302

Query: 315 DSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIFG 374
           ++ QVW+MQEK SWI +  V+DD      +LT+++A E+ E +LCMV    F  YN   G
Sbjct: 303 EATQVWRMQEKNSWIRD-FVIDDC-----NLTLVKAYENGE-MLCMVKPTVFWLYNPSTG 362

Query: 375 RRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGE 399
              KKV+    EK  F  I  +E LNFGSL NIL+G+
Sbjct: 363 --SKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGD 373

[Close]

BLAST of Csa1G015760 vs. NCBI nr
Match: gi|449441129|ref|XP_004138336.1| (PREDICTED: uncharacterized protein LOC101222225 [Cucumis sativus])

HSP 1 Score: 838.6 bits (2165), Expect = 4.7e-240
Identity = 400/400 (100.00%), Postives = 400/400 (100.00%), Query Frame = 1


Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60

Query: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120
           FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL
Sbjct: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120

Query: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180
           FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC
Sbjct: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180

Query: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG 240
           GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG
Sbjct: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFLPSPSHVFVCSAYLNG 240

Query: 241 VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT 300
           VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT
Sbjct: 241 VIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMT 300

Query: 301 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 360
           YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF
Sbjct: 301 YDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIF 360

Query: 361 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 401
           GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ
Sbjct: 361 GRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 400

[Close]

BLAST of Csa1G015760 vs. NCBI nr
Match: gi|700208689|gb|KGN63785.1| (hypothetical protein Csa_1G015770 [Cucumis sativus])

HSP 1 Score: 590.9 bits (1522), Expect = 1.7e-165
Identity = 301/407 (73.96%), Postives = 336/407 (82.56%), Query Frame = 1


Query: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQ 60
           MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVIS+LPICRLVC+TWNH VLDYASA Q
Sbjct: 1   MEKMEKMICESKKMIMDWGRLPTCIGTTIFSKLVISDLPICRLVCKTWNHTVLDYASAPQ 60

Query: 61  FQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLL 120
           FQCLT ALLICT+DEAIS +DDS K+ CNA MQCM+FDSRKHLHAN DL+ ELMKSPSLL
Sbjct: 61  FQCLTGALLICTHDEAISIVDDSFKLKCNAKMQCMNFDSRKHLHANLDLELELMKSPSLL 120

Query: 121 FDGNWSIHIISQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGC 180
           FDGN SIHII+QCNGLLY+IT +YE HG+ NH IFNPMTNEF+Q+PW DEY YD IGFGC
Sbjct: 121 FDGNRSIHIINQCNGLLYIITVDYECHGMINHEIFNPMTNEFLQVPWTDEYRYDAIGFGC 180

Query: 181 GISTKQYKLFRVRTTFPRGGEGRKGMEMDVLRFGNDNKWRYLPFL-PSPSHVFVCSAYLN 240
             STKQYKLFRVRTT P     RK ME+DVLRFGNDNKWR LPF  PS SH FVCSAYLN
Sbjct: 181 STSTKQYKLFRVRTTLPNEA-FRKRMEIDVLRFGNDNKWRSLPFFQPSSSHKFVCSAYLN 240

Query: 241 GVIYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFI-- 300
           GVIYWLGK++   N+VVI+A DVETEKFESSTIL+VG ++QE LN+Y F +TIYATFI  
Sbjct: 241 GVIYWLGKLKRDRNKVVIYALDVETEKFESSTILEVGRINQEILNIYNFNKTIYATFITL 300

Query: 301 -EMTYD-SIQVWKMQEKGSWIPEVLVMDDIPN-HWRDLTII-EALEDRETILCMVNFRFF 360
            + TY   IQ+WKMQ K SW  + ++ +D PN H RDL II EA EDRE    MVNFR F
Sbjct: 301 VDATYKYPIQIWKMQGKNSWSIQEVLNNDTPNDHSRDLAIIKEAFEDREH---MVNFRIF 360

Query: 361 CFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGECQ 401
           CF NSIFGR RKK++  Y+E+   RSIWKIESLNFGSLSNIL+G+ Q
Sbjct: 361 CFSNSIFGRMRKKIVSWYQEE---RSIWKIESLNFGSLSNILAGDSQ 400

[Close]

BLAST of Csa1G015760 vs. NCBI nr
Match: gi|700208649|gb|KGN63745.1| (hypothetical protein Csa_1G014420 [Cucumis sativus])

HSP 1 Score: 275.4 bits (703), Expect = 1.6e-70
Identity = 180/422 (42.65%), Postives = 243/422 (57.58%), Query Frame = 1


Query: 3   KMEKMICESKKMIMDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQF 62
           +ME M    ++M +DWG+ LP  I  TIFSKLVISNLP CR VC+TWNH+VL YAS+TQ 
Sbjct: 23  QMENMEMGERRMSIDWGKGLPPLIAKTIFSKLVISNLPSCRFVCKTWNHLVLHYASSTQL 82

Query: 63  QCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLH-ANFDLDSELMKSPSLL 122
           Q LT A L+ T+D  +++        CN  M C++ D+R+  +  +FDL+ E +KS SL 
Sbjct: 83  QFLTNAFLLSTSDRMLNY------ELCNPKMHCINLDNRQSSNDVDFDLEWEFIKSGSLQ 142

Query: 123 FDGNWSIHII--SQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEY-GYDVIG 182
           F G+W+  I+    CNGL++ I+   +Y   +  GIFNPMTNEF Q+   D +  +   G
Sbjct: 143 FYGDWTFMILLAHPCNGLMF-ISKCSDY--TWCQGIFNPMTNEFFQVSEQDTFDDFYHYG 202

Query: 183 FGCGISTKQYKLFRVRTTFPRG---------GEGRKGMEMDVLRFGND--------NKWR 242
           FG    +KQYKLFRV    P           G       M+VL FG          N+WR
Sbjct: 203 FGLSAISKQYKLFRVSEAIPYSERFRLMITFGRDDTHYTMEVLTFGRSGTNHIPIHNQWR 262

Query: 243 YLPFLPSPSHVFVCSAYLNGVIYWLGKVEAK--ENEVVIHAFDVETEKFESSTILDVGLV 302
           +L  L   S   +   YLNG+IYWLGK + K  + E VI+A DVETE+ E S IL V   
Sbjct: 263 HLHNL---SCDLIHGVYLNGIIYWLGKEKGKKEKKEYVIYALDVETEQIEMSVILQVQAS 322

Query: 303 DQESLNLYKFKETIYATFI---EMTYDSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTII 362
           D +   ++ F  TIYA F    E    +IQVW MQEK SWI +  V+ DI   W  L +I
Sbjct: 323 DGK---MHPFNGTIYALFYINWEKDSRTIQVWSMQEKCSWIRQ-FVIRDISKEWGCLELI 382

Query: 363 EALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGSLSNIL 398
           +  ED E IL +++  FFCFY+ +    +K++I + ++K RF  + +IE LNFGSL  IL
Sbjct: 383 KIFEDGE-ILFLIDSDFFCFYHPL--TEKKRIISKNQKKNRF--VCQIECLNFGSLPEIL 423

[Close]

BLAST of Csa1G015760 vs. NCBI nr
Match: gi|700210076|gb|KGN65172.1| (hypothetical protein Csa_1G257290 [Cucumis sativus])

HSP 1 Score: 271.9 bits (694), Expect = 1.7e-69
Identity = 185/427 (43.33%), Postives = 249/427 (58.31%), Query Frame = 1


Query: 1   MEKMEKMI----CESKKMIMDWGR-LPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDY 60
           ME ME+ I       ++M ++ G+ LP  I  TIFSKLVIS+LP CRLV  TWN +VLDY
Sbjct: 1   MEDMERQIENMEISERRMTINCGKGLPPLIAKTIFSKLVISDLPSCRLVSNTWNDLVLDY 60

Query: 61  ASATQFQCLTTALLICTNDEAISFLDDSSKVNCNATMQCMDFDSRKHLH-ANFDLDSELM 120
           AS+TQ Q L  A L+ T+D  +++        CN  M C++ D+R+  +  +FDL+SE +
Sbjct: 61  ASSTQLQFLKNAFLLSTSDRGLNY------KLCNPKMHCINLDTRQLSNDFDFDLESEFI 120

Query: 121 KSPSLLFDGNWSIHII--SQCNGLLYVITNNYEYHGLYNHGIFNPMTNEFIQIPWHDEY- 180
           KS SL FDG+W+  II    CNGL+ +I+   +Y   +  GIFNPMTNEF+Q+  H  + 
Sbjct: 121 KSASLQFDGDWTYTIIMAGSCNGLM-LISKCSDY--TWCQGIFNPMTNEFLQVSEHGTFD 180

Query: 181 GYDVIGFGCGISTKQYKLFRVRTTFPRGGEGRKGME-------MDVLRFGND-------- 240
            + + GFG    TKQYKLFRV   F +G   R+          M+VL FG          
Sbjct: 181 DFYLYGFGFSPITKQYKLFRV---FDKGFRCRRTSSTVDTHYTMEVLTFGRSGTNHSIPI 240

Query: 241 -NKWRYLPFLPSPSHVFVCSAYLNGVIYWLGKVEAKENE--VVIHAFDVETEKFESSTIL 300
            N+WR L  L  P  +     YLNG+IYWL K + K+ E   VI+A DVETE  E + +L
Sbjct: 241 HNQWRRLHTL--PFEIVADGVYLNGIIYWLVKEKGKDKEKKYVIYALDVETEHIEMTVVL 300

Query: 301 DVGLVDQESLNLYKFKETIYATF-IEMTYDS--IQVWKMQEKGSWIPEVLVMDDIPNHWR 360
            V         +++F  TIYATF I    DS  IQVW+MQEK SW+ +  V+ DI   W 
Sbjct: 301 QV--PSNGYGKIHQFNGTIYATFHINWEKDSRTIQVWRMQEKDSWVRK-FVICDISREWI 360

Query: 361 DLTIIEALEDRETILCMVNFRFFCFYNSIFGRRRKKVIPRYREKTRFRSIWKIESLNFGS 398
            L +I+  ED E IL M+N  FFCFYN     ++K++I + ++K R+  I +IESLNFG 
Sbjct: 361 HLQLIKMFEDEE-ILFMINMDFFCFYNP--SSKKKRIISKNQKKKRY--ICQIESLNFGR 405

[Close]

BLAST of Csa1G015760 vs. NCBI nr
Match: gi|778664711|ref|XP_011660339.1| (PREDICTED: putative F-box protein At1g32420 [Cucumis sativus])

HSP 1 Score: 231.1 bits (588), Expect = 3.4e-57
Identity = 167/397 (42.07%), Postives = 226/397 (56.93%), Query Frame = 1


Query: 15  IMDW-GRLPTCIGTTIFSKLVISNLPICRLVCRTWNHIVLDYASATQFQCLTTALLICTN 74
           I DW   LP+ IG TIFSKL++SNLP CR+VC+ WN ++LD+AS+   + LT   ++ T 
Sbjct: 3   ITDWVSGLPSDIGKTIFSKLLVSNLPACRVVCKAWNELILDHASSAS-KFLTNDFILFTC 62

Query: 75  DEAISFLDDSSKVNCNATMQCMDFDSRKHLHANFDLDSELMKSPSLLFDGNWSIHIISQC 134
           D    F    +  N N  M C+ FD   +L  + DLD EL  + S  F+      +I+ C
Sbjct: 63  DVLHPFPCPDNHTNPN--MHCLRFD---NLDLDLDLDLELEVNKSSSFEAGVVYKLINSC 122

Query: 135 NGLLYVITNNYEYHG--LYNHGIFNPMTNEFIQIPWHDEYGYDVIGFGCGISTKQYKLFR 194
           NGLL +      + G  L   GIFNPMTNEF Q+P HDE      GFG   +TKQYKLFR
Sbjct: 123 NGLLLIYKLPLCFPGEFLLRVGIFNPMTNEFFQVP-HDEIVEYHYGFGFIPATKQYKLFR 182

Query: 195 VRTTFP---RGGEGRKGMEMDVLRFG-------NDNKWRYLPFLPSPSHVFVCSAYLNGV 254
           V   FP   R  E      +DVL FG         ++WR L  L  P  V    A++NGV
Sbjct: 183 V--NFPLNVRPEEPNSVSHLDVLTFGRSEIIDPKQSQWRRLYSL--PGGVENHGAHVNGV 242

Query: 255 IYWLGKVEAKENEVVIHAFDVETEKFESSTILDVGLVDQESLNLYKFKETIYATFIEMTY 314
           IYWLG+ + ++NE V++  DVETEK + S +L+V  V+   +++ +F  T+YA F     
Sbjct: 243 IYWLGEGK-EQNEYVVYTLDVETEKIQLSAVLEV--VNPMWMSIQQFNGTVYAVF--HME 302

Query: 315 DSIQVWKMQEKGSWIPEVLVMDDIPNHWRDLTIIEALEDRETILCMVNFRFFCFYNSIFG 374
           ++ QVW+MQEK SWI +  V+DD      +LT+++A E+ E +LCMV    F  YN   G
Sbjct: 303 EATQVWRMQEKNSWIRD-FVIDDC-----NLTLVKAYENGE-MLCMVKPTVFWLYNPSTG 362

Query: 375 RRRKKVIPRYREKTRFRSIWKIESLNFGSLSNILSGE 399
              KKV+    EK  F  I  +E LNFGSL NIL+G+
Sbjct: 363 --SKKVLSLRNEKKIFLGICHLE-LNFGSLLNILAGD 373

The following BLAST results are available for this feature:

BLAST of Csa1G015760 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRY6_CUCSA	3.2e-240	100.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015760 PE=4 SV=1	[more]
A0A0A0LPH0_CUCSA	1.2e-165	73.96	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G015770 PE=4 SV=1	[more]
A0A0A0LPC6_CUCSA	1.1e-70	42.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G014420 PE=4 SV=1	[more]
A0A0A0LWG1_CUCSA	1.2e-69	43.33	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G257290 PE=4 SV=1	[more]
A0A0A0LSE0_CUCSA	2.4e-57	42.07	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G011590 PE=4 SV=1	[more]

BLAST of Csa1G015760 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449441129\|ref\|XP_004138336.1\|	4.7e-240	100.00	PREDICTED: uncharacterized protein LOC101222225 [Cucumis sativus]	[more]
gi\|700208689\|gb\|KGN63785.1\|	1.7e-165	73.96	hypothetical protein Csa_1G015770 [Cucumis sativus]	[more]
gi\|700208649\|gb\|KGN63745.1\|	1.6e-70	42.65	hypothetical protein Csa_1G014420 [Cucumis sativus]	[more]
gi\|700210076\|gb\|KGN65172.1\|	1.7e-69	43.33	hypothetical protein Csa_1G257290 [Cucumis sativus]	[more]
gi\|778664711\|ref\|XP_011660339.1\|	3.4e-57	42.07	PREDICTED: putative F-box protein At1g32420 [Cucumis sativus]	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR013187	F-box-assoc_dom_typ3
IPR017451	F-box-assoc_interact_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csa1G015760.1	Csa1G015760.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001810	F-box domain	PFAM	PF00646	F-box	coord: 16..52 score: 1.
IPR001810	F-box domain	unknown	SSF81383	F-box domain	coord: 18..64 score: 4.7
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 237..346 score: 1.
IPR017451	F-box associated interaction domain	TIGRFAMs	TIGR01640	TIGR01640	coord: 131..349 score: 9.6
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 17..54 score: 3.
None	No IPR available	PANTHER	PTHR32133	FAMILY NOT NAMED	coord: 5..365 score: 6.9

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Csa1G015760	Lsi06G014040	Bottle gourd (USVL1VR-Ls)	culsiB061
Csa1G015760	CSPI01G03430	Wild cucumber (PI 183967)	cpicuB000
Csa1G015760	Cucsa.198720	Cucumber (Gy14) v1	cgycuB299

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Csa1G015760	Wax gourd	cuwgoB114
Csa1G015760	Cucumber (Chinese Long) v2	cucuB000
Csa1G015760	Cucumber (Gy14) v1	cgycuB405
Csa1G015760	Cucurbita maxima (Rimu)	cmacuB061
Csa1G015760	Cucurbita maxima (Rimu)	cmacuB087
Csa1G015760	Cucurbita maxima (Rimu)	cmacuB110
Csa1G015760	Cucurbita maxima (Rimu)	cmacuB221
Csa1G015760	Cucurbita maxima (Rimu)	cmacuB393
Csa1G015760	Cucurbita maxima (Rimu)	cmacuB686
Csa1G015760	Cucurbita moschata (Rifu)	cmocuB076
Csa1G015760	Cucurbita moschata (Rifu)	cmocuB050
Csa1G015760	Cucurbita moschata (Rifu)	cmocuB095
Csa1G015760	Cucurbita moschata (Rifu)	cmocuB207
Csa1G015760	Cucurbita moschata (Rifu)	cmocuB385
Csa1G015760	Melon (DHL92) v3.5.1	cumeB010
Csa1G015760	Melon (DHL92) v3.5.1	cumeB055
Csa1G015760	Watermelon (Charleston Gray)	cuwcgB058
Csa1G015760	Watermelon (Charleston Gray)	cuwcgB082
Csa1G015760	Watermelon (97103) v1	cuwmB063
Csa1G015760	Watermelon (97103) v1	cuwmB095
Csa1G015760	Cucurbita pepo (Zucchini)	cpecuB033
Csa1G015760	Cucurbita pepo (Zucchini)	cpecuB352
Csa1G015760	Cucurbita pepo (Zucchini)	cpecuB381
Csa1G015760	Cucurbita pepo (Zucchini)	cpecuB509
Csa1G015760	Cucurbita pepo (Zucchini)	cpecuB643
Csa1G015760	Bottle gourd (USVL1VR-Ls)	culsiB025
Csa1G015760	Bottle gourd (USVL1VR-Ls)	culsiB071
Csa1G015760	Cucumber (Gy14) v2	cgybcuB001
Csa1G015760	Cucumber (Gy14) v2	cgybcuB005
Csa1G015760	Melon (DHL92) v3.6.1	cumedB047
Csa1G015760	Silver-seed gourd	carcuB0416
Csa1G015760	Silver-seed gourd	carcuB0491
Csa1G015760	Silver-seed gourd	carcuB0543
Csa1G015760	Silver-seed gourd	carcuB0621
Csa1G015760	Silver-seed gourd	carcuB0622
Csa1G015760	Watermelon (97103) v2	cuwmbB055
Csa1G015760	Watermelon (97103) v2	cuwmbB079