Csa1G013800 (gene) Cucumber (Chinese Long) v2

NameCsa1G013800
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionReplication protein A 70 kDa DNA-binding subunit; contains IPR004591 (Replication factor-a protein 1 Rpa1)
LocationChr1 : 1823926 .. 1827666 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCTCTCTCTCTCTCGCTTTCTCTTAGTTCTCACTTGCTTTTTTATTTCACGTACTCTACTCTCGTGCAATGGCGAGCGCACCAACTGCTGGCGGAATATCAAAGGTTTTGTCCAATCCATCACCGGACTCCCCCTCCGATGTCCCCGATGTTGTGGTTCAGGTCATTGATCTTAAGGCGACGGGAAATCGCTACATGTGAGTTTCCGTTCACTAATAACTCTGATTAGTACTCTGTTTTTGTGTATATTTGCTTGCAATGTGTGAGGTTCGCTTTTGGCTTTGACCTAAGTCTGATGAAGTTCTTATTTAGACGATTTGAAAATGAAAGTATGGTTTGGATCTTAGTGTTTGGGTTGTTTGTTATATATTCTGCTTATGGTTTTGATTTTGCAGCTCAGGGTATGTGAGTTTTCTTTTGCTCTGAATTTTGATTTATACTTTGTCGTCATGTATGTTTGCTCACACTGTGTGAGATTCACTTTTGGTTCTGGCCTAAGTTTGGTGAAGTTCTTGTTTAGATGACTGGAAGTTGAAAGTATGGTTTAAATCTTTGTGACTGTGTTGTTTGTAATATAGAGTGTTTATGGCTTTGAATTTGTAGCCTAGGTCACGTGAGTTTTCTTTCATTAAGAACTCTGATTAGTACTCTGTTATGCATATTTGCTCGCACTGTGTGAGGTTCGCCTTTGGGTTTGACCTAAGATTGGTGAAGATCTTATTTAGATGACTGGAAGTTGAAGCTATGATTTAGATCTTAGTGATTGTGTTGCTTGTGATATAGGGTGTTTATGGTTTTGAATTTGCATCCTAGCGTGTATACTGATTGGCCTGCAATATGATTTTTGTTTGTTTGAAATAGTTGACGATTTAAAGATGGGTGAGGTTTCTGTTGTTTTAAATGAAGATTTAAAGGCTATACTGACTAATTTCTTTTTGCTTCACATTCAGGTTTACTGCTAGTGACGGTGTCATGAAGCTTAAAGCTATTCTTCCATCGAATTTGACTTCTGACGTCATTTCTGGAAACATTCAAAATTTGGGGCTTATTCGCATTCTTGACTACTCTCTCAATGATATTCCAAACAAGTCAGAAAAGTGAGTATAATCAATCAAAATTTGTATAATAAACTCGTGTTAGATACCTGATACTAGAAAGCGTTCCTCTAGTTAATTTTCTTTTGGTTCTGTTTTGTAACAAGTGATGCTTTTCTTAATATTAGGTATTTAATCGTGACAAAATGTGAGGTGGTTTCTCCTGCTCTAGAAAAGGAGGTAAAAACTGAGGTTAAGACAGAGGAAGCAGGTACTATTTTAAAACCGAAGGTAGAGCTTGACGATAAGAGCACATTTAACAATGGTTCTGGTATTATTCTGAAACCAAAGCAAGAATTGGTTGCTAAATCAGCTGCTCAGATTGTACACGAGCAGCGTATGAAGTGAGTACGCTATATTTGAAAAAGGATTTATTGGACTTTGTTATCAAGTTCCTAGACTTTTTGTGATAATATATATTTAAATGCTTCTGTTTTTCAATGTGCAGCATGGCACCAGCTGCCCGGATGTCCATGACAAGGCGAGTTCAGCCCCTTGTCTACTTAAACCCTTACCTGGGAGATTGGACCATCAAAGTTCGTGTTACTGACAAGGGAAACCTGCGTACATACAAAAATGCTCAAGGAGAAGGTTGTGTTTTCAATGTGGTGTTGACAGATGAAGATGTAAGCTAACTGCTGCTTTGTTGAAGTCTTGGTATTTTTTTACTGAAACAATAGCATTTTCTAGTCTCATGTTGATATCCATGTGAACTAACTTGGTTCTTCTGGTTCAGGGTACACAAATACAGGCAACGATGTTCAATGATGCTGCAAGGAAGTTCTATGAAAAGTTTTCCCTCGGCAAAGTCTATTATGTTTCCAGGGGAACTTTGAAAGTTGCCAATAAGAAATTCAAGACAGTTCAAAATGATTATGAAATGACTTTGAATGTGAATTCTCAAGTAGACGAGGTCAGCAATGAAGCTGCTTTTGTTCCTGAAACAAAATATAATTTTGTCAAGATTGATATGTTAGGTCCTCACGTGAATGGAAGAGATCTCGTTGGTAAGAATCCAGCCCTAGCCTAAATAATTTATCCTCGCATGATTTTATTTTATTTTTTCACTTAGAAGGTTCACATGTGTTTTTGCGACTGCCAGATGTAATTGGAGTTGTTCAAAATGTTTCTTCTACAATGAGCATTCGAAGAAAAATCAACAATGAGACAGCTCCAAAACGTGATGTAACCATTGCTGATGAAACGTGAGTAGATATTTTCTATTGATGAAAATGAGAATTGTTGTCTATTTAATTAATTCATATTAACGTTGTGAGTATTAAATCGCAGGAAGAAGACAGTTGTGATATCTTTGTGGAATGATCTTGCAACCACTGTGGGGCAGGAGTTGCTTGACATTGCCGACCAATCTCCTATAATCGCATTGAAATATCTTAGAGTTGGAGACTTTCAAGGTACTGCTAAAATTGAAGTGGGAACTCATGTCTTCTGTGGCGAGGTGCCTACATGTACTTAACATATTATTTGCTTCCAATTTCAGGTGTATCTTTGTCGACAATAAGCAGGAGCTCAATTACAATAAACCCAGACATAAAGGAAGCACATGATTTGAGATCATGGTATGGTTACAAAGTACAAATGGTGTTACTACCGTAACATTATTTACTCTAGTTGTAATCATTCTATTATATGCTTACAGGTATGACTCTGAAGGTAAAGCCGTATCCATGTCTTCTGTAAGCTCCGGCCTGAGCCCATCAACCAAGAGCGGTTCTAGGTCCATGTACTCTGACCGGATTTCCTTATCTCATATACTCGAAAACAAATCTTTGGGAGAAGAAAAGGTAACATATAATCTTCAAAATAAAGAAAGTGAAAATTCTATGTAGAACAAAACTACTAAATGCATGGTTTAAGAATTCTATGCCAAAAAATAACATGAAGTTATTGTCTCCACAGCCCACGTTCTTTAGCATTAGAGCATATGTCAGCTTTATCAAACCCGATCAAACAATGTGGTATCGTGCTTGCAAAACATGCAACAAGAAGGTGACTGAAGCCATCGGATCTGGATATTGGTGTGACAATTGCCAGAAAAACGATGAAGAATGCAGTTTAAGGTACATAATGGTTGTGAGAGTATCTGATGCAAGTGGTGAAGCTTGGGTCTCTACATTCAACGAAGAAGCAGAGAGAATTATGGGATGCTCTGCTGATGAACTTGATCAGCTCAAATCGCAGGTAAACAAACCATACAACACAATCAACTTTGTTGAAAACTAGAAAGAAAAAAAGCAAGTAGGTTGATCTATACATCATATTTTCATTTTCAGATTGGTGAGGAGAATTCATATCAACTTAAACTCAAAGAAGCCACATGGGTTCCCCACTTGTTTCGAGTTAGCGTTTCTCAGAACGAATACAACAATGAGAAGAGACAAAGGATCACCGTCAGGTCAGTTGCTCCAGTTGATTTTGCTGCTGAGTCCAGATTTTTGCTAGAAGAGATAGCAAAAATGAAAGCTTCGTAAAAAGAGTTCATGACAAACCCATGACTATCTTAATTAACTTTAGGACTTTAGTAGAAAATGTAAATTAAAGCATCAATTTAACATCCTTTTTTTTTTGTTGGTAGTAGAGACCTTGGGGAATGTTTTTATTTACCATATCATGTTTTTTTGCTTATA

mRNA sequence

ATGGCGAGCGCACCAACTGCTGGCGGAATATCAAAGGTTTTGTCCAATCCATCACCGGACTCCCCCTCCGATGTCCCCGATGTTGTGGTTCAGGTCATTGATCTTAAGGCGACGGGAAATCGCTACATGTTTACTGCTAGTGACGGTGTCATGAAGCTTAAAGCTATTCTTCCATCGAATTTGACTTCTGACGTCATTTCTGGAAACATTCAAAATTTGGGGCTTATTCGCATTCTTGACTACTCTCTCAATGATATTCCAAACAAGTCAGAAAAGTATTTAATCGTGACAAAATGTGAGGTGGTTTCTCCTGCTCTAGAAAAGGAGGTAAAAACTGAGGTTAAGACAGAGGAAGCAGGTACTATTTTAAAACCGAAGGTAGAGCTTGACGATAAGAGCACATTTAACAATGGTTCTGGTATTATTCTGAAACCAAAGCAAGAATTGGTTGCTAAATCAGCTGCTCAGATTGTACACGAGCAGCGTATGAACATGGCACCAGCTGCCCGGATGTCCATGACAAGGCGAGTTCAGCCCCTTGTCTACTTAAACCCTTACCTGGGAGATTGGACCATCAAAGTTCGTGTTACTGACAAGGGAAACCTGCGTACATACAAAAATGCTCAAGGAGAAGGTTGTGTTTTCAATGTGGTGTTGACAGATGAAGATGGTACACAAATACAGGCAACGATGTTCAATGATGCTGCAAGGAAGTTCTATGAAAAGTTTTCCCTCGGCAAAGTCTATTATGTTTCCAGGGGAACTTTGAAAGTTGCCAATAAGAAATTCAAGACAGTTCAAAATGATTATGAAATGACTTTGAATGTGAATTCTCAAGTAGACGAGGTCAGCAATGAAGCTGCTTTTGTTCCTGAAACAAAATATAATTTTGTCAAGATTGATATGTTAGGTCCTCACGTGAATGGAAGAGATCTCGTTGATGTAATTGGAGTTGTTCAAAATGTTTCTTCTACAATGAGCATTCGAAGAAAAATCAACAATGAGACAGCTCCAAAACGTGATGTAACCATTGCTGATGAAACGAAGAAGACAGTTGTGATATCTTTGTGGAATGATCTTGCAACCACTGTGGGGCAGGAGTTGCTTGACATTGCCGACCAATCTCCTATAATCGCATTGAAATATCTTAGAGTTGGAGACTTTCAAGGTGTATCTTTGTCGACAATAAGCAGGAGCTCAATTACAATAAACCCAGACATAAAGGAAGCACATGATTTGAGATCATGGTATGACTCTGAAGGTAAAGCCGTATCCATGTCTTCTGTAAGCTCCGGCCTGAGCCCATCAACCAAGAGCGGTTCTAGGTCCATGTACTCTGACCGGATTTCCTTATCTCATATACTCGAAAACAAATCTTTGGGAGAAGAAAAGCCCACGTTCTTTAGCATTAGAGCATATGTCAGCTTTATCAAACCCGATCAAACAATGTGGTATCGTGCTTGCAAAACATGCAACAAGAAGGTGACTGAAGCCATCGGATCTGGATATTGGTGTGACAATTGCCAGAAAAACGATGAAGAATGCAGTTTAAGGTACATAATGGTTGTGAGAGTATCTGATGCAAGTGGTGAAGCTTGGGTCTCTACATTCAACGAAGAAGCAGAGAGAATTATGGGATGCTCTGCTGATGAACTTGATCAGCTCAAATCGCAGATTGGTGAGGAGAATTCATATCAACTTAAACTCAAAGAAGCCACATGGGTTCCCCACTTGTTTCGAGTTAGCGTTTCTCAGAACGAATACAACAATGAGAAGAGACAAAGGATCACCGTCAGGTCAGTTGCTCCAGTTGATTTTGCTGCTGAGTCCAGATTTTTGCTAGAAGAGATAGCAAAAATGAAAGCTTCGTAA

Coding sequence (CDS)

ATGGCGAGCGCACCAACTGCTGGCGGAATATCAAAGGTTTTGTCCAATCCATCACCGGACTCCCCCTCCGATGTCCCCGATGTTGTGGTTCAGGTCATTGATCTTAAGGCGACGGGAAATCGCTACATGTTTACTGCTAGTGACGGTGTCATGAAGCTTAAAGCTATTCTTCCATCGAATTTGACTTCTGACGTCATTTCTGGAAACATTCAAAATTTGGGGCTTATTCGCATTCTTGACTACTCTCTCAATGATATTCCAAACAAGTCAGAAAAGTATTTAATCGTGACAAAATGTGAGGTGGTTTCTCCTGCTCTAGAAAAGGAGGTAAAAACTGAGGTTAAGACAGAGGAAGCAGGTACTATTTTAAAACCGAAGGTAGAGCTTGACGATAAGAGCACATTTAACAATGGTTCTGGTATTATTCTGAAACCAAAGCAAGAATTGGTTGCTAAATCAGCTGCTCAGATTGTACACGAGCAGCGTATGAACATGGCACCAGCTGCCCGGATGTCCATGACAAGGCGAGTTCAGCCCCTTGTCTACTTAAACCCTTACCTGGGAGATTGGACCATCAAAGTTCGTGTTACTGACAAGGGAAACCTGCGTACATACAAAAATGCTCAAGGAGAAGGTTGTGTTTTCAATGTGGTGTTGACAGATGAAGATGGTACACAAATACAGGCAACGATGTTCAATGATGCTGCAAGGAAGTTCTATGAAAAGTTTTCCCTCGGCAAAGTCTATTATGTTTCCAGGGGAACTTTGAAAGTTGCCAATAAGAAATTCAAGACAGTTCAAAATGATTATGAAATGACTTTGAATGTGAATTCTCAAGTAGACGAGGTCAGCAATGAAGCTGCTTTTGTTCCTGAAACAAAATATAATTTTGTCAAGATTGATATGTTAGGTCCTCACGTGAATGGAAGAGATCTCGTTGATGTAATTGGAGTTGTTCAAAATGTTTCTTCTACAATGAGCATTCGAAGAAAAATCAACAATGAGACAGCTCCAAAACGTGATGTAACCATTGCTGATGAAACGAAGAAGACAGTTGTGATATCTTTGTGGAATGATCTTGCAACCACTGTGGGGCAGGAGTTGCTTGACATTGCCGACCAATCTCCTATAATCGCATTGAAATATCTTAGAGTTGGAGACTTTCAAGGTGTATCTTTGTCGACAATAAGCAGGAGCTCAATTACAATAAACCCAGACATAAAGGAAGCACATGATTTGAGATCATGGTATGACTCTGAAGGTAAAGCCGTATCCATGTCTTCTGTAAGCTCCGGCCTGAGCCCATCAACCAAGAGCGGTTCTAGGTCCATGTACTCTGACCGGATTTCCTTATCTCATATACTCGAAAACAAATCTTTGGGAGAAGAAAAGCCCACGTTCTTTAGCATTAGAGCATATGTCAGCTTTATCAAACCCGATCAAACAATGTGGTATCGTGCTTGCAAAACATGCAACAAGAAGGTGACTGAAGCCATCGGATCTGGATATTGGTGTGACAATTGCCAGAAAAACGATGAAGAATGCAGTTTAAGGTACATAATGGTTGTGAGAGTATCTGATGCAAGTGGTGAAGCTTGGGTCTCTACATTCAACGAAGAAGCAGAGAGAATTATGGGATGCTCTGCTGATGAACTTGATCAGCTCAAATCGCAGATTGGTGAGGAGAATTCATATCAACTTAAACTCAAAGAAGCCACATGGGTTCCCCACTTGTTTCGAGTTAGCGTTTCTCAGAACGAATACAACAATGAGAAGAGACAAAGGATCACCGTCAGGTCAGTTGCTCCAGTTGATTTTGCTGCTGAGTCCAGATTTTTGCTAGAAGAGATAGCAAAAATGAAAGCTTCGTAA

Protein sequence

MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSNLTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAGTILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIAKMKAS*
BLAST of Csa1G013800 vs. Swiss-Prot
Match: RFA1B_ARATH (Replication protein A 70 kDa DNA-binding subunit B OS=Arabidopsis thaliana GN=RPA1B PE=3 SV=1)

HSP 1 Score: 863.2 bits (2229), Expect = 1.7e-249
Identity = 423/624 (67.79%), Postives = 513/624 (82.21%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           M ++ T  GI+ VL+N S DS S  P++VVQV+DLK  GNRY F+A+DG MK+KA+LP+ 
Sbjct: 1   MENSVTQDGIATVLANQSLDSSSVRPEIVVQVVDLKPAGNRYTFSANDGKMKIKAMLPAT 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSE-KYLIVTKCEVVSPALEKEVKTEVKTEEA 120
           LTSD+ISG IQNLGLIR+L+Y++NDIP KSE KY+++TKCE V+ AL+ E+K E+K    
Sbjct: 61  LTSDIISGKIQNLGLIRLLEYTVNDIPGKSEEKYMLITKCEAVASALDSEIKAEIKAS-- 120

Query: 121 GTILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQP 180
                              +GI+LKPK E VAKSA+QI++EQR N APAARM+MTRRV P
Sbjct: 121 -------------------TGIMLKPKHEFVAKSASQIINEQRGNAAPAARMAMTRRVHP 180

Query: 181 LVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKF 240
           LV LNPY G WTIKVRVT+KG +RTYKNA+GEGCVFNV LTDE+GTQIQATMFN AARKF
Sbjct: 181 LVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKF 240

Query: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVK 300
           Y++F +GKVYY+SRG+LK+ANK+FKTVQNDYEMTLN NS+V+E SNE  F PETK+NFV 
Sbjct: 241 YDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVP 300

Query: 301 IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWND 360
           ID LG +VN +DL+DVIGVVQ+VS TMSIRRK +NE  PKRD+T+ADETKKTVV+SLWND
Sbjct: 301 IDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWND 360

Query: 361 LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDS 420
           LAT +GQELLD+AD  P+IA+K L+VG FQGVSLSTISRS++ INP+  EA  L+SWYD+
Sbjct: 361 LATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDA 420

Query: 421 EGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKP 480
           EGK  SMS++ SG+S S  +GSRSMYSDR+ LSHI  N SLGEEKP FFS RAY+SFIKP
Sbjct: 421 EGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNE 540
           DQTMWYRACKTCNKKVTEA+ SGYWC++CQK D+ECSLRYIM V+VSD++GE W+S FN+
Sbjct: 481 DQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFND 540

Query: 541 EAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600
           EAE+I+GC+AD+L+ LKS+ GE N +Q KLKEATW  HLFR+SVSQ EYN+EKRQRITVR
Sbjct: 541 EAEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVR 600

Query: 601 SVAPVDFAAESRFLLEEIAKMKAS 624
            V+P+DFAAE+R LL++I+K K S
Sbjct: 601 GVSPIDFAAETRLLLQDISKNKTS 603

BLAST of Csa1G013800 vs. Swiss-Prot
Match: RFA1D_ARATH (Replication protein A 70 kDa DNA-binding subunit D OS=Arabidopsis thaliana GN=RPA1D PE=2 SV=1)

HSP 1 Score: 854.4 bits (2206), Expect = 8.0e-247
Identity = 417/622 (67.04%), Postives = 518/622 (83.28%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           M ++ T   IS VLSNPS DS SD  ++VVQV+DLK  GNRY F+A+DG  K+KA+  ++
Sbjct: 1   MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGNRYTFSANDGKTKVKAMFTAS 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKT--EE 120
           LT ++ISG IQNLGLIR++D+++NDI +KS KY +VTKCE V   L+ E+  + K+  EE
Sbjct: 61  LTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFLVTKCEAVGSVLDSEINLDSKSGEEE 120

Query: 121 AGTILKPKVELDDKSTFNN--GSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRR 180
           A    K K+E    S  N+   +GI LKPKQE VAKSA+QI+ EQR N APAARM+MTRR
Sbjct: 121 AREPKKQKLEHSPVSPLNDVVSTGITLKPKQEFVAKSASQIMSEQRGNAAPAARMAMTRR 180

Query: 181 VQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAA 240
           V PLV LNPY G+WTIKVRVT+KG +R YKNA+GEGCVFNV LTDE+GTQIQATMFNDAA
Sbjct: 181 VHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAA 240

Query: 241 RKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYN 300
           RKF+++F LGKVYY+SRG+LK+ANK+FKTVQNDYEMTLN NS+V+E S+E  F+PETK+N
Sbjct: 241 RKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFN 300

Query: 301 FVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISL 360
           FV I+ LG +VN ++L+D+IGVVQ+VS TMSIRR+ +NE  PKRD+T+ADE++KTVV+SL
Sbjct: 301 FVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSL 360

Query: 361 WNDLATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSW 420
           WNDLAT +GQELLD+ADQSP+IA+K L+VGDFQGVSLSTISRS++ INP+  EA  L+SW
Sbjct: 361 WNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSW 420

Query: 421 YDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSF 480
           +DSEGK +SMSS+ SG+SPS K+GSRS+Y+DR+ LSHI  N SL EEKP FFS RAY+SF
Sbjct: 421 FDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISF 480

Query: 481 IKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVST 540
           IKPDQTMWY+ACKTCNKKVTEA+ SGYWC+ CQ+  EECSLRYIM V+V+D+SGE W+S+
Sbjct: 481 IKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISS 540

Query: 541 FNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRI 600
           FN+EAE+I+GCSADEL++LKS+ GE N YQ KLKEATW  H+FRVSV+QNEYN EKRQR+
Sbjct: 541 FNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRV 600

Query: 601 TVRSVAPVDFAAESRFLLEEIA 619
           TV+ VAP+DFAAE+R LL++I+
Sbjct: 601 TVKGVAPLDFAAETRLLLQDIS 622

BLAST of Csa1G013800 vs. Swiss-Prot
Match: RFA1B_ORYSJ (Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japonica GN=RPA1B PE=1 SV=1)

HSP 1 Score: 814.7 bits (2103), Expect = 7.0e-235
Identity = 406/626 (64.86%), Postives = 500/626 (79.87%), Query Frame = 1

Query: 2   ASAPTAGGISKVLSNPSPDSPSDVP--DVVVQVIDLKATGNRYMFTASDGVMKLKAILPS 61
           A + T G ++ VL N SPD+ + VP  ++V+QV+DLK  G R+ F ASDG  K+K +L +
Sbjct: 6   APSVTPGAVAFVLENASPDAATGVPVPEIVLQVVDLKPIGTRFTFLASDGKDKIKTMLLT 65

Query: 62  NLTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEA 121
            L  +V SGNIQNLG+IR+LDY+ N I  K EK LI+TK EVV  AL+ E+K E + +E 
Sbjct: 66  QLAPEVRSGNIQNLGVIRVLDYTCNTIGEKQEKVLIITKLEVVFKALDSEIKCEAEKQEE 125

Query: 122 --GTILKPKVELDDKSTFNNGSG---IILKPKQELVAKSAAQIVHEQRMNMAPAARMSMT 181
               +L PK E    S   N      ++LKPKQE+  KSA+QIV+EQR N APAAR++MT
Sbjct: 126 KPAILLSPKEESVVLSKPTNAPPLPPVVLKPKQEV--KSASQIVNEQRGNAAPAARLAMT 185

Query: 182 RRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFND 241
           RRV PL+ LNPY G+W IKVRVT KGNLRTYKNA+GEGCVFNV LTD DGTQIQATMFN+
Sbjct: 186 RRVHPLISLNPYQGNWIIKVRVTSKGNLRTYKNARGEGCVFNVELTDVDGTQIQATMFNE 245

Query: 242 AARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETK 301
           AA+KFY  F LGKVYY+S+G+L+VANK+FKTV NDYEMTLN N+ V+E   E  F+P+ +
Sbjct: 246 AAKKFYPMFELGKVYYISKGSLRVANKQFKTVHNDYEMTLNENAVVEEAEGET-FIPQIQ 305

Query: 302 YNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVI 361
           YNFVKID LGP+V GR+LVDVIGVVQ+VS T+S+RRKI+NET PKRD+ +AD++ KTV I
Sbjct: 306 YNFVKIDQLGPYVGGRELVDVIGVVQSVSPTLSVRRKIDNETIPKRDIVVADDSSKTVTI 365

Query: 362 SLWNDLATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLR 421
           SLWNDLATT GQELLD+ D +PIIA+K L+V DFQG+SLST+ RS+I +NPD+ EA  LR
Sbjct: 366 SLWNDLATTTGQELLDMVDSAPIIAIKSLKVSDFQGLSLSTVGRSTIVVNPDLPEAEQLR 425

Query: 422 SWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYV 481
           +WYDSEGK  SM+S+ S +  S   G+RSMYSDR+ LSHI  + +LG++KP FFS+ AY+
Sbjct: 426 AWYDSEGKGTSMASIGSDMGASRVGGARSMYSDRVFLSHITSDPNLGQDKPVFFSLNAYI 485

Query: 482 SFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWV 541
           S IKPDQTMWYRACKTCNKKVTEAIGSGYWC+ CQKND ECSLRYIMV++VSD +GEAW+
Sbjct: 486 SLIKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDAECSLRYIMVIKVSDPTGEAWL 545

Query: 542 STFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQ 601
           S FN++AERI+GCSADELD+++ + G++ SY LKLKEATWVPHLFRVSV+QNEY NEKRQ
Sbjct: 546 SLFNDQAERIVGCSADELDRIRKEEGDD-SYLLKLKEATWVPHLFRVSVTQNEYMNEKRQ 605

Query: 602 RITVRSVAPVDFAAESRFLLEEIAKM 621
           RITVRS APVD AAE++++LEEIAK+
Sbjct: 606 RITVRSEAPVDHAAEAKYMLEEIAKL 627

BLAST of Csa1G013800 vs. Swiss-Prot
Match: RFA1A_ARATH (Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana GN=RPA1A PE=1 SV=1)

HSP 1 Score: 322.0 bits (824), Expect = 1.4e-86
Identity = 195/627 (31.10%), Postives = 330/627 (52.63%), Query Frame = 1

Query: 29  VVQVIDLKATGN-------RYMFTASDGVMKLKAILPSNLTSDVISGNIQNLGLIRILDY 88
           ++QV+++K  G        RY F  SDGV    A++   L   V SG  +   +++++DY
Sbjct: 23  LLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDY 82

Query: 89  SLNDIPNKSEKYLIVTKCEVV--------SPALEKEVKTEVKTEEAGT----------IL 148
             +D+  K  K ++V   E +        +P +  E  TE +   +GT            
Sbjct: 83  ICSDV--KGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFN 142

Query: 149 KPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHE---QRMNMAPAARMSMTRRVQPL 208
           +P V+         G  I  +       + + Q  ++      N  P  +     RV P+
Sbjct: 143 EPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPASYRNHGPIMKNEAPARVIPI 202

Query: 209 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 268
             LNPY G W IK RVT KG++R Y NA+G+G VF+  L D DG +I+ T FN    +FY
Sbjct: 203 AALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFY 262

Query: 269 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI 328
           +   +GKVY +S+G+LK A K F  ++N++E+ L   S V+   +E   +P+ +++F  I
Sbjct: 263 DVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPI 322

Query: 329 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 388
             +  +     ++DVIGVV +V+ ++ I RK   ET  +R + + DE+ K V ++LW + 
Sbjct: 323 SDI-ENAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGEF 382

Query: 389 ATTVGQELLDIADQS--PIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYD 448
               G++L ++ D +  P++A+K  +V DF G S+ TIS + + INPD  EAH LR+W+D
Sbjct: 383 CNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFD 442

Query: 449 SEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIK 508
             GK     + S  +S  T  G  S    R ++S I E      +KP + +++A +SFIK
Sbjct: 443 YGGK----DTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIK 502

Query: 509 PDQTMWYRAC------KTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEA 568
            D +  Y AC      K CNKKVT +  + + CD C +  +EC  RY++ V++ D +G  
Sbjct: 503 TD-SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLT 562

Query: 569 WVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEK 620
           W++ F E  E IMGC A +L  +K ++ +E  +   +++  +  ++ ++ + +  Y +E+
Sbjct: 563 WITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQ 622

BLAST of Csa1G013800 vs. Swiss-Prot
Match: RFA1A_ORYSJ (Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica GN=RPA1A PE=1 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 4.9e-79
Identity = 201/673 (29.87%), Postives = 333/673 (49.48%), Query Frame = 1

Query: 6   TAGGISKVLSNPSPDSPSDVPDVVVQVIDLKAT---------GNRYMFTASDGVMKLKAI 65
           T  G++  L+  +   P      V+Q+++L+           G R+    SDG     A+
Sbjct: 7   TPNGVAAALAGDTNLKP------VLQIVELRGVQVNGAGVTRGERFRAVVSDGTAASSAL 66

Query: 66  LPSNLTSDVISGN-------------IQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVV- 125
             + L+    SG              I  +G  RI+     ++        +V++CE++ 
Sbjct: 67  FAAQLSDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEV--------LVSECEIIG 126

Query: 126 SPALEKEVKTEVKT------------------EEAGTILKPK--VELDDKSTFNNGSGII 185
           +P    E  + +                      + T  KP   V L   S   N S   
Sbjct: 127 NPTALSETGSPIPNPTRVEQFNGAPQYGLMAGNSSNTTTKPSDNVPLFQNSMAGNSSNFA 186

Query: 186 LKPKQEL-VAKSAAQIVHEQRMNM---APAARMSMTRRVQPLVYLNPYLGDWTIKVRVTD 245
            +P  ++ V +   Q  +    N        +     R+ P+  LNPY G W IK RVT 
Sbjct: 187 TRPSDKVPVFQPTVQPSYRPAPNYKNHGAIMKNEAPARIIPISALNPYQGRWAIKARVTA 246

Query: 246 KGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLKV 305
           KG++R Y NA+G+G VF+  L D DG +I+ T FN    +FYE   +GKVY VSRG L+ 
Sbjct: 247 KGDIRRYHNAKGDGKVFSFDLLDSDGGEIRVTCFNALLDRFYEVVEVGKVYVVSRGNLRP 306

Query: 306 ANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGV 365
           A K +  + N++E+ L   S VD   +E + +P  +++F  I+ +    N   ++D+IGV
Sbjct: 307 AQKNYNHLNNEWEILLENGSTVDLCPDENSSIPTQRFDFRPINEIEDAQNNA-ILDIIGV 366

Query: 366 VQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQS--P 425
           V +V+   +I+RK   ET  KR + + D + ++V +++W D     G +L  + ++   P
Sbjct: 367 VTSVNPCTTIQRKNGMET-QKRTMNLKDMSGRSVEVTMWGDFCNREGSQLQGMVERGIFP 426

Query: 426 IIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPS 485
           ++A+K  +V DF G S+ TIS + + INPD  EAH LR W+DS G+  S  S+S  ++P 
Sbjct: 427 VLAVKAGKVSDFSGKSVGTISSTQLFINPDSAEAHSLRQWFDSGGRDASTQSISRDITP- 486

Query: 486 TKSGSRSMYSDRISLSHILENKSLG-EEKPTFFSIRAYVSFIKPDQTMWYRAC------K 545
               SR+     ++    ++++ LG  +KP + +++A V F K +++ +Y AC      +
Sbjct: 487 --GASRNEIRKTVAQ---IKDEGLGMGDKPDWITVKATVIFFK-NESFFYTACPNMIGDR 546

Query: 546 TCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSA 605
            CNKKVT++    + CD C +  EEC  RY++  ++ D SG AWV+ F E  + ++GCSA
Sbjct: 547 QCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTAWVTAFQEAGQELLGCSA 606

Query: 606 DELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAE 623
            EL+ LK +  E+  +   +    +  +L R+ V +  Y +E++ + T   V  VD + E
Sbjct: 607 TELNALKER--EDPRFADTMLNCLFQEYLLRLKVKEESYGDERKVKNTAVKVEKVDPSGE 654

BLAST of Csa1G013800 vs. TrEMBL
Match: W9SG43_9ROSA (Replication factor A protein 1 OS=Morus notabilis GN=L484_007121 PE=4 SV=1)

HSP 1 Score: 970.7 bits (2508), Expect = 8.5e-280
Identity = 473/624 (75.80%), Postives = 553/624 (88.62%), Query Frame = 1

Query: 4   APTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGN-RYMFTASDGVMKLKAILPSNLT 63
           AP+   IS +++NPSPD+ +D+P++VVQ++DL   G+ RYMFTA+DG  KLKAILPS LT
Sbjct: 5   APSPDAISTIMANPSPDTTADMPEIVVQILDLTPKGSSRYMFTANDGKKKLKAILPSQLT 64

Query: 64  SDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAGTI 123
             VISG IQNLGLIRILDYSLNDIP+KSEKYLIVTKCE VSPALE E K+ VK+EE G +
Sbjct: 65  PQVISGEIQNLGLIRILDYSLNDIPSKSEKYLIVTKCETVSPALEMEFKSGVKSEETGIL 124

Query: 124 LKPKVELDDKSTF---NNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQP 183
           LKPK E++  S     ++G+GI+LKPKQE+V KSAAQI+HEQ  NM P ARM+MTRRV P
Sbjct: 125 LKPKQEIEINSEVKRESSGNGIMLKPKQEMVTKSAAQIIHEQHGNMVPPARMAMTRRVHP 184

Query: 184 LVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKF 243
           LV LNPY G W IKVRVT+KG +RTY+NA+GEGCVFNV LTDEDGTQIQATMFN+AARKF
Sbjct: 185 LVSLNPYQGSWMIKVRVTNKGTMRTYRNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 244

Query: 244 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVK 303
           Y+KF LGKVYY+S+GTLKVANK+FKTVQNDYEMTLN NS+V+E SNEAAFVPETK+NFV 
Sbjct: 245 YDKFQLGKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEASNEAAFVPETKFNFVP 304

Query: 304 IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWND 363
           I+MLGP+VNG++LVDVIGVVQ+VS TMSIRRK NNE  PKRD+TIADE+KKTVV+SLWND
Sbjct: 305 IEMLGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNENIPKRDITIADESKKTVVVSLWND 364

Query: 364 LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDS 423
           LAT VGQELLDIADQSP++A+K ++VGDFQG+SLS +SRS + +NPD  EA+ L+SWYDS
Sbjct: 365 LATNVGQELLDIADQSPVVAIKSVKVGDFQGLSLSALSRSMVVVNPDTPEANKLKSWYDS 424

Query: 424 EGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKP 483
           EGK   M+SV +G+SPST+SG RSMYSDR+ LSHI +N SLGE+KP FFSIR Y+S IKP
Sbjct: 425 EGKGSPMASVGTGMSPSTRSGGRSMYSDRVFLSHITDNPSLGEDKPAFFSIRGYISSIKP 484

Query: 484 DQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNE 543
           DQTMWYRACKTCNKKVTEAIGSGYWC+ CQKNDEECSLRYI+VVRVSDASGEA++S FNE
Sbjct: 485 DQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDEECSLRYILVVRVSDASGEAYISAFNE 544

Query: 544 EAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 603
           EAE I+GCSADELD+L+SQ+GEENSY++KLKEATWVPHLFR+SVSQNEYNNEKRQR+TVR
Sbjct: 545 EAESIIGCSADELDKLRSQLGEENSYEMKLKEATWVPHLFRISVSQNEYNNEKRQRLTVR 604

Query: 604 SVAPVDFAAESRFLLEEIAKMKAS 624
           +VAPVDFAAES+FLLEEI+KMKAS
Sbjct: 605 AVAPVDFAAESKFLLEEISKMKAS 628

BLAST of Csa1G013800 vs. TrEMBL
Match: K4BL07_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 951.4 bits (2458), Expect = 5.3e-274
Identity = 459/620 (74.03%), Postives = 546/620 (88.06%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           MA   +   IS +L+NPSPDS SD+P+++VQV+DLK TGNRYMF+A+DG MK+K IL S+
Sbjct: 1   MAKMVSPDAISTILANPSPDSSSDLPEIIVQVVDLKPTGNRYMFSANDGKMKIKGILQSS 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG 120
           L+S+VISG+IQNLGLIR++DY+LNDIP K+EKYLIVTKCE VSPALE E K EVK+E+ G
Sbjct: 61  LSSEVISGSIQNLGLIRVIDYTLNDIPTKNEKYLIVTKCEAVSPALEVEYKAEVKSEDTG 120

Query: 121 TILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL 180
            +LKP+ E          +GI+LKPKQE   KSAAQIVHEQ  NMAP ARM+MTRR+QPL
Sbjct: 121 IVLKPRQE---------ETGIVLKPKQEYQTKSAAQIVHEQSGNMAPTARMAMTRRIQPL 180

Query: 181 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 240
           V LNPY G+WTIKVRVT KGN+RTYKNA+GEGCVFNV LTDEDGTQIQATMFN+AA+KF+
Sbjct: 181 VSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAAKKFF 240

Query: 241 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI 300
           +KF LGKVYY+S+GTL+VANK+FKTVQNDYEMTLN NSQV+E SNE AF+PE K+NFV I
Sbjct: 241 DKFELGKVYYISKGTLRVANKQFKTVQNDYEMTLNENSQVEEASNEEAFIPEIKFNFVPI 300

Query: 301 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 360
           D LGP+VNGR+LVDVIGVVQ+VS TMSIRRK NNET PKRD+TIADETKKTVV+SLWNDL
Sbjct: 301 DELGPYVNGRELVDVIGVVQSVSPTMSIRRKSNNETVPKRDITIADETKKTVVVSLWNDL 360

Query: 361 ATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSE 420
           AT VGQELLD+AD+SP++A+K L+VGDFQG+SLS +S+S+I +NPD+ EA  LRSWYDSE
Sbjct: 361 ATHVGQELLDMADKSPVVAIKSLKVGDFQGLSLSALSKSNIVVNPDLPEAKKLRSWYDSE 420

Query: 421 GKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPD 480
           GK  S++S+ SG+SPSTKSG+RSMY+DR+SL HI  N SLGEEKP FFS++AY+SFIKPD
Sbjct: 421 GKETSLASIGSGMSPSTKSGARSMYTDRVSLLHITSNLSLGEEKPVFFSLKAYISFIKPD 480

Query: 481 QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 540
           QTMWYRACKTCNKKVTEA GSGYWC+ CQKND ECSLRYIM +RVSDASGEAW+STFN++
Sbjct: 481 QTMWYRACKTCNKKVTEAFGSGYWCEGCQKNDAECSLRYIMALRVSDASGEAWLSTFNDQ 540

Query: 541 AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS 600
           AE+I+GCSADELD+LKS+ G E +YQ+KLKEATWVPHLFRVSV+Q EYNNEKRQRITVR+
Sbjct: 541 AEKILGCSADELDKLKSEEG-ETAYQMKLKEATWVPHLFRVSVAQQEYNNEKRQRITVRA 600

Query: 601 VAPVDFAAESRFLLEEIAKM 621
           +APVD+ AES++LLEE++KM
Sbjct: 601 IAPVDYEAESKYLLEEMSKM 610

BLAST of Csa1G013800 vs. TrEMBL
Match: A0A059CZD8_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00599 PE=4 SV=1)

HSP 1 Score: 951.0 bits (2457), Expect = 7.0e-274
Identity = 470/647 (72.64%), Postives = 546/647 (84.39%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATG--NRYMFTASDGVMKLKAILP 60
           MA   T G IS + S PSPDS  DVPD+VVQV+DLK+TG  NR+MFTA+DG MKLK ILP
Sbjct: 1   MAKTVTPGAISIMRSTPSPDSSGDVPDIVVQVLDLKSTGSRNRFMFTANDGKMKLKGILP 60

Query: 61  SNLTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEV-------- 120
           SN+ S+++SG+IQNLGLIRIL Y+LNDIPNKS+KYL+V KCE VSPALE E+        
Sbjct: 61  SNVESEILSGSIQNLGLIRILHYTLNDIPNKSDKYLVVNKCEAVSPALEMEIGSDGGDLD 120

Query: 121 --------------KTEVKTEEAGTILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQ 180
                          ++ K EE+G +LKPK E++ ++    G+G++LKPKQE+VAKSAAQ
Sbjct: 121 SGIMLKKLKQENEANSDGKIEESGILLKPKQEVEVENQAKTGAGVLLKPKQEMVAKSAAQ 180

Query: 181 IVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFN 240
           IVHEQ  NMAPAAR++MTRRV PLV LNPY G WTIKVRVT KGN+RTY+NA+GEGCVFN
Sbjct: 181 IVHEQSRNMAPAARLAMTRRVHPLVSLNPYQGSWTIKVRVTSKGNMRTYRNARGEGCVFN 240

Query: 241 VVLTDEDGTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNV 300
           V LTDEDGTQIQATMFNDAARKFY+K  +GKVYY+SRG+LKVANK+FKTVQNDYEMTLN 
Sbjct: 241 VELTDEDGTQIQATMFNDAARKFYDKLEMGKVYYISRGSLKVANKQFKTVQNDYEMTLNE 300

Query: 301 NSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNET 360
           NS+V+E S+EA+FVPETK+NFV IDMLGPHVNG++L+DVIGVVQ+VS TMSIRRK NN+ 
Sbjct: 301 NSEVEEASSEASFVPETKFNFVPIDMLGPHVNGKELIDVIGVVQSVSPTMSIRRKSNNDI 360

Query: 361 APKRDVTIADETKKTVVISLWNDLATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTI 420
            PKRD+TIADETKKTVV+SLWNDLATTVGQELLD +DQSPI+A+K LRVGDFQGVSLSTI
Sbjct: 361 IPKRDITIADETKKTVVVSLWNDLATTVGQELLDSSDQSPIVAIKSLRVGDFQGVSLSTI 420

Query: 421 SRSSITINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILE 480
           SRS + +NP+  EA  LRSW+DSEGK  SM SV SG++ S+++GSRSMYSDR+ LSH   
Sbjct: 421 SRSVVKVNPETPEAEKLRSWFDSEGKGSSMDSVGSGITASSRNGSRSMYSDRVFLSHFTS 480

Query: 481 NKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECS 540
           N SLG++KP FFS+RAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWC+ CQKNDE CS
Sbjct: 481 NPSLGDDKPAFFSVRAYVSFIKPDQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDEGCS 540

Query: 541 LRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVP 600
           LRYIMV +VSD SGEAW+STFNEEAE I+GC ADEL+QL+SQ  EEN YQLKLK+ATWVP
Sbjct: 541 LRYIMVAKVSDPSGEAWLSTFNEEAEHIIGCPADELNQLRSQENEENPYQLKLKQATWVP 600

Query: 601 HLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIAKMKAS 624
           HLFRVSV+Q+EY  EKRQR+TVR +APVDFAAESRFLLEEI K KAS
Sbjct: 601 HLFRVSVAQHEYMGEKRQRLTVRGIAPVDFAAESRFLLEEITKEKAS 647

BLAST of Csa1G013800 vs. TrEMBL
Match: V4TQK0_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019317mg PE=4 SV=1)

HSP 1 Score: 949.1 bits (2452), Expect = 2.7e-273
Identity = 456/610 (74.75%), Postives = 537/610 (88.03%), Query Frame = 1

Query: 10  ISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSNLTSDVISGN 69
           IS +LSNPSPDS SD+P++VVQV+DLK TGNRYMF ASDG  +LKAILPSNL+S+VISGN
Sbjct: 10  ISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGN 69

Query: 70  IQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAGTILKPKVEL 129
           IQN GLIR+LDY+LN+IP KSEKYLIVTKCEVVSPALE E+K EVK++E+G I KPK E 
Sbjct: 70  IQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQED 129

Query: 130 DDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGD 189
           + K    +G GI+LKPKQE+VAKSAAQI+ +Q  NMAPAAR++MTRRV PLV LNPY G+
Sbjct: 130 EVKK---DGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGN 189

Query: 190 WTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFYEKFSLGKVY 249
           WTIKVRVT KGN+RTYKN +GEGCVFNV LTDEDGTQIQATMFN+AARKFY++F LGKVY
Sbjct: 190 WTIKVRVTSKGNMRTYKNVRGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 249

Query: 250 YVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNG 309
           Y+SRGTL+VANK+FKTVQNDYEM LN NS+V+E  NE AF+P+TK+NFV ID LG +VNG
Sbjct: 250 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 309

Query: 310 RDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELL 369
            +LVD+IGVVQNVS TMSIRRK NNE  PKRD+T+ADETK+TV +SLWN+LAT VGQELL
Sbjct: 310 TELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL 369

Query: 370 DIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSV 429
           D AD+SPI+A+K L+VGDFQG+SLST+ RS++ +NPD+ EA  L+SWY+SEGK  SM+S+
Sbjct: 370 DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVNPDLPEAKKLKSWYESEGKGTSMASI 429

Query: 430 SSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACK 489
            SGL    KSG+RSMYSDR+SL+HI  N SLG+EKP FFSI+AY+S IKPDQ MWYRACK
Sbjct: 430 GSGLGSLAKSGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACK 489

Query: 490 TCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSA 549
           TCNKKVT+A+GSGYWC+ CQKNDEECSLRYIMV RV D SGEAW+S FNEEAERI+GCSA
Sbjct: 490 TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 549

Query: 550 DELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAE 609
           DEL++LKSQ+G++NSYQ+KLKE TWVPHL RVSV+Q EYNNEKRQR+TVR+VAPVDFAAE
Sbjct: 550 DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 609

Query: 610 SRFLLEEIAK 620
           S+FLLEEI+K
Sbjct: 610 SKFLLEEISK 616

BLAST of Csa1G013800 vs. TrEMBL
Match: A0A067FQL9_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006973mg PE=4 SV=1)

HSP 1 Score: 947.6 bits (2448), Expect = 7.7e-273
Identity = 455/610 (74.59%), Postives = 538/610 (88.20%), Query Frame = 1

Query: 10  ISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSNLTSDVISGN 69
           IS +LSNPSPDS SD+P++VVQV+DLK TGNRYMF ASDG  +LKAILPSNL+S+VISGN
Sbjct: 10  ISTILSNPSPDSSSDIPEIVVQVLDLKLTGNRYMFNASDGKKRLKAILPSNLSSEVISGN 69

Query: 70  IQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAGTILKPKVEL 129
           IQN GLIR+LDY+LN+IP KSEKYLIVTKCEVVSPALE E+K EVK++E+G I KPK E 
Sbjct: 70  IQNKGLIRLLDYALNEIPTKSEKYLIVTKCEVVSPALEMEIKIEVKSDESGIIFKPKQED 129

Query: 130 DDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPLVYLNPYLGD 189
           + K    +G GI+LKPKQE+VAKSAAQI+ +Q  NMAPAAR++MTRRV PLV LNPY G+
Sbjct: 130 EVKK---DGPGIVLKPKQEMVAKSAAQILRDQNGNMAPAARLAMTRRVHPLVSLNPYQGN 189

Query: 190 WTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFYEKFSLGKVY 249
           WTIKVRVT KGN+RTYKNA+GEGCVFNV LTDEDGTQIQATMFN+AARKFY++F LGKVY
Sbjct: 190 WTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNEAARKFYDRFQLGKVY 249

Query: 250 YVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKIDMLGPHVNG 309
           Y+SRGTL+VANK+FKTVQNDYEM LN NS+V+E  NE AF+P+TK+NFV ID LG +VNG
Sbjct: 250 YISRGTLRVANKQFKTVQNDYEMNLNENSEVEEAVNETAFIPQTKFNFVPIDELGRYVNG 309

Query: 310 RDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDLATTVGQELL 369
            +LVD+IGVVQNVS TMSIRRK NNE  PKRD+T+ADETK+TV +SLWN+LAT VGQELL
Sbjct: 310 TELVDIIGVVQNVSPTMSIRRKSNNEMVPKRDITVADETKRTVTVSLWNELATNVGQELL 369

Query: 370 DIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSEGKAVSMSSV 429
           D AD+SPI+A+K L+VGDFQG+SLST+ RS++ ++PD+ EA  L+SWY+SEGK  SM+S+
Sbjct: 370 DNADKSPIVAIKSLKVGDFQGISLSTLGRSTVLVSPDLPEAKKLKSWYESEGKGTSMASI 429

Query: 430 SSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPDQTMWYRACK 489
            SGL    K+G+RSMYSDR+SL+HI  N SLG+EKP FFSI+AY+S IKPDQ MWYRACK
Sbjct: 430 GSGLGSLAKNGARSMYSDRVSLTHITSNPSLGDEKPVFFSIKAYISLIKPDQAMWYRACK 489

Query: 490 TCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSA 549
           TCNKKVT+A+GSGYWC+ CQKNDEECSLRYIMV RV D SGEAW+S FNEEAERI+GCSA
Sbjct: 490 TCNKKVTDALGSGYWCEGCQKNDEECSLRYIMVARVCDGSGEAWISIFNEEAERIIGCSA 549

Query: 550 DELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAE 609
           DEL++LKSQ+G++NSYQ+KLKE TWVPHL RVSV+Q EYNNEKRQR+TVR+VAPVDFAAE
Sbjct: 550 DELNELKSQLGDDNSYQMKLKEVTWVPHLLRVSVAQQEYNNEKRQRVTVRAVAPVDFAAE 609

Query: 610 SRFLLEEIAK 620
           S+FLLEEI+K
Sbjct: 610 SKFLLEEISK 616

BLAST of Csa1G013800 vs. TAIR10
Match: AT5G08020.1 (AT5G08020.1 RPA70-kDa subunit B)

HSP 1 Score: 863.2 bits (2229), Expect = 9.7e-251
Identity = 423/624 (67.79%), Postives = 513/624 (82.21%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           M ++ T  GI+ VL+N S DS S  P++VVQV+DLK  GNRY F+A+DG MK+KA+LP+ 
Sbjct: 1   MENSVTQDGIATVLANQSLDSSSVRPEIVVQVVDLKPAGNRYTFSANDGKMKIKAMLPAT 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSE-KYLIVTKCEVVSPALEKEVKTEVKTEEA 120
           LTSD+ISG IQNLGLIR+L+Y++NDIP KSE KY+++TKCE V+ AL+ E+K E+K    
Sbjct: 61  LTSDIISGKIQNLGLIRLLEYTVNDIPGKSEEKYMLITKCEAVASALDSEIKAEIKAS-- 120

Query: 121 GTILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQP 180
                              +GI+LKPK E VAKSA+QI++EQR N APAARM+MTRRV P
Sbjct: 121 -------------------TGIMLKPKHEFVAKSASQIINEQRGNAAPAARMAMTRRVHP 180

Query: 181 LVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKF 240
           LV LNPY G WTIKVRVT+KG +RTYKNA+GEGCVFNV LTDE+GTQIQATMFN AARKF
Sbjct: 181 LVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQIQATMFNAAARKF 240

Query: 241 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVK 300
           Y++F +GKVYY+SRG+LK+ANK+FKTVQNDYEMTLN NS+V+E SNE  F PETK+NFV 
Sbjct: 241 YDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNEEMFTPETKFNFVP 300

Query: 301 IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWND 360
           ID LG +VN +DL+DVIGVVQ+VS TMSIRRK +NE  PKRD+T+ADETKKTVV+SLWND
Sbjct: 301 IDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLADETKKTVVVSLWND 360

Query: 361 LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDS 420
           LAT +GQELLD+AD  P+IA+K L+VG FQGVSLSTISRS++ INP+  EA  L+SWYD+
Sbjct: 361 LATGIGQELLDMADNHPVIAIKSLKVGAFQGVSLSTISRSNVVINPNSPEATKLKSWYDA 420

Query: 421 EGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKP 480
           EGK  SMS++ SG+S S  +GSRSMYSDR+ LSHI  N SLGEEKP FFS RAY+SFIKP
Sbjct: 421 EGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEKPVFFSTRAYISFIKP 480

Query: 481 DQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNE 540
           DQTMWYRACKTCNKKVTEA+ SGYWC++CQK D+ECSLRYIM V+VSD++GE W+S FN+
Sbjct: 481 DQTMWYRACKTCNKKVTEAMDSGYWCESCQKKDQECSLRYIMAVKVSDSTGETWLSAFND 540

Query: 541 EAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 600
           EAE+I+GC+AD+L+ LKS+ GE N +Q KLKEATW  HLFR+SVSQ EYN+EKRQRITVR
Sbjct: 541 EAEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHLFRISVSQQEYNSEKRQRITVR 600

Query: 601 SVAPVDFAAESRFLLEEIAKMKAS 624
            V+P+DFAAE+R LL++I+K K S
Sbjct: 601 GVSPIDFAAETRLLLQDISKNKTS 603

BLAST of Csa1G013800 vs. TAIR10
Match: AT5G61000.1 (AT5G61000.1 Replication factor-A protein 1-related)

HSP 1 Score: 854.4 bits (2206), Expect = 4.5e-248
Identity = 417/622 (67.04%), Postives = 518/622 (83.28%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           M ++ T   IS VLSNPS DS SD  ++VVQV+DLK  GNRY F+A+DG  K+KA+  ++
Sbjct: 1   MQTSVTPDAISTVLSNPSFDSSSDRSEIVVQVVDLKPIGNRYTFSANDGKTKVKAMFTAS 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKT--EE 120
           LT ++ISG IQNLGLIR++D+++NDI +KS KY +VTKCE V   L+ E+  + K+  EE
Sbjct: 61  LTPEIISGKIQNLGLIRLIDFTVNDISSKSTKYFLVTKCEAVGSVLDSEINLDSKSGEEE 120

Query: 121 AGTILKPKVELDDKSTFNN--GSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRR 180
           A    K K+E    S  N+   +GI LKPKQE VAKSA+QI+ EQR N APAARM+MTRR
Sbjct: 121 AREPKKQKLEHSPVSPLNDVVSTGITLKPKQEFVAKSASQIMSEQRGNAAPAARMAMTRR 180

Query: 181 VQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAA 240
           V PLV LNPY G+WTIKVRVT+KG +R YKNA+GEGCVFNV LTDE+GTQIQATMFNDAA
Sbjct: 181 VHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNVELTDEEGTQIQATMFNDAA 240

Query: 241 RKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYN 300
           RKF+++F LGKVYY+SRG+LK+ANK+FKTVQNDYEMTLN NS+V+E S+E  F+PETK+N
Sbjct: 241 RKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASSEEMFIPETKFN 300

Query: 301 FVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISL 360
           FV I+ LG +VN ++L+D+IGVVQ+VS TMSIRR+ +NE  PKRD+T+ADE++KTVV+SL
Sbjct: 301 FVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMIPKRDITLADESRKTVVVSL 360

Query: 361 WNDLATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSW 420
           WNDLAT +GQELLD+ADQSP+IA+K L+VGDFQGVSLSTISRS++ INP+  EA  L+SW
Sbjct: 361 WNDLATGIGQELLDMADQSPVIAIKSLKVGDFQGVSLSTISRSNVVINPESPEAKKLKSW 420

Query: 421 YDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSF 480
           +DSEGK +SMSS+ SG+SPS K+GSRS+Y+DR+ LSHI  N SL EEKP FFS RAY+SF
Sbjct: 421 FDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHITSNPSLFEEKPVFFSTRAYISF 480

Query: 481 IKPDQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVST 540
           IKPDQTMWY+ACKTCNKKVTEA+ SGYWC+ CQ+  EECSLRYIM V+V+D+SGE W+S+
Sbjct: 481 IKPDQTMWYQACKTCNKKVTEALDSGYWCEGCQRKYEECSLRYIMAVKVTDSSGETWISS 540

Query: 541 FNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRI 600
           FN+EAE+I+GCSADEL++LKS+ GE N YQ KLKEATW  H+FRVSV+QNEYN EKRQR+
Sbjct: 541 FNDEAEKILGCSADELNKLKSEEGEVNEYQTKLKEATWSSHVFRVSVTQNEYNGEKRQRV 600

Query: 601 TVRSVAPVDFAAESRFLLEEIA 619
           TV+ VAP+DFAAE+R LL++I+
Sbjct: 601 TVKGVAPLDFAAETRLLLQDIS 622

BLAST of Csa1G013800 vs. TAIR10
Match: AT2G06510.1 (AT2G06510.1 replication protein A 1A)

HSP 1 Score: 322.0 bits (824), Expect = 8.0e-88
Identity = 195/627 (31.10%), Postives = 330/627 (52.63%), Query Frame = 1

Query: 29  VVQVIDLKATGN-------RYMFTASDGVMKLKAILPSNLTSDVISGNIQNLGLIRILDY 88
           ++QV+++K  G        RY F  SDGV    A++   L   V SG  +   +++++DY
Sbjct: 23  LLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMVAVQLNDRVKSGQFEKGSIVQLIDY 82

Query: 89  SLNDIPNKSEKYLIVTKCEVV--------SPALEKEVKTEVKTEEAGT----------IL 148
             +D+  K  K ++V   E +        +P +  E  TE +   +GT            
Sbjct: 83  ICSDV--KGRKLIVVLNMETIVQQSETIGNPTIFGETDTEAQKTFSGTGNIPPPNRVVFN 142

Query: 149 KPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHE---QRMNMAPAARMSMTRRVQPL 208
           +P V+         G  I  +       + + Q  ++      N  P  +     RV P+
Sbjct: 143 EPMVQHSVNRAPPRGVNIQNQANNTPSFRPSVQPSYQPPASYRNHGPIMKNEAPARVIPI 202

Query: 209 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 268
             LNPY G W IK RVT KG++R Y NA+G+G VF+  L D DG +I+ T FN    +FY
Sbjct: 203 AALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALVDRFY 262

Query: 269 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI 328
           +   +GKVY +S+G+LK A K F  ++N++E+ L   S V+   +E   +P+ +++F  I
Sbjct: 263 DVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFSFRPI 322

Query: 329 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 388
             +  +     ++DVIGVV +V+ ++ I RK   ET  +R + + DE+ K V ++LW + 
Sbjct: 323 SDI-ENAENNTILDVIGVVTSVNPSVPILRKNGMET-HRRILNLKDESGKAVEVTLWGEF 382

Query: 389 ATTVGQELLDIADQS--PIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYD 448
               G++L ++ D +  P++A+K  +V DF G S+ TIS + + INPD  EAH LR+W+D
Sbjct: 383 CNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTWFD 442

Query: 449 SEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIK 508
             GK     + S  +S  T  G  S    R ++S I E      +KP + +++A +SFIK
Sbjct: 443 YGGK----DTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIK 502

Query: 509 PDQTMWYRAC------KTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEA 568
            D +  Y AC      K CNKKVT +  + + CD C +  +EC  RY++ V++ D +G  
Sbjct: 503 TD-SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLT 562

Query: 569 WVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEK 620
           W++ F E  E IMGC A +L  +K ++ +E  +   +++  +  ++ ++ + +  Y +E+
Sbjct: 563 WITAFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQ 622

BLAST of Csa1G013800 vs. TAIR10
Match: AT5G45400.1 (AT5G45400.1 Replication factor-A protein 1-related)

HSP 1 Score: 291.2 bits (744), Expect = 1.5e-78
Identity = 160/468 (34.19%), Postives = 260/468 (55.56%), Query Frame = 1

Query: 163 MNMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDE 222
           +N  P AR     R+ P+  LNPY G WTIKVRVT K +LR + N +GEG +F+  L D 
Sbjct: 285 VNRGPVARNEAPPRINPIAALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDA 344

Query: 223 DGTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDE 282
           DG +I+ T FNDA  +F++K  +G VY +SRG LK A K F  + NDYE+ L+  S +  
Sbjct: 345 DGGEIRVTCFNDAVDQFFDKIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQP 404

Query: 283 VSNEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDV 342
             ++   +P   ++F  I  +  ++      DVIG+V ++S T++I RK N     KR +
Sbjct: 405 CEDDGT-IPRYHFHFRNIGDI-ENMENNSTTDVIGIVSSISPTVAIMRK-NLTEVQKRSL 464

Query: 343 TIADETKKTVVISLWNDLATTVGQELLDIADQS--PIIALKYLRVGDFQGVSLSTISRSS 402
            + D + ++V +++W +     GQ+L ++ D    P++ALK  R+G+F G  +STI  S 
Sbjct: 465 QLKDMSGRSVEVTMWGNFCNAEGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQ 524

Query: 403 ITINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSL 462
             I PD  EA +LR WY+ EG+    +S+S   S   +   R +      ++ I + K  
Sbjct: 525 FFIEPDFPEARELRQWYEREGRNAHFTSISREFSGVGRQEVRKV------IAQIKDEKLG 584

Query: 463 GEEKPTFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYW-CDNCQKNDE 522
             EKP + ++ A +SF+K  +   Y AC      + C+KKVT   G G W C+ C K  +
Sbjct: 585 TSEKPDWITVCATISFMKV-ENFCYTACPIMNGDRPCSKKVTNN-GDGTWRCEKCDKCVD 644

Query: 523 ECSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEAT 582
           EC  RYI+ +++ D +   W + F E  E IMG SA +L  +K +  +E  ++  ++   
Sbjct: 645 ECDYRYILQIQLQDHTDLTWATAFQEAGEEIMGMSAKDLYYVKYENQDEEKFEDIIRSVA 704

Query: 583 WVPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIAKMK 622
           +  ++F++ + +  Y++E+R + TV     +++++ +RF+LE I K+K
Sbjct: 705 FTKYIFKLKIKEETYSDEQRVKATVVKAEKLNYSSNTRFMLEAIDKLK 741

BLAST of Csa1G013800 vs. TAIR10
Match: AT4G19130.1 (AT4G19130.1 Replication factor-A protein 1-related)

HSP 1 Score: 285.0 bits (728), Expect = 1.1e-76
Identity = 159/467 (34.05%), Postives = 267/467 (57.17%), Query Frame = 1

Query: 164 NMAPAARMSMTRRVQPLVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDED 223
           N  P AR     ++ P+  L+PY G WTIK RVT+K  L+ Y N +GEG VFN  L D D
Sbjct: 215 NRGPVARNEAPPKIIPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDAD 274

Query: 224 GTQIQATMFNDAARKFYEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEV 283
           G +I+ T FN  A +FY++  +G +Y +SRG+L+ A K F  ++NDYE+ L+  S + + 
Sbjct: 275 GGEIRVTCFNAVADQFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQC 334

Query: 284 SNEAAFVPETKYNFVKIDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVT 343
             E A +P  +++F  I  +   +    +VDVIG+V ++S T++I RK N    PKR + 
Sbjct: 335 YEEDAAIPRHQFHFRTIGDI-ESMENNCIVDVIGIVSSISPTVTITRK-NGTATPKRSLQ 394

Query: 344 IADETKKTVVISLWNDLATTVGQELLDIADQS--PIIALKYLRVGDFQGVSLSTISRSSI 403
           + D + ++V +++W D     GQ L  + D    P++A+K  R+ +F G ++STI  S +
Sbjct: 395 LKDMSGRSVEVTMWGDFCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQL 454

Query: 404 TINPDIKEAHDLRSWYDSEGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLG 463
            I+PD  EA  L++W++ EGK+V   S+S   S S K   R       ++S I + K   
Sbjct: 455 FIDPDFVEAEKLKNWFEREGKSVPCISLSREFSGSGKVDVRK------TISQIKDEKLGT 514

Query: 464 EEKPTFFSIRAYVSFIKPDQTMWYRAC------KTCNKKVTEAIGSGYW-CDNCQKNDEE 523
            EKP + ++ A + ++K D    Y AC      + C+KKVT+  G G W C+ C K+ +E
Sbjct: 515 SEKPDWITVSATILYLKFD-NFCYTACPIMNGDRPCSKKVTDN-GDGTWRCEKCDKSVDE 574

Query: 524 CSLRYIMVVRVSDASGEAWVSTFNEEAERIMGCSADELDQLKSQIGEENSYQLKLKEATW 583
           C  RYI+ +++ D +    V+ F E  E IMG SA +L  +K++  +E  ++  +++  +
Sbjct: 575 CDYRYILQLQIQDHTDLTCVTAFQEAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAF 634

Query: 584 VPHLFRVSVSQNEYNNEKRQRITVRSVAPVDFAAESRFLLEEIAKMK 622
             + F++ V +  +++E+R + TV  V  ++++A++R +L  + K++
Sbjct: 635 TKYNFKLKVKEETFSDEQRVKATVVKVDKLNYSADTRTMLGAMDKLR 671

BLAST of Csa1G013800 vs. NCBI nr
Match: gi|778656104|ref|XP_011648462.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Cucumis sativus])

HSP 1 Score: 1224.5 bits (3167), Expect = 0.0e+00
Identity = 623/623 (100.00%), Postives = 623/623 (100.00%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN
Sbjct: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG 120
           LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG
Sbjct: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG 120

Query: 121 TILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL 180
           TILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL
Sbjct: 121 TILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL 180

Query: 181 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 240
           VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY
Sbjct: 181 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 240

Query: 241 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI 300
           EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI
Sbjct: 241 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI 300

Query: 301 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 360
           DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL
Sbjct: 301 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 360

Query: 361 ATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSE 420
           ATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSE
Sbjct: 361 ATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSE 420

Query: 421 GKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPD 480
           GKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPD
Sbjct: 421 GKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPD 480

Query: 481 QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 540
           QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE
Sbjct: 481 QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 540

Query: 541 AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS 600
           AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS
Sbjct: 541 AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS 600

Query: 601 VAPVDFAAESRFLLEEIAKMKAS 624
           VAPVDFAAESRFLLEEIAKMKAS
Sbjct: 601 VAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Csa1G013800 vs. NCBI nr
Match: gi|659106211|ref|XP_008453278.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit B [Cucumis melo])

HSP 1 Score: 1191.8 bits (3082), Expect = 0.0e+00
Identity = 602/623 (96.63%), Postives = 614/623 (98.56%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           MASAPTAGGISK+LSNPSPDSP+DVPDVVVQVIDLKATGNRYMFTASDG MKLKAILPSN
Sbjct: 1   MASAPTAGGISKILSNPSPDSPTDVPDVVVQVIDLKATGNRYMFTASDGDMKLKAILPSN 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG 120
           LTSDVISGNIQNLGLIRILDYSLNDIPNKS+KYLIV KC VVSPALEKEVKTEVK EEAG
Sbjct: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSDKYLIVAKCVVVSPALEKEVKTEVKKEEAG 120

Query: 121 TILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL 180
            +LKPKVELDDKS FNNGSGI+LKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL
Sbjct: 121 IVLKPKVELDDKSKFNNGSGILLKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL 180

Query: 181 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 240
           VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY
Sbjct: 181 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 240

Query: 241 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI 300
           EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVS+EAAFVPETKYNFVKI
Sbjct: 241 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSSEAAFVPETKYNFVKI 300

Query: 301 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 360
           DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL
Sbjct: 301 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 360

Query: 361 ATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSE 420
           ATTVGQELLDIADQSPIIA+KYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYD+E
Sbjct: 361 ATTVGQELLDIADQSPIIAVKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDAE 420

Query: 421 GKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPD 480
           GKAVSMSSVSSG+SPSTKSGSRSMYSDR+SLSHI +NKSLGEEKP FFSIRAYVSFIKPD
Sbjct: 421 GKAVSMSSVSSGMSPSTKSGSRSMYSDRVSLSHINQNKSLGEEKPMFFSIRAYVSFIKPD 480

Query: 481 QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 540
           QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGE WVSTFNEE
Sbjct: 481 QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEVWVSTFNEE 540

Query: 541 AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS 600
           AERI+GCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS
Sbjct: 541 AERIIGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS 600

Query: 601 VAPVDFAAESRFLLEEIAKMKAS 624
           VAPVDFAAESRFLLEEIAKMKAS
Sbjct: 601 VAPVDFAAESRFLLEEIAKMKAS 623

BLAST of Csa1G013800 vs. NCBI nr
Match: gi|703133913|ref|XP_010105503.1| (Replication factor A protein 1 [Morus notabilis])

HSP 1 Score: 970.7 bits (2508), Expect = 1.2e-279
Identity = 473/624 (75.80%), Postives = 553/624 (88.62%), Query Frame = 1

Query: 4   APTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGN-RYMFTASDGVMKLKAILPSNLT 63
           AP+   IS +++NPSPD+ +D+P++VVQ++DL   G+ RYMFTA+DG  KLKAILPS LT
Sbjct: 5   APSPDAISTIMANPSPDTTADMPEIVVQILDLTPKGSSRYMFTANDGKKKLKAILPSQLT 64

Query: 64  SDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAGTI 123
             VISG IQNLGLIRILDYSLNDIP+KSEKYLIVTKCE VSPALE E K+ VK+EE G +
Sbjct: 65  PQVISGEIQNLGLIRILDYSLNDIPSKSEKYLIVTKCETVSPALEMEFKSGVKSEETGIL 124

Query: 124 LKPKVELDDKSTF---NNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQP 183
           LKPK E++  S     ++G+GI+LKPKQE+V KSAAQI+HEQ  NM P ARM+MTRRV P
Sbjct: 125 LKPKQEIEINSEVKRESSGNGIMLKPKQEMVTKSAAQIIHEQHGNMVPPARMAMTRRVHP 184

Query: 184 LVYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKF 243
           LV LNPY G W IKVRVT+KG +RTY+NA+GEGCVFNV LTDEDGTQIQATMFN+AARKF
Sbjct: 185 LVSLNPYQGSWMIKVRVTNKGTMRTYRNARGEGCVFNVELTDEDGTQIQATMFNEAARKF 244

Query: 244 YEKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVK 303
           Y+KF LGKVYY+S+GTLKVANK+FKTVQNDYEMTLN NS+V+E SNEAAFVPETK+NFV 
Sbjct: 245 YDKFQLGKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEASNEAAFVPETKFNFVP 304

Query: 304 IDMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWND 363
           I+MLGP+VNG++LVDVIGVVQ+VS TMSIRRK NNE  PKRD+TIADE+KKTVV+SLWND
Sbjct: 305 IEMLGPYVNGKELVDVIGVVQSVSPTMSIRRKSNNENIPKRDITIADESKKTVVVSLWND 364

Query: 364 LATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDS 423
           LAT VGQELLDIADQSP++A+K ++VGDFQG+SLS +SRS + +NPD  EA+ L+SWYDS
Sbjct: 365 LATNVGQELLDIADQSPVVAIKSVKVGDFQGLSLSALSRSMVVVNPDTPEANKLKSWYDS 424

Query: 424 EGKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKP 483
           EGK   M+SV +G+SPST+SG RSMYSDR+ LSHI +N SLGE+KP FFSIR Y+S IKP
Sbjct: 425 EGKGSPMASVGTGMSPSTRSGGRSMYSDRVFLSHITDNPSLGEDKPAFFSIRGYISSIKP 484

Query: 484 DQTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNE 543
           DQTMWYRACKTCNKKVTEAIGSGYWC+ CQKNDEECSLRYI+VVRVSDASGEA++S FNE
Sbjct: 485 DQTMWYRACKTCNKKVTEAIGSGYWCEGCQKNDEECSLRYILVVRVSDASGEAYISAFNE 544

Query: 544 EAERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVR 603
           EAE I+GCSADELD+L+SQ+GEENSY++KLKEATWVPHLFR+SVSQNEYNNEKRQR+TVR
Sbjct: 545 EAESIIGCSADELDKLRSQLGEENSYEMKLKEATWVPHLFRISVSQNEYNNEKRQRLTVR 604

Query: 604 SVAPVDFAAESRFLLEEIAKMKAS 624
           +VAPVDFAAES+FLLEEI+KMKAS
Sbjct: 605 AVAPVDFAAESKFLLEEISKMKAS 628

BLAST of Csa1G013800 vs. NCBI nr
Match: gi|1021471716|ref|XP_016193495.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit B isoform X1 [Arachis ipaensis])

HSP 1 Score: 954.5 bits (2466), Expect = 9.1e-275
Identity = 468/623 (75.12%), Postives = 548/623 (87.96%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           MA + +   IS +L+NP+PDS SD+P++VVQV+DLK +GNRYMF+ASDG +KL+AILPS+
Sbjct: 1   MAKSVSPDAISTLLANPTPDSSSDLPEIVVQVLDLKQSGNRYMFSASDGKLKLRAILPSS 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG 120
             SDV+SG IQNLGLIRILDY+LNDIPNKSEKYLIVTKCE VSPALE E+K+EVK E  G
Sbjct: 61  QYSDVLSGKIQNLGLIRILDYTLNDIPNKSEKYLIVTKCEPVSPALESEIKSEVKNEGGG 120

Query: 121 TILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL 180
            +LKPK +    S      GI+LKPKQE+V+KSAAQIVHEQ  N+APAARM+MTRRV+PL
Sbjct: 121 IVLKPKQD----SAVKIEGGIVLKPKQEVVSKSAAQIVHEQHRNVAPAARMAMTRRVRPL 180

Query: 181 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 240
           V LNPY G+WTIKV VT KGN+RTYKNA+GEGCVFNV LTDEDGTQIQATMFNDAARKFY
Sbjct: 181 VSLNPYQGNWTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNDAARKFY 240

Query: 241 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI 300
           +KF LGKVYY+S+GTLKVANK+FKTVQNDYEMTLN NS+V+E +NEA+FVPETK++FV I
Sbjct: 241 DKFVLGKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEAANEASFVPETKFSFVPI 300

Query: 301 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 360
           D LGP+VN  +LVDV+GVVQNVS TMSIRRK NNET PKRD+TIADETKKTVV+SLWNDL
Sbjct: 301 DQLGPYVNKSELVDVVGVVQNVSPTMSIRRKSNNETIPKRDITIADETKKTVVVSLWNDL 360

Query: 361 ATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSE 420
           AT +GQELLD+AD+SP++A+K LRVGDFQGVSLS IS+S I I+P+I EA  LR WYDSE
Sbjct: 361 ATNIGQELLDMADKSPVVAIKSLRVGDFQGVSLSAISKSVIKIDPEIPEAKKLRCWYDSE 420

Query: 421 GKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPD 480
           GK  +M+SV SG SPS+ +GSRS+YSDR+SLS+I  N SLGE+KP FFS+R Y+SFIKPD
Sbjct: 421 GKDATMASVGSGSSPSSMNGSRSVYSDRVSLSYITSNLSLGEDKPAFFSLRGYISFIKPD 480

Query: 481 QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 540
           Q MWYRACKTCNKKVTE+IG+GYWC+ CQKNDE+CSLRYIMVV+V+D SGEA+VS FNEE
Sbjct: 481 QAMWYRACKTCNKKVTESIGAGYWCEGCQKNDEQCSLRYIMVVKVADESGEAYVSVFNEE 540

Query: 541 AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS 600
           AE+I+GCSADELD LKSQ GE+N +QLKLK+ATWVPHLFRVSVSQNEYNNEKRQRIT ++
Sbjct: 541 AEKIVGCSADELDTLKSQEGEDNPFQLKLKQATWVPHLFRVSVSQNEYNNEKRQRITAKT 600

Query: 601 VAPVDFAAESRFLLEEIAKMKAS 624
           V PVDFAAESR LLE+I+KM+AS
Sbjct: 601 VVPVDFAAESRLLLEDISKMRAS 619

BLAST of Csa1G013800 vs. NCBI nr
Match: gi|1012006072|ref|XP_015943436.1| (PREDICTED: replication protein A 70 kDa DNA-binding subunit B isoform X1 [Arachis duranensis])

HSP 1 Score: 952.6 bits (2461), Expect = 3.4e-274
Identity = 467/623 (74.96%), Postives = 549/623 (88.12%), Query Frame = 1

Query: 1   MASAPTAGGISKVLSNPSPDSPSDVPDVVVQVIDLKATGNRYMFTASDGVMKLKAILPSN 60
           MA + +   IS +L+NP+PDS SD+P++VVQV+DLK +GNRYMF+ASDG +KL+AILPS+
Sbjct: 1   MAKSVSPDAISTLLANPTPDSSSDLPEIVVQVLDLKQSGNRYMFSASDGKLKLRAILPSS 60

Query: 61  LTSDVISGNIQNLGLIRILDYSLNDIPNKSEKYLIVTKCEVVSPALEKEVKTEVKTEEAG 120
             SDV+SG IQNLGLIRILDY+LNDIPNKSEKYLIVTKCE VSPALE E+++EVK E  G
Sbjct: 61  QYSDVLSGKIQNLGLIRILDYTLNDIPNKSEKYLIVTKCEPVSPALESEIRSEVKNEGGG 120

Query: 121 TILKPKVELDDKSTFNNGSGIILKPKQELVAKSAAQIVHEQRMNMAPAARMSMTRRVQPL 180
            +LKPK +    S      GI+LKPKQE+V+KSAAQIVHEQ+ N+APAARM+MTRRV+PL
Sbjct: 121 IVLKPKQD----SAVKIEGGIVLKPKQEVVSKSAAQIVHEQQRNVAPAARMAMTRRVRPL 180

Query: 181 VYLNPYLGDWTIKVRVTDKGNLRTYKNAQGEGCVFNVVLTDEDGTQIQATMFNDAARKFY 240
           V LNPY G+WTIKV VT KGN+RTYKNA+GEGCVFNV LTDEDGTQIQATMFNDAARKFY
Sbjct: 181 VSLNPYQGNWTIKVSVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQATMFNDAARKFY 240

Query: 241 EKFSLGKVYYVSRGTLKVANKKFKTVQNDYEMTLNVNSQVDEVSNEAAFVPETKYNFVKI 300
           +KF LGKVYY+S+GTLKVANK+FKTVQNDYEMTLN NS+V+E +NEA+FVPETK++FV I
Sbjct: 241 DKFVLGKVYYISKGTLKVANKQFKTVQNDYEMTLNENSEVEEAANEASFVPETKFSFVPI 300

Query: 301 DMLGPHVNGRDLVDVIGVVQNVSSTMSIRRKINNETAPKRDVTIADETKKTVVISLWNDL 360
           D LGP+VN  +LVDV+GVVQNVS TMSIRRK NNE+ PKRD+TIADETKKTVV+SLWNDL
Sbjct: 301 DQLGPYVNKSELVDVVGVVQNVSPTMSIRRKSNNESIPKRDITIADETKKTVVVSLWNDL 360

Query: 361 ATTVGQELLDIADQSPIIALKYLRVGDFQGVSLSTISRSSITINPDIKEAHDLRSWYDSE 420
           AT +GQELLD+AD+SP++A+K LRVGDFQGVSLS IS+S I I+P+I EA  LR WYDSE
Sbjct: 361 ATNIGQELLDMADKSPVVAIKSLRVGDFQGVSLSAISKSVIKIDPEIPEAKKLRCWYDSE 420

Query: 421 GKAVSMSSVSSGLSPSTKSGSRSMYSDRISLSHILENKSLGEEKPTFFSIRAYVSFIKPD 480
           GK  +M+SV SG SPS+ +GSRS+YSDR+SLS+I  N SLGE+KP FFS+R Y+SFIKPD
Sbjct: 421 GKDATMASVGSGSSPSSMNGSRSVYSDRVSLSYITSNLSLGEDKPAFFSLRGYISFIKPD 480

Query: 481 QTMWYRACKTCNKKVTEAIGSGYWCDNCQKNDEECSLRYIMVVRVSDASGEAWVSTFNEE 540
           Q MWYRACKTCNKKVTE+IG+GYWC+ CQKNDE+CSLRYIMVV+V+D SGEA+VS FNEE
Sbjct: 481 QAMWYRACKTCNKKVTESIGAGYWCEGCQKNDEQCSLRYIMVVKVADESGEAYVSVFNEE 540

Query: 541 AERIMGCSADELDQLKSQIGEENSYQLKLKEATWVPHLFRVSVSQNEYNNEKRQRITVRS 600
           AE+I+GCSADELD LKSQ GE+N +QLKLK+ATWVPHLFRVSVSQNEYNNEKRQRIT R+
Sbjct: 541 AEKIVGCSADELDILKSQEGEDNPFQLKLKQATWVPHLFRVSVSQNEYNNEKRQRITART 600

Query: 601 VAPVDFAAESRFLLEEIAKMKAS 624
           V PVDFAAESR LLE+I+KM+AS
Sbjct: 601 VVPVDFAAESRLLLEDISKMRAS 619

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
RFA1B_ARATH1.7e-24967.79Replication protein A 70 kDa DNA-binding subunit B OS=Arabidopsis thaliana GN=RP... [more]
RFA1D_ARATH8.0e-24767.04Replication protein A 70 kDa DNA-binding subunit D OS=Arabidopsis thaliana GN=RP... [more]
RFA1B_ORYSJ7.0e-23564.86Replication protein A 70 kDa DNA-binding subunit B OS=Oryza sativa subsp. japoni... [more]
RFA1A_ARATH1.4e-8631.10Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana GN=RP... [more]
RFA1A_ORYSJ4.9e-7929.87Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japoni... [more]
Match NameE-valueIdentityDescription
W9SG43_9ROSA8.5e-28075.80Replication factor A protein 1 OS=Morus notabilis GN=L484_007121 PE=4 SV=1[more]
K4BL07_SOLLC5.3e-27474.03Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
A0A059CZD8_EUCGR7.0e-27472.64Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B00599 PE=4 SV=1[more]
V4TQK0_9ROSI2.7e-27374.75Uncharacterized protein OS=Citrus clementina GN=CICLE_v10019317mg PE=4 SV=1[more]
A0A067FQL9_CITSI7.7e-27374.59Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006973mg PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G08020.19.7e-25167.79 RPA70-kDa subunit B[more]
AT5G61000.14.5e-24867.04 Replication factor-A protein 1-related[more]
AT2G06510.18.0e-8831.10 replication protein A 1A[more]
AT5G45400.11.5e-7834.19 Replication factor-A protein 1-related[more]
AT4G19130.11.1e-7634.05 Replication factor-A protein 1-related[more]
Match NameE-valueIdentityDescription
gi|778656104|ref|XP_011648462.1|0.0e+00100.00PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Cucumis sati... [more]
gi|659106211|ref|XP_008453278.1|0.0e+0096.63PREDICTED: replication protein A 70 kDa DNA-binding subunit B [Cucumis melo][more]
gi|703133913|ref|XP_010105503.1|1.2e-27975.80Replication factor A protein 1 [Morus notabilis][more]
gi|1021471716|ref|XP_016193495.1|9.1e-27575.12PREDICTED: replication protein A 70 kDa DNA-binding subunit B isoform X1 [Arachi... [more]
gi|1012006072|ref|XP_015943436.1|3.4e-27474.96PREDICTED: replication protein A 70 kDa DNA-binding subunit B isoform X1 [Arachi... [more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004365NA-bd_OB_tRNA
IPR004591Rfa1
IPR007199Rep_factor-A_N
IPR012340NA-bd_OB-fold
IPR013955Rep_factor-A_C
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0003677DNA binding
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
GO:0006281DNA repair
GO:0006310DNA recombination
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006310 DNA recombination
biological_process GO:0006281 DNA repair
biological_process GO:0006260 DNA replication
cellular_component GO:0005634 nucleus
cellular_component GO:0005662 DNA replication factor A complex
molecular_function GO:0003677 DNA binding
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0046872 metal ion binding
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU088128cucumber EST collection version 3.0transcribed_cluster
CU122747cucumber EST collection version 3.0transcribed_cluster
CU146262cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G013800.1Csa1G013800.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU146262CU146262transcribed_cluster
CU088128CU088128transcribed_cluster
CU122747CU122747transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004365OB-fold nucleic acid binding domain, AA-tRNA synthetase-typePFAMPF01336tRNA_anti-codoncoord: 190..274
score: 4.2
IPR004591Replication factor A protein 1TIGRFAMsTIGR00617TIGR00617coord: 6..619
score: 2.0E
IPR007199Replication factor-A protein 1, N-terminalPFAMPF04057Rep-A_Ncoord: 6..103
score: 5.9
IPR012340Nucleic acid-binding, OB-foldGENE3DG3DSA:2.40.50.140coord: 6..107
score: 1.3E-9coord: 179..281
score: 5.5E-30coord: 479..620
score: 4.9E-44coord: 294..422
score: 6.0
IPR012340Nucleic acid-binding, OB-foldunknownSSF50249Nucleic acid-binding proteinscoord: 181..286
score: 4.86E-27coord: 4..107
score: 3.26E-8coord: 295..424
score: 1.47E-29coord: 446..620
score: 4.11
IPR013955Replication factor A, C-terminalPFAMPF08646Rep_fac-A_Ccoord: 467..613
score: 4.3
NoneNo IPR availableunknownCoilCoilcoord: 538..558
scor
NoneNo IPR availablePANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 30..623
score: 4.1E
NoneNo IPR availablePANTHERPTHR23273:SF4REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNITcoord: 30..623
score: 4.1E

The following gene(s) are paralogous to this gene:

None