Csa1G009620 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAAATTCTTCCATTGATCTTTCTCTTAGTTGTTGCAACCATTGGGTTTAGTAATGGACATGAAGTGGGGATTTACGAATTGAAAAGAGGGGATTTTTCTATTCAGCTAACTAATTATGGTGCTACCATTCTCTCTCTGATCCTCTCGGATAAAAATGGTTCGTTTCTGTTTTTGTTTTTGCGTTAAACAAAACATTATGATCCAGTGTTCTAACAATTCTCTTAGTTGTTTGTTTTAGGGAAATTGGATGATGTTATTCTTTCTTTCCCTTCAGTTGACGACTTTCGAGTGAGATGATCTTTATGATTTTTGTTTGTTTGTTTGTATATATTTGTTTTGGCAGAATGATATACTACCTATTTTGGTAACATTGTTGGACGTGTAGCAAATAGAATTGGAGGAGCTCAATTTGGTATCAATGGTGTTTTCCACAAACTCGAGGAGCTCATGTTTATCTCAAAGTGGCTCGACGTTGAAGATTAATCCAATTGTGTCTCTTAGCTCATGTTTATCTCAAAGTGGCTCGACGTTGAACATTAATCCAATTGTATCTCGTTTGTGTTTGGATTTGAGTTATGGGTACCATTATTGTGCAATGAATAGTTGTATTATAATTGATTGA ATGGCCAAAATTCTTCCATTGATCTTTCTCTTAGTTGTTGCAACCATTGGGTTTAGTAATGGACATGAAGTGGGGATTTACGAATTGAAAAGAGGGGATTTTTCTATTCAGCTAACTAATTATGGTGCTACCATTCTCTCTCTGATCCTCTCGGATAAAAATGGGAAATTGGATGATGTTATTCTTTCTTTCCCTTCAGTTGACGACTTTCGACAAATAGAATTGGAGGAGCTCAATTTGGTATCAATGGTGTTTTCCACAAACTCGAGGAGCTCATGTTTATCTCAAAGTGGCTCGACGTTGAAGATTAATCCAATTGTGTCTCTTAGCTCATGTTTATCTCAAAGTGGCTCGACGTTGAACATTAATCCAATTGTATCTCGTTTGTGTTTGGATTTGAGTTATGGGTACCATTATTGTGCAATGAATAGTTGTATTATAATTGATTGA ATGGCCAAAATTCTTCCATTGATCTTTCTCTTAGTTGTTGCAACCATTGGGTTTAGTAATGGACATGAAGTGGGGATTTACGAATTGAAAAGAGGGGATTTTTCTATTCAGCTAACTAATTATGGTGCTACCATTCTCTCTCTGATCCTCTCGGATAAAAATGGGAAATTGGATGATGTTATTCTTTCTTTCCCTTCAGTTGACGACTTTCGACAAATAGAATTGGAGGAGCTCAATTTGGTATCAATGGTGTTTTCCACAAACTCGAGGAGCTCATGTTTATCTCAAAGTGGCTCGACGTTGAAGATTAATCCAATTGTGTCTCTTAGCTCATGTTTATCTCAAAGTGGCTCGACGTTGAACATTAATCCAATTGTATCTCGTTTGTGTTTGGATTTGAGTTATGGGTACCATTATTGTGCAATGAATAGTTGTATTATAATTGATTGA MAKILPLIFLLVVATIGFSNGHEVGIYELKRGDFSIQLTNYGATILSLILSDKNGKLDDVILSFPSVDDFRQIELEELNLVSMVFSTNSRSSCLSQSGSTLKINPIVSLSSCLSQSGSTLNINPIVSRLCLDLSYGYHYCAMNSCIIID*
BLAST of Csa1G009620 vs. TrEMBL
Match: A0A0A0LPC7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G009620 PE=4 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 3.2e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa1G009620 vs. TrEMBL
Match: A0A0A0LRN1_CUCSA (Aldose 1-epimerase OS=Cucumis sativus GN=Csa_1G009630 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 4.9e-24 Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 1
BLAST of Csa1G009620 vs. TrEMBL
Match: A0A0A0LG24_CUCSA (Aldose 1-epimerase OS=Cucumis sativus GN=Csa_3G827250 PE=3 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 3.9e-13 Identity = 39/76 (51.32%), Postives = 60/76 (78.95%), Query Frame = 1
BLAST of Csa1G009620 vs. TrEMBL
Match: A0A161ZNH6_DAUCA (Uncharacterized protein OS=Daucus carota subsp. sativus GN=DCAR_026067 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 5.1e-13 Identity = 36/64 (56.25%), Postives = 51/64 (79.69%), Query Frame = 1
BLAST of Csa1G009620 vs. TrEMBL
Match: D7SIE1_VITVI (Aldose 1-epimerase OS=Vitis vinifera GN=VIT_17s0000g05870 PE=3 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 8.7e-13 Identity = 42/74 (56.76%), Postives = 57/74 (77.03%), Query Frame = 1
BLAST of Csa1G009620 vs. TAIR10
Match: AT5G15140.1 (AT5G15140.1 Galactose mutarotase-like superfamily protein) HSP 1 Score: 60.8 bits (146), Expect = 8.0e-10 Identity = 23/49 (46.94%), Postives = 38/49 (77.55%), Query Frame = 1
BLAST of Csa1G009620 vs. TAIR10
Match: AT3G47800.1 (AT3G47800.1 Galactose mutarotase-like superfamily protein) HSP 1 Score: 60.1 bits (144), Expect = 1.4e-09 Identity = 24/64 (37.50%), Postives = 42/64 (65.62%), Query Frame = 1
BLAST of Csa1G009620 vs. TAIR10
Match: AT3G17940.1 (AT3G17940.1 Galactose mutarotase-like superfamily protein) HSP 1 Score: 54.7 bits (130), Expect = 5.8e-08 Identity = 24/45 (53.33%), Postives = 30/45 (66.67%), Query Frame = 1
BLAST of Csa1G009620 vs. TAIR10
Match: AT3G01260.1 (AT3G01260.1 Galactose mutarotase-like superfamily protein) HSP 1 Score: 51.6 bits (122), Expect = 4.9e-07 Identity = 20/44 (45.45%), Postives = 34/44 (77.27%), Query Frame = 1
BLAST of Csa1G009620 vs. NCBI nr
Match: gi|700208562|gb|KGN63658.1| (hypothetical protein Csa_1G009620 [Cucumis sativus]) HSP 1 Score: 292.4 bits (747), Expect = 4.6e-76 Identity = 149/149 (100.00%), Postives = 149/149 (100.00%), Query Frame = 1
BLAST of Csa1G009620 vs. NCBI nr
Match: gi|659105860|ref|XP_008453190.1| (PREDICTED: aldose 1-epimerase-like [Cucumis melo]) HSP 1 Score: 124.4 bits (311), Expect = 1.7e-25 Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 1
BLAST of Csa1G009620 vs. NCBI nr
Match: gi|449441055|ref|XP_004138299.1| (PREDICTED: aldose 1-epimerase [Cucumis sativus]) HSP 1 Score: 119.0 bits (297), Expect = 7.0e-24 Identity = 62/85 (72.94%), Postives = 72/85 (84.71%), Query Frame = 1
BLAST of Csa1G009620 vs. NCBI nr
Match: gi|659107444|ref|XP_008453675.1| (PREDICTED: aldose 1-epimerase [Cucumis melo]) HSP 1 Score: 99.8 bits (247), Expect = 4.4e-18 Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 1
BLAST of Csa1G009620 vs. NCBI nr
Match: gi|778685582|ref|XP_004147466.2| (PREDICTED: aldose 1-epimerase-like [Cucumis sativus]) HSP 1 Score: 82.8 bits (203), Expect = 5.6e-13 Identity = 39/76 (51.32%), Postives = 60/76 (78.95%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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