Csa1G005700 (gene) Cucumber (Chinese Long) v2

Overview
NameCsa1G005700
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionUnknown protein
LocationChr1 : 1126715 .. 1127140 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAAGAGGGCGGAGGGCATGAAGACGTGTGAAGGTTATTCAAAAGTAGGTCCCGTTTTGGCTGACGTCAGCCTTTATTTATTTTTCTCGACGCGGTTTGAAGGGCCATTTCGCCACCCACACGCTCTCGCATTCTCTGACTGACACACCAATCTACTCTTCCTTTTCCCTCTTTGCCTTTCGCCTCAACGGAAATTTTCTCCAACGATTTTCTTCTTCTTCTTCTTCACTTCTGGCTTACACTCTTCTTCTTCACGGTTGGACTCGGCCACAGCTTCAGATTCTTCTTTTTCAGACCGACCCAGAAAGCTTTGAGGCAAAAAATGACGACTATGATTGAGTTTCAGGGCAAGGAGAGCTCCAATTTGGACGAAGAGTAGAAGGGATCAGATGGGTTTCTTTTTTTTGGCTTATTTTCCTTTT

mRNA sequence

ATGGGGAAGAGGGCGGAGGGCATGAAGACGTGTGAAGGTTATTCAAAAGTAGGTCCCGTTTTGGCTGACGGCCATTTCGCCACCCACACGCTCTCGCATTCTCTGACTGACACACCAATCTACTCTTCCTTTTCCCTCTTTGCCTTTCGCCTCAACGGAAATTTTCTCCAACGATTTTCTTCTTCTTCTTCTTCACTTCTGGCTTACACTCTTCTTCTTCACGGTTGGACTCGGCCACAGCTTCAGATTCTTCTTTTTCAGACCGACCCAGAAAGCTTTGAGGCAAAAAATGACGACTATGATTGA

Coding sequence (CDS)

ATGGGGAAGAGGGCGGAGGGCATGAAGACGTGTGAAGGTTATTCAAAAGTAGGTCCCGTTTTGGCTGACGGCCATTTCGCCACCCACACGCTCTCGCATTCTCTGACTGACACACCAATCTACTCTTCCTTTTCCCTCTTTGCCTTTCGCCTCAACGGAAATTTTCTCCAACGATTTTCTTCTTCTTCTTCTTCACTTCTGGCTTACACTCTTCTTCTTCACGGTTGGACTCGGCCACAGCTTCAGATTCTTCTTTTTCAGACCGACCCAGAAAGCTTTGAGGCAAAAAATGACGACTATGATTGA

Protein sequence

MGKRAEGMKTCEGYSKVGPVLADGHFATHTLSHSLTDTPIYSSFSLFAFRLNGNFLQRFSSSSSSLLAYTLLLHGWTRPQLQILLFQTDPESFEAKNDDYD*
Homology
[Close]
BLAST of Csa1G005700 vs. TrEMBL
Match: A0A0A0LRI7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005700 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 3.2e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MGKRAEGMKTCEGYSKVGPVLADGHFATHTLSHSLTDTPIYSSFSLFAFRLNGNFLQRFS 60
           MGKRAEGMKTCEGYSKVGPVLADGHFATHTLSHSLTDTPIYSSFSLFAFRLNGNFLQRFS
Sbjct: 1   MGKRAEGMKTCEGYSKVGPVLADGHFATHTLSHSLTDTPIYSSFSLFAFRLNGNFLQRFS 60

Query: 61  SSSSSLLAYTLLLHGWTRPQLQILLFQTDPESFEAKNDDYD 102
           SSSSSLLAYTLLLHGWTRPQLQILLFQTDPESFEAKNDDYD
Sbjct: 61  SSSSSLLAYTLLLHGWTRPQLQILLFQTDPESFEAKNDDYD 101

[Close]
BLAST of Csa1G005700 vs. NCBI nr
Match: gi|700208513|gb|KGN63609.1| (hypothetical protein Csa_1G005700 [Cucumis sativus])

HSP 1 Score: 208.8 bits (530), Expect = 4.6e-51
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 1 

Query: 1   MGKRAEGMKTCEGYSKVGPVLADGHFATHTLSHSLTDTPIYSSFSLFAFRLNGNFLQRFS 60
           MGKRAEGMKTCEGYSKVGPVLADGHFATHTLSHSLTDTPIYSSFSLFAFRLNGNFLQRFS
Sbjct: 1   MGKRAEGMKTCEGYSKVGPVLADGHFATHTLSHSLTDTPIYSSFSLFAFRLNGNFLQRFS 60

Query: 61  SSSSSLLAYTLLLHGWTRPQLQILLFQTDPESFEAKNDDYD 102
           SSSSSLLAYTLLLHGWTRPQLQILLFQTDPESFEAKNDDYD
Sbjct: 61  SSSSSLLAYTLLLHGWTRPQLQILLFQTDPESFEAKNDDYD 101

The following BLAST results are available for this feature:
BLAST of Csa1G005700 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LRI7_CUCSA3.2e-51100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005700 PE=4 SV=1[more]
BLAST of Csa1G005700 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|700208513|gb|KGN63609.1|4.6e-51100.00hypothetical protein Csa_1G005700 [Cucumis sativus][more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G005700.1Csa1G005700.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Csa1G005700CSPI01G01710Wild cucumber (PI 183967)cpicuB000
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Csa1G005700Wax gourdcuwgoB007
Csa1G005700Wax gourdcuwgoB070
Csa1G005700Wax gourdcuwgoB095
Csa1G005700Cucumber (Chinese Long) v2cucuB001
Csa1G005700Cucumber (Chinese Long) v2cucuB022
Csa1G005700Cucumber (Chinese Long) v2cucuB029
Csa1G005700Watermelon (97103) v1cuwmB094
Csa1G005700Cucumber (Gy14) v1cgycuB107
Csa1G005700Cucumber (Gy14) v1cgycuB299
Csa1G005700Cucumber (Gy14) v1cgycuB404
Csa1G005700Cucumber (Gy14) v1cgycuB475
Csa1G005700Cucurbita maxima (Rimu)cmacuB048
Csa1G005700Cucurbita maxima (Rimu)cmacuB086
Csa1G005700Cucurbita maxima (Rimu)cmacuB209
Csa1G005700Cucurbita maxima (Rimu)cmacuB235
Csa1G005700Cucurbita maxima (Rimu)cmacuB402
Csa1G005700Cucurbita maxima (Rimu)cmacuB685
Csa1G005700Cucurbita moschata (Rifu)cmocuB076
Csa1G005700Cucurbita moschata (Rifu)cmocuB037
Csa1G005700Cucurbita moschata (Rifu)cmocuB194
Csa1G005700Cucurbita moschata (Rifu)cmocuB222
Csa1G005700Cucurbita moschata (Rifu)cmocuB390
Csa1G005700Cucurbita moschata (Rifu)cmocuB673
Csa1G005700Melon (DHL92) v3.5.1cumeB009
Csa1G005700Melon (DHL92) v3.5.1cumeB019
Csa1G005700Melon (DHL92) v3.5.1cumeB054
Csa1G005700Melon (DHL92) v3.5.1cumeB066
Csa1G005700Watermelon (Charleston Gray)cuwcgB002
Csa1G005700Watermelon (Charleston Gray)cuwcgB005
Csa1G005700Watermelon (Charleston Gray)cuwcgB015
Csa1G005700Watermelon (Charleston Gray)cuwcgB062
Csa1G005700Watermelon (Charleston Gray)cuwcgB081
Csa1G005700Watermelon (97103) v1cuwmB005
Csa1G005700Watermelon (97103) v1cuwmB002
Csa1G005700Watermelon (97103) v1cuwmB037
Csa1G005700Watermelon (97103) v1cuwmB055
Csa1G005700Cucurbita pepo (Zucchini)cpecuB025
Csa1G005700Cucurbita pepo (Zucchini)cpecuB361
Csa1G005700Cucurbita pepo (Zucchini)cpecuB520
Csa1G005700Cucurbita pepo (Zucchini)cpecuB653
Csa1G005700Bottle gourd (USVL1VR-Ls)culsiB070
Csa1G005700Bottle gourd (USVL1VR-Ls)culsiB035
Csa1G005700Bottle gourd (USVL1VR-Ls)culsiB045
Csa1G005700Cucumber (Gy14) v2cgybcuB001
Csa1G005700Cucumber (Gy14) v2cgybcuB011
Csa1G005700Cucumber (Gy14) v2cgybcuB098
Csa1G005700Cucumber (Gy14) v2cgybcuB200
Csa1G005700Melon (DHL92) v3.6.1cumedB004
Csa1G005700Melon (DHL92) v3.6.1cumedB014
Csa1G005700Melon (DHL92) v3.6.1cumedB046
Csa1G005700Melon (DHL92) v3.6.1cumedB060
Csa1G005700Silver-seed gourdcarcuB0391
Csa1G005700Silver-seed gourdcarcuB0524
Csa1G005700Silver-seed gourdcarcuB0638
Csa1G005700Silver-seed gourdcarcuB1018
Csa1G005700Watermelon (97103) v2cuwmbB004
Csa1G005700Watermelon (97103) v2cuwmbB060
Csa1G005700Watermelon (97103) v2cuwmbB078
Csa1G005700Watermelon (97103) v2cuwmbB090