Csa1G005510 (gene) Cucumber (Chinese Long) v2
The following sequences are available for this feature:
Legend: CDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGACTGGGGAGACCGGGACACTTGGTTACATGGCTCCAGAGGTATGCAGTTCTTTTCTTGTAGCCAACTCACACGACAATTAGGAGAGGGGCATCGTCCATAAAATGTTTCACTTTGATTCCATAGTTGTGTTCCTCATTCATTACATGGAAACTGGAATTGGAAACCCTTTGTGGCAGAATATAGCTATCAAAAACATCCCAATGATGGTTTTGCTAAATTTATATCCGTCTATCTGGTTTTACAGGTTCTCAATGGCAACCCATATAACAGGAAATGTGATGTGTACAGCTTCGGTATCTGCCTGTGGGAAATTTATTGCTGTGACATGCCATATCCCGACCTTAGTTTCTCTGAAGTAACCTCTGCCGTGGTTCGTCAGGTAAACTTCCAATTCTTTCACCCTTTCATCTTCATATCTGCAGACTGCAGGACGATGTGCATTTGAGAAGAAACCACTTCATTGTTTTCAACTTATCACTAACTCAACTGACAACATTAATCTCAAAACACTACAGAATCTGAGGCCAGAGATACCGAGATGTTGCCCAAGCTCTCTAGCAAATGTAATGAAGCGTTGCTGGGATGCAACCCCAGACAAGCGACCCGAGATGGATGAAGTAGTTTCCATGTTGGAGGCCATTGACACTTCCAAGGGTGGAGGTATGATTCCTGTTGATCAAGCTCAGGGTTGTCTATGCTTTCGAAAATATAGAGGGCCCTAAAGATTTGTTTGTATGTTTGAATTGGATACGAAAATCTGATAAAAATTATTTTGAAGATGAAAGGGAAAAAACCATAATGTGATTGTGGTAATGACAAATAGAAGAAGTAGGAAAAGAAAAATATCTATATATTTATATATATTGAGGGTGAGGCTAGTAGTAAAATAGATGATGGTGGTGGGTACATAAACCAGGGACTTTGCTGCCTTTCACTTTGCCATTGGATGTAAGCCTTTTGTAATGACATTAAATTGAATGAATTGTAAGATTGAAATGGTA ATGACTGGGGAGACCGGGACACTTGGTTACATGGCTCCAGAGGTTCTCAATGGCAACCCATATAACAGGAAATGTGATGTGTACAGCTTCGGTATCTGCCTGTGGGAAATTTATTGCTGTGACATGCCATATCCCGACCTTAGTTTCTCTGAAGTAACCTCTGCCGTGGTTCGTCAGAATCTGAGGCCAGAGATACCGAGATGTTGCCCAAGCTCTCTAGCAAATGTAATGAAGCGTTGCTGGGATGCAACCCCAGACAAGCGACCCGAGATGGATGAAGTAGTTTCCATGTTGGAGGCCATTGACACTTCCAAGGGTGGAGGTATGATTCCTGTTGATCAAGCTCAGGGTTGTCTATGCTTTCGAAAATATAGAGGGCCCTAA ATGACTGGGGAGACCGGGACACTTGGTTACATGGCTCCAGAGGTTCTCAATGGCAACCCATATAACAGGAAATGTGATGTGTACAGCTTCGGTATCTGCCTGTGGGAAATTTATTGCTGTGACATGCCATATCCCGACCTTAGTTTCTCTGAAGTAACCTCTGCCGTGGTTCGTCAGAATCTGAGGCCAGAGATACCGAGATGTTGCCCAAGCTCTCTAGCAAATGTAATGAAGCGTTGCTGGGATGCAACCCCAGACAAGCGACCCGAGATGGATGAAGTAGTTTCCATGTTGGAGGCCATTGACACTTCCAAGGGTGGAGGTATGATTCCTGTTGATCAAGCTCAGGGTTGTCTATGCTTTCGAAAATATAGAGGGCCCTAA MTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDATPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQAQGCLCFRKYRGP*
BLAST of Csa1G005510 vs. Swiss-Prot
Match: HT1_ARATH (Serine/threonine-protein kinase HT1 OS=Arabidopsis thaliana GN=HT1 PE=1 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 5.3e-20 Identity = 43/100 (43.00%), Postives = 60/100 (60.00%), Query Frame = 1
BLAST of Csa1G005510 vs. Swiss-Prot
Match: STY8_ARATH (Serine/threonine-protein kinase STY8 OS=Arabidopsis thaliana GN=STY8 PE=1 SV=2) HSP 1 Score: 97.4 bits (241), Expect = 1.2e-19 Identity = 43/101 (42.57%), Postives = 63/101 (62.38%), Query Frame = 1
BLAST of Csa1G005510 vs. Swiss-Prot
Match: SHKA_DICDI (Dual specificity protein kinase shkA OS=Dictyostelium discoideum GN=shkA PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 9.9e-19 Identity = 44/100 (44.00%), Postives = 61/100 (61.00%), Query Frame = 1
BLAST of Csa1G005510 vs. Swiss-Prot
Match: YR818_MIMIV (Putative serine/threonine-protein kinase/receptor R818 OS=Acanthamoeba polyphaga mimivirus GN=MIMI_R818 PE=3 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 1.1e-17 Identity = 38/90 (42.22%), Postives = 55/90 (61.11%), Query Frame = 1
HSP 2 Score: 53.1 bits (126), Expect = 2.5e-06 Identity = 35/106 (33.02%), Postives = 48/106 (45.28%), Query Frame = 1
BLAST of Csa1G005510 vs. Swiss-Prot
Match: STY46_ARATH (Serine/threonine-protein kinase STY46 OS=Arabidopsis thaliana GN=STY46 PE=1 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.2e-17 Identity = 41/106 (38.68%), Postives = 61/106 (57.55%), Query Frame = 1
BLAST of Csa1G005510 vs. TrEMBL
Match: A0A0A0LNX6_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G005510 PE=4 SV=1) HSP 1 Score: 276.9 bits (707), Expect = 1.2e-71 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Csa1G005510 vs. TrEMBL
Match: M1CKG3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400026997 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 8.6e-70 Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 1
BLAST of Csa1G005510 vs. TrEMBL
Match: A0A061G0Z7_THECC (Kinase superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_012042 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 8.6e-70 Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = 1
BLAST of Csa1G005510 vs. TrEMBL
Match: A0A0B0N3T3_GOSAR (Serine/threonine-protein kinase HT1 OS=Gossypium arboreum GN=F383_06932 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 1.1e-69 Identity = 123/127 (96.85%), Postives = 125/127 (98.43%), Query Frame = 1
BLAST of Csa1G005510 vs. TrEMBL
Match: V7BYL4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris GN=PHAVU_004G016900g PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 1.1e-69 Identity = 123/127 (96.85%), Postives = 124/127 (97.64%), Query Frame = 1
BLAST of Csa1G005510 vs. TAIR10
Match: AT3G01490.1 (AT3G01490.1 Protein kinase superfamily protein) HSP 1 Score: 260.0 bits (663), Expect = 7.7e-70 Identity = 117/127 (92.13%), Postives = 121/127 (95.28%), Query Frame = 1
BLAST of Csa1G005510 vs. TAIR10
Match: AT5G50000.1 (AT5G50000.1 Protein kinase superfamily protein) HSP 1 Score: 255.0 bits (650), Expect = 2.5e-68 Identity = 115/127 (90.55%), Postives = 119/127 (93.70%), Query Frame = 1
BLAST of Csa1G005510 vs. TAIR10
Match: AT3G22750.1 (AT3G22750.1 Protein kinase superfamily protein) HSP 1 Score: 235.3 bits (599), Expect = 2.0e-62 Identity = 102/127 (80.31%), Postives = 115/127 (90.55%), Query Frame = 1
BLAST of Csa1G005510 vs. TAIR10
Match: AT3G63260.1 (AT3G63260.1 Protein kinase superfamily protein) HSP 1 Score: 228.8 bits (582), Expect = 1.9e-60 Identity = 100/127 (78.74%), Postives = 110/127 (86.61%), Query Frame = 1
BLAST of Csa1G005510 vs. TAIR10
Match: AT4G14780.1 (AT4G14780.1 Protein kinase superfamily protein) HSP 1 Score: 227.3 bits (578), Expect = 5.5e-60 Identity = 99/127 (77.95%), Postives = 108/127 (85.04%), Query Frame = 1
BLAST of Csa1G005510 vs. NCBI nr
Match: gi|449440684|ref|XP_004138114.1| (PREDICTED: serine/threonine-protein kinase HT1-like [Cucumis sativus]) HSP 1 Score: 276.9 bits (707), Expect = 1.7e-71 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Csa1G005510 vs. NCBI nr
Match: gi|700208494|gb|KGN63590.1| (hypothetical protein Csa_1G005510 [Cucumis sativus]) HSP 1 Score: 276.9 bits (707), Expect = 1.7e-71 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Csa1G005510 vs. NCBI nr
Match: gi|659105453|ref|XP_008453100.1| (PREDICTED: serine/threonine-protein kinase HT1-like [Cucumis melo]) HSP 1 Score: 276.9 bits (707), Expect = 1.7e-71 Identity = 127/127 (100.00%), Postives = 127/127 (100.00%), Query Frame = 1
BLAST of Csa1G005510 vs. NCBI nr
Match: gi|747051492|ref|XP_011071834.1| (PREDICTED: serine/threonine-protein kinase HT1-like [Sesamum indicum]) HSP 1 Score: 273.1 bits (697), Expect = 2.5e-70 Identity = 125/127 (98.43%), Postives = 125/127 (98.43%), Query Frame = 1
BLAST of Csa1G005510 vs. NCBI nr
Match: gi|1011998528|ref|XP_015968805.1| (PREDICTED: serine/threonine-protein kinase HT1-like [Arachis duranensis]) HSP 1 Score: 271.9 bits (694), Expect = 5.5e-70 Identity = 123/127 (96.85%), Postives = 126/127 (99.21%), Query Frame = 1
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
This gene is associated with the following unigenes:
The following mRNA feature(s) are a part of this gene:
The following transcribed_cluster feature(s) are associated with this gene:
Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |