Csa1G003540 (gene) Cucumber (Chinese Long) v2

NameCsa1G003540
Typegene
OrganismCucumis. sativus (Cucumber (Chinese Long) v2)
DescriptionElongation factor Tu; contains IPR004541 (Translation elongation factor EFTu/EF1A, bacterial/organelle), IPR027417 (P-loop containing nucleoside triphosphate hydrolase)
LocationChr1 : 606147 .. 607595 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCCATTTCCTTAGCTTCCGTTTCCACTTCTTCTAAGCTTGTTTTCCCTCACCCTTCTTCGTCTTCTTCTTCTCCTTCGTCTTCTTCTTCTTCTTCTTCCCTTTCTTCTACCCTTTTCTCCAAACCCTCTTCCAACCTTTCTTCCTCTTTCTTGAACTCTTCTTCAATTCGTCCTCTCTCCTTCTCTTCCCCTTCTGTAAGCCGTCCTCGTTCCTTAACAATTCGTGCCGCTCGTGGGAAATTTGAGAGGAAGAAACCCCATGTCAATATTGGGACAATTGGCCATGTTGACCATGGTAAAACCACTCTCACTGCTGCTTTAACCATGGCTTTAAGCAAAGCCCCAAAGAAATACGATGAGATTGACGCTGCCCCAGAAGAACGAGCTCGTGGTATTACGATTAATACAGCTACTGTTGAGTACGAGACTGAGAATCGACATTATGCTCATGTTGACTGTCCTGGACATGCTGATTATGTGAAGAATATGATTACTGGTGCTGCTCAAATGGATGGAGCGATTTTGGTTGTTTCTGGTGCTGATGGTCCAATGCCACAGACGAAGGAGCATATTCTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTTTGAACAAGAAGGATCAGGTTGATGATGAGGAGCTTTTGGAGCTTGTGGAGTTGGAGATGCGTGAGTTGCTTTCTTCTTACGAATTCCCAGGTGATGATGTTCCAATTATTGCTGGTTCTGCTTTGTTAGCTTTGGAAGCTTTAATGGCTAACAATAACATAGCTAGAGGTGAAAATGAATGGGTGGATAAAATTTTTGAACTAATGGATGCTGTTGATAGTTATATACCAATACCTGAAAGACAAACAGATCTTCCGTTTTTGCTTGCTGTTGAAGATGTGTTCTCTATTACGGGTCGTGGTACTGTCGCTACAGGGCGTGTTGAAAGAGGAACCGTTAGAGTGGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGAAACACAACTGTAACAGGGGTGGAAATGTTTCAAAAGATTCTTGATGAGGCTTTGGCTGGGGATAATGTTGGGTTGTTGCTTCGAGGTGTTCAGAAGGCTGATATCCAAAGAGGGATGGTCTTAGCCAAGCCTGGCACTATCACCCCACATACCAAGTTTAGTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGACATTCACCCTTTTTTGCTGGTTACAGACCGCAATTCTATATGAGGACGACTGATGTCACTGGCAAGGTGTCTTCAATTATGAACGACAAGGACGAGGAGTCGAAAATGGTTATGCCAGGAGACCGAGTGAAAATGGTTGTGGAACTGATTATGCCTGTGGCTTGTGAACAAGGAATGAGGTTTGCTATCAGAGAAGGTGGAAAGACTGTTGGTGCTGGTGTGATTCAATCAATTATCGAGTGA

mRNA sequence

ATGGCGGCCATTTCCTTAGCTTCCGTTTCCACTTCTTCTAAGCTTGTTTTCCCTCACCCTTCTTCGTCTTCTTCTTCTCCTTCGTCTTCTTCTTCTTCTTCTTCCCTTTCTTCTACCCTTTTCTCCAAACCCTCTTCCAACCTTTCTTCCTCTTTCTTGAACTCTTCTTCAATTCGTCCTCTCTCCTTCTCTTCCCCTTCTGTAAGCCGTCCTCGTTCCTTAACAATTCGTGCCGCTCGTGGGAAATTTGAGAGGAAGAAACCCCATGTCAATATTGGGACAATTGGCCATGTTGACCATGCGATTTTGGTTGTTTCTGGTGCTGATGGTCCAATGCCACAGACGAAGGAGCATATTCTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTTTGAACAAGAAGGATCAGGTTGATGATGAGGAGCTTTTGGAGCTTGTGGAGTTGGAGATGCGTGAGTTGCTTTCTTCTTACGAATTCCCAGGTGATGATGTTCCAATTATTGCTGGTTCTGCTTTGTTAGCTTTGGAAGCTTTAATGGCTAACAATAACATAGCTAGAGGTGAAAATGAATGGGTGGATAAAATTTTTGAACTAATGGATGCTGTTGATAGTTATATACCAATACCTGAAAGACAAACAGATCTTCCGTTTTTGCTTGCTGTTGAAGATGTGTTCTCTATTACGGGTCGTGGTACTGTCGCTACAGGGCGTGTTGAAAGAGGAACCGTTAGAGTGGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGAAACACAACTGTAACAGGGGTGGAAATGTTTCAAAAGATTCTTGATGAGGCTTTGGCTGGGGATAATGTTGGGTTGTTGCTTCGAGGTGTTCAGAAGGCTGATATCCAAAGAGGGATGGTCTTAGCCAAGCCTGGCACTATCACCCCACATACCAAGTTTAGTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGACATTCACCCTTTTTTGCTGGTTACAGACCGCAATTCTATATGAGGACGACTGATGTCACTGGCAAGGTGTCTTCAATTATGAACGACAAGGACGAGGAGTCGAAAATGGTTATGCCAGGAGACCGAGTGAAAATGGTTGTGGAACTGATTATGCCTGTGGCTTGTGAACAAGGAATGAGGTTTGCTATCAGAGAAGGTGGAAAGACTGTTGGTGCTGGTGTGATTCAATCAATTATCGAGTGA

Coding sequence (CDS)

ATGGCGGCCATTTCCTTAGCTTCCGTTTCCACTTCTTCTAAGCTTGTTTTCCCTCACCCTTCTTCGTCTTCTTCTTCTCCTTCGTCTTCTTCTTCTTCTTCTTCCCTTTCTTCTACCCTTTTCTCCAAACCCTCTTCCAACCTTTCTTCCTCTTTCTTGAACTCTTCTTCAATTCGTCCTCTCTCCTTCTCTTCCCCTTCTGTAAGCCGTCCTCGTTCCTTAACAATTCGTGCCGCTCGTGGGAAATTTGAGAGGAAGAAACCCCATGTCAATATTGGGACAATTGGCCATGTTGACCATGCGATTTTGGTTGTTTCTGGTGCTGATGGTCCAATGCCACAGACGAAGGAGCATATTCTGTTGGCTAAGCAAGTGGGTGTTCCTAATATGGTGGTGTTTTTGAACAAGAAGGATCAGGTTGATGATGAGGAGCTTTTGGAGCTTGTGGAGTTGGAGATGCGTGAGTTGCTTTCTTCTTACGAATTCCCAGGTGATGATGTTCCAATTATTGCTGGTTCTGCTTTGTTAGCTTTGGAAGCTTTAATGGCTAACAATAACATAGCTAGAGGTGAAAATGAATGGGTGGATAAAATTTTTGAACTAATGGATGCTGTTGATAGTTATATACCAATACCTGAAAGACAAACAGATCTTCCGTTTTTGCTTGCTGTTGAAGATGTGTTCTCTATTACGGGTCGTGGTACTGTCGCTACAGGGCGTGTTGAAAGAGGAACCGTTAGAGTGGGAGAGACAGTGGATATTGTGGGATTGAGGGAAACTAGAAACACAACTGTAACAGGGGTGGAAATGTTTCAAAAGATTCTTGATGAGGCTTTGGCTGGGGATAATGTTGGGTTGTTGCTTCGAGGTGTTCAGAAGGCTGATATCCAAAGAGGGATGGTCTTAGCCAAGCCTGGCACTATCACCCCACATACCAAGTTTAGTGCAGTTGTGTATGTGTTGAAGAAGGAAGAGGGTGGTAGACATTCACCCTTTTTTGCTGGTTACAGACCGCAATTCTATATGAGGACGACTGATGTCACTGGCAAGGTGTCTTCAATTATGAACGACAAGGACGAGGAGTCGAAAATGGTTATGCCAGGAGACCGAGTGAAAATGGTTGTGGAACTGATTATGCCTGTGGCTTGTGAACAAGGAATGAGGTTTGCTATCAGAGAAGGTGGAAAGACTGTTGGTGCTGGTGTGATTCAATCAATTATCGAGTGA

Protein sequence

MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRPLSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE*
BLAST of Csa1G003540 vs. Swiss-Prot
Match: EFTU2_SOYBN (Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1)

HSP 1 Score: 570.1 bits (1468), Expect = 2.0e-161
Identity = 288/353 (81.59%), Postives = 317/353 (89.80%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 127 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 186

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPN+VVFLNK+DQVDDEELL+LVELE+RELLS YEFPGDDVPII+GSAL
Sbjct: 187 KEHILLAKQVGVPNIVVFLNKQDQVDDEELLQLVELEVRELLSKYEFPGDDVPIISGSAL 246

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           L+LEALMAN +I RGEN+WVDKI+ELM+AVD YIPIP+RQT+LPFLLA+EDVF+ITGRGT
Sbjct: 247 LSLEALMANPSIKRGENQWVDKIYELMEAVDDYIPIPQRQTELPFLLAIEDVFTITGRGT 306

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGT+RVGETVDIVG+++TRNTTVTGVEMFQKILDEALAGDNVGLLLRG+QK D
Sbjct: 307 VATGRVERGTIRVGETVDIVGVKDTRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTD 366

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKFSA+VYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTGKV+ IM
Sbjct: 367 IQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIM 426

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           NDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 427 NDKDEESKMVMPGDRVKLVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479


HSP 2 Score: 82.4 bits (202), Expect = 1.2e-14
Identity = 51/106 (48.11%), Postives = 69/106 (65.09%), Query Frame = 1

Query: 3   AISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRPLS 62
           AIS A+ +T+SKL +P     S SPSS+     L        +++LSSSF++ ++I  L+
Sbjct: 2   AISWAA-ATTSKLAYPPHVHFSPSPSSNY----LFLKTHKPSATHLSSSFIHPTTILHLA 61

Query: 63  FSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
            ++ + +R RS T+RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 62  AAN-TTTRRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 101

BLAST of Csa1G003540 vs. Swiss-Prot
Match: EFTUA_NICSY (Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris GN=TUFA PE=2 SV=2)

HSP 1 Score: 561.6 bits (1446), Expect = 7.0e-159
Identity = 285/353 (80.74%), Postives = 312/353 (88.39%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILV SGADGPMPQT
Sbjct: 126 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSGADGPMPQT 185

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELLSSYEFPGDD+PII+GSAL
Sbjct: 186 KEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIISGSAL 245

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LALEALMAN +I RGEN+WVDKI+ELMDAVDSYIPIP RQT+LPFL+A+EDVFSITGRGT
Sbjct: 246 LALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELPFLMAIEDVFSITGRGT 305

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGTVR+G+TVDIVGL++TR+TTVTGVEMFQKILDEA+AGDNVGLLLRG+QK D
Sbjct: 306 VATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKID 365

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTGKV+SI 
Sbjct: 366 IQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSIT 425

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
            DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ IIE
Sbjct: 426 TDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478


HSP 2 Score: 87.4 bits (215), Expect = 3.9e-16
Identity = 53/108 (49.07%), Postives = 68/108 (62.96%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MA+IS A+ ++S+KLV    SS+S++P   SS+      L S  + N S+ FL+S    P
Sbjct: 1   MASISAATATSSTKLV----SSNSTNPLLPSSTKPSKLILSSSFTPNCSTLFLHS----P 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
            + SS +  R R  T+RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 61  ATPSSTATHRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 100

BLAST of Csa1G003540 vs. Swiss-Prot
Match: EFTU_TOBAC (Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 7.0e-159
Identity = 285/353 (80.74%), Postives = 312/353 (88.39%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILV SGADGPMPQT
Sbjct: 126 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSGADGPMPQT 185

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELLSSYEFPGDD+PII+GSAL
Sbjct: 186 KEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIISGSAL 245

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LALEALMAN +I RGEN+WVDKI+ELMDAVDSYIPIP RQT+LPFL+A+EDVFSITGRGT
Sbjct: 246 LALEALMANPSIKRGENQWVDKIYELMDAVDSYIPIPVRQTELPFLMAIEDVFSITGRGT 305

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGTVR+G+TVDIVGL++TR+TTVTGVEMFQKILDEA+AGDNVGLLLRG+QK D
Sbjct: 306 VATGRVERGTVRIGDTVDIVGLKDTRSTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKID 365

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTGKV+SI 
Sbjct: 366 IQRGMVLAKPGTITPHTKFEAIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTSIT 425

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
            DK EESKMVMPGDRV +VVELIMPVACEQGMRFAIREGGKTVGAGVIQ IIE
Sbjct: 426 TDKGEESKMVMPGDRVNLVVELIMPVACEQGMRFAIREGGKTVGAGVIQKIIE 478


HSP 2 Score: 87.4 bits (215), Expect = 3.9e-16
Identity = 53/108 (49.07%), Postives = 68/108 (62.96%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MA+IS A+ ++S+KLV    SS+S++P   SS+      L S  + N S+ FL+S    P
Sbjct: 1   MASISAATATSSTKLV----SSNSTNPLLPSSTKPSKLILSSSFTPNCSTLFLHS----P 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
            + SS +  R R  T+RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 61  ATPSSTATHRHRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 100

BLAST of Csa1G003540 vs. Swiss-Prot
Match: EFTUB_NICSY (Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1)

HSP 1 Score: 560.8 bits (1444), Expect = 1.2e-158
Identity = 285/353 (80.74%), Postives = 312/353 (88.39%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 133 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 192

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPNMVVFLNK+DQVDDEELLELVELE+RELLSSYEFPGD++PII+GSAL
Sbjct: 193 KEHILLAKQVGVPNMVVFLNKQDQVDDEELLELVELEVRELLSSYEFPGDEIPIISGSAL 252

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LALEALMAN +I RGEN+WVDKI++LMD VD YIPIP+RQT+LPFL+A+EDVFSITGRGT
Sbjct: 253 LALEALMANPSIKRGENQWVDKIYQLMDNVDEYIPIPQRQTELPFLMAIEDVFSITGRGT 312

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGTV+VGE VDIVGL++TRNTTVTGVEMFQKILDEA+AGDNVGLLLRG+QK D
Sbjct: 313 VATGRVERGTVKVGEIVDIVGLKDTRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKID 372

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKF A+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV+ IM
Sbjct: 373 IQRGMVLAKPGTITPHTKFEALVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTVIM 432

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           +DK EESKMVMPGDRV MVVELIMPVACEQGMRFAIREGGKTVGAGVIQ I+E
Sbjct: 433 SDKGEESKMVMPGDRVNMVVELIMPVACEQGMRFAIREGGKTVGAGVIQKILE 485


HSP 2 Score: 89.7 bits (221), Expect = 7.8e-17
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 1

Query: 1   MAAISLASVST--SSKLVFPH-PSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSS 60
           MA+IS AS +   S+KL +P+ PSSSSSS ++++   S SS L       LSSSF  + S
Sbjct: 1   MASISAASATATASTKLAYPYSPSSSSSSSNTAAVFPSNSSKLI------LSSSFTPTPS 60

Query: 61  IRPLSF--SSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
              L    ++PS + PR  T+RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 61  TLFLHSPTTTPSTTHPRRFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 107

BLAST of Csa1G003540 vs. Swiss-Prot
Match: EFTU_ARATH (Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1)

HSP 1 Score: 552.7 bits (1423), Expect = 3.3e-156
Identity = 281/353 (79.60%), Postives = 310/353 (87.82%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 124 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 183

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVP+MVVFLNK+DQVDD ELLELVELE+RELLSSYEF GDD+PII+GSAL
Sbjct: 184 KEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYEFNGDDIPIISGSAL 243

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LA+E L  N  + RG+N+WVDKI+ELMDAVD YIPIP+RQT+LPFLLAVEDVFSITGRGT
Sbjct: 244 LAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGT 303

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGTV+VGETVD+VGLRETR+ TVTGVEMFQKILDEALAGDNVGLLLRG+QKAD
Sbjct: 304 VATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQKAD 363

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPG+ITPHTKF A++YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV+ IM
Sbjct: 364 IQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIM 423

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           NDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVI +I+E
Sbjct: 424 NDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476


HSP 2 Score: 80.9 bits (198), Expect = 3.6e-14
Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MA  + A+ S+SS+++  + S S S   + S+S  L +         LSSSFL S S   
Sbjct: 1   MAISAPAACSSSSRILCSYSSPSPSLCPAISTSGKLKTL-------TLSSSFLPSYS--- 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
           L+ +S S S  RS T+RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 61  LTTTSASQSTRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 98

BLAST of Csa1G003540 vs. TrEMBL
Match: A0A0A0LRZ6_CUCSA (Elongation factor Tu OS=Cucumis sativus GN=Csa_1G003540 PE=4 SV=1)

HSP 1 Score: 786.6 bits (2030), Expect = 1.5e-224
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGADGPMPQTKEHIL 120
           LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGADGPMPQTKEHIL
Sbjct: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGADGPMPQTKEHIL 120

Query: 121 LAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSALLALEA 180
           LAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSALLALEA
Sbjct: 121 LAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSALLALEA 180

Query: 181 LMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGR 240
           LMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGR
Sbjct: 181 LMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGR 240

Query: 241 VERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGM 300
           VERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGM
Sbjct: 241 VERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGM 300

Query: 301 VLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDE 360
           VLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDE
Sbjct: 301 VLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDE 360

Query: 361 ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 361 ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 408

BLAST of Csa1G003540 vs. TrEMBL
Match: A0A067K4G2_JATCU (Elongation factor Tu OS=Jatropha curcas GN=JCGZ_11398 PE=3 SV=1)

HSP 1 Score: 583.9 bits (1504), Expect = 1.5e-163
Identity = 298/353 (84.42%), Postives = 323/353 (91.50%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 130 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 189

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELLSSYEFPGDD+PII+GSAL
Sbjct: 190 KEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIISGSAL 249

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LALEALMAN +I RG+N+WVDKI+ELMD+VDSYIPIP+RQTDLPFLLA+EDVFSITGRGT
Sbjct: 250 LALEALMANPSIKRGDNQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAIEDVFSITGRGT 309

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGTV+VGETVDIVGLRETRNTTVTGVEMFQKILD+A+AGDNVGLLLRGVQKAD
Sbjct: 310 VATGRVERGTVKVGETVDIVGLRETRNTTVTGVEMFQKILDDAMAGDNVGLLLRGVQKAD 369

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKFSA+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV+SIM
Sbjct: 370 IQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIM 429

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           NDKDEESKMVMPGDRVKMVVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 430 NDKDEESKMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 482

BLAST of Csa1G003540 vs. TrEMBL
Match: A0A067K4G2_JATCU (Elongation factor Tu OS=Jatropha curcas GN=JCGZ_11398 PE=3 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 8.1e-13
Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MA  + A+VS+SSKL + H S S ++ S S  +     TL S   S+  S FL +++   
Sbjct: 1   MAISASATVSSSSKLAYSHVSPSPTTTSYSKPTKLTPKTLLS---SSFISPFLTTTTSSA 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
            + ++ S  R RS  +RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 61  SATTAISTRR-RSFAVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 104


HSP 2 Score: 583.2 bits (1502), Expect = 2.5e-163
Identity = 297/353 (84.14%), Postives = 321/353 (90.93%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 135 RARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 194

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELL+SYEFPGDD+PI++GSAL
Sbjct: 195 KEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLASYEFPGDDIPIVSGSAL 254

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LALEALMAN +I RGENEWVDKI+ELMDAVDSYIPIP+RQTDLPFLLAVEDVFSITGRGT
Sbjct: 255 LALEALMANPSIKRGENEWVDKIYELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGT 314

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGT++VGETVD+VGLRETR TTVTGVEMFQKILDEALAGDNVGLLLRG+QKAD
Sbjct: 315 VATGRVERGTIKVGETVDLVGLRETRATTVTGVEMFQKILDEALAGDNVGLLLRGIQKAD 374

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKFSA+VY+LKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV+ IM
Sbjct: 375 IQRGMVLAKPGTITPHTKFSAIVYILKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVAQIM 434

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 435 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 487

BLAST of Csa1G003540 vs. TrEMBL
Match: F6HUT0_VITVI (Elongation factor Tu OS=Vitis vinifera GN=VIT_14s0066g00220 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14
Identity = 58/113 (51.33%), Postives = 72/113 (63.72%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MA+I + + ST SK +F  PS S+  P+S    +    TL +K +   +SSF N+SSI  
Sbjct: 1   MASI-VGAPSTPSKSLFTSPSLSNPKPTSFFHKTQ---TLATKSNPPFASSFTNASSIFR 60

Query: 61  LS-FSSPSVS----RPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
            S  SSPS      R RSLT+RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 61  YSVLSSPSTGSSPFRRRSLTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 109


HSP 2 Score: 582.4 bits (1500), Expect = 4.3e-163
Identity = 297/353 (84.14%), Postives = 323/353 (91.50%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 134 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 193

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELLSSYEFPGDDVPII+GSAL
Sbjct: 194 KEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDVPIISGSAL 253

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LALEALMAN +I RGEN+WVDKI+ELMD+VDSYIPIP+RQTDLPFLLA+EDVFSITGRGT
Sbjct: 254 LALEALMANPSIKRGENQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAIEDVFSITGRGT 313

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGT++VGETVDIVGL++TR+TTVTGVEMFQKILDEALAGDNVG+LLRGVQKAD
Sbjct: 314 VATGRVERGTIKVGETVDIVGLKDTRSTTVTGVEMFQKILDEALAGDNVGILLRGVQKAD 373

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKF+A+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV+SIM
Sbjct: 374 IQRGMVLAKPGTITPHTKFAAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIM 433

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 434 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 486

BLAST of Csa1G003540 vs. TrEMBL
Match: F6GTR5_VITVI (Elongation factor Tu OS=Vitis vinifera GN=VIT_17s0000g09370 PE=3 SV=1)

HSP 1 Score: 89.0 bits (219), Expect = 1.5e-14
Identity = 53/108 (49.07%), Postives = 69/108 (63.89%), Query Frame = 1

Query: 3   AISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRPL- 62
           AIS  S S S+KL++P P  SS S SS++ +    S    K  SNLSSSFL+  S   L 
Sbjct: 2   AISATSASASTKLIYPSPPPSSPS-SSTTLALCTPSPRTRKHPSNLSSSFLSKPSTTFLL 61

Query: 63  -SFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
              ++ + ++ RS T+RAARGKFER KPH+NIGTIGHVDH    ++ A
Sbjct: 62  TPTTTATTTQRRSFTVRAARGKFERNKPHLNIGTIGHVDHGKTTLTAA 108


HSP 2 Score: 580.5 bits (1495), Expect = 1.6e-162
Identity = 310/422 (73.46%), Postives = 349/422 (82.70%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MA  + A+ S+SS+L+ P     S  P+ S+S+S+   TL      NLSSS  NS + + 
Sbjct: 1   MAISTPAACSSSSRLISP----PSLRPAISTSTSTNLKTL------NLSSSLGNSVAKKY 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVS 120
               +    R R +TI  A  ++E +  H  ++   GH D+             AILVVS
Sbjct: 61  DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 120

Query: 121 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDD 180
           GADGPMPQTKEHILLAKQVGVP+MVVFLNK+DQVDD ELLELVELE+RELLSSYEF GDD
Sbjct: 121 GADGPMPQTKEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYEFNGDD 180

Query: 181 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 240
           +PII+GSALLA+E L  N N+ RG+N+WVDKI+ELMDAVDSYIPIP+RQT+LPFLLAVED
Sbjct: 181 IPIISGSALLAVETLTENPNVKRGDNKWVDKIYELMDAVDSYIPIPQRQTELPFLLAVED 240

Query: 241 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 300
           VFSITGRGTVATGRVERGTV+VGETVD+VGLRETRN TVTGVEMFQKILDEALAGDNVGL
Sbjct: 241 VFSITGRGTVATGRVERGTVKVGETVDLVGLRETRNYTVTGVEMFQKILDEALAGDNVGL 300

Query: 301 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 360
           LLRG+QKADIQRGMVLAKPG+ITPHTKF A+VYVLKKEEGGRHSPFFAGYRPQFYMRTTD
Sbjct: 301 LLRGIQKADIQRGMVLAKPGSITPHTKFEAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 360

Query: 361 VTGKVSSIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSI 409
           VTGKV+ IMNDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVIQSI
Sbjct: 361 VTGKVTKIMNDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIQSI 412

BLAST of Csa1G003540 vs. TAIR10
Match: AT4G20360.1 (AT4G20360.1 RAB GTPase homolog E1B)

HSP 1 Score: 552.7 bits (1423), Expect = 1.8e-157
Identity = 281/353 (79.60%), Postives = 310/353 (87.82%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 124 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 183

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVP+MVVFLNK+DQVDD ELLELVELE+RELLSSYEF GDD+PII+GSAL
Sbjct: 184 KEHILLAKQVGVPDMVVFLNKEDQVDDAELLELVELEVRELLSSYEFNGDDIPIISGSAL 243

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LA+E L  N  + RG+N+WVDKI+ELMDAVD YIPIP+RQT+LPFLLAVEDVFSITGRGT
Sbjct: 244 LAVETLTENPKVKRGDNKWVDKIYELMDAVDDYIPIPQRQTELPFLLAVEDVFSITGRGT 303

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGTV+VGETVD+VGLRETR+ TVTGVEMFQKILDEALAGDNVGLLLRG+QKAD
Sbjct: 304 VATGRVERGTVKVGETVDLVGLRETRSYTVTGVEMFQKILDEALAGDNVGLLLRGIQKAD 363

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPG+ITPHTKF A++YVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV+ IM
Sbjct: 364 IQRGMVLAKPGSITPHTKFEAIIYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTKIM 423

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           NDKDEESKMVMPGDRVK+VVELI+PVACEQGMRFAIREGGKTVGAGVI +I+E
Sbjct: 424 NDKDEESKMVMPGDRVKIVVELIVPVACEQGMRFAIREGGKTVGAGVIGTILE 476


HSP 2 Score: 80.9 bits (198), Expect = 2.0e-15
Identity = 52/108 (48.15%), Postives = 65/108 (60.19%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MA  + A+ S+SS+++  + S S S   + S+S  L +         LSSSFL S S   
Sbjct: 1   MAISAPAACSSSSRILCSYSSPSPSLCPAISTSGKLKTL-------TLSSSFLPSYS--- 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
           L+ +S S S  RS T+RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 61  LTTTSASQSTRRSFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 98

BLAST of Csa1G003540 vs. TAIR10
Match: AT4G02930.1 (AT4G02930.1 GTP binding Elongation factor Tu family protein)

HSP 1 Score: 389.0 bits (998), Expect = 3.5e-108
Identity = 209/355 (58.87%), Postives = 252/355 (70.99%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDHA-------------ILVVSGADGPMPQT 129
           + R +TI  A  ++E  K H  ++   GH D+              ILVVSG DGPMPQT
Sbjct: 112 KKRGITIATAHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGGILVVSGPDGPMPQT 171

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLA+QVGVP++V FLNK D VDD ELLELVE+E+RELLS Y+FPGDD+PII GSAL
Sbjct: 172 KEHILLARQVGVPSLVCFLNKVDVVDDPELLELVEMELRELLSFYKFPGDDIPIIRGSAL 231

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
            AL+    N+ I R        I +LMDAVD YIP P R  D PFL+ +EDVFSI GRGT
Sbjct: 232 SALQG--TNDEIGR------QAILKLMDAVDEYIPDPVRVLDKPFLMPIEDVFSIQGRGT 291

Query: 250 VATGRVERGTVRVGETVDIVGLRE---TRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQ 309
           VATGR+E+G ++VGE V+I+GLRE      +TVTGVEMF+KILD   AGDNVGLLLRG++
Sbjct: 292 VATGRIEQGVIKVGEEVEILGLREGGVPLKSTVTGVEMFKKILDNGQAGDNVGLLLRGLK 351

Query: 310 KADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVS 369
           + DIQRGMV+AKPG+   + KF A +YVL K+EGGRH+ FF+ YRPQFY+RT D+TGKV 
Sbjct: 352 REDIQRGMVIAKPGSCKTYKKFEAEIYVLTKDEGGRHTAFFSNYRPQFYLRTADITGKV- 411

Query: 370 SIMNDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSII 408
               +  E  KMVMPGD V  V ELIMPV  E G RFA+REGG+TVGAGV+  ++
Sbjct: 412 ----ELPENVKMVMPGDNVTAVFELIMPVPLETGQRFALREGGRTVGAGVVSKVM 453


HSP 2 Score: 47.4 bits (111), Expect = 2.5e-05
Identity = 31/96 (32.29%), Postives = 48/96 (50.00%), Query Frame = 1

Query: 13  SKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRPLSFSSPSVSRPR 72
           + +V  +PSS    P         SS ++S+  ++++SS+  S SI     SS +     
Sbjct: 2   ASVVLRNPSSKRLVP--------FSSQIYSRCGASVTSSYSISHSIGGDDLSSSTFG--- 61

Query: 73  SLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
           + +   +   F R KPHVN+GTIGHVDH    ++ A
Sbjct: 62  TSSFWRSMATFTRNKPHVNVGTIGHVDHGKTTLTAA 86

BLAST of Csa1G003540 vs. NCBI nr
Match: gi|700208441|gb|KGN63537.1| (Elongation factor Tu [Cucumis sativus])

HSP 1 Score: 786.6 bits (2030), Expect = 2.1e-224
Identity = 408/408 (100.00%), Postives = 408/408 (100.00%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGADGPMPQTKEHIL 120
           LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGADGPMPQTKEHIL
Sbjct: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGADGPMPQTKEHIL 120

Query: 121 LAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSALLALEA 180
           LAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSALLALEA
Sbjct: 121 LAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSALLALEA 180

Query: 181 LMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGR 240
           LMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGR
Sbjct: 181 LMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGTVATGR 240

Query: 241 VERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGM 300
           VERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGM
Sbjct: 241 VERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKADIQRGM 300

Query: 301 VLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDE 360
           VLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDE
Sbjct: 301 VLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIMNDKDE 360

Query: 361 ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 361 ESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 408

BLAST of Csa1G003540 vs. NCBI nr
Match: gi|778655478|ref|XP_004138088.2| (PREDICTED: elongation factor Tu, chloroplastic [Cucumis sativus])

HSP 1 Score: 643.7 bits (1659), Expect = 2.2e-181
Identity = 361/482 (74.90%), Postives = 377/482 (78.22%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSS------------SSSSLSSTL-------- 60
           MAAISLASVSTSSKLVFPHPSSSSSSPSSSS             SS+LSS+         
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60

Query: 61  --FSKPS-----------------------------------SNLSSSFLNSSSIRPLSF 120
             FS PS                                   + L+++   + S  P  +
Sbjct: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKY 120

Query: 121 SSPSVS---RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVS 180
                +   R R +TI  A  ++E +  H  ++   GH D+             AILVVS
Sbjct: 121 DEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVS 180

Query: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDD 240
           GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDD
Sbjct: 181 GADGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDD 240

Query: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300
           VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED
Sbjct: 241 VPIIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVED 300

Query: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360
           VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL
Sbjct: 301 VFSITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGL 360

Query: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 409
           LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD
Sbjct: 361 LLRGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTD 420

BLAST of Csa1G003540 vs. NCBI nr
Match: gi|659129067|ref|XP_008464512.1| (PREDICTED: elongation factor Tu, chloroplastic [Cucumis melo])

HSP 1 Score: 639.8 bits (1649), Expect = 3.2e-180
Identity = 361/480 (75.21%), Postives = 376/480 (78.33%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSS-------SSSPSSS---SSSSSLSSTL---------- 60
           MAAISLASVSTSSKLVFPHPSSS       SSSPSSS     SS+LSS+           
Sbjct: 1   MAAISLASVSTSSKLVFPHPSSSPSPSPSSSSSPSSSLFSKPSSNLSSSFLNSSSIRPFS 60

Query: 61  FSKPSSN-----------------------------------LSSSFLNSSSIRPLSFSS 120
           FS PS N                                   L+++   + S  P  +  
Sbjct: 61  FSSPSVNRPRSLTIRAARGKFERKKPHVNIGTIGHVDHGKTTLTAALTMALSKAPKKYDE 120

Query: 121 PSVS---RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGA 180
              +   R R +TI  A  ++E +  H  ++   GH D+             AILVVSGA
Sbjct: 121 IDAAPEERARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGA 180

Query: 181 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVP 240
           DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVP
Sbjct: 181 DGPMPQTKEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVP 240

Query: 241 IIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF 300
           IIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF
Sbjct: 241 IIAGSALLALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVF 300

Query: 301 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 360
           SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL
Sbjct: 301 SITGRGTVATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLL 360

Query: 361 RGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 409
           RGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT
Sbjct: 361 RGVQKADIQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVT 420

BLAST of Csa1G003540 vs. NCBI nr
Match: gi|802650137|ref|XP_012079972.1| (PREDICTED: elongation factor Tu, chloroplastic [Jatropha curcas])

HSP 1 Score: 583.9 bits (1504), Expect = 2.1e-163
Identity = 298/353 (84.42%), Postives = 323/353 (91.50%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 130 RARGITINTATVEYETENRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 189

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELLSSYEFPGDD+PII+GSAL
Sbjct: 190 KEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLSSYEFPGDDIPIISGSAL 249

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LALEALMAN +I RG+N+WVDKI+ELMD+VDSYIPIP+RQTDLPFLLA+EDVFSITGRGT
Sbjct: 250 LALEALMANPSIKRGDNQWVDKIYELMDSVDSYIPIPQRQTDLPFLLAIEDVFSITGRGT 309

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGTV+VGETVDIVGLRETRNTTVTGVEMFQKILD+A+AGDNVGLLLRGVQKAD
Sbjct: 310 VATGRVERGTVKVGETVDIVGLRETRNTTVTGVEMFQKILDDAMAGDNVGLLLRGVQKAD 369

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKFSA+VYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV+SIM
Sbjct: 370 IQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIM 429

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           NDKDEESKMVMPGDRVKMVVELI+PVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 430 NDKDEESKMVMPGDRVKMVVELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 482

BLAST of Csa1G003540 vs. NCBI nr
Match: gi|802650137|ref|XP_012079972.1| (PREDICTED: elongation factor Tu, chloroplastic [Jatropha curcas])

HSP 1 Score: 83.2 bits (204), Expect = 1.2e-12
Identity = 50/108 (46.30%), Postives = 67/108 (62.04%), Query Frame = 1

Query: 1   MAAISLASVSTSSKLVFPHPSSSSSSPSSSSSSSSLSSTLFSKPSSNLSSSFLNSSSIRP 60
           MA  + A+VS+SSKL + H S S ++ S S  +     TL S   S+  S FL +++   
Sbjct: 1   MAISASATVSSSSKLAYSHVSPSPTTTSYSKPTKLTPKTLLS---SSFISPFLTTTTSSA 60

Query: 61  LSFSSPSVSRPRSLTIRAARGKFERKKPHVNIGTIGHVDHAILVVSGA 109
            + ++ S  R RS  +RAARGKFERKKPHVNIGTIGHVDH    ++ A
Sbjct: 61  SATTAISTRR-RSFAVRAARGKFERKKPHVNIGTIGHVDHGKTTLTAA 104


HSP 2 Score: 583.2 bits (1502), Expect = 3.6e-163
Identity = 297/353 (84.14%), Postives = 321/353 (90.93%), Query Frame = 1

Query: 70  RPRSLTIRAARGKFERKKPH-VNIGTIGHVDH-------------AILVVSGADGPMPQT 129
           R R +TI  A  ++E +  H  ++   GH D+             AILVVSGADGPMPQT
Sbjct: 135 RARGITINTATVEYETESRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQT 194

Query: 130 KEHILLAKQVGVPNMVVFLNKKDQVDDEELLELVELEMRELLSSYEFPGDDVPIIAGSAL 189
           KEHILLAKQVGVPNMVVFLNK+DQVDDEELL+LVELE+RELL+SYEFPGDD+PI++GSAL
Sbjct: 195 KEHILLAKQVGVPNMVVFLNKQDQVDDEELLQLVELEVRELLASYEFPGDDIPIVSGSAL 254

Query: 190 LALEALMANNNIARGENEWVDKIFELMDAVDSYIPIPERQTDLPFLLAVEDVFSITGRGT 249
           LALEALMAN +I RGENEWVDKI+ELMDAVDSYIPIP+RQTDLPFLLAVEDVFSITGRGT
Sbjct: 255 LALEALMANPSIKRGENEWVDKIYELMDAVDSYIPIPQRQTDLPFLLAVEDVFSITGRGT 314

Query: 250 VATGRVERGTVRVGETVDIVGLRETRNTTVTGVEMFQKILDEALAGDNVGLLLRGVQKAD 309
           VATGRVERGT++VGETVD+VGLRETR TTVTGVEMFQKILDEALAGDNVGLLLRG+QKAD
Sbjct: 315 VATGRVERGTIKVGETVDLVGLRETRATTVTGVEMFQKILDEALAGDNVGLLLRGIQKAD 374

Query: 310 IQRGMVLAKPGTITPHTKFSAVVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVSSIM 369
           IQRGMVLAKPGTITPHTKFSA+VY+LKKEEGGRHSPFFAGYRPQFYMRTTDVTGKV+ IM
Sbjct: 375 IQRGMVLAKPGTITPHTKFSAIVYILKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVAQIM 434

Query: 370 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 409
           NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 435 NDKDEESKMVMPGDRVKMVVELIMPVACEQGMRFAIREGGKTVGAGVIQSIIE 487

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
EFTU2_SOYBN2.0e-16181.59Elongation factor Tu, chloroplastic OS=Glycine max GN=TUFB1 PE=3 SV=1[more]
EFTUA_NICSY7.0e-15980.74Elongation factor TuA, chloroplastic OS=Nicotiana sylvestris GN=TUFA PE=2 SV=2[more]
EFTU_TOBAC7.0e-15980.74Elongation factor Tu, chloroplastic OS=Nicotiana tabacum GN=TUFA PE=3 SV=1[more]
EFTUB_NICSY1.2e-15880.74Elongation factor TuB, chloroplastic OS=Nicotiana sylvestris GN=TUFB PE=2 SV=1[more]
EFTU_ARATH3.3e-15679.60Elongation factor Tu, chloroplastic OS=Arabidopsis thaliana GN=TUFA PE=1 SV=1[more]
Match NameE-valueIdentityDescription
A0A0A0LRZ6_CUCSA1.5e-224100.00Elongation factor Tu OS=Cucumis sativus GN=Csa_1G003540 PE=4 SV=1[more]
A0A067K4G2_JATCU1.5e-16384.42Elongation factor Tu OS=Jatropha curcas GN=JCGZ_11398 PE=3 SV=1[more]
A0A067K4G2_JATCU8.1e-1346.30Elongation factor Tu OS=Jatropha curcas GN=JCGZ_11398 PE=3 SV=1[more]
F6HUT0_VITVI1.5e-1451.33Elongation factor Tu OS=Vitis vinifera GN=VIT_14s0066g00220 PE=3 SV=1[more]
F6GTR5_VITVI1.5e-1449.07Elongation factor Tu OS=Vitis vinifera GN=VIT_17s0000g09370 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
AT4G20360.11.8e-15779.60 RAB GTPase homolog E1B[more]
AT4G02930.13.5e-10858.87 GTP binding Elongation factor Tu family protein[more]
Match NameE-valueIdentityDescription
gi|700208441|gb|KGN63537.1|2.1e-224100.00Elongation factor Tu [Cucumis sativus][more]
gi|778655478|ref|XP_004138088.2|2.2e-18174.90PREDICTED: elongation factor Tu, chloroplastic [Cucumis sativus][more]
gi|659129067|ref|XP_008464512.1|3.2e-18075.21PREDICTED: elongation factor Tu, chloroplastic [Cucumis melo][more]
gi|802650137|ref|XP_012079972.1|2.1e-16384.42PREDICTED: elongation factor Tu, chloroplastic [Jatropha curcas][more]
gi|802650137|ref|XP_012079972.1|1.2e-1246.30PREDICTED: elongation factor Tu, chloroplastic [Jatropha curcas][more]
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR004160Transl_elong_EFTu/EF1A_C
IPR004161EFTu-like_2
IPR004541Transl_elong_EFTu/EF1A_bac/org
IPR009000Transl_B-barrel_sf
IPR009001Transl_elong_EF1A/Init_IF2_C
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003746translation elongation factor activity
Vocabulary: Cellular Component
TermDefinition
GO:0005622intracellular
Vocabulary: Biological Process
TermDefinition
GO:0006414translational elongation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0042335 cuticle development
biological_process GO:0006448 regulation of translational elongation
biological_process GO:0000038 very long-chain fatty acid metabolic process
biological_process GO:0006414 translational elongation
cellular_component GO:0048046 apoplast
cellular_component GO:0009941 chloroplast envelope
cellular_component GO:0009570 chloroplast stroma
cellular_component GO:0009535 chloroplast thylakoid membrane
cellular_component GO:0009295 nucleoid
cellular_component GO:0005730 nucleolus
cellular_component GO:0005840 ribosome
cellular_component GO:0005622 intracellular
cellular_component GO:0009507 chloroplast
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
molecular_function GO:0003746 translation elongation factor activity
This gene is associated with the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
CU102250cucumber EST collection version 3.0transcribed_cluster
CU107357cucumber EST collection version 3.0transcribed_cluster
CU150471cucumber EST collection version 3.0transcribed_cluster
CU166470cucumber EST collection version 3.0transcribed_cluster
CU174248cucumber EST collection version 3.0transcribed_cluster

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csa1G003540.1Csa1G003540.1mRNA


The following transcribed_cluster feature(s) are associated with this gene:

Feature NameUnique NameType
CU107357CU107357transcribed_cluster
CU166470CU166470transcribed_cluster
CU174248CU174248transcribed_cluster
CU150471CU150471transcribed_cluster
CU102250CU102250transcribed_cluster


Analysis Name: InterPro Annotations of cucumber (Chinese Long)
Date Performed: 2016-09-28
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004160Translation elongation factor EFTu/EF1A, C-terminalPFAMPF03143GTP_EFTU_D3coord: 307..406
score: 3.4
IPR004161Translation elongation factor EFTu-like, domain 2PFAMPF03144GTP_EFTU_D2coord: 234..302
score: 1.5
IPR004541Translation elongation factor EFTu/EF1A, bacterial/organelleTIGRFAMsTIGR00485TIGR00485coord: 101..408
score: 8.7E
IPR009000Translation protein, beta-barrel domainunknownSSF50447Translation proteinscoord: 214..310
score: 2.36
IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalunknownSSF50465EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domaincoord: 307..407
score: 3.36
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 99..220
score: 1.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 83..228
score: 8.19
NoneNo IPR availableGENE3DG3DSA:2.40.30.10coord: 221..307
score: 2.4E-37coord: 309..407
score: 3.9
NoneNo IPR availablePANTHERPTHR23115TRANSLATION FACTORcoord: 72..407
score: 2.5E
NoneNo IPR availablePANTHERPTHR23115:SF146SUBFAMILY NOT NAMEDcoord: 72..407
score: 2.5E
NoneNo IPR availablePFAMPF00009GTP_EFTUcoord: 98..210
score: 6.1

The following gene(s) are paralogous to this gene:

None