CsGy7G018250 (gene) Cucumber (Gy14) v2

NameCsGy7G018250
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
Descriptionnudix hydrolase 3-like isoform X2
LocationChr7 : 21341947 .. 21344491 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
TGTTCATGTGTGGATTTTTGCTGAGAGTACACAGGAATTACTTCTTCAACTACGCAGTGTCAGCAACAGTAAGGAATCGTGGCCTGGGTTATGGAATATATCTACTGCCAGTCAAATAGCTGCTGGGGACTCATCACTTGTGACTGCTAGGTAACATTATTTGATTATTAATTGTCTTTATTTTTCACCTCACTGATCTGCTTTGACAGTATGCCACCATTTGTTGGTTCTAGATTGCTTTCTCACTCATTTGCTATGGAAAGAATATGAAAGGAATTTATATGTATTTATTTCAGGAGGAAGCTTCAAAAAGAGCTTGGAGTTATTCTTCCAAAGGATGCATTTGAAATGATATTCGATTTTCTTCCTGAAACGTTGGTGAATCGTTCCAAGTAACCATAATATTTTTAGGCGTTGCATATATGATTTGGTTTTTTATATCCTTTCCTCCGTGATTAGTTTTTTTAGTTACTATCTGATTTTGGTTTCTGAAAATAAACATTATCCGTTTCTAAAGTCATGGTTTGGAACTTGGAAAAACCACATTGCCCCATTCCGAAATTCCAGCTCACTTAAGATCCATCGTTTAAGAATGCGATCTTACCTTGGTTTTAAGCTTTTCAGGATTATGCAAGACATTTGTTTCCTTGAAGATTAGCTCATGTTTCCTCTCAAGCCCTGTTCTGCTCCTCTTGAAAGTCATTTTCGATTTTGAAAGTTGTTTTTGTCTTGATTTTGGGGTGTTTTTGTAATGTTGTTGAATTTGTTTATTGTCATCTGTTTGTTTAACTCGGATTTAACTTCTTCAGTTTTGGGGTAGCTCTTTTGTTTTCGTTCTTGGAACCATTATTCGGTTTTTAGTTGTCTCTTTGTCATCTTATTATAATCGTCCTTTTATTTCATTATATCAATGAAAAACTCTGTTTCCCTTTTAAAAAAAACTTCGAATCTCATCTTTTCTTATGAAGAGAAGTTTAAGATTGCATTTAGAACTATAGGCACTTTATTAAAACAATTATAAGGTTTTCATCCTCTTGATTTTTTGGCTTAATCTTCTCTATTTCATTGATTCATCAACAAACAGTATCCATATTCATCCTCAATCTGCAGTATTTTCAGGTCTGAATCAACTCTTTTAGCCATATAAATATATAATTGAGGACATCTTTAAATGCTATCCAACAATATTTAAAAGATAATGTCTGTGACTTTTTATCTTGCATGGTAGGAATCGAATATCATACAACATGGCATCTTTTAAAATGGTACTGTGCTGGGTATACGTTGGCACATTATATTAGTGGTTCAATTCTAATTTGGTTTTTTTTTTTAACATAGAAACGATATACCTGTACCTGTGTTGTATTGTCTGTTATTTCTTCTGAGTTAGCTTTGGATTGATATACAGTGTCCGCATCACAAATGGTGACAAATTTAAGACGGATGTTTATTTGGTAACAACATTGGATCCAATTCCTTTGGAGGCGTTTACTCTTCAGGTTGGTGGTTAATCGTCTATTCTGTCATTTAATCCAAGCTAGATGTATGAATCCCACCCCGATGTAAATGTATGATATTTGAACTTCTAAATTTTTTGCAAGGGCCGTGAGGTGGAAAGGTAGTAGAGAGAACCAATATGTGCTTAGGTTTAGTTAAAGTGTTGATATAACATTAACTTTGCCATCACCAATTAGCTTAAGCTTATGGTTCAATTAGTGGTGATTAGCTTAAGCTTATGGTTCAATTAATAATTTAACACGGTATGAGAGAAGAGGTCTTGCCAAGCTCCTACAATATTATTTCTTCCTCGATTAATTTTGTTTTCCACTTGATAAGTCTTTTACAAATTTCCAAACCTCTACAAGCGATGGTATGGGTGAATTGGATTGCTATCATTAGATGCCCCTCCCACATTTATCAGCTCTTGGTAGGATACCATGGATGTGCTTTGAGCCTTTGACTTTGATAATGGACGTGAGATCAAAGAGAAAGGTGTAGATAGAAAAGTTTGGGTAACAGAAATTTAACCATTAGATCTTTGACATGTTGCTTTGTAGGTGCTTTTTATAATTTTATCGATTCATTTTTGTTAAAAGATTCATAATATTCAACCACATTGGCTGGTCTAGCGATAAAACGAATAGTAAAAGCCTATCTGAATTTTAATATTCTAGAATTTTCCCTTGAATACCAAATGGAGTATAGTCAATCAGTTGTCCCATAGAAAAAGGAAAATTTAGAAGTATATGTATATTATATGTTTGCATGTCTTGTTGCTTCTCTTCGGTCCATGCTTAAACTTGTATTGCACTTAAATGAATTTTGTGCTTAAAACAGTACAGGCCAGAATGCATTAGAAACTGAACTTGCATGAGACATTGAATTTATATTTTTTTGTTTAAATTTGATGTAGGAATCAGAAGTTTCTGCTGTTAAATATATACATTATCTGAAGTATAAGAGCTTACTTGGAAGTCAAAATTCTGAGTATGTCCCATATGATGTAGATGGGCAATATGGTCAACTTTTTGACATACTTACACAA

mRNA sequence

TGTTCATGTGTGGATTTTTGCTGAGAGTACACAGGAATTACTTCTTCAACTACGCAGTGTCAGCAACAGTAAGGAATCGTGGCCTGGGTTATGGAATATATCTACTGCCAGTCAAATAGCTGCTGGGGACTCATCACTTGTGACTGCTAGGAGGAAGCTTCAAAAAGAGCTTGGAGTTATTCTTCCAAAGGATGCATTTGAAATGATATTCGATTTTCTTCCTGAAACGTTGGTGAATCGTTCCAATGTCCGCATCACAAATGGTGACAAATTTAAGACGGATGTTTATTTGGTAACAACATTGGATCCAATTCCTTTGGAGGCGTTTACTCTTCAGGAATCAGAAGTTTCTGCTGTTAAATATATACATTATCTGAAGTATAAGAGCTTACTTGGAAGTCAAAATTCTGAGTATGTCCCATATGATGTAGATGGGCAATATGGTCAACTTTTTGACATACTTACACAA

Coding sequence (CDS)

ATGATATTCGATTTTCTTCCTGAAACGTTGGTGAATCGTTCCAATGTCCGCATCACAAATGGTGACAAATTTAAGACGGATGTTTATTTGGTAACAACATTGGATCCAATTCCTTTGGAGGCGTTTACTCTTCAGGAATCAGAAGTTTCTGCTGTTAAATATATACATTATCTGAAGTATAAGAGCTTACTTGGAAGTCAAAATTCTGAGTATGTCCCATATGATGTAGATGGGCAATATGGTCAACTTTTTGACATACTTACACAA

Protein sequence

MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKYKSLLGSQNSEYVPYDVDGQYGQLFDILTQ
BLAST of CsGy7G018250 vs. NCBI nr
Match: XP_011659491.1 (PREDICTED: nudix hydrolase 3 [Cucumis sativus])

HSP 1 Score: 181.4 bits (459), Expect = 1.3e-42
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 60
           MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY
Sbjct: 91  MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 150

Query: 61  KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           KSLLGSQNSEYVPYDVDGQYGQLFDILTQ
Sbjct: 151 KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 179

BLAST of CsGy7G018250 vs. NCBI nr
Match: KGN45205.1 (hypothetical protein Csa_7G431370 [Cucumis sativus])

HSP 1 Score: 163.3 bits (412), Expect = 3.8e-37
Identity = 83/89 (93.26%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 60
           MIFDFLPET      VRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY
Sbjct: 91  MIFDFLPET------VRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 150

Query: 61  KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           KSLLGSQNSEYVPYDVDGQYGQLFDILTQ
Sbjct: 151 KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 173

BLAST of CsGy7G018250 vs. NCBI nr
Match: XP_008461196.1 (PREDICTED: nudix hydrolase 3-like isoform X1 [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 9.3e-36
Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 60
           MIFD L ETL N SNVRITNG+K  TDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY
Sbjct: 107 MIFDSLRETLANNSNVRITNGEKI-TDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 166

Query: 61  KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           K+LLGSQNSEYVPYDVDGQYGQLFDI+TQ
Sbjct: 167 KTLLGSQNSEYVPYDVDGQYGQLFDIITQ 194

BLAST of CsGy7G018250 vs. NCBI nr
Match: XP_008461198.1 (PREDICTED: nudix hydrolase 3-like isoform X2 [Cucumis melo])

HSP 1 Score: 158.7 bits (400), Expect = 9.3e-36
Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 60
           MIFD L ETL N SNVRITNG+K  TDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY
Sbjct: 91  MIFDSLRETLANNSNVRITNGEKI-TDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 150

Query: 61  KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           K+LLGSQNSEYVPYDVDGQYGQLFDI+TQ
Sbjct: 151 KTLLGSQNSEYVPYDVDGQYGQLFDIITQ 178

BLAST of CsGy7G018250 vs. NCBI nr
Match: XP_022991361.1 (nudix hydrolase 3 isoform X3 [Cucurbita maxima])

HSP 1 Score: 129.8 bits (325), Expect = 4.6e-27
Identity = 70/93 (75.27%), Postives = 78/93 (83.87%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKT----DVYLVTTLDPIPLEAFTLQESEVSAVKYIH 60
           MIF FL ETLV+RSN  ITN  +F      DVYLVTTLDPIPLEAFTLQESEVSAVKYIH
Sbjct: 82  MIFVFLHETLVDRSN--ITNCGQFINNEFEDVYLVTTLDPIPLEAFTLQESEVSAVKYIH 141

Query: 61  YLKYKSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           YL+YKSLL +++  YVPYDV+GQYGQLFDI+TQ
Sbjct: 142 YLEYKSLLANEDPGYVPYDVNGQYGQLFDIITQ 172

BLAST of CsGy7G018250 vs. TAIR10
Match: AT1G79690.1 (nudix hydrolase homolog 3)

HSP 1 Score: 92.4 bits (228), Expect = 1.5e-19
Identity = 50/92 (54.35%), Postives = 62/92 (67.39%), Query Frame = 0

Query: 2   IFDFLPETLVNRSNVRITNGDKF----KTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHY 61
           IF FL E         +TN  KF      DVYLVT L PIPLEAFTLQ+ EVSAVKY+ Y
Sbjct: 101 IFVFLQEC--------VTNDGKFINNEFNDVYLVTILHPIPLEAFTLQKEEVSAVKYVPY 160

Query: 62  LKYKSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
            +Y++ L  ++  YVPYDV+G+YG+LFDI+ Q
Sbjct: 161 EEYRNFLSKEDPAYVPYDVNGEYGKLFDIIRQ 184

BLAST of CsGy7G018250 vs. Swiss-Prot
Match: sp|Q8L831|NUDT3_ARATH (Nudix hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=NUDT3 PE=1 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.7e-18
Identity = 50/92 (54.35%), Postives = 62/92 (67.39%), Query Frame = 0

Query: 2   IFDFLPETLVNRSNVRITNGDKF----KTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHY 61
           IF FL E         +TN  KF      DVYLVT L PIPLEAFTLQ+ EVSAVKY+ Y
Sbjct: 101 IFVFLQEC--------VTNDGKFINNEFNDVYLVTILHPIPLEAFTLQKEEVSAVKYVPY 160

Query: 62  LKYKSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
            +Y++ L  ++  YVPYDV+G+YG+LFDI+ Q
Sbjct: 161 EEYRNFLSKEDPAYVPYDVNGEYGKLFDIIRQ 184

BLAST of CsGy7G018250 vs. TrEMBL
Match: tr|A0A0A0K671|A0A0A0K671_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431370 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.5e-37
Identity = 83/89 (93.26%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 60
           MIFDFLPET      VRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY
Sbjct: 91  MIFDFLPET------VRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 150

Query: 61  KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           KSLLGSQNSEYVPYDVDGQYGQLFDILTQ
Sbjct: 151 KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 173

BLAST of CsGy7G018250 vs. TrEMBL
Match: tr|A0A1S3CE51|A0A1S3CE51_CUCME (nudix hydrolase 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499853 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.1e-36
Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 60
           MIFD L ETL N SNVRITNG+K  TDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY
Sbjct: 107 MIFDSLRETLANNSNVRITNGEKI-TDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 166

Query: 61  KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           K+LLGSQNSEYVPYDVDGQYGQLFDI+TQ
Sbjct: 167 KTLLGSQNSEYVPYDVDGQYGQLFDIITQ 194

BLAST of CsGy7G018250 vs. TrEMBL
Match: tr|A0A1S3CE65|A0A1S3CE65_CUCME (nudix hydrolase 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499853 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 6.1e-36
Identity = 80/89 (89.89%), Postives = 83/89 (93.26%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 60
           MIFD L ETL N SNVRITNG+K  TDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY
Sbjct: 91  MIFDSLRETLANNSNVRITNGEKI-TDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 150

Query: 61  KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           K+LLGSQNSEYVPYDVDGQYGQLFDI+TQ
Sbjct: 151 KTLLGSQNSEYVPYDVDGQYGQLFDIITQ 178

BLAST of CsGy7G018250 vs. TrEMBL
Match: tr|A0A1S3CFD2|A0A1S3CFD2_CUCME (nudix hydrolase 3-like OS=Cucumis melo OX=3656 GN=LOC103499855 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.0e-23
Identity = 62/93 (66.67%), Postives = 71/93 (76.34%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFK----TDVYLVTTLDPIPLEAFTLQESEVSAVKYIH 60
           +IF FL ET        ITNG +F      DVYLVTTLDPIPLEAFTLQESEVSAVKY+H
Sbjct: 105 LIFVFLQET--------ITNGGQFVDNEFADVYLVTTLDPIPLEAFTLQESEVSAVKYVH 164

Query: 61  YLKYKSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           YL+YKSLL +Q+ EY PYDV+ QYGQLFDI+ +
Sbjct: 165 YLEYKSLLANQDPEYFPYDVNAQYGQLFDIIAK 189

BLAST of CsGy7G018250 vs. TrEMBL
Match: tr|A0A218XB10|A0A218XB10_PUNGR (Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr007927 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 6.6e-22
Identity = 60/89 (67.42%), Postives = 71/89 (79.78%), Query Frame = 0

Query: 1   MIFDFLPETLVNRSNVRITNGDKFKTDVYLVTTLDPIPLEAFTLQESEVSAVKYIHYLKY 60
           +IF FL E  +N S   I N  +F ++VYLVTTLDPIPLEAFTLQESEVSAVKY+HY +Y
Sbjct: 108 LIFVFLQECTIN-SGTYINN--EF-SEVYLVTTLDPIPLEAFTLQESEVSAVKYLHYNQY 167

Query: 61  KSLLGSQNSEYVPYDVDGQYGQLFDILTQ 90
           +SLL  ++ EYVPYDVDGQYGQLF I+ Q
Sbjct: 168 RSLLAKEDPEYVPYDVDGQYGQLFGIIEQ 192

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011659491.11.3e-42100.00PREDICTED: nudix hydrolase 3 [Cucumis sativus][more]
KGN45205.13.8e-3793.26hypothetical protein Csa_7G431370 [Cucumis sativus][more]
XP_008461196.19.3e-3689.89PREDICTED: nudix hydrolase 3-like isoform X1 [Cucumis melo][more]
XP_008461198.19.3e-3689.89PREDICTED: nudix hydrolase 3-like isoform X2 [Cucumis melo][more]
XP_022991361.14.6e-2775.27nudix hydrolase 3 isoform X3 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
AT1G79690.11.5e-1954.35nudix hydrolase homolog 3[more]
Match NameE-valueIdentityDescription
sp|Q8L831|NUDT3_ARATH2.7e-1854.35Nudix hydrolase 3 OS=Arabidopsis thaliana OX=3702 GN=NUDT3 PE=1 SV=1[more]
Match NameE-valueIdentityDescription
tr|A0A0A0K671|A0A0A0K671_CUCSA2.5e-3793.26Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G431370 PE=4 SV=1[more]
tr|A0A1S3CE51|A0A1S3CE51_CUCME6.1e-3689.89nudix hydrolase 3-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499853 PE=4 S... [more]
tr|A0A1S3CE65|A0A1S3CE65_CUCME6.1e-3689.89nudix hydrolase 3-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499853 PE=4 S... [more]
tr|A0A1S3CFD2|A0A1S3CFD2_CUCME2.0e-2366.67nudix hydrolase 3-like OS=Cucumis melo OX=3656 GN=LOC103499855 PE=4 SV=1[more]
tr|A0A218XB10|A0A218XB10_PUNGR6.6e-2267.42Uncharacterized protein OS=Punica granatum OX=22663 GN=CDL15_Pgr007927 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0016787 hydrolase activity

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G018250.1CsGy7G018250.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy7G018250Csa7G431370Cucumber (Chinese Long) v2cgybcuB323
CsGy7G018250MELO3C023479Melon (DHL92) v3.5.1cgybmeB457
CsGy7G018250CSPI07G19990Wild cucumber (PI 183967)cgybcpiB331
CsGy7G018250CsaV3_7G031770Cucumber (Chinese Long) v3cgybcucB347
The following gene(s) are paralogous to this gene:

None