CsGy7G016270 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G016270
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr7 : 19915771 .. 19916352 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAAGTTACAACTTTGCCCTCTTTCTACTCCGTCAGGCCGCTATCGTATGGAACGCCCGTCTGCGGCAACCAATCATCCGCCAACACAAAATTCCCAGCCGTGAAATTCCCAGCATCAGTATCATTAATCAAATGAAACCCCGCCCAGGTAACCCTCTCTGACGTGTTAGATCCCGGCCCAAAATTCCCAAATTCCGCATAATACGAAGTGTTTAAAGCAAAATCCCCATCCCAAGCTCTCCATCCCGCCGGATTAATCAAATCATCCATAAAGCTTTGCATATAAACTGTCCTCGAGTACTCCTTCCACGGCCGTCCCAGGAAAGTCTTCACGCCGGCGTCCCTGTTGTTCGCCAGATCGTCTGCCGCCGTGATTCGGCAATTGTAGATCGAGGTGCCGGTGTTCTGATTTGGGTCGGTCCGGCCTTGGGCGGTGATGGCGTTGAACTGGTTGGACATGGGAAGGCGTGGGTAAATGTTGCAGTTCTGGAAGACGACGGCGGCATTGCCGAAGATGAAGTCGACAGTGCCGTAGATGTCACAGTCGCGGTAGAATTGGCGGAGGGAATGAGTGTATAA

mRNA sequence

ATGCGAAGTTACAACTTTGCCCTCTTTCTACTCCGTCAGGCCGCTATCGTATGGAACGCCCGTCTGCGGCAACCAATCATCCGCCAACACAAAATTCCCAGCCGTGAAATTCCCAGCATCAGTATCATTAATCAAATGAAACCCCGCCCAGCTTTGCATATAAACTGTCCTCGAGTACTCCTTCCACGGCCGTCCCAGGAAAGTCTTCACGCCGGCGTCCCTGTTGTTCGCCAGATCGTCTGCCGCCGTGATTCGGCAATTGTAGATCGAGGTGCCGGTGTTCTGATTTGGGTCGGTCCGGCCTTGGGCGGTGATGGCGTTGAACTGGTTGGACATGGGAAGGCGTGGGTAAATGTTGCAGTTCTGGAAGACGACGGCGGCATTGCCGAAGATGAAGTCGACAGTGCCGTAGATGTCACAGTCGCGGTAGAATTGGCGGAGGGAATGAGTGTATAA

Coding sequence (CDS)

ATGCGAAGTTACAACTTTGCCCTCTTTCTACTCCGTCAGGCCGCTATCGTATGGAACGCCCGTCTGCGGCAACCAATCATCCGCCAACACAAAATTCCCAGCCGTGAAATTCCCAGCATCAGTATCATTAATCAAATGAAACCCCGCCCAGCTTTGCATATAAACTGTCCTCGAGTACTCCTTCCACGGCCGTCCCAGGAAAGTCTTCACGCCGGCGTCCCTGTTGTTCGCCAGATCGTCTGCCGCCGTGATTCGGCAATTGTAGATCGAGGTGCCGGTGTTCTGATTTGGGTCGGTCCGGCCTTGGGCGGTGATGGCGTTGAACTGGTTGGACATGGGAAGGCGTGGGTAAATGTTGCAGTTCTGGAAGACGACGGCGGCATTGCCGAAGATGAAGTCGACAGTGCCGTAGATGTCACAGTCGCGGTAGAATTGGCGGAGGGAATGAGTGTATAA

Protein sequence

MRSYNFALFLLRQAAIVWNARLRQPIIRQHKIPSREIPSISIINQMKPRPALHINCPRVLLPRPSQESLHAGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGDGVELVGHGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV

Homology

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BLAST of CsGy7G016270 vs. NCBI nr
Match: PON79340.1 (hypothetical protein TorRG33x02_236220, partial [Trema orientalis])

HSP 1 Score: 80.1 bits (196), Expect = 7.1e-12
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 52  LHINCPRVLLPRPSQESLH--------AGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALG 111
           LH+NC R+ LPRP +  L         +GV    Q+    D A++DR AGVL+ VG ALG
Sbjct: 61  LHVNCSRIFLPRPPEVGLRVRAVSGGSSGVG-RGQVGTGTDGAVLDRSAGVLVRVGSALG 120

Query: 112 GDGVELVGHGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV 152
             GVEL G  +  ++VAVLE++  +AE EV  AV+V  +VEL+ GMS+
Sbjct: 121 SYGVELAGERQPGIDVAVLENNSSVAEYEVHGAVNVAFSVELSLGMSI 167

[Close]

BLAST of CsGy7G016270 vs. NCBI nr
Match: PON63470.1 (LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_131340 [Parasponia andersonii])

HSP 1 Score: 77.4 bits (189), Expect = 4.6e-11
Identity = 47/106 (44.34%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 52  LHINCPRVLLPRPSQESLH------AGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGD 111
           LH+NC R+LLPRP Q  L           V  Q+    D A++DR A VL+ VG AL   
Sbjct: 49  LHVNCSRILLPRPPQVGLRVRAVSGGSSGVGGQVGTGTDGAVLDRSACVLVRVGSALSSY 108

Query: 112 GVELVGHGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV 152
           GVEL G  +  ++VAVL+++  +AE EV  AV+V  +VEL+ GMS+
Sbjct: 109 GVELAGERQPRIDVAVLDNNSSVAEYEVHGAVNVAFSVELSLGMSI 154

[Close]

BLAST of CsGy7G016270 vs. NCBI nr
Match: BAS71791.1 (Os01g0312600, partial [Oryza sativa Japonica Group])

HSP 1 Score: 75.1 bits (183), Expect = 2.3e-10
Identity = 50/100 (50.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 52  LHINCPRVLLPRPSQESLHAGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGDGVELVG 111
           LH +   VLLP  ++  L AG+    ++      A++D  AGVL+ V P L G  V LVG
Sbjct: 72  LHEHRAGVLLPGAAEVGLEAGLD-GEEVGGGGHLALLDGDAGVLVGVLPPLRGVDVALVG 131

Query: 112 HGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV 152
              A V VA LEDDGG+AEDEVD AVDV +A ELAEG+ V
Sbjct: 132 ERAARVEVAALEDDGGVAEDEVDGAVDVALAEELAEGVDV 170

[Close]

BLAST of CsGy7G016270 vs. NCBI nr
Match: EYU24969.1 (hypothetical protein MIMGU_mgv1a022106mg, partial [Erythranthe guttata])

HSP 1 Score: 72.0 bits (175), Expect = 1.9e-09
Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 57  PRVLLPRPSQ---ESLHAGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGDGVELVGHG 116
           PRV LPRP+Q   E    G  + R      D  IVDR  GVL+ VG +LGGD V L+ H 
Sbjct: 698 PRVQLPRPTQKGSERPENGYQIWRS----HDPGIVDRYPGVLVRVGSSLGGDDVLLLVHW 757

Query: 117 KAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELA 147
            A V+ AVL++ GG+A+DEVD AVDV   VELA
Sbjct: 758 AACVDHAVLQNGGGVAKDEVDGAVDVAFFVELA 786

[Close]

BLAST of CsGy7G016270 vs. NCBI nr
Match: RDX76578.1 (hypothetical protein CR513_43416, partial [Mucuna pruriens])

HSP 1 Score: 67.0 bits (162), Expect = 6.2e-08
Identity = 45/101 (44.55%), Postives = 61/101 (60.40%), Query Frame = 0


Query: 51  ALHINCPRVLLPRPSQESLHAGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGDGVELV 110
           ALH+N PRV+ PRPSQ      V V RQI+   + A++ R   VL+W+   L G GVEL 
Sbjct: 85  ALHVNRPRVVFPRPSQICC-CCVHVRRQIISCSNRAVLYRSPRVLVWICSPLCGYGVELP 144

Query: 111 GHGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV 152
            H +  V+VA LE    ++E E+  AV V  +VEL++GM V
Sbjct: 145 THWEPRVHVARLEHCRRVSEYEIHRAVYVAFSVELSQGMRV 184

[Close]

BLAST of CsGy7G016270 vs. TrEMBL
Match: tr|T1M318|T1M318_TRIUA (Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1)

HSP 1 Score: 83.6 bits (205), Expect = 4.2e-13
Identity = 54/100 (54.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 52  LHINCPRVLLPRPSQESLHAGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGDGVELVG 111
           LH +  RV LPRP Q        V  ++    D A +D GA VL+ VG AL  DGV L G
Sbjct: 61  LHDHRARVHLPRPPQVGGGGEGRVGGELRRGHDGAALDGGARVLVRVGAALRRDGVALAG 120

Query: 112 HGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV 152
           HG+A V  AVLE DGG+AED VD AVDV  AVELAEG+ V
Sbjct: 121 HGEAVVERAVLEHDGGVAEDVVDGAVDVARAVELAEGVGV 160

[Close]

BLAST of CsGy7G016270 vs. TrEMBL
Match: tr|A0A2P5E1B1|A0A2P5E1B1_9ROSA (Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_236220 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12
Identity = 49/108 (45.37%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 52  LHINCPRVLLPRPSQESLH--------AGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALG 111
           LH+NC R+ LPRP +  L         +GV    Q+    D A++DR AGVL+ VG ALG
Sbjct: 61  LHVNCSRIFLPRPPEVGLRVRAVSGGSSGVG-RGQVGTGTDGAVLDRSAGVLVRVGSALG 120

Query: 112 GDGVELVGHGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV 152
             GVEL G  +  ++VAVLE++  +AE EV  AV+V  +VEL+ GMS+
Sbjct: 121 SYGVELAGERQPGIDVAVLENNSSVAEYEVHGAVNVAFSVELSLGMSI 167

[Close]

BLAST of CsGy7G016270 vs. TrEMBL
Match: tr|A0A2P5CQY7|A0A2P5CQY7_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_131340 PE=4 SV=1)

HSP 1 Score: 77.4 bits (189), Expect = 3.0e-11
Identity = 47/106 (44.34%), Postives = 64/106 (60.38%), Query Frame = 0


Query: 52  LHINCPRVLLPRPSQESLH------AGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGD 111
           LH+NC R+LLPRP Q  L           V  Q+    D A++DR A VL+ VG AL   
Sbjct: 49  LHVNCSRILLPRPPQVGLRVRAVSGGSSGVGGQVGTGTDGAVLDRSACVLVRVGSALSSY 108

Query: 112 GVELVGHGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV 152
           GVEL G  +  ++VAVL+++  +AE EV  AV+V  +VEL+ GMS+
Sbjct: 109 GVELAGERQPRIDVAVLDNNSSVAEYEVHGAVNVAFSVELSLGMSI 154

[Close]

BLAST of CsGy7G016270 vs. TrEMBL
Match: tr|A0A0P0V1P5|A0A0P0V1P5_ORYSJ (Os01g0312600 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0312600 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.5e-10
Identity = 50/100 (50.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 52  LHINCPRVLLPRPSQESLHAGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGDGVELVG 111
           LH +   VLLP  ++  L AG+    ++      A++D  AGVL+ V P L G  V LVG
Sbjct: 72  LHEHRAGVLLPGAAEVGLEAGLD-GEEVGGGGHLALLDGDAGVLVGVLPPLRGVDVALVG 131

Query: 112 HGKAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELAEGMSV 152
              A V VA LEDDGG+AEDEVD AVDV +A ELAEG+ V
Sbjct: 132 ERAARVEVAALEDDGGVAEDEVDGAVDVALAEELAEGVDV 170

[Close]

BLAST of CsGy7G016270 vs. TrEMBL
Match: tr|A0A022QBJ4|A0A022QBJ4_ERYGU (Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a022106mg PE=4 SV=1)

HSP 1 Score: 72.0 bits (175), Expect = 1.3e-09
Identity = 48/93 (51.61%), Postives = 58/93 (62.37%), Query Frame = 0


Query: 57  PRVLLPRPSQ---ESLHAGVPVVRQIVCRRDSAIVDRGAGVLIWVGPALGGDGVELVGHG 116
           PRV LPRP+Q   E    G  + R      D  IVDR  GVL+ VG +LGGD V L+ H 
Sbjct: 698 PRVQLPRPTQKGSERPENGYQIWRS----HDPGIVDRYPGVLVRVGSSLGGDDVLLLVHW 757

Query: 117 KAWVNVAVLEDDGGIAEDEVDSAVDVTVAVELA 147
            A V+ AVL++ GG+A+DEVD AVDV   VELA
Sbjct: 758 AACVDHAVLQNGGGVAKDEVDGAVDVAFFVELA 786

The following BLAST results are available for this feature:

BLAST of CsGy7G016270 vs. NCBI nr


Match Name	E-value	Identity	Description
PON79340.1	7.1e-12	45.37	hypothetical protein TorRG33x02_236220, partial [Trema orientalis]	[more]
PON63470.1	4.6e-11	44.34	LOW QUALITY PROTEIN: hypothetical protein PanWU01x14_131340 [Parasponia anderson...	[more]
BAS71791.1	2.3e-10	50.00	Os01g0312600, partial [Oryza sativa Japonica Group]	[more]
EYU24969.1	1.9e-09	51.61	hypothetical protein MIMGU_mgv1a022106mg, partial [Erythranthe guttata]	[more]
RDX76578.1	6.2e-08	44.55	hypothetical protein CR513_43416, partial [Mucuna pruriens]	[more]

BLAST of CsGy7G016270 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy7G016270 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G016270 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|T1M318\|T1M318_TRIUA	4.2e-13	54.00	Uncharacterized protein OS=Triticum urartu OX=4572 PE=4 SV=1	[more]
tr\|A0A2P5E1B1\|A0A2P5E1B1_9ROSA	4.7e-12	45.37	Uncharacterized protein (Fragment) OS=Trema orientalis OX=63057 GN=TorRG33x02_23...	[more]
tr\|A0A2P5CQY7\|A0A2P5CQY7_PARAD	3.0e-11	44.34	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_131340 PE...	[more]
tr\|A0A0P0V1P5\|A0A0P0V1P5_ORYSJ	1.5e-10	50.00	Os01g0312600 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os01...	[more]
tr\|A0A022QBJ4\|A0A022QBJ4_ERYGU	1.3e-09	51.61	Uncharacterized protein (Fragment) OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0065007	biological regulation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G016270.1	CsGy7G016270.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G016270	Cucumber (Gy14) v2	cgybcgybB134
CsGy7G016270	Cucurbita maxima (Rimu)	cgybcmaB925
CsGy7G016270	Cucurbita maxima (Rimu)	cgybcmaB973
CsGy7G016270	Cucurbita moschata (Rifu)	cgybcmoB909
CsGy7G016270	Cucurbita moschata (Rifu)	cgybcmoB955
CsGy7G016270	Cucurbita pepo (Zucchini)	cgybcpeB906
CsGy7G016270	Cucurbita pepo (Zucchini)	cgybcpeB931
CsGy7G016270	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G016270	Bottle gourd (USVL1VR-Ls)	cgyblsiB472
CsGy7G016270	Melon (DHL92) v3.5.1	cgybmeB470
CsGy7G016270	Melon (DHL92) v3.5.1	cgybmeB501
CsGy7G016270	Melon (DHL92) v3.6.1	cgybmedB467
CsGy7G016270	Melon (DHL92) v3.6.1	cgybmedB497
CsGy7G016270	Watermelon (Charleston Gray)	cgybwcgB486
CsGy7G016270	Watermelon (Charleston Gray)	cgybwcgB492
CsGy7G016270	Watermelon (97103) v1	cgybwmB537
CsGy7G016270	Watermelon (97103) v1	cgybwmB530
CsGy7G016270	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G016270	Silver-seed gourd	carcgybB0120
CsGy7G016270	Silver-seed gourd	carcgybB0569
CsGy7G016270	Silver-seed gourd	carcgybB0807
CsGy7G016270	Cucumber (Chinese Long) v3	cgybcucB336
CsGy7G016270	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G016270	Watermelon (97103) v2	cgybwmbB490
CsGy7G016270	Watermelon (97103) v2	cgybwmbB543
CsGy7G016270	Wax gourd	cgybwgoB618
CsGy7G016270	Wax gourd	cgybwgoB626
CsGy7G016270	Wax gourd	cgybwgoB660