CsGy7G016170 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G016170
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr7 : 19851601 .. 19852344 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAATGGCTAGAGGCTTTAAGCTCTTTCAAACTCTTTGCTTGGTGTTTGCTTGGAAATATTGTTGTGCACAAGTAGGTGCCACTTTTAGCGATGCTACCGGTGTCGTAAATGCCGGCCTCAATCATCAATTTTCATTTCGTGCATTCGGATGGCCTCATATTGGAACTCCGGATGTCGATGGTAGCATCACATCAACCGTAAAAAAACAAATACATGCAGAAGCACCAGCAGGCATTGCTCCTGTTGGGCTTGAAACTATGATCAACAAAGAGGACAAAGTTCAATCTTATGATCTTGATATTATTAAGCAGATCAAAGGTGGCGGCGCCGTTGTTTCTCATGATCATGAAAGTAATTTGAACAGTGGTGAGAATATTGCATTTTCTCATGGTGGAAAAGTTATTGTAAAGAGCAAAGGTAGTGTTGCTGGTTCAAGTGGTGGTACAATTAATGGTATGAAGAGGAAGATTCATAATTACAAAGGTTTGTCTTTTGGTGTTGAAATTAAAAAGGACCATGGTGCAACTCTTGGTCTCAAAGCTCACAAGGGAAAGGTTAATGTTGGTGTTTCTCATGGTGGTAATATTAGTATAAACAAGAGAGGTAGTATTGTCATCTAAGGGTGCCAAGTTTGGTTAGGAGAGCAACTGTCAATGTTGTTTTTTTTCATGGCCTTGGAGATCATGATCCAATTTAACCTCACAATATTTTGTCAAGGGCCAAGGCAATTGAATGAATAA

mRNA sequence

ATGGAAATGGCTAGAGGCTTTAAGCTCTTTCAAACTCTTTGCTTGGTGTTTGCTTGGAAATATTGTTGTGCACAAGTAGGTGCCACTTTTAGCGATGCTACCGGTGTCGTAAATGCCGGCCTCAATCATCAATTTTCATTTCGTGCATTCGGATGGCCTCATATTGGAACTCCGGATGTCGATGGTAGCATCACATCAACCGTAAAAAAACAAATACATGCAGAAGCACCAGCAGGCATTGCTCCTGTTGGGCTTGAAACTATGATCAACAAAGAGGACAAAGTTCAATCTTATGATCTTGATATTATTAAGCAGATCAAAGGTGGCGGCGCCGTTGTTTCTCATGATCATGAAAGGCCAAGGCAATTGAATGAATAA

Coding sequence (CDS)

ATGGAAATGGCTAGAGGCTTTAAGCTCTTTCAAACTCTTTGCTTGGTGTTTGCTTGGAAATATTGTTGTGCACAAGTAGGTGCCACTTTTAGCGATGCTACCGGTGTCGTAAATGCCGGCCTCAATCATCAATTTTCATTTCGTGCATTCGGATGGCCTCATATTGGAACTCCGGATGTCGATGGTAGCATCACATCAACCGTAAAAAAACAAATACATGCAGAAGCACCAGCAGGCATTGCTCCTGTTGGGCTTGAAACTATGATCAACAAAGAGGACAAAGTTCAATCTTATGATCTTGATATTATTAAGCAGATCAAAGGTGGCGGCGCCGTTGTTTCTCATGATCATGAAAGGCCAAGGCAATTGAATGAATAA

Protein sequence

MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDVDGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHERPRQLNE

Homology

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BLAST of CsGy7G016170 vs. NCBI nr
Match: KGN44969.1 (hypothetical protein Csa_7G399280 [Cucumis sativus])

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV 60
           MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV
Sbjct: 1   MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV 60

Query: 61  DGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 119
           DGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHE
Sbjct: 61  DGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 118

[Close]

BLAST of CsGy7G016170 vs. NCBI nr
Match: KGN44966.1 (hypothetical protein Csa_7G398760 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 2.9e-43
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 28  ATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDVDGSITSTVKKQIHAEAPAGIAPVGLET 87
           ATFSDATGVVNAGLNHQFSFRAFGWPHIGTP+VDGSITSTV+KQI AEAPAGIAPVGLET
Sbjct: 7   ATFSDATGVVNAGLNHQFSFRAFGWPHIGTPNVDGSITSTVEKQIRAEAPAGIAPVGLET 66

Query: 88  MINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 119
           MINKEDKVQSYDLDIIKQIKGGGAVVSHDHE
Sbjct: 67  MINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 97

[Close]

BLAST of CsGy7G016170 vs. NCBI nr
Match: KGN44965.1 (hypothetical protein Csa_7G398750 [Cucumis sativus])

HSP 1 Score: 157.9 bits (398), Expect = 2.2e-35
Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 3   MARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDVDG 62
           MARGFKLFQTL LVFAW++ C +V ATF+D TGVVN  LNH FSFR FGWP IGTP+ DG
Sbjct: 1   MARGFKLFQTLFLVFAWQH-CVKVDATFNDVTGVVNLDLNHHFSFRGFGWPRIGTPNTDG 60

Query: 63  SITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 119
           S+ STV    HAEAP GIAPVGL+T INK DKV ++ L+IIKQI+  G VVS DHE
Sbjct: 61  SLASTVNN--HAEAPTGIAPVGLDTPINKGDKVSTFGLEIIKQIE-SGVVVSKDHE 112

[Close]

BLAST of CsGy7G016170 vs. NCBI nr
Match: XP_022960412.1 (uncharacterized protein LOC111461146 [Cucurbita moschata])

HSP 1 Score: 73.2 bits (178), Expect = 7.2e-10
Identity = 43/121 (35.54%), Postives = 62/121 (51.24%), Query Frame = 0


Query: 1   MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV 60
           M   RGF +   L LV AW+ CCA++GATF+D TGV+  G NH+FSFR+FG  HIG    
Sbjct: 1   MAAVRGFNIVHALFLVLAWE-CCARLGATFNDVTGVIGKGRNHRFSFRSFGDHHIGISKF 60

Query: 61  DGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHERP 120
           D +   + +  +  +A +    +       K+D       ++ K   GGG    H+  R 
Sbjct: 61  DHTAIQSPEVSVDDKASSFRNEI-------KKDGAGFVGREVPKINGGGGFSKGHEIIRK 113

Query: 121 R 122
           R
Sbjct: 121 R 113

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BLAST of CsGy7G016170 vs. NCBI nr
Match: XP_022925496.1 (uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_022925497.1 uncharacterized protein LOC111432782 isoform X2 [Cucurbita moschata])

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-09
Identity = 38/67 (56.72%), Postives = 45/67 (67.16%), Query Frame = 0


Query: 1  MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV 60
          M M +GFKLF TL LV AW+Y C +VGAT+ D TGVV   L+HQFSFRAFG     TP +
Sbjct: 1  MAMGKGFKLFHTLFLVVAWQY-CVKVGATYGDVTGVVK--LDHQFSFRAFGSHDTQTPAI 60

Query: 61 DGSITST 68
              +ST
Sbjct: 61 APIASST 64

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BLAST of CsGy7G016170 vs. TrEMBL
Match: tr|A0A0A0K7W7|A0A0A0K7W7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 8.3e-63
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0


Query: 1   MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV 60
           MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV
Sbjct: 1   MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV 60

Query: 61  DGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 119
           DGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHE
Sbjct: 61  DGSITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 118

[Close]

BLAST of CsGy7G016170 vs. TrEMBL
Match: tr|A0A0A0KAZ8|A0A0A0KAZ8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398760 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.9e-43
Identity = 88/91 (96.70%), Postives = 90/91 (98.90%), Query Frame = 0


Query: 28  ATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDVDGSITSTVKKQIHAEAPAGIAPVGLET 87
           ATFSDATGVVNAGLNHQFSFRAFGWPHIGTP+VDGSITSTV+KQI AEAPAGIAPVGLET
Sbjct: 7   ATFSDATGVVNAGLNHQFSFRAFGWPHIGTPNVDGSITSTVEKQIRAEAPAGIAPVGLET 66

Query: 88  MINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 119
           MINKEDKVQSYDLDIIKQIKGGGAVVSHDHE
Sbjct: 67  MINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 97

[Close]

BLAST of CsGy7G016170 vs. TrEMBL
Match: tr|A0A0A0K5J0|A0A0A0K5J0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 80/116 (68.97%), Postives = 91/116 (78.45%), Query Frame = 0


Query: 3   MARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDVDG 62
           MARGFKLFQTL LVFAW++ C +V ATF+D TGVVN  LNH FSFR FGWP IGTP+ DG
Sbjct: 1   MARGFKLFQTLFLVFAWQH-CVKVDATFNDVTGVVNLDLNHHFSFRGFGWPRIGTPNTDG 60

Query: 63  SITSTVKKQIHAEAPAGIAPVGLETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHE 119
           S+ STV    HAEAP GIAPVGL+T INK DKV ++ L+IIKQI+  G VVS DHE
Sbjct: 61  SLASTVNN--HAEAPTGIAPVGLDTPINKGDKVSTFGLEIIKQIE-SGVVVSKDHE 112

[Close]

BLAST of CsGy7G016170 vs. TrEMBL
Match: tr|A0A0A0K5G8|A0A0A0K5G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398120 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 7.6e-08
Identity = 45/110 (40.91%), Postives = 56/110 (50.91%), Query Frame = 0


Query: 1   MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDV 60
           M +A G KLF T+ L+ AW+Y CA+V ATF D TG  +  L    SF + G   +G    
Sbjct: 1   MSIAIGSKLFHTVLLMLAWQY-CAKVDATFKDVTGFFDFNLG---SFGSGGAGIMGGTKN 60

Query: 61  DGSITSTVKKQIHAEAPAGIAPVGLETMINKEDK-VQSYDLDIIKQIKGG 110
            GS  +        E   GIAPVG +T  N ED    S+D D  K I GG
Sbjct: 61  GGSPANA------PEMAPGIAPVGFDTPTNNEDSGASSFDFDFSKNINGG 100

[Close]

BLAST of CsGy7G016170 vs. TrEMBL
Match: tr|A0A0A0KB06|A0A0A0KB06_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404790 PE=4 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.4e-07
Identity = 40/91 (43.96%), Postives = 50/91 (54.95%), Query Frame = 0


Query: 1  MEMARGFKLFQTLCLVFAWKYCCAQVGATFSDATGVVNAGLNHQFSF-RAFGWPHIGTPD 60
          M   +GF LF TL LV A   CC  VGATF D TG++  G++H++SF    G   +G   
Sbjct: 1  MATTQGFNLFHTLFLVLAC-LCCVNVGATFHDVTGILGLGIHHRYSFHNTIGSGGVGLFS 60

Query: 61 VDGSIT--STVKKQIHAEAPAG-IAPVGLET 88
            G  T  S V  +  A+AP   IAP GLET
Sbjct: 61 NTGGSTASSVVDIESPAQAPTSEIAPAGLET 90

The following BLAST results are available for this feature:

BLAST of CsGy7G016170 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN44969.1	1.2e-62	100.00	hypothetical protein Csa_7G399280 [Cucumis sativus]	[more]
KGN44966.1	2.9e-43	96.70	hypothetical protein Csa_7G398760 [Cucumis sativus]	[more]
KGN44965.1	2.2e-35	68.97	hypothetical protein Csa_7G398750 [Cucumis sativus]	[more]
XP_022960412.1	7.2e-10	35.54	uncharacterized protein LOC111461146 [Cucurbita moschata]	[more]
XP_022925496.1	3.6e-09	56.72	uncharacterized protein LOC111432782 isoform X1 [Cucurbita moschata] >XP_0229254...	[more]

BLAST of CsGy7G016170 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy7G016170 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G016170 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K7W7\|A0A0A0K7W7_CUCSA	8.3e-63	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1	[more]
tr\|A0A0A0KAZ8\|A0A0A0KAZ8_CUCSA	1.9e-43	96.70	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398760 PE=4 SV=1	[more]
tr\|A0A0A0K5J0\|A0A0A0K5J0_CUCSA	1.5e-35	68.97	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1	[more]
tr\|A0A0A0K5G8\|A0A0A0K5G8_CUCSA	7.6e-08	40.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398120 PE=4 SV=1	[more]
tr\|A0A0A0KB06\|A0A0A0KB06_CUCSA	6.4e-07	43.96	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G404790 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G016170.1	CsGy7G016170.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G016170	Cla015076	Watermelon (97103) v1	cgybwmB522
CsGy7G016170	ClCG09G005790	Watermelon (Charleston Gray)	cgybwcgB479

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G016170	Cucumber (Gy14) v2	cgybcgybB134
CsGy7G016170	Cucurbita maxima (Rimu)	cgybcmaB925
CsGy7G016170	Cucurbita maxima (Rimu)	cgybcmaB973
CsGy7G016170	Cucurbita moschata (Rifu)	cgybcmoB909
CsGy7G016170	Cucurbita moschata (Rifu)	cgybcmoB955
CsGy7G016170	Cucurbita pepo (Zucchini)	cgybcpeB906
CsGy7G016170	Cucurbita pepo (Zucchini)	cgybcpeB931
CsGy7G016170	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G016170	Bottle gourd (USVL1VR-Ls)	cgyblsiB472
CsGy7G016170	Melon (DHL92) v3.5.1	cgybmeB470
CsGy7G016170	Melon (DHL92) v3.5.1	cgybmeB501
CsGy7G016170	Melon (DHL92) v3.6.1	cgybmedB467
CsGy7G016170	Melon (DHL92) v3.6.1	cgybmedB497
CsGy7G016170	Watermelon (Charleston Gray)	cgybwcgB486
CsGy7G016170	Watermelon (Charleston Gray)	cgybwcgB492
CsGy7G016170	Watermelon (97103) v1	cgybwmB537
CsGy7G016170	Watermelon (97103) v1	cgybwmB530
CsGy7G016170	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G016170	Silver-seed gourd	carcgybB0120
CsGy7G016170	Silver-seed gourd	carcgybB0569
CsGy7G016170	Silver-seed gourd	carcgybB0807
CsGy7G016170	Cucumber (Chinese Long) v3	cgybcucB336
CsGy7G016170	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G016170	Watermelon (97103) v2	cgybwmbB490
CsGy7G016170	Watermelon (97103) v2	cgybwmbB536
CsGy7G016170	Watermelon (97103) v2	cgybwmbB543
CsGy7G016170	Wax gourd	cgybwgoB618
CsGy7G016170	Wax gourd	cgybwgoB626
CsGy7G016170	Wax gourd	cgybwgoB660