CsGy7G016150 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G016150
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Uncharacterized protein
Location	Chr7 : 19846922 .. 19847233 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAGTTCCTCTATCCCATCCGAAGCAAGAAGATATCACCAAATTTCTTTGGAAGATCTATGAGGTTACGGTGGTTCAAGTCATCGCCGACTTGGAGCCAGTTTCCAAATATCGAGACGAGTAAAGGACGGCGGAAGCTTGAAACGCTTGCCGTGAAGCTTGGAAATGGCGATGGAGAGAACGATGGCCATGAAGAGGCCGAGGAGAGTCTTCTCCAAGAGAAGGAGATCAATGGCGGAGGAGGAAGGGATTTGCATTGGAAGTTGAAATGTTGGGGTGTAGTTGGAAGTTCATCACTGTTTTATGTTTAG

mRNA sequence

ATGAAGTTCCTCTATCCCATCCGAAGCAAGAAGATATCACCAAATTTCTTTGGAAGATCTATGAGGTTACGGTGGTTCAAGTCATCGCCGACTTGGAGCCAGTTTCCAAATATCGAGACGAGTAAAGGACGGCGGAAGCTTGAAACGCTTGCCGTGAAGCTTGGAAATGGCGATGGAGAGAACGATGGCCATGAAGAGGCCGAGGAGAGTCTTCTCCAAGAGAAGGAGATCAATGGCGGAGGAGGAAGGGATTTGCATTGGAAGTTGAAATGTTGGGGTGTAGTTGGAAGTTCATCACTGTTTTATGTTTAG

Coding sequence (CDS)

ATGAAGTTCCTCTATCCCATCCGAAGCAAGAAGATATCACCAAATTTCTTTGGAAGATCTATGAGGTTACGGTGGTTCAAGTCATCGCCGACTTGGAGCCAGTTTCCAAATATCGAGACGAGTAAAGGACGGCGGAAGCTTGAAACGCTTGCCGTGAAGCTTGGAAATGGCGATGGAGAGAACGATGGCCATGAAGAGGCCGAGGAGAGTCTTCTCCAAGAGAAGGAGATCAATGGCGGAGGAGGAAGGGATTTGCATTGGAAGTTGAAATGTTGGGGTGTAGTTGGAAGTTCATCACTGTTTTATGTTTAG

Protein sequence

MKFLYPIRSKKISPNFFGRSMRLRWFKSSPTWSQFPNIETSKGRRKLETLAVKLGNGDGENDGHEEAEESLLQEKEINGGGGRDLHWKLKCWGVVGSSSLFYV

Homology

[Close]

BLAST of CsGy7G016150 vs. NCBI nr
Match: KYP72989.1 (hypothetical protein KK1_005597 [Cajanus cajan])

HSP 1 Score: 60.8 bits (146), Expect = 3.0e-06
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 2  KFLYPIRSKKISPNFFGRSMRLRWFKSSPTWSQFPNIETSKG 44
          +F  P+R +K+SPNF  RS+RLRW +SSPTWSQFP + T  G
Sbjct: 40 RFRCPMRRRKMSPNFLARSVRLRWLRSSPTWSQFPKMGTGSG 81

[Close]

BLAST of CsGy7G016150 vs. NCBI nr
Match: POE45382.1 (hypothetical protein CFP56_78060 [Quercus suber])

HSP 1 Score: 56.6 bits (135), Expect = 5.7e-05
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 12 ISPNFFGRSMRLRWFKSSPTWSQFPNIETSKG 44
          +SPNF  +S+RLRWFKSSPTWSQFPN+ T  G
Sbjct: 1  MSPNFLAKSVRLRWFKSSPTWSQFPNMGTGMG 32

[Close]

BLAST of CsGy7G016150 vs. NCBI nr
Match: KYP54810.1 (hypothetical protein KK1_001011 [Cajanus cajan])

HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04
Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 2  KFLYPIRSKKISPNFFGRSMRLRWFKSSPTWSQFPNIETSKGRRKLETLAV 53
          +F  P+R +K+S NFF RS+RLRW +SSPTWSQF  ++      K  TL +
Sbjct: 40 RFRCPMRRRKMSSNFFARSVRLRWLRSSPTWSQFLFLKLLVEEGKYTTLVI 90

[Close]

BLAST of CsGy7G016150 vs. NCBI nr
Match: KYP72546.1 (hypothetical protein KK1_005138 [Cajanus cajan])

HSP 1 Score: 55.1 bits (131), Expect = 1.7e-04
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 3  FLYPIRSKKISPNFFGRSMRLRWFKSSPTWSQF 36
          F  P+R +K+SPNFF RS+RLRW KSSPTW QF
Sbjct: 41 FRCPMRRRKMSPNFFARSVRLRWLKSSPTWCQF 73

[Close]

BLAST of CsGy7G016150 vs. TrEMBL
Match: tr|A0A151U0Z6|A0A151U0Z6_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005597 PE=4 SV=1)

HSP 1 Score: 60.8 bits (146), Expect = 2.0e-06
Identity = 25/42 (59.52%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 2  KFLYPIRSKKISPNFFGRSMRLRWFKSSPTWSQFPNIETSKG 44
          +F  P+R +K+SPNF  RS+RLRW +SSPTWSQFP + T  G
Sbjct: 40 RFRCPMRRRKMSPNFLARSVRLRWLRSSPTWSQFPKMGTGSG 81

[Close]

BLAST of CsGy7G016150 vs. TrEMBL
Match: tr|A0A2P4GMZ8|A0A2P4GMZ8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78060 PE=4 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 3.8e-05
Identity = 23/32 (71.88%), Postives = 27/32 (84.38%), Query Frame = 0


Query: 12 ISPNFFGRSMRLRWFKSSPTWSQFPNIETSKG 44
          +SPNF  +S+RLRWFKSSPTWSQFPN+ T  G
Sbjct: 1  MSPNFLAKSVRLRWFKSSPTWSQFPNMGTGMG 32

[Close]

BLAST of CsGy7G016150 vs. TrEMBL
Match: tr|A0A151TZQ5|A0A151TZQ5_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005138 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 23/33 (69.70%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 3  FLYPIRSKKISPNFFGRSMRLRWFKSSPTWSQF 36
          F  P+R +K+SPNFF RS+RLRW KSSPTW QF
Sbjct: 41 FRCPMRRRKMSPNFFARSVRLRWLKSSPTWCQF 73

[Close]

BLAST of CsGy7G016150 vs. TrEMBL
Match: tr|A0A151SJ33|A0A151SJ33_CAJCA (Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_001011 PE=4 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.1e-04
Identity = 25/51 (49.02%), Postives = 34/51 (66.67%), Query Frame = 0


Query: 2  KFLYPIRSKKISPNFFGRSMRLRWFKSSPTWSQFPNIETSKGRRKLETLAV 53
          +F  P+R +K+S NFF RS+RLRW +SSPTWSQF  ++      K  TL +
Sbjct: 40 RFRCPMRRRKMSSNFFARSVRLRWLRSSPTWSQFLFLKLLVEEGKYTTLVI 90

The following BLAST results are available for this feature:

BLAST of CsGy7G016150 vs. NCBI nr


Match Name	E-value	Identity	Description
KYP72989.1	3.0e-06	59.52	hypothetical protein KK1_005597 [Cajanus cajan]	[more]
POE45382.1	5.7e-05	71.88	hypothetical protein CFP56_78060 [Quercus suber]	[more]
KYP54810.1	1.7e-04	49.02	hypothetical protein KK1_001011 [Cajanus cajan]	[more]
KYP72546.1	1.7e-04	69.70	hypothetical protein KK1_005138 [Cajanus cajan]	[more]

BLAST of CsGy7G016150 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy7G016150 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G016150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A151U0Z6\|A0A151U0Z6_CAJCA	2.0e-06	59.52	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005597 PE=4 SV=1	[more]
tr\|A0A2P4GMZ8\|A0A2P4GMZ8_QUESU	3.8e-05	71.88	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_78060 PE=4 SV=1	[more]
tr\|A0A151TZQ5\|A0A151TZQ5_CAJCA	1.1e-04	69.70	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_005138 PE=4 SV=1	[more]
tr\|A0A151SJ33\|A0A151SJ33_CAJCA	1.1e-04	49.02	Uncharacterized protein OS=Cajanus cajan OX=3821 GN=KK1_001011 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G016150.1	CsGy7G016150.1	mRNA

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G016150	Wax gourd	cgybwgoB618
CsGy7G016150	Wax gourd	cgybwgoB626
CsGy7G016150	Wax gourd	cgybwgoB660
CsGy7G016150	Cucumber (Gy14) v2	cgybcgybB134
CsGy7G016150	Cucurbita maxima (Rimu)	cgybcmaB925
CsGy7G016150	Cucurbita maxima (Rimu)	cgybcmaB973
CsGy7G016150	Cucurbita moschata (Rifu)	cgybcmoB909
CsGy7G016150	Cucurbita moschata (Rifu)	cgybcmoB955
CsGy7G016150	Cucurbita pepo (Zucchini)	cgybcpeB906
CsGy7G016150	Cucurbita pepo (Zucchini)	cgybcpeB931
CsGy7G016150	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G016150	Bottle gourd (USVL1VR-Ls)	cgyblsiB472
CsGy7G016150	Melon (DHL92) v3.5.1	cgybmeB470
CsGy7G016150	Melon (DHL92) v3.5.1	cgybmeB501
CsGy7G016150	Melon (DHL92) v3.6.1	cgybmedB467
CsGy7G016150	Melon (DHL92) v3.6.1	cgybmedB497
CsGy7G016150	Watermelon (Charleston Gray)	cgybwcgB479
CsGy7G016150	Watermelon (Charleston Gray)	cgybwcgB486
CsGy7G016150	Watermelon (Charleston Gray)	cgybwcgB492
CsGy7G016150	Watermelon (97103) v1	cgybwmB537
CsGy7G016150	Watermelon (97103) v1	cgybwmB522
CsGy7G016150	Watermelon (97103) v1	cgybwmB530
CsGy7G016150	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G016150	Silver-seed gourd	carcgybB0120
CsGy7G016150	Silver-seed gourd	carcgybB0569
CsGy7G016150	Silver-seed gourd	carcgybB0807
CsGy7G016150	Cucumber (Chinese Long) v3	cgybcucB336
CsGy7G016150	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G016150	Watermelon (97103) v2	cgybwmbB490
CsGy7G016150	Watermelon (97103) v2	cgybwmbB536
CsGy7G016150	Watermelon (97103) v2	cgybwmbB543