CsGy7G016050 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTCTCTACATGCAGTTTTCTTCTCACTTTTGGTCATCAGTATTATTGTTGGTTCAGCTAATGGTGATATCTATGATGGTGGGTCTTACGATTCTATGACACCCAAATTGGCTAAGGATCAAGAAAGGCTTCTCTCTACCATGATTGGCATTGAAGGAATTATCCTTTACAAATTTGGTTCATCAATTTCCCCTCTTCAAGGTAAGCTTTATATATATATATATATCCACCAGACTAGAAGTTTATATACCAAAATAATTATAAATATTACAAAATATTATTTACGATATGTTTATATAGATATTGTTATATTTATAAATTTTATCAGTTTTACGATTTAAAATTATATTTTTTCAATTTTGACATAACAATTGTTTAGAAATACTAGAACATATTCATCTTTGCATATTTGAAAACTATTAAAGTCTTTGCGTGGATAGCACAATTTCTTTTTTCAATTTATTTATTACTTTTTTTAAAAGCATATAGATAATTTATGTCCGATTTTGTTTTTTTAAGTTATTTTCCTTCTTTTCTTACTATAGTTTACATTTTTATTTAGTAGGAAGATTGAGTTCTTAACTAATTTTTAGATATAAAAATAAGATTTTAAAAAGCTATATATGTTTTACACATGCAGGAGGTTTGGCAAGAATAACATGTAAAACAGTGGATGAGTATGGCTATGAGGCAGCTTCTTACACATTTTTAAGTGAGTCAAGTGATGAAAATGGCTATTTCTTGGCAACATTATCTCCTTCAGAGGTAGAAGACAAGAGAGAATTGAAGGAATGCAAAGCTTTTCTAGAGGTCTCACCATTAGAGAACTGTCAATCTCCTTCTGACCTCAACAATGGAGTCTCTGGTGCTCTTCTCCATTCTTACAAATTTTTGGTTCATAATAACATGAAACTCTTCTCTGTTGGGCCTTTCCTTTTCACTTGCCAAACTTAA ATGGGTTCTCTACATGCAGTTTTCTTCTCACTTTTGGTCATCAGTATTATTGTTGGTTCAGCTAATGGTGATATCTATGATGGTGGGTCTTACGATTCTATGACACCCAAATTGGCTAAGGATCAAGAAAGGCTTCTCTCTACCATGATTGGCATTGAAGGAATTATCCTTTACAAATTTGGTTCATCAATTTCCCCTCTTCAAGGAGGTTTGGCAAGAATAACATGTAAAACAGTGGATGAGTATGGCTATGAGGCAGCTTCTTACACATTTTTAAGTGAGTCAAGTGATGAAAATGGCTATTTCTTGGCAACATTATCTCCTTCAGAGGTAGAAGACAAGAGAGAATTGAAGGAATGCAAAGCTTTTCTAGAGGTCTCACCATTAGAGAACTGTCAATCTCCTTCTGACCTCAACAATGGAGTCTCTGGTGCTCTTCTCCATTCTTACAAATTTTTGGTTCATAATAACATGAAACTCTTCTCTGTTGGGCCTTTCCTTTTCACTTGCCAAACTTAA ATGGGTTCTCTACATGCAGTTTTCTTCTCACTTTTGGTCATCAGTATTATTGTTGGTTCAGCTAATGGTGATATCTATGATGGTGGGTCTTACGATTCTATGACACCCAAATTGGCTAAGGATCAAGAAAGGCTTCTCTCTACCATGATTGGCATTGAAGGAATTATCCTTTACAAATTTGGTTCATCAATTTCCCCTCTTCAAGGAGGTTTGGCAAGAATAACATGTAAAACAGTGGATGAGTATGGCTATGAGGCAGCTTCTTACACATTTTTAAGTGAGTCAAGTGATGAAAATGGCTATTTCTTGGCAACATTATCTCCTTCAGAGGTAGAAGACAAGAGAGAATTGAAGGAATGCAAAGCTTTTCTAGAGGTCTCACCATTAGAGAACTGTCAATCTCCTTCTGACCTCAACAATGGAGTCTCTGGTGCTCTTCTCCATTCTTACAAATTTTTGGTTCATAATAACATGAAACTCTTCTCTGTTGGGCCTTTCCTTTTCACTTGCCAAACTTAA MGSLHAVFFSLLVISIIVGSANGDIYDGGSYDSMTPKLAKDQERLLSTMIGIEGIILYKFGSSISPLQGGLARITCKTVDEYGYEAASYTFLSESSDENGYFLATLSPSEVEDKRELKECKAFLEVSPLENCQSPSDLNNGVSGALLHSYKFLVHNNMKLFSVGPFLFTCQT
BLAST of CsGy7G016050 vs. NCBI nr
Match: XP_011659366.1 (PREDICTED: proline-rich protein 3-like [Cucumis sativus] >KGN44955.1 hypothetical protein Csa_7G398170 [Cucumis sativus]) HSP 1 Score: 344.0 bits (881), Expect = 3.0e-91 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsGy7G016050 vs. NCBI nr
Match: XP_008451553.1 (PREDICTED: proline-rich protein 3-like [Cucumis melo]) HSP 1 Score: 328.6 bits (841), Expect = 1.3e-86 Identity = 166/172 (96.51%), Postives = 166/172 (96.51%), Query Frame = 0
BLAST of CsGy7G016050 vs. NCBI nr
Match: XP_022991245.1 (proline-rich protein 3-like [Cucurbita maxima]) HSP 1 Score: 251.5 bits (641), Expect = 2.0e-63 Identity = 124/139 (89.21%), Postives = 133/139 (95.68%), Query Frame = 0
BLAST of CsGy7G016050 vs. NCBI nr
Match: XP_023548997.1 (proline-rich protein 3-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 250.4 bits (638), Expect = 4.5e-63 Identity = 132/172 (76.74%), Postives = 140/172 (81.40%), Query Frame = 0
BLAST of CsGy7G016050 vs. NCBI nr
Match: XP_022953725.1 (proline-rich protein 3-like [Cucurbita moschata]) HSP 1 Score: 246.9 bits (629), Expect = 5.0e-62 Identity = 131/172 (76.16%), Postives = 139/172 (80.81%), Query Frame = 0
BLAST of CsGy7G016050 vs. TAIR10
Match: AT2G47540.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 147.1 bits (370), Expect = 9.8e-36 Identity = 69/131 (52.67%), Postives = 101/131 (77.10%), Query Frame = 0
BLAST of CsGy7G016050 vs. TAIR10
Match: AT4G02270.1 (root hair specific 13) HSP 1 Score: 111.7 bits (278), Expect = 4.5e-25 Identity = 63/165 (38.18%), Postives = 86/165 (52.12%), Query Frame = 0
BLAST of CsGy7G016050 vs. TAIR10
Match: AT2G47530.1 (Pollen Ole e 1 allergen and extensin family protein) HSP 1 Score: 85.5 bits (210), Expect = 3.5e-17 Identity = 59/173 (34.10%), Postives = 88/173 (50.87%), Query Frame = 0
BLAST of CsGy7G016050 vs. TAIR10
Match: AT3G62680.1 (proline-rich protein 3) HSP 1 Score: 78.2 bits (191), Expect = 5.6e-15 Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = 0
BLAST of CsGy7G016050 vs. TAIR10
Match: AT1G54970.1 (proline-rich protein 1) HSP 1 Score: 72.8 bits (177), Expect = 2.3e-13 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of CsGy7G016050 vs. Swiss-Prot
Match: sp|Q9LZJ7|PRP3_ARATH (Proline-rich protein 3 OS=Arabidopsis thaliana OX=3702 GN=PRP3 PE=2 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.0e-13 Identity = 41/120 (34.17%), Postives = 65/120 (54.17%), Query Frame = 0
BLAST of CsGy7G016050 vs. Swiss-Prot
Match: sp|Q9FZ35|PRP1_ARATH (Proline-rich protein 1 OS=Arabidopsis thaliana OX=3702 GN=PRP1 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 4.2e-12 Identity = 41/118 (34.75%), Postives = 59/118 (50.00%), Query Frame = 0
BLAST of CsGy7G016050 vs. TrEMBL
Match: tr|A0A0A0K5H5|A0A0A0K5H5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398170 PE=4 SV=1) HSP 1 Score: 344.0 bits (881), Expect = 2.0e-91 Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
BLAST of CsGy7G016050 vs. TrEMBL
Match: tr|A0A1S3BRS8|A0A1S3BRS8_CUCME (proline-rich protein 3-like OS=Cucumis melo OX=3656 GN=LOC103492798 PE=4 SV=1) HSP 1 Score: 328.6 bits (841), Expect = 8.6e-87 Identity = 166/172 (96.51%), Postives = 166/172 (96.51%), Query Frame = 0
BLAST of CsGy7G016050 vs. TrEMBL
Match: tr|A0A2P4L545|A0A2P4L545_QUESU (Proline-rich protein 3 OS=Quercus suber OX=58331 GN=CFP56_76913 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39 Identity = 86/158 (54.43%), Postives = 115/158 (72.78%), Query Frame = 0
BLAST of CsGy7G016050 vs. TrEMBL
Match: tr|A0A1S2XZ50|A0A1S2XZ50_CICAR (proline-rich protein 3-like OS=Cicer arietinum OX=3827 GN=LOC101514014 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.8e-39 Identity = 83/171 (48.54%), Postives = 118/171 (69.01%), Query Frame = 0
BLAST of CsGy7G016050 vs. TrEMBL
Match: tr|I3TAG1|I3TAG1_LOTJA (Uncharacterized protein OS=Lotus japonicus OX=34305 PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.3e-39 Identity = 84/170 (49.41%), Postives = 115/170 (67.65%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |