CsGy7G015990 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G015990
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	pectinesterase (Protein of unknown function%2C DUF538)
Location	Chr7 : 19790884 .. 19791363 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTCAATCTCATTATCAACCTCTCTCGTCTCCGATCCAGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGA

mRNA sequence

ATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTCAATCTCATTATCAACCTCTCTCGTCTCCGATCCAGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGA

Coding sequence (CDS)

ATGAGTTTCTCTAAACTTATGGCTTCTCTTCTTCTCCTTGCTTCAATCTCATTATCAACCTCTCTCGTCTCCGATCCAGAAGCTCTTACCGCCTACGATATTCTCCAACAGTACGGTTTCCCCGTCGGCATTCTTCCTATAGGTGCTACCGGCTATCAATTGAACAGAGCCACCGGTGAATTCAGCCTCTACTTGAGTCAGAAATGCAAATTCAAAATCGATTCCTATGAATTGGAGTATAAATCTACCTTACAAGGCGTGATTTCCAAAGGCAGAATCAGGAAACTCAAAGGTGTTTCTGTTAAGATCTTCCTCTTGTGGCTCAGCATCGTCGAAGTCGTTAACGATGGTGACGACCTTCAATTTTCTGTTGGAATTGCTTCTGCAAATTTCCCGCTGGACAGTTTCTATGAGTCGCCGCGGTGTGGATGTGGATTTGATTGCGATAATGGCGCTGGGAGCTTGGTTTCGGCTTCTTGA

Protein sequence

MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS

Homology

[Close]

BLAST of CsGy7G015990 vs. NCBI nr
Match: XP_008451556.1 (PREDICTED: uncharacterized protein LOC103492801 [Cucumis melo])

HSP 1 Score: 295.0 bits (754), Expect = 1.5e-76
Identity = 149/159 (93.71%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60
           MSFSKL+ASLLLLASISLSTSL+SDP+ LTAYDILQQYGFPVGILPIGATGY+LNRATGE
Sbjct: 1   MSFSKLLASLLLLASISLSTSLISDPKTLTAYDILQQYGFPVGILPIGATGYELNRATGE 60

Query: 61  FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL 120
           FSLYL+Q+CKFKIDSYELEYKST+QGVIS+GRIRKLKGVSVKI LLWLSIVEVVNDGDDL
Sbjct: 61  FSLYLNQRCKFKIDSYELEYKSTVQGVISQGRIRKLKGVSVKIVLLWLSIVEVVNDGDDL 120

Query: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 160
           QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 159

[Close]

BLAST of CsGy7G015990 vs. NCBI nr
Match: XP_004136020.2 (PREDICTED: uncharacterized protein LOC101206914 [Cucumis sativus])

HSP 1 Score: 288.9 bits (738), Expect = 1.1e-74
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0


Query: 15  SISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKID 74
           SISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKID
Sbjct: 56  SISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKID 115

Query: 75  SYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLD 134
           SYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLD
Sbjct: 116 SYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLD 175

Query: 135 SFYESPRCGCGFDCDNGAGSLVSAS 160
           SFYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 176 SFYESPRCGCGFDCDNGAGSLVSAS 200

[Close]

BLAST of CsGy7G015990 vs. NCBI nr
Match: KGN44949.1 (hypothetical protein Csa_7G398110 [Cucumis sativus])

HSP 1 Score: 268.9 bits (686), Expect = 1.1e-68
Identity = 135/144 (93.75%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 16  ISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS 75
           +S +  +V   EALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS
Sbjct: 6   VSNALKVVVFREALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS 65

Query: 76  YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS 135
           YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS
Sbjct: 66  YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS 125

Query: 136 FYESPRCGCGFDCDNGAGSLVSAS 160
           FYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 126 FYESPRCGCGFDCDNGAGSLVSAS 149

[Close]

BLAST of CsGy7G015990 vs. NCBI nr
Match: XP_022991260.1 (uncharacterized protein At5g01610-like [Cucurbita maxima])

HSP 1 Score: 243.0 bits (619), Expect = 6.7e-61
Identity = 124/159 (77.99%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60
           MSFSKLMASLL LA +S S+ LVS  +ALTAYDI+QQYGFPVGILP+G TGY+L+R TG 
Sbjct: 1   MSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYELDRDTGS 60

Query: 61  FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL 120
           FSL+L QKCKF IDSYELEYK T+ GVIS+GR+ KLKGVSVKI +LWLSIVEVV+DGD+L
Sbjct: 61  FSLFLDQKCKFTIDSYELEYKPTITGVISQGRLSKLKGVSVKILILWLSIVEVVSDGDEL 120

Query: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 160
            FSVGIASANFP+DSFYESP+CGCGFDC N  GSLVSAS
Sbjct: 121 GFSVGIASANFPIDSFYESPQCGCGFDC-NKVGSLVSAS 158

[Close]

BLAST of CsGy7G015990 vs. NCBI nr
Match: XP_022953728.1 (uncharacterized protein LOC111456173 [Cucurbita moschata])

HSP 1 Score: 241.1 bits (614), Expect = 2.5e-60
Identity = 123/159 (77.36%), Postives = 140/159 (88.05%), Query Frame = 0


Query: 1   MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60
           MSFSKLMASLL LA +S S+ LVS  +ALTAYDI+QQYGFPVGILP+G TGY+L+R TG 
Sbjct: 1   MSFSKLMASLLFLAFVSFSSPLVSAQKALTAYDIIQQYGFPVGILPLGVTGYKLDRDTGS 60

Query: 61  FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL 120
           FSL+L QKCKF IDSYELEYK T+ GVIS+G++ KLKGVSVKI +LWLSIVEVV+DGD+L
Sbjct: 61  FSLFLDQKCKFAIDSYELEYKPTVTGVISQGKLSKLKGVSVKILILWLSIVEVVSDGDEL 120

Query: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 160
            FSVGIASANFP+DSFYESP+CGCGFDC N  GSLVSAS
Sbjct: 121 GFSVGIASANFPIDSFYESPQCGCGFDC-NKVGSLVSAS 158

[Close]

BLAST of CsGy7G015990 vs. TAIR10
Match: AT1G02816.1 (Protein of unknown function, DUF538)

HSP 1 Score: 161.4 bits (407), Expect = 4.6e-40
Identity = 72/126 (57.14%), Postives = 95/126 (75.40%), Query Frame = 0


Query: 24  SDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKID-SYELEYKS 83
           +D +  TAY +LQ Y FPVGILP G   Y L+++TG+F  Y ++ C F +  SY+L+YKS
Sbjct: 25  NDDDIPTAYTLLQSYNFPVGILPKGVVSYDLDKSTGQFHAYFNKSCSFALQGSYQLDYKS 84

Query: 84  TLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDSFYESPRC 143
           T+ G IS+ +I KL GV VK+  LWL+IVEV+ +GD+L+FSVGI SANF +D FYESP+C
Sbjct: 85  TISGYISENKITKLTGVKVKVLFLWLNIVEVIRNGDELEFSVGITSANFEIDEFYESPQC 144

Query: 144 GCGFDC 149
           GCGFDC
Sbjct: 145 GCGFDC 150

[Close]

BLAST of CsGy7G015990 vs. TAIR10
Match: AT4G02360.1 (Protein of unknown function, DUF538)

HSP 1 Score: 156.4 bits (394), Expect = 1.5e-38
Identity = 71/122 (58.20%), Postives = 89/122 (72.95%), Query Frame = 0


Query: 30  TAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDSYELEYKSTLQGVIS 89
           TAYD ++ Y  P GILP G   Y+LN  TG F +Y +  C+F I SY+L+YKST+ GVIS
Sbjct: 28  TAYDAVKLYNLPPGILPKGVVDYELNPKTGNFKVYFNDTCEFTIQSYQLKYKSTISGVIS 87

Query: 90  KGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDSFYESPRCGCGFDCD 149
            G ++ LKGVSVK+   W++I EV  DG DL FSVGIASA+FP  +F ESP+CGCGFDC+
Sbjct: 88  PGHVKNLKGVSVKVLFFWVNIAEVSLDGADLDFSVGIASASFPAANFEESPQCGCGFDCN 147

Query: 150 NG 152
           NG
Sbjct: 148 NG 149

[Close]

BLAST of CsGy7G015990 vs. TAIR10
Match: AT4G02370.1 (Protein of unknown function, DUF538)

HSP 1 Score: 156.0 bits (393), Expect = 1.9e-38
Identity = 72/144 (50.00%), Postives = 101/144 (70.14%), Query Frame = 0


Query: 6   LMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYL 65
           L+AS L L+S++ +    ++ +  TAY +LQ Y FPVGILP G   Y L+  TG+F  Y 
Sbjct: 7   LIASCLFLSSLTAAVVTAAESDTPTAYSLLQSYNFPVGILPKGVVAYDLDTTTGKFHAYF 66

Query: 66  SQKCKFK-IDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSV 125
           +  C F  + SY+L YKST+ G IS+ +++KL GV VK+  LWL+IVEV+ +GD+++FSV
Sbjct: 67  NDSCSFNLVGSYQLNYKSTISGYISENKLKKLTGVKVKVLFLWLNIVEVIRNGDEMEFSV 126

Query: 126 GIASANFPLDSFYESPRCGCGFDC 149
           GI SANF +  F ESP+CGCGF+C
Sbjct: 127 GITSANFAIQEFLESPQCGCGFEC 150

[Close]

BLAST of CsGy7G015990 vs. TAIR10
Match: AT1G02813.1 (Protein of unknown function, DUF538)

HSP 1 Score: 133.3 bits (334), Expect = 1.3e-31
Identity = 64/141 (45.39%), Postives = 93/141 (65.96%), Query Frame = 0


Query: 9   SLLLLASISLSTSL-VSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQ 68
           S+ ++  + LSTS+ VS  +  + Y +L+ Y  P GILP G   Y LNR TG F +  + 
Sbjct: 2   SIFIIFLLLLSTSVSVSGQKKRSVYQVLENYTLPRGILPEGVHDYDLNRRTGVFKVRFNT 61

Query: 69  KCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIA 128
            C+F IDSY+++YK  + G+I++GR+ +L GVSVK+   W++I EV  DGDD++F VG A
Sbjct: 62  TCQFSIDSYKVKYKPVISGIITRGRVIRLIGVSVKVLFFWINISEVSRDGDDVEFFVGAA 121

Query: 129 SANFPLDSFYESPRCGCGFDC 149
           S  F    F +SP+CGCGF+C
Sbjct: 122 SEEFSSKYFVDSPKCGCGFNC 142

[Close]

BLAST of CsGy7G015990 vs. TAIR10
Match: AT5G19590.1 (Protein of unknown function, DUF538)

HSP 1 Score: 88.6 bits (218), Expect = 3.8e-18
Identity = 51/144 (35.42%), Postives = 81/144 (56.25%), Query Frame = 0


Query: 1   MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60
           M  S  + S+L+L  ISL        +   A+  L  +GFP+G+LP+    Y LN+ +G+
Sbjct: 1   MKISLFLLSILILLPISLQDPTPEVKKPTRAHAELTNHGFPIGLLPLSVKDYFLNQTSGD 60

Query: 61  FSLYLSQKCKFKI--DSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGD 120
           FSL+L+  CK  +  D+Y   Y + + G IS+G+I +L+G+ V+ F    SI  + + GD
Sbjct: 61  FSLFLNGACKITLPPDNYIATYSNKVTGRISQGKIAELQGIRVRAFFKSWSITGIRSSGD 120

Query: 121 DLQFSVGIASANFPLDSFYESPRC 143
           +L F V   +A +P  +F ES  C
Sbjct: 121 NLVFEVAGITAKYPSKNFDESLDC 144

[Close]

BLAST of CsGy7G015990 vs. TrEMBL
Match: tr|A0A1S3BSV3|A0A1S3BSV3_CUCME (uncharacterized protein LOC103492801 OS=Cucumis melo OX=3656 GN=LOC103492801 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 9.8e-77
Identity = 149/159 (93.71%), Postives = 157/159 (98.74%), Query Frame = 0


Query: 1   MSFSKLMASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGE 60
           MSFSKL+ASLLLLASISLSTSL+SDP+ LTAYDILQQYGFPVGILPIGATGY+LNRATGE
Sbjct: 1   MSFSKLLASLLLLASISLSTSLISDPKTLTAYDILQQYGFPVGILPIGATGYELNRATGE 60

Query: 61  FSLYLSQKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDL 120
           FSLYL+Q+CKFKIDSYELEYKST+QGVIS+GRIRKLKGVSVKI LLWLSIVEVVNDGDDL
Sbjct: 61  FSLYLNQRCKFKIDSYELEYKSTVQGVISQGRIRKLKGVSVKIVLLWLSIVEVVNDGDDL 120

Query: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 160
           QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 121 QFSVGIASANFPLDSFYESPRCGCGFDCDNGAGSLVSAS 159

[Close]

BLAST of CsGy7G015990 vs. TrEMBL
Match: tr|A0A0A0K7U0|A0A0A0K7U0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398110 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 7.5e-69
Identity = 135/144 (93.75%), Postives = 138/144 (95.83%), Query Frame = 0


Query: 16  ISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS 75
           +S +  +V   EALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS
Sbjct: 6   VSNALKVVVFREALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLSQKCKFKIDS 65

Query: 76  YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS 135
           YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS
Sbjct: 66  YELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGIASANFPLDS 125

Query: 136 FYESPRCGCGFDCDNGAGSLVSAS 160
           FYESPRCGCGFDCDNGAGSLVSAS
Sbjct: 126 FYESPRCGCGFDCDNGAGSLVSAS 149

[Close]

BLAST of CsGy7G015990 vs. TrEMBL
Match: tr|A0A0D2QRM0|A0A0D2QRM0_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G127500 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.1e-47
Identity = 92/143 (64.34%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 7   MASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLS 66
           + S++ L  +SL  SL S  + L+AY +LQQY FP GILP G +GY+LNR TGEFS +L 
Sbjct: 3   LRSVIFLILVSLPASLASANDKLSAYQVLQQYDFPAGILPKGVSGYELNRGTGEFSAHLQ 62

Query: 67  QKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGI 126
             C FKIDSYEL YKST+QGVIS GRI  LKGVSVK+   WL IV+V++DGD+++FSVGI
Sbjct: 63  GTCNFKIDSYELSYKSTIQGVISPGRITNLKGVSVKVLFFWLDIVQVIHDGDEMEFSVGI 122

Query: 127 ASANFPLDSFYESPRCGCGFDCD 150
           ASANFP+D+FYESP+CGCGFDC+
Sbjct: 123 ASANFPIDNFYESPQCGCGFDCN 145

[Close]

BLAST of CsGy7G015990 vs. TrEMBL
Match: tr|A0A2P5RNU2|A0A2P5RNU2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD14618 PE=4 SV=1)

HSP 1 Score: 197.6 bits (501), Expect = 2.1e-47
Identity = 92/143 (64.34%), Postives = 114/143 (79.72%), Query Frame = 0


Query: 7   MASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLS 66
           + S++ L  +SL  SL S  + L+AY +LQQY FP GILP G +GY+LNR TGEFS +L 
Sbjct: 3   LRSVIFLILVSLPASLASANDKLSAYQVLQQYDFPAGILPKGVSGYELNRGTGEFSAHLQ 62

Query: 67  QKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGI 126
             C FKIDSYEL YKST+QGVIS GRI  LKGVSVK+   WL IV+V++DGD+++FSVGI
Sbjct: 63  GTCNFKIDSYELSYKSTIQGVISPGRITNLKGVSVKVLFFWLDIVQVIHDGDEMEFSVGI 122

Query: 127 ASANFPLDSFYESPRCGCGFDCD 150
           ASANFP+D+FYESP+CGCGFDC+
Sbjct: 123 ASANFPIDNFYESPQCGCGFDCN 145

[Close]

BLAST of CsGy7G015990 vs. TrEMBL
Match: tr|A0A1U8K4U1|A0A1U8K4U1_GOSHI (uncharacterized protein At5g01610-like OS=Gossypium hirsutum OX=3635 GN=LOC107912365 PE=4 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 6.2e-47
Identity = 92/143 (64.34%), Postives = 113/143 (79.02%), Query Frame = 0


Query: 7   MASLLLLASISLSTSLVSDPEALTAYDILQQYGFPVGILPIGATGYQLNRATGEFSLYLS 66
           + S++ L  +SL  SL S  + L+AY +LQQY FP GILP G +GY+LNR TGEFS +L 
Sbjct: 3   LRSVIFLILVSLPASLASANDKLSAYQVLQQYDFPAGILPKGVSGYELNRGTGEFSAHLQ 62

Query: 67  QKCKFKIDSYELEYKSTLQGVISKGRIRKLKGVSVKIFLLWLSIVEVVNDGDDLQFSVGI 126
             C FKIDSYEL YKST+QGVIS GRI  LKGVSVK+   WL IV+V++DGD+++FSVGI
Sbjct: 63  GTCNFKIDSYELSYKSTIQGVISPGRITNLKGVSVKVLFFWLDIVQVIHDGDEMEFSVGI 122

Query: 127 ASANFPLDSFYESPRCGCGFDCD 150
           ASANFP D+FYESP+CGCGFDC+
Sbjct: 123 ASANFPSDNFYESPQCGCGFDCN 145

The following BLAST results are available for this feature:

BLAST of CsGy7G015990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008451556.1	1.5e-76	93.71	PREDICTED: uncharacterized protein LOC103492801 [Cucumis melo]	[more]
XP_004136020.2	1.1e-74	100.00	PREDICTED: uncharacterized protein LOC101206914 [Cucumis sativus]	[more]
KGN44949.1	1.1e-68	93.75	hypothetical protein Csa_7G398110 [Cucumis sativus]	[more]
XP_022991260.1	6.7e-61	77.99	uncharacterized protein At5g01610-like [Cucurbita maxima]	[more]
XP_022953728.1	2.5e-60	77.36	uncharacterized protein LOC111456173 [Cucurbita moschata]	[more]

BLAST of CsGy7G015990 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G02816.1	4.6e-40	57.14	Protein of unknown function, DUF538	[more]
AT4G02360.1	1.5e-38	58.20	Protein of unknown function, DUF538	[more]
AT4G02370.1	1.9e-38	50.00	Protein of unknown function, DUF538	[more]
AT1G02813.1	1.3e-31	45.39	Protein of unknown function, DUF538	[more]
AT5G19590.1	3.8e-18	35.42	Protein of unknown function, DUF538	[more]

BLAST of CsGy7G015990 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G015990 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BSV3\|A0A1S3BSV3_CUCME	9.8e-77	93.71	uncharacterized protein LOC103492801 OS=Cucumis melo OX=3656 GN=LOC103492801 PE=...	[more]
tr\|A0A0A0K7U0\|A0A0A0K7U0_CUCSA	7.5e-69	93.75	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398110 PE=4 SV=1	[more]
tr\|A0A0D2QRM0\|A0A0D2QRM0_GOSRA	2.1e-47	64.34	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_007G127500 PE=4 ...	[more]
tr\|A0A2P5RNU2\|A0A2P5RNU2_GOSBA	2.1e-47	64.34	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD14618 PE=4 SV...	[more]
tr\|A0A1U8K4U1\|A0A1U8K4U1_GOSHI	6.2e-47	64.34	uncharacterized protein At5g01610-like OS=Gossypium hirsutum OX=3635 GN=LOC10791...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007493	DUF538
IPR036758	At5g01610-like

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G015990.1	CsGy7G015990.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036758	At5g01610-like superfamily	GENE3D	G3DSA:2.30.240.10		coord: 18..144 e-value: 3.8E-34 score: 119.5
IPR036758	At5g01610-like superfamily	SUPERFAMILY	SSF141562	At5g01610-like	coord: 6..148
IPR007493	Protein of unknown function DUF538	PFAM	PF04398	DUF538	coord: 31..136 e-value: 1.2E-34 score: 119.0
IPR007493	Protein of unknown function DUF538	PANTHER	PTHR31676	FAMILY NOT NAMED	coord: 7..150
None	No IPR available	PANTHER	PTHR31676:SF27	F22D16.19 PROTEIN	coord: 7..150

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G015990	Cucumber (Gy14) v2	cgybcgybB134
CsGy7G015990	Cucurbita maxima (Rimu)	cgybcmaB925
CsGy7G015990	Cucurbita maxima (Rimu)	cgybcmaB973
CsGy7G015990	Cucurbita moschata (Rifu)	cgybcmoB909
CsGy7G015990	Cucurbita moschata (Rifu)	cgybcmoB955
CsGy7G015990	Cucurbita pepo (Zucchini)	cgybcpeB906
CsGy7G015990	Cucurbita pepo (Zucchini)	cgybcpeB931
CsGy7G015990	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G015990	Bottle gourd (USVL1VR-Ls)	cgyblsiB472
CsGy7G015990	Melon (DHL92) v3.5.1	cgybmeB470
CsGy7G015990	Melon (DHL92) v3.5.1	cgybmeB501
CsGy7G015990	Melon (DHL92) v3.6.1	cgybmedB467
CsGy7G015990	Melon (DHL92) v3.6.1	cgybmedB497
CsGy7G015990	Watermelon (Charleston Gray)	cgybwcgB479
CsGy7G015990	Watermelon (Charleston Gray)	cgybwcgB486
CsGy7G015990	Watermelon (Charleston Gray)	cgybwcgB492
CsGy7G015990	Watermelon (97103) v1	cgybwmB537
CsGy7G015990	Watermelon (97103) v1	cgybwmB522
CsGy7G015990	Watermelon (97103) v1	cgybwmB530
CsGy7G015990	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G015990	Silver-seed gourd	carcgybB0120
CsGy7G015990	Silver-seed gourd	carcgybB0569
CsGy7G015990	Silver-seed gourd	carcgybB0807
CsGy7G015990	Cucumber (Chinese Long) v3	cgybcucB336
CsGy7G015990	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G015990	Watermelon (97103) v2	cgybwmbB490
CsGy7G015990	Watermelon (97103) v2	cgybwmbB510
CsGy7G015990	Watermelon (97103) v2	cgybwmbB536
CsGy7G015990	Watermelon (97103) v2	cgybwmbB543
CsGy7G015990	Wax gourd	cgybwgoB618
CsGy7G015990	Wax gourd	cgybwgoB626
CsGy7G015990	Wax gourd	cgybwgoB660