CsGy7G010210 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G010210
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	RNA-directed DNA methylation 4-like isoform X2
Location	Chr7 : 12859832 .. 12865521 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTCCGAAGAGGAGACCTCCGTAGTGTTAAGTCGGAGGACATTGTTATTACTCTTCTTCTTTCCTTTTTAATAAGAAAAAAAGAAGAGAAAATAAGAGAAAAGGGTAACCACGCACGCTGCCCTCTCCATTGGACTTTCGAAGTTTCTCTTCCGCTCACAATCTCTCCTTCACGCCGACGCCACCACCAGCCGACAACCCTCCTCCGACGCCGGACGACGACCAGCGCGCCACGCCAGCCACCCTCAACTTTTAAATATCCTTTGCCGTCAGTCTAGGTCGGGGCTGTCCTGTGTCATTCCGTCCGTGGTCGTTGAGCCGGGCCAGCTTTGAGACGCGTCGTGTTGCTTTCTGCCTGTAGATCGTCGTAATTTGAGGTCAGTTTTGCACGTTGGGAGTTGATTCTCCGAAATCTTTCCACTATTCCACTATGGATCATAAGTATATTACCAGCTTTCAATTTGAATGCTATTCAATGTTTAATTCCAAGACTTAAAGTTAAAGTTTACTTGGAGATATTTTGTCATTCTGTCTAATTATTGCTAAAGCTTGTCCAAATAATTTATCTTGAATGTCCAAGGAAGCAGCCATACAATTATGTATACAACCCATTGAAAATTTCATCAACCTTAATAGAATTTTGGGTTTAAATAATATTCCACTGCATGCAAAGGGCGATGCAACTGAAGCTCCCATCATTGTAAATTAGTTTTGTACTTTTCTTCCTTACCATCAAAGGATTTAGCGATGGTCTCATTAGCTCTATCCATAACCTCATAAATGGTCGAGCTTCTTCTTATGTTTTGAGTTTAGAAAGATATTTGTTCTTCCTTGAAAGAGAGGATAACAGGAGAGGGATTTCGATATTGTATCAAGGAATTCATTCCTATACTATCATCAATAATATTAGTAGAAATTACATACAATAGTTGGCTTCCATCATAATGTCATGCAAGTTGTAGTAAAGCGATTCTTCACCGGTCTAACTAATTCCTTTTGATTAGTAAACCGCCTCATCATGTTTAACAATCCTAGACTAACATAAATGAAACTGCTAACATACATGCCTCTTTTTAATGGTTTGCAAATATGTGGGATCTTGTATATATCCTCCAACATCAAATCACTGAGGGCACATGGAGACCAAATTAATTTTGATCATTTTGCTTCTAACAATTGCCTTATTAACAAAGTAAAATAAGAACAATATTTAGGCTTCTTAGTTGTGTAAGCATAAGACTAATAGATTTAATAAAGAGTTGGTACTTTGCATTATTTCTTACCTGCCATAACATTTGCTGAAGCACTATGAATAAAAACTTGTTTGACATTAACTTTTCCGATGCAATAGCAACTTGTTTGACATGACATTAACTTTTCCGATGCAATAGCAACTTGTTTGACATTAGCTTTTCCAATGCGCTCTATGAAATTGTCAAGGGACTCGAACATTTTCTTTCCATCCTTCACATAAGATGAAGCAATAAATACGGTGCCTTTAGGACTATTATCTAAAAAGTTAACCAATGTCCTATGTCTTCTATTTGTCCATCCATCAGCCATAACGGTGTGTCCATCCTTTGCCGACTTTGCCTTATGGCTCTTCATCAACTCATTTGCAGATTCCAATTCCTTTTTCAAACACGACACTCTCAATTCATGATACGATGGTGGTTTCAGTCCAGGACCGAATTGTCCTATTGCCTCAATCATAGGGGCAAAGCTATCATAAGTGCAAGTGTGTGGTGTTTGGCCATTTTTTATTACTACCTTTTTGCTTGAAATCATTGAACTTCTACATTCACATCATTATAACAGTGTCTTCCATAGTTCCCTATTCCATCCTTGTTTCTTTGTGTTCTTTGCGTTTTGTTGCAGCTCATTCGTTAGGATGAATTCCCAATGCATACCTTCCTGTTAATGTTTCGTTTTAGGTTGAACTATGCTTTTAGGTTTTTATTTTTATTGTTGGTTGCTTTTGTTTTGATGCCACTGTTGGCACTTTTATATCTCTAAATGGAAGTCTTCAGTTTTGAAGAAAGCAAGAAGAGAGAGAAAAAAAAGAGCTTGTAGATTTGGCAAAAAAAGCAGTCTTCATAGTGTGTAGAAAAGTTACTTATTGTTTCCTCATTTAAGATGTTGCTCACGAAGGTTAAAAATATGTATTGTACTACTCATGGTGTTTGTTTCTGTCTTCTGTGTTTGAATGCAGGTTCTTTCTTCATCATTGCTTGCCCTAACCACATTAATTGATGCCATAGTGAGGGTCGATCTGAACGATCAGGGACTGGAAAAGCAGTGGTGAAACAAGGTGTGCTTCCAATTCTAGGGAGACCGTTGAAGCCCAAAAGTATTCAGTCTTAAGGGGTCTTGCCAAAAATATTCCTCATGCTTTTAGAGAATAGAACATAAAACTATTGCCCGTCGTATGGCGCTCATTGGTGAGAGCTCTTCTTCTGTTTCCAAACTCGTGGACGAAAAGCCAGTTTTAGTTAGGGTTAAGCGCAAAGCTTCCCAATCTCGACTTGATGCATTATGTGAGTTCTGTTTAGACACTCTCTTTCATTCCCTTCCTCAAAGAATTTCTTTTGCTAATTTAGGTTTATGATTTGCATAGTTCAGCTTTTTAACTCTTGGAGATCACATTCTTCTATTGTCTTCTTATTAGCCATCTCCTTCGATGTTTAATTATTTATGAGCCATCGAATGAAGTCTGAATTGTCCATGTTTGCATTGATCTTTGTGATGATTTTCAGCCTATTGTTATGTGGTGCACACATAGTTATAGTCAATTTCTTTGTTCCCTTGCCCCGATATATTTATATGTTTTTTGCATTGTTTATGTATTCTATCCCCAAAAATTTTATGCTCTAGGGCTGGAAATCAATGAGAGGCCATTGAAGCGACCACTCTTGGATTTTGAGAATTTATCAATTTCAGAAACACTCCACAAAGGTCTGATCATTTCTAAACCTGTACTTGTGTTCTTTTTTTTTTCTTTACACCACAAGTCGATCTTTCCTGAGTTGTTTGTAATTTCACATGGGTCAAATGCTTGTTTTACCTTTGTAATTATCTCTTGCACCGTAAGTACCACTTAGCCATTAATAAACATGTTCATGCAACAATGTATGGTTCTTCACGAATATTCAGTCGCAGATTATATGTAGTATTTTTCTTCTTCTGGGGGGATGTAAATTTGTTGCATGGATTCTTTGTGGGAAAACTGTGTCGACCTTTATATGAAAAGTAATGGGGTGAATTTCATTGTTGTTATTGTTTCTTCTTTTTCTATGAGGGAGGGGAGAAGTGGATTTATTATCTTTATGGTTCTTGCCAATTGATTAAACGTCTCTATTTGGTTGGGGTATCAACCTCGAAAATGATTTTACTGTATTTCACGGTTATATGGTCAATGGAGTATGATTTAAATATAAATCTATTTAACTCCCTATCCCTAATTGGATATCTTTCTCTTGCATCAGAGGAATTAAAGACCAAGAAGATATTTGTACAGCATGTGGAGACATTAAGAAGCTCTGATGCCACTGTTGACATTGTGCAGTCTTTTGTGGTCAGTACTCTAGTTAGTTATTAATCTTCTTCTTCAATATTTTAGCTCTCTTCTACATCAATAACCATTTTTCCTTTAGGCACCTGATGCTGCTTCCACCATTGAAAATAACCTAAAGAATGAGGAGCGCAGAAGAAATTTTAAGAGAGAGATTGTATGCTGTCCTATCTATTTGCTTGTTTGGTTCTTAGTTTGTGCGGTACTTATTTGGTATTTTCTCTCACCTTAACTTGTATTATGCAGTCGAGACAAGATCAGTTGTTGGTTAAAGCTAGACAAGAACAGGAGGTATGATGTATGATGACATTCCTTTAATGCTCTTAAAAAGATGAATATTAACATTGTTTGATCAGAAGATTTTTGGTCAGATAAGATTATGAACCCACTTGCACTTATAGATGGCATTCTATAGTATGATTAACTTGTTTTCATATATTGAGCTTCTAATTTATTTTGGTGAGGTATCATGGTTTCTTTGTGCTACTGCTTTCTCCTTTTATCAGCTTGCGGCAAAAAACGCTAGATTTGAGCAGATATGGAGAAGTAGGAAAGGGATTAAAGATGAAAAAGATGACCAGTTACGTGACGTATATCATATCTATGATATTGTTCGTCTTGATACAAATGAAATATCAAGTGAATCCCCAAAGCAGGAGTGAGTTCTACTATATTGATGTTATTCGGTCTCAATACTTTACAAAATCCTCATTTATGTGGGCAAATTTTATTTTGTTATTAGTGCAGACAAATGTCTCTGGAGGATCAGAGTATGTTATCAAGTTACTTGCCGTTACTAAGGGAGTTTATTCCAAGTGCCGCTGCTGAAATTGAATCAGATATAGATGCAAACATGATGAAACAAAATTGTAAGTTCCAATTCTTCTAGCAGTCACTTGAATTCTATGGCGTACAACTTTAGTTATGAATGATGCAACTATGATCCTATGCAATTCAACAGTAGAAAGTTGGATGAAGAGGATAATTATTATTCATCCGTTATTTGTTTTTCCAGCTATCGTCTCCTGTTCTTGCTTTGCCCAAGTTTTCTTCCTTACCTCACTCACTTTTTAGTTTCATCCATGTATTTGGGATTTTATTTTAATTCCTGTTGTAATATTTTGATATTTCATTTATATATGAAATGGTTTTTTATAAAAAAGAAAATGTAATTTCTTATTGTTATGTCTATGTCTTCACTTCTTCAGTGCCTGTAGATGATTATGTGTATGACTACTATACTGTGAAGAATGATGTGGAGATTGCTGAAGACGATGCCTCCCATCCATTTCCTTTGTGCGTCTTTCTTCCTTTTCCCCTTTCTGCTATGGTTTACACTTCATGTTTTTTTTAATCATTTCATATATTTTTTTTCAGGATACAAGTTGATGACTTAGATCATGATGGGCCTAGTGACTCAGATTATGAAACTGATGATTCAAATGGTAAAAACCAATGACCATTTCCTTCTAGTTTACAAACATAAGTTATATCTAATTTCTTTTATGCTTTTTGTCTTCTTTGGTTTCAGCTGAAAACAATCCGTGCTTCGATTACCCAGATGAGGAAGAGTTGGAGAGTACATCTTCAAATGATGAATTGGAAGATAGTGATGATGAGAAGCAGTCCTCAGAAAGTAATGATGTAGAAGAAGATGAGTTATCGGAGGAGGAGAAAGTTGAATTATATGAGGATGAAATATATGATGATTTTGATGAAGAGGATGGTGCTGATAGCTTTGATTATGATAGTAATGTTGGTCATGATGAAGGTGAAGATTGGAGATGGTCCTATCGTTGAATTTTTCACTAGAGATAGAACAAGCTTTTCATCCTTGTGAATATATATATCTTTTCTTAATTAGGATTTAGGGGAGGAATGCTTGCTATGATTAGGGATGTAATGTTGGAGATTTAGAGTCTTTTTTACTTGATTAGGGAAAAATGTTTAGATTTTTTAAAAAGCTGACTTTTATTTTATTTGGTTTTGATTGAACTTGTAAATTTTTAGTCTGTTTGGATGTCAAATATTTCAATTTCTTTTTTCTAAACGACTCATTTTTACCATTAAATACTTGAAATGTTGAACTAAATTGATTCTAGAAAATGCTATGAACTCTT

mRNA sequence

ATTCCGAAGAGGAGACCTCCGTAGTGTTAAGTCGGAGGACATTGTTATTACTCTTCTTCTTTCCTTTTTAATAAGAAAAAAAGAAGAGAAAATAAGAGAAAAGGGTAACCACGCACGCTGCCCTCTCCATTGGACTTTCGAAGTTTCTCTTCCGCTCACAATCTCTCCTTCACGCCGACGCCACCACCAGCCGGACGACGACCAGCGCGCCACGCCAGCCACCCTCAACTTTTAAATATCCTTTGCCGTCAGTCTAGGTCGGGGCTGTCCTGTGTCATTCCGTCCGTGGTCGTTGAGCCGGGCCAGCTTTGAGACGCGTCGTGTTGCTTTCTGCCTGTAGATCGTCGTAATTTGAGGTTCTTTCTTCATCATTGCTTGCCCTAACCACATTAATTGATGCCATAGTGAGGGTCGATCTGAACGATCAGGGACTGGAAAAGCAGTGGTGAAACAAGGTGTGCTTCCAATTCTAGGGAGACCGTTGAAGCCCAAAAGTATTCAGTCTTAAGGGGTCTTGCCAAAAATATTCCTCATGCTTTTAGAGAATAGAACATAAAACTATTGCCCGTCGTATGGCGCTCATTGGTGAGAGCTCTTCTTCTGTTTCCAAACTCGTGGACGAAAAGCCAGTTTTAGTTAGGGTTAAGCGCAAAGCTTCCCAATCTCGACTTGATGCATTATAGGAATTAAAGACCAAGAAGATATTTGTACAGCATGTGGAGACATTAAGAAGCTCTGATGCCACTGTTGACATTGTGCAGTCTTTTGTGTCGAGACAAGATCAGTTGTTGGTTAAAGCTAGACAAGAACAGGAGCTTGCGGCAAAAAACGCTAGATTTGAGCAGATATGGAGAAGTAGGAAAGGGATTAAAGATGAAAAAGATGACCAGTTACGTGACGTATATCATATCTATGATATTGTTCGTCTTGATACAAATGAAATATCAAGTGAATCCCCAAAGCAGGAACAAATGTCTCTGGAGGATCAGAGTATGTTATCAAGTTACTTGCCGTTACTAAGGGAGTTTATTCCAAGTGCCGCTGCTGAAATTGAATCAGATATAGATGCAAACATGATGAAACAAAATTTGCCTGTAGATGATTATGTGTATGACTACTATACTGTGAAGAATGATGTGGAGATTGCTGAAGACGATGCCTCCCATCCATTTCCTTTGATACAAGTTGATGACTTAGATCATGATGGGCCTAGTGACTCAGATTATGAAACTGATGATTCAAATGCTGAAAACAATCCGTGCTTCGATTACCCAGATGAGGAAGAGTTGGAGAGTACATCTTCAAATGATGAATTGGAAGATAGTGATGATGAGAAGCAGTCCTCAGAAAGTAATGATGTAGAAGAAGATGAGTTATCGGAGGAGGAGAAAGTTGAATTATATGAGGATGAAATATATGATGATTTTGATGAAGAGGATGGTGCTGATAGCTTTGATTATGATAGTAATGTTGGTCATGATGAAGGTGAAGATTGGAGATGGTCCTATCGTTGAATTTTTCACTAGAGATAGAACAAGCTTTTCATCCTTGTGAATATATATATCTTTTCTTAATTAGGATTTAGGGGAGGAATGCTTGCTATGATTAGGGATGTAATGTTGGAGATTTAGAGTCTTTTTTACTTGATTAGGGAAAAATGTTTAGATTTTTTAAAAAGCTGACTTTTATTTTATTTGGTTTTGATTGAACTTGTAAATTTTTAGTCTGTTTGGATGTCAAATATTTCAATTTCTTTTTTCTAAACGACTCATTTTTACCATTAAATACTTGAAATGTTGAACTAAATTGATTCTAGAAAATGCTATGAACTCTT

Coding sequence (CDS)

ATGTCTCTGGAGGATCAGAGTATGTTATCAAGTTACTTGCCGTTACTAAGGGAGTTTATTCCAAGTGCCGCTGCTGAAATTGAATCAGATATAGATGCAAACATGATGAAACAAAATTTGCCTGTAGATGATTATGTGTATGACTACTATACTGTGAAGAATGATGTGGAGATTGCTGAAGACGATGCCTCCCATCCATTTCCTTTGATACAAGTTGATGACTTAGATCATGATGGGCCTAGTGACTCAGATTATGAAACTGATGATTCAAATGCTGAAAACAATCCGTGCTTCGATTACCCAGATGAGGAAGAGTTGGAGAGTACATCTTCAAATGATGAATTGGAAGATAGTGATGATGAGAAGCAGTCCTCAGAAAGTAATGATGTAGAAGAAGATGAGTTATCGGAGGAGGAGAAAGTTGAATTATATGAGGATGAAATATATGATGATTTTGATGAAGAGGATGGTGCTGATAGCTTTGATTATGATAGTAATGTTGGTCATGATGAAGGTGAAGATTGGAGATGGTCCTATCGTTGA

Protein sequence

MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAEDDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTSSNDELEDSDDEKQSSESNDVEEDELSEEEKVELYEDEIYDDFDEEDGADSFDYDSNVGHDEGEDWRWSYR

Homology

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BLAST of CsGy7G010210 vs. NCBI nr
Match: XP_004139832.1 (PREDICTED: RNA-directed DNA methylation 4 [Cucumis sativus] >KGN44279.1 hypothetical protein Csa_7G238430 [Cucumis sativus])

HSP 1 Score: 249.6 bits (636), Expect = 8.1e-63
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE
Sbjct: 186 MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 245

Query: 61  DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX 120
           DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX
Sbjct: 246 DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX 305

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSFDYDSNVGHDEGEDWRWSYR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADSFDYDSNVGHDEGEDWRWSYR
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADSFDYDSNVGHDEGEDWRWSYR 365

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BLAST of CsGy7G010210 vs. NCBI nr
Match: XP_008447116.1 (PREDICTED: RNA-directed DNA methylation 4-like isoform X1 [Cucumis melo] >XP_008447117.1 PREDICTED: RNA-directed DNA methylation 4-like isoform X1 [Cucumis melo] >XP_016900354.1 PREDICTED: RNA-directed DNA methylation 4-like isoform X1 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 4.4e-53
Identity = 164/180 (91.11%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           MSLEDQSMLSSYLPLLREFIPSAAAEIESDID +MMKQNLPVDDYVYDYYTVK DVEI E
Sbjct: 186 MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDPSMMKQNLPVDDYVYDYYTVKTDVEIPE 245

Query: 61  DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX 120
           DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELES   XXXXXXXXX
Sbjct: 246 DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESKSSXXXXXXXXX 305

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSFDYDSNVGHDEGEDWRWSYR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SN GHD+GEDWRWSYR
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGGHDKGEDWRWSYR 365

[Close]

BLAST of CsGy7G010210 vs. NCBI nr
Match: XP_008447118.1 (PREDICTED: RNA-directed DNA methylation 4-like isoform X2 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 4.4e-53
Identity = 164/180 (91.11%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           MSLEDQSMLSSYLPLLREFIPSAAAEIESDID +MMKQNLPVDDYVYDYYTVK DVEI E
Sbjct: 184 MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDPSMMKQNLPVDDYVYDYYTVKTDVEIPE 243

Query: 61  DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX 120
           DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELES   XXXXXXXXX
Sbjct: 244 DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESKSSXXXXXXXXX 303

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSFDYDSNVGHDEGEDWRWSYR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SN GHD+GEDWRWSYR
Sbjct: 304 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGGHDKGEDWRWSYR 363

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BLAST of CsGy7G010210 vs. NCBI nr
Match: XP_022154907.1 (RNA-directed DNA methylation 4 [Momordica charantia])

HSP 1 Score: 190.3 bits (482), Expect = 5.8e-45
Identity = 140/187 (74.87%), Postives = 148/187 (79.14%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           MSLEDQSMLSSYLPLLREFIPSAAAEIESDI ANMMKQ++PVDDYVYDYYTVK+D+EIAE
Sbjct: 186 MSLEDQSMLSSYLPLLREFIPSAAAEIESDIHANMMKQDVPVDDYVYDYYTVKSDMEIAE 245

Query: 61  DDASHPFPLIQVDDLD-HDGPSDSDYETDDSNAENNPCFDYPDE------EELESTXXXX 120
           DDAS+PFPLIQVDDLD +DGP DSDYE+DDSNAENNP FDYPDE            XXXX
Sbjct: 246 DDASNPFPLIQVDDLDLYDGPDDSDYESDDSNAENNPHFDYPDEVSXXXXXXXXXXXXXX 305

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSFDYDSNVGHDEGE 180
           XXXXXXXXXXXXXXXXXXXXXXXX                    A+SFD DSN GHDEGE
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXSVDRAQLYEDEIYGDFDDDDANSFDCDSNGGHDEGE 365

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BLAST of CsGy7G010210 vs. NCBI nr
Match: XP_023522069.1 (RNA-directed DNA methylation 4 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43
Identity = 154/183 (84.15%), Postives = 165/183 (90.16%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           M+LEDQSMLSSYLPLLREFIPSAA EIESDI+AN +KQ+LPVDDYVYDYYTVKN+V IA+
Sbjct: 186 MTLEDQSMLSSYLPLLREFIPSAAEEIESDINANTLKQDLPVDDYVYDYYTVKNNVPIAD 245

Query: 61  DDASHPFPLIQVDDLD-HDGPSDSDYETDDSNAENNPCFDYPDE--EELESTXXXXXXXX 120
           DDAS+PFPLIQVDDLD +DGP DS+YE+DDSNAENNP FDYPDE        XXXXXXXX
Sbjct: 246 DDASNPFPLIQVDDLDLYDGPDDSEYESDDSNAENNPHFDYPDEXXXXXXXXXXXXXXXX 305

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSFDYDSNVGHDEGEDWRW 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   FDYDSN GH+EGEDWRW
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFDYDSNGGHEEGEDWRW 365

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BLAST of CsGy7G010210 vs. TAIR10
Match: AT2G30280.1 (RNA-directed DNA methylation 4)

HSP 1 Score: 97.1 bits (240), Expect = 1.2e-20
Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 2   SLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAED 61
           SLEDQ ML+S+LPLLRE IP+AA EIE+DI      Q+   ++YVYDYY V  +++I+ED
Sbjct: 183 SLEDQKMLASFLPLLRECIPTAAEEIEADI------QSSHTEEYVYDYYAVNEEMDISED 242

Query: 62  DASHPFPLIQVDDLDH--DGPSDSDYETDDSNAENNPCFDYP 102
            + + FPL+ V+D +   DG  +SDY+++DSNAE++P  DYP
Sbjct: 243 SSKNQFPLVIVEDEEEFCDGSDESDYDSEDSNAEDHPKTDYP 278

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BLAST of CsGy7G010210 vs. Swiss-Prot
Match: sp|Q8GYP3|RDM4_ARATH (RNA-directed DNA methylation 4 OS=Arabidopsis thaliana OX=3702 GN=RDM4 PE=1 SV=1)

HSP 1 Score: 97.1 bits (240), Expect = 2.2e-19
Identity = 53/102 (51.96%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 2   SLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAED 61
           SLEDQ ML+S+LPLLRE IP+AA EIE+DI      Q+   ++YVYDYY V  +++I+ED
Sbjct: 183 SLEDQKMLASFLPLLRECIPTAAEEIEADI------QSSHTEEYVYDYYAVNEEMDISED 242

Query: 62  DASHPFPLIQVDDLDH--DGPSDSDYETDDSNAENNPCFDYP 102
            + + FPL+ V+D +   DG  +SDY+++DSNAE++P  DYP
Sbjct: 243 SSKNQFPLVIVEDEEEFCDGSDESDYDSEDSNAEDHPKTDYP 278

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BLAST of CsGy7G010210 vs. TrEMBL
Match: tr|A0A0A0K5Q3|A0A0A0K5Q3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238430 PE=4 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 5.3e-63
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE
Sbjct: 186 MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 245

Query: 61  DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX 120
           DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX
Sbjct: 246 DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX 305

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSFDYDSNVGHDEGEDWRWSYR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ADSFDYDSNVGHDEGEDWRWSYR
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGADSFDYDSNVGHDEGEDWRWSYR 365

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BLAST of CsGy7G010210 vs. TrEMBL
Match: tr|A0A1S4DWJ0|A0A1S4DWJ0_CUCME (RNA-directed DNA methylation 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103489641 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.9e-53
Identity = 164/180 (91.11%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           MSLEDQSMLSSYLPLLREFIPSAAAEIESDID +MMKQNLPVDDYVYDYYTVK DVEI E
Sbjct: 186 MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDPSMMKQNLPVDDYVYDYYTVKTDVEIPE 245

Query: 61  DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX 120
           DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELES   XXXXXXXXX
Sbjct: 246 DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESKSSXXXXXXXXX 305

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSFDYDSNVGHDEGEDWRWSYR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SN GHD+GEDWRWSYR
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGGHDKGEDWRWSYR 365

[Close]

BLAST of CsGy7G010210 vs. TrEMBL
Match: tr|A0A1S3BG45|A0A1S3BG45_CUCME (RNA-directed DNA methylation 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103489641 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.9e-53
Identity = 164/180 (91.11%), Postives = 166/180 (92.22%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           MSLEDQSMLSSYLPLLREFIPSAAAEIESDID +MMKQNLPVDDYVYDYYTVK DVEI E
Sbjct: 184 MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDPSMMKQNLPVDDYVYDYYTVKTDVEIPE 243

Query: 61  DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESTXXXXXXXXXXX 120
           DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELES   XXXXXXXXX
Sbjct: 244 DDASHPFPLIQVDDLDHDGPSDSDYETDDSNAENNPCFDYPDEEELESKSSXXXXXXXXX 303

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADSFDYDSNVGHDEGEDWRWSYR 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       SN GHD+GEDWRWSYR
Sbjct: 304 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNGGHDKGEDWRWSYR 363

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BLAST of CsGy7G010210 vs. TrEMBL
Match: tr|A0A1S3CIA5|A0A1S3CIA5_CUCME (RNA-directed DNA methylation 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501292 PE=4 SV=1)

HSP 1 Score: 135.2 bits (339), Expect = 1.5e-28
Identity = 67/74 (90.54%), Postives = 70/74 (94.59%), Query Frame = 0


Query: 35  MMKQNLPVDDYVYDYYTVKNDVEIAEDDASHPFPLIQVDDLDHDGPSDSDYETDDSNAEN 94
           MMKQNLPVDD V DYYTVKND+EIAEDDAS+PFPL QVD+LDHD PSDSDYETDDSNAEN
Sbjct: 1   MMKQNLPVDDCVCDYYTVKNDMEIAEDDASYPFPLKQVDELDHDRPSDSDYETDDSNAEN 60

Query: 95  NPCFDYPDEEELES 109
           NPCFDYPDEEELES
Sbjct: 61  NPCFDYPDEEELES 74

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BLAST of CsGy7G010210 vs. TrEMBL
Match: tr|A0A2P4ICX8|A0A2P4ICX8_QUESU (Rna-directed dna methylation 4 OS=Quercus suber OX=58331 GN=CFP56_15104 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 4.0e-26
Identity = 65/101 (64.36%), Postives = 84/101 (83.17%), Query Frame = 0


Query: 1   MSLEDQSMLSSYLPLLREFIPSAAAEIESDIDANMMKQNLPVDDYVYDYYTVKNDVEIAE 60
           +SLED  +LSSYLPLLRE IPSAA+EIESD+ A+M KQ    DDYVYD+Y V++D++I  
Sbjct: 186 LSLEDHMLLSSYLPLLREMIPSAASEIESDLHASMSKQ--AADDYVYDFYAVRDDMDIVH 245

Query: 61  DDASHPFPLIQVDDLD-HDGPSDSDYETDDSNAENNPCFDY 101
           ++AS+PFP++QVD+ D +DGP +S+YETDDSNAENNP  DY
Sbjct: 246 EEASYPFPIVQVDEEDYYDGPDESEYETDDSNAENNPLNDY 284

The following BLAST results are available for this feature:

BLAST of CsGy7G010210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139832.1	8.1e-63	99.44	PREDICTED: RNA-directed DNA methylation 4 [Cucumis sativus] >KGN44279.1 hypothet...	[more]
XP_008447116.1	4.4e-53	91.11	PREDICTED: RNA-directed DNA methylation 4-like isoform X1 [Cucumis melo] >XP_008...	[more]
XP_008447118.1	4.4e-53	91.11	PREDICTED: RNA-directed DNA methylation 4-like isoform X2 [Cucumis melo]	[more]
XP_022154907.1	5.8e-45	74.87	RNA-directed DNA methylation 4 [Momordica charantia]	[more]
XP_023522069.1	1.1e-43	84.15	RNA-directed DNA methylation 4 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy7G010210 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G30280.1	1.2e-20	51.96	RNA-directed DNA methylation 4	[more]

BLAST of CsGy7G010210 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8GYP3\|RDM4_ARATH	2.2e-19	51.96	RNA-directed DNA methylation 4 OS=Arabidopsis thaliana OX=3702 GN=RDM4 PE=1 SV=1	[more]

BLAST of CsGy7G010210 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K5Q3\|A0A0A0K5Q3_CUCSA	5.3e-63	99.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G238430 PE=4 SV=1	[more]
tr\|A0A1S4DWJ0\|A0A1S4DWJ0_CUCME	2.9e-53	91.11	RNA-directed DNA methylation 4-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3BG45\|A0A1S3BG45_CUCME	2.9e-53	91.11	RNA-directed DNA methylation 4-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A1S3CIA5\|A0A1S3CIA5_CUCME	1.5e-28	90.54	RNA-directed DNA methylation 4 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10350129...	[more]
tr\|A0A2P4ICX8\|A0A2P4ICX8_QUESU	4.0e-26	64.36	Rna-directed dna methylation 4 OS=Quercus suber OX=58331 GN=CFP56_15104 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006342	chromatin silencing
biological_process	GO:0006306	DNA methylation
biological_process	GO:0009791	post-embryonic development
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G010210.1	CsGy7G010210.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 69..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..180
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..161
None	No IPR available	PANTHER	PTHR31934	FAMILY NOT NAMED	coord: 1..140
None	No IPR available	PANTHER	PTHR31934:SF2	RNA-DIRECTED DNA METHYLATION 4	coord: 1..140

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G010210	Csa7G238430	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G010210	MELO3C012615	Melon (DHL92) v3.5.1	cgybmeB471
CsGy7G010210	CSPI07G10850	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G010210	CsaV3_7G022840	Cucumber (Chinese Long) v3	cgybcucB347

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G010210	Cucumber (Chinese Long) v3	cgybcucB345
CsGy7G010210	Watermelon (97103) v2	cgybwmbB495
CsGy7G010210	Watermelon (97103) v2	cgybwmbB531
CsGy7G010210	Wax gourd	cgybwgoB642
CsGy7G010210	Wax gourd	cgybwgoB654
CsGy7G010210	Cucumber (Gy14) v2	cgybcgybB155
CsGy7G010210	Cucurbita maxima (Rimu)	cgybcmaB898
CsGy7G010210	Cucurbita maxima (Rimu)	cgybcmaB946
CsGy7G010210	Cucurbita maxima (Rimu)	cgybcmaB954
CsGy7G010210	Cucurbita moschata (Rifu)	cgybcmoB878
CsGy7G010210	Cucurbita moschata (Rifu)	cgybcmoB929
CsGy7G010210	Cucurbita moschata (Rifu)	cgybcmoB936
CsGy7G010210	Cucurbita pepo (Zucchini)	cgybcpeB912
CsGy7G010210	Cucurbita pepo (Zucchini)	cgybcpeB923
CsGy7G010210	Cucurbita pepo (Zucchini)	cgybcpeB965
CsGy7G010210	Cucumber (Chinese Long) v2	cgybcuB322
CsGy7G010210	Bottle gourd (USVL1VR-Ls)	cgyblsiB460
CsGy7G010210	Bottle gourd (USVL1VR-Ls)	cgyblsiB468
CsGy7G010210	Melon (DHL92) v3.5.1	cgybmeB455
CsGy7G010210	Melon (DHL92) v3.6.1	cgybmedB448
CsGy7G010210	Melon (DHL92) v3.6.1	cgybmedB468
CsGy7G010210	Watermelon (Charleston Gray)	cgybwcgB474
CsGy7G010210	Watermelon (Charleston Gray)	cgybwcgB501
CsGy7G010210	Watermelon (97103) v1	cgybwmB515
CsGy7G010210	Watermelon (97103) v1	cgybwmB560
CsGy7G010210	Wild cucumber (PI 183967)	cgybcpiB329
CsGy7G010210	Silver-seed gourd	carcgybB0355
CsGy7G010210	Silver-seed gourd	carcgybB0401
CsGy7G010210	Silver-seed gourd	carcgybB0541