CsGy7G009460 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G009460
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	1,4-alpha-glucan branching enzyme, putative
Location	Chr7 : 11916144 .. 11917157 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGTCGTCCTTCCTTCAGAATGTTCCAGACCAAGAATGGAACATGAATAAGGTTGTTTTGTATCATTTGCGGACCTGTTTGATGGATCTCAATCACTTAGAGGGTTTTCCATTTATTAAAGAGAGAGAGTTGCATTGTGCAGATTGTTAGTTCATTAATTGGCAACAGACACTCCACAAACAAGATGCTTCTGTTTGCTGAAAACCACGGCCAAGTAATTTTCTTCCTAATCTTTTTAAAATTATTAACCATCAACGGTTTAATGAATTATAAGCATGGATTCGTGGTTGCATGTCTTCCTCATCTTTTCCTTATTTCTTTATCCTTTTAGTCCATCTCTGGTGGCCGTTCATATGCAGAGATTCTGTTTGGTGATATCAAGGAGCATGGTGCTGGATCAAAGGAAACACTGTTAAGGGGGTGTTCCCTACACAAAGTACGATTCATCTCTTGAACTAAATTATTTATTTAATATTTTAGGAAATAAGTGTTCTAGTTTGCAAAAAATACTTCTAGCCTAAGAAACGGTTGCAAATACAATGACAATGTGTACTGGTTTCAATGTTAGGTTAGCCAACAGTTGGGAATTAGAATGTTGACCAAATGATATGCTGATCCCAGAACATTTTAACTAATCATCTTCAGTTTTCATTTTCGTCAACTATATTATAATACTATATAACGGAACCTCTCAATACCTGTCAAAATATATGATTCCATCCAATTTCCTTCTCATGTGTCTATACCATTTTCAGTGTTTATAGCTTGCATTCAAATGCATAAGGTCTACTAAATAGTGGAGAAAGAGTTCTACCTTCTATCATCTTCTGTCCTGGCCTACTGTTATTTAGTTTATCCATTTCTGTAATTTTTCTTTTAATGGCATTGAATCAGATGATTAGACTGATCACGTTCACTATTGGTGGACGAGCATATCTTAACTTCATGGGAAATGAATTTGGGCATCCAAAGGTCAGCTTATATCTCTTCAATATGCATGAAGATGTGTAA

mRNA sequence

ATGTGGTCGTCCTTCCTTCAGAATGTTCCAGACCAAGAATGGAACATGAATAAGATTGTTAGTTCATTAATTGGCAACAGACACTCCACAAACAAGATGCTTCTGTTTGCTGAAAACCACGGCCAATCCATCTCTGGTGGCCGTTCATATGCAGAGATTCTGTTTGGTGATATCAAGGAGCATGGTGCTGGATCAAAGGAAACACTGTTAAGGGGGTGTTCCCTACACAAAATGATTAGACTGATCACGTTCACTATTGGTGGACGAGCATATCTTAACTTCATGGGAAATGAATTTGGGCATCCAAAGGTCAGCTTATATCTCTTCAATATGCATGAAGATGTGTAA

Coding sequence (CDS)

ATGTGGTCGTCCTTCCTTCAGAATGTTCCAGACCAAGAATGGAACATGAATAAGATTGTTAGTTCATTAATTGGCAACAGACACTCCACAAACAAGATGCTTCTGTTTGCTGAAAACCACGGCCAATCCATCTCTGGTGGCCGTTCATATGCAGAGATTCTGTTTGGTGATATCAAGGAGCATGGTGCTGGATCAAAGGAAACACTGTTAAGGGGGTGTTCCCTACACAAAATGATTAGACTGATCACGTTCACTATTGGTGGACGAGCATATCTTAACTTCATGGGAAATGAATTTGGGCATCCAAAGGTCAGCTTATATCTCTTCAATATGCATGAAGATGTGTAA

Protein sequence

MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKEHGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPKVSLYLFNMHEDV

Homology

[Close]

BLAST of CsGy7G009460 vs. NCBI nr
Match: XP_004139870.1 (PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 4.8e-53
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE
Sbjct: 649 MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 708

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 709 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 751

[Close]

BLAST of CsGy7G009460 vs. NCBI nr
Match: KGN44181.1 (hypothetical protein Csa_7G213190 [Cucumis sativus])

HSP 1 Score: 216.5 bits (550), Expect = 4.8e-53
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE
Sbjct: 56  MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 115

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 116 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 158

[Close]

BLAST of CsGy7G009460 vs. NCBI nr
Match: XP_008447723.1 (PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X1 [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 2.4e-52
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENH QSISGGRSYAEILFGDIKE
Sbjct: 655 MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHSQSISGGRSYAEILFGDIKE 714

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 715 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 757

[Close]

BLAST of CsGy7G009460 vs. NCBI nr
Match: XP_008447724.1 (PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X3 [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 2.4e-52
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENH QSISGGRSYAEILFGDIKE
Sbjct: 621 MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHSQSISGGRSYAEILFGDIKE 680

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 681 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 723

[Close]

BLAST of CsGy7G009460 vs. NCBI nr
Match: XP_016900507.1 (PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X2 [Cucumis melo])

HSP 1 Score: 214.2 bits (544), Expect = 2.4e-52
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENH QSISGGRSYAEILFGDIKE
Sbjct: 655 MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHSQSISGGRSYAEILFGDIKE 714

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 715 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 757

[Close]

BLAST of CsGy7G009460 vs. TAIR10
Match: AT3G20440.2 (Alpha amylase family protein)

HSP 1 Score: 152.5 bits (384), Expect = 1.6e-37
Identity = 72/103 (69.90%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MW S L NVPD EW+M+KIVS+L+ N+   +KML +AENH QSISGGRS+AEILFG +  
Sbjct: 642 MWVSLLDNVPDNEWSMSKIVSTLVANKEYADKMLSYAENHNQSISGGRSFAEILFGGVDN 701

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
              G KE L RG SLHKMIRLITFT GGRAYLNFMGNEFGHP+
Sbjct: 702 GSPGGKELLDRGISLHKMIRLITFTSGGRAYLNFMGNEFGHPE 744

[Close]

BLAST of CsGy7G009460 vs. TAIR10
Match: AT5G03650.1 (starch branching enzyme 2.2)

HSP 1 Score: 78.6 bits (192), Expect = 2.9e-15
Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 0


Query: 11  DQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFG----DIKEHGAGSK 70
           D++W M  I+ +L  NR  + K + +AE+H Q++ G ++ A  L      D       S 
Sbjct: 545 DEDWQMGDIIYTLT-NRRWSEKCISYAESHDQALVGDKTIAFWLMDKDMYDFMAVDRPST 604

Query: 71  ETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
             + RG +LHKMIRLIT  +GG  YLNFMGNEFGHP+
Sbjct: 605 PLIDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPE 640

[Close]

BLAST of CsGy7G009460 vs. TAIR10
Match: AT2G36390.1 (starch branching enzyme 2.1)

HSP 1 Score: 74.7 bits (182), Expect = 4.1e-14
Identity = 41/97 (42.27%), Postives = 61/97 (62.89%), Query Frame = 0


Query: 11  DQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFG-DIKEHGAGSKET- 70
           D++W +  I  +L  NR    K +++AE+H Q++ G ++ A  L   D+ +  A  ++  
Sbjct: 580 DEDWQVGDITFTLT-NRRWGEKCVVYAESHDQALVGDKTIAFWLMDKDMYDFMAVDRQAT 639

Query: 71  --LLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
             + RG +LHKMIRLIT  +GG  YLNFMGNEFGHP+
Sbjct: 640 PRVDRGIALHKMIRLITMGLGGEGYLNFMGNEFGHPE 675

[Close]

BLAST of CsGy7G009460 vs. Swiss-Prot
Match: sp|D2WL32|GLGB3_ARATH (1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis thaliana OX=3702 GN=SBE3 PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 2.8e-36
Identity = 72/103 (69.90%), Postives = 82/103 (79.61%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MW S L NVPD EW+M+KIVS+L+ N+   +KML +AENH QSISGGRS+AEILFG +  
Sbjct: 642 MWVSLLDNVPDNEWSMSKIVSTLVANKEYADKMLSYAENHNQSISGGRSFAEILFGGVDN 701

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
              G KE L RG SLHKMIRLITFT GGRAYLNFMGNEFGHP+
Sbjct: 702 GSPGGKELLDRGISLHKMIRLITFTSGGRAYLNFMGNEFGHPE 744

[Close]

BLAST of CsGy7G009460 vs. Swiss-Prot
Match: sp|Q41059|GLGB2_PEA (1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic (Fragment) OS=Pisum sativum OX=3888 GN=SBEII PE=1 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 7.7e-18
Identity = 50/107 (46.73%), Postives = 67/107 (62.62%), Query Frame = 0


Query: 2   WSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKEH 61
           W  +L+N  D EW+M +I  +L  NR  T K + +AE+H QSI G ++ A +L  D + +
Sbjct: 495 WIDYLKNKKDSEWSMKEISLNLT-NRRYTEKCVSYAESHDQSIVGDKTIAFLLM-DEEMY 554

Query: 62  GAGSKETLL-----RGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
            + S  T+L     RG SLHKMI  IT  +GG  YLNFMGNEFGHP+
Sbjct: 555 SSMSCLTMLSPTIERGISLHKMIHFITLALGGEGYLNFMGNEFGHPE 599

[Close]

BLAST of CsGy7G009460 vs. Swiss-Prot
Match: sp|P30924|GLGB_SOLTU (1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum OX=4113 GN=SBE1 PE=2 SV=2)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-17
Identity = 45/106 (42.45%), Postives = 63/106 (59.43%), Query Frame = 0


Query: 2   WSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKEH 61
           W  +L+N  D++W+M ++ SSL  NR  T K + +AE+H QSI G ++ A +L       
Sbjct: 515 WIDYLKNKNDEDWSMKEVTSSLT-NRRYTEKCIAYAESHDQSIVGDKTIAFLLMDKEMYS 574

Query: 62  G----AGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           G      +   + RG +LHKMI   T  +GG  YLNFMGNEFGHP+
Sbjct: 575 GMSCLTDASPVVDRGIALHKMIHFFTMALGGEGYLNFMGNEFGHPE 619

[Close]

BLAST of CsGy7G009460 vs. Swiss-Prot
Match: sp|Q01401|GLGB_ORYSJ (1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa subsp. japonica OX=39947 GN=SBE1 PE=1 SV=2)

HSP 1 Score: 89.7 bits (221), Expect = 2.2e-17
Identity = 48/108 (44.44%), Postives = 67/108 (62.04%), Query Frame = 0


Query: 2   WSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKEH 61
           W  +L+N  D++W+M++IV +L  NR  T K + +AE+H QSI G ++ A +L    KE 
Sbjct: 495 WIDYLKNKEDRKWSMSEIVQTLT-NRRYTEKCIAYAESHDQSIVGDKTIAFLLMD--KEM 554

Query: 62  GAGSKE------TLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
             G  +      T+ RG +L KMI  IT  +GG  YLNFMGNEFGHP+
Sbjct: 555 YTGMSDLQPASPTINRGIALQKMIHFITMALGGDGYLNFMGNEFGHPE 599

[Close]

BLAST of CsGy7G009460 vs. Swiss-Prot
Match: sp|Q6EAS5|GLGB_HORSE (1,4-alpha-glucan-branching enzyme OS=Equus caballus OX=9796 GN=GBE1 PE=1 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.2e-16
Identity = 47/107 (43.93%), Postives = 63/107 (58.88%), Query Frame = 0


Query: 2   WSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKEH 61
           W   ++   D++WNM  IV +L   RH   K + +AE+H Q++ G +S A  L  D + +
Sbjct: 440 WIQLVKEFKDEDWNMGNIVYTLTNRRH-LEKCIAYAESHDQALVGDKSLAFWLM-DAEMY 499

Query: 62  GAGSKET-----LLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
              S  T     + RG  LHKMIRLIT  +GG  YLNFMGNEFGHP+
Sbjct: 500 TNMSVLTPFTPVIDRGIQLHKMIRLITHALGGEGYLNFMGNEFGHPE 544

[Close]

BLAST of CsGy7G009460 vs. TrEMBL
Match: tr|A0A0A0K8R4|A0A0A0K8R4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G213190 PE=4 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 3.2e-53
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE
Sbjct: 56  MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 115

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 116 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 158

[Close]

BLAST of CsGy7G009460 vs. TrEMBL
Match: tr|A0A1S4DX00|A0A1S4DX00_CUCME (1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490131 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENH QSISGGRSYAEILFGDIKE
Sbjct: 655 MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHSQSISGGRSYAEILFGDIKE 714

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 715 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 757

[Close]

BLAST of CsGy7G009460 vs. TrEMBL
Match: tr|A0A1S3BIZ8|A0A1S3BIZ8_CUCME (1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103490131 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENH QSISGGRSYAEILFGDIKE
Sbjct: 621 MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHSQSISGGRSYAEILFGDIKE 680

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 681 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 723

[Close]

BLAST of CsGy7G009460 vs. TrEMBL
Match: tr|A0A1S3BIP3|A0A1S3BIP3_CUCME (1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490131 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 1.6e-52
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENH QSISGGRSYAEILFGDIKE
Sbjct: 655 MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHSQSISGGRSYAEILFGDIKE 714

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK
Sbjct: 715 HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 757

[Close]

BLAST of CsGy7G009460 vs. TrEMBL
Match: tr|A0A2P2LZF6|A0A2P2LZF6_RHIMU (1 4-alpha-glucan-branching enzyme 3ic/amyloplastic isoform X1 OS=Rhizophora mucronata OX=61149 PE=4 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 2.2e-41
Identity = 79/103 (76.70%), Postives = 93/103 (90.29%), Query Frame = 0


Query: 1   MWSSFLQNVPDQEWNMNKIVSSLIGNRHSTNKMLLFAENHGQSISGGRSYAEILFGDIKE 60
           MWSSFL NVPD EW+M KIVS+L+GN+H  +KMLL+AENH QSISGG+S+AE+LFG+IK+
Sbjct: 656 MWSSFLNNVPDHEWSMTKIVSTLMGNKHCADKMLLYAENHSQSISGGQSFAEMLFGEIKD 715

Query: 61  HGAGSKETLLRGCSLHKMIRLITFTIGGRAYLNFMGNEFGHPK 104
           H  GSKE++LR CSLHKMIR+ITFTIGG AYLNFMGNEFGHPK
Sbjct: 716 HSPGSKESMLRACSLHKMIRMITFTIGGHAYLNFMGNEFGHPK 758

The following BLAST results are available for this feature:

BLAST of CsGy7G009460 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139870.1	4.8e-53	100.00	PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Cucu...	[more]
KGN44181.1	4.8e-53	100.00	hypothetical protein Csa_7G213190 [Cucumis sativus]	[more]
XP_008447723.1	2.4e-52	99.03	PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isofo...	[more]
XP_008447724.1	2.4e-52	99.03	PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isofo...	[more]
XP_016900507.1	2.4e-52	99.03	PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isofo...	[more]

BLAST of CsGy7G009460 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G20440.2	1.6e-37	69.90	Alpha amylase family protein	[more]
AT5G03650.1	2.9e-15	43.30	starch branching enzyme 2.2	[more]
AT2G36390.1	4.1e-14	42.27	starch branching enzyme 2.1	[more]

BLAST of CsGy7G009460 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|D2WL32\|GLGB3_ARATH	2.8e-36	69.90	1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic OS=Arabidopsis t...	[more]
sp\|Q41059\|GLGB2_PEA	7.7e-18	46.73	1,4-alpha-glucan-branching enzyme 1, chloroplastic/amyloplastic (Fragment) OS=Pi...	[more]
sp\|P30924\|GLGB_SOLTU	1.3e-17	42.45	1,4-alpha-glucan-branching enzyme OS=Solanum tuberosum OX=4113 GN=SBE1 PE=2 SV=2	[more]
sp\|Q01401\|GLGB_ORYSJ	2.2e-17	44.44	1,4-alpha-glucan-branching enzyme, chloroplastic/amyloplastic OS=Oryza sativa su...	[more]
sp\|Q6EAS5\|GLGB_HORSE	3.2e-16	43.93	1,4-alpha-glucan-branching enzyme OS=Equus caballus OX=9796 GN=GBE1 PE=1 SV=1	[more]

BLAST of CsGy7G009460 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K8R4\|A0A0A0K8R4_CUCSA	3.2e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G213190 PE=4 SV=1	[more]
tr\|A0A1S4DX00\|A0A1S4DX00_CUCME	1.6e-52	99.03	1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X2 OS=Cu...	[more]
tr\|A0A1S3BIZ8\|A0A1S3BIZ8_CUCME	1.6e-52	99.03	1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X3 OS=Cu...	[more]
tr\|A0A1S3BIP3\|A0A1S3BIP3_CUCME	1.6e-52	99.03	1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic isoform X1 OS=Cu...	[more]
tr\|A0A2P2LZF6\|A0A2P2LZF6_RHIMU	2.2e-41	76.70	1 4-alpha-glucan-branching enzyme 3ic/amyloplastic isoform X1 OS=Rhizophora mucr...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003844	1,4-alpha-glucan branching enzyme activity

Vocabulary: **Biological Process**
Term	Definition
GO:0005978	glycogen biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR017853	Glycoside_hydrolase_SF
IPR037439	Branching_enzy

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005978	glycogen biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003844	1,4-alpha-glucan branching enzyme activity
molecular_function	GO:0043169	cation binding
molecular_function	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G009460.1	CsGy7G009460.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.20.20.80		coord: 1..110 e-value: 1.3E-24 score: 88.7
None	No IPR available	PANTHER	PTHR43651:SF4	1,4-ALPHA-GLUCAN-BRANCHING ENZYME 3, CHLOROPLASTIC/AMYLOPLASTIC	coord: 1..104
IPR037439	1,4-alpha-glucan-branching enzyme	PANTHER	PTHR43651	FAMILY NOT NAMED	coord: 1..104
IPR017853	Glycoside hydrolase superfamily	SUPERFAMILY	SSF51445	(Trans)glycosidases	coord: 2..103

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G009460	Cla016310	Watermelon (97103) v1	cgybwmB519
CsGy7G009460	Csa7G213190	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G009460	CSPI07G09960	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G009460	Bhi09G001399	Wax gourd	cgybwgoB661

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G009460	Cucurbita maxima (Rimu)	cgybcmaB882
CsGy7G009460	Cucurbita maxima (Rimu)	cgybcmaB939
CsGy7G009460	Cucurbita moschata (Rifu)	cgybcmoB864
CsGy7G009460	Cucurbita moschata (Rifu)	cgybcmoB922
CsGy7G009460	Cucurbita pepo (Zucchini)	cgybcpeB945
CsGy7G009460	Cucurbita pepo (Zucchini)	cgybcpeB979
CsGy7G009460	Bottle gourd (USVL1VR-Ls)	cgyblsiB478
CsGy7G009460	Melon (DHL92) v3.5.1	cgybmeB472
CsGy7G009460	Melon (DHL92) v3.6.1	cgybmedB469
CsGy7G009460	Watermelon (Charleston Gray)	cgybwcgB477
CsGy7G009460	Silver-seed gourd	carcgybB0870
CsGy7G009460	Silver-seed gourd	carcgybB0893
CsGy7G009460	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G009460	Watermelon (97103) v2	cgybwmbB534