CsGy7G008840 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G008840
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	COP9 signalosome complex subunit 6a
Location	Chr7 : 10872461 .. 10880633 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTCGTCTGGCAGCGGGTTGACATTCAAGTTGCACCCCCTTGTGATTGTAAACATTTCCGATCACTACACCAGGGTTAAGTCTCAGATGAATCCTCCGTCCTTGAGCTGCTCAGCTGCATCTCCTTGCGCCCTAAGTAATGGCGCCGATGCACCCGATTCTACCGACCCTTCAACTTCTCCTCCCGCACCTAGGGTTTTCGGTTGTGTTGTTGGAGTTCAAAGGGGCCGCACGGTTGAGATCTTCAACAGCTTCGAGCTTCTTTATGACCCCAAAACTCACTCACTCGACCGCACCTTCCTTGAGAAGAAGCAAGAACTCTGTTAGTAATTTCGGACATTTCTTTTCATTTCTCTTTCTCTTTTTTGCTTTCTGTTTATTTTATTGTTTATGACGATTGAATTGAGTTGCGCTCTTGTTTGGAGCAGATAAGAAAGTTTTTCCCCACTTCTACATTTTGGGTTGGTATTCTACTGGGAGTGATGCCTTGGAGTCTGACATGCATATCCACAAGGCTGTGAGTTACCATTTAAACTGCTATCTTGGCACACAGTTGTTTACAGGATTTTTACATTCTCAAGTATACTGCGCATGTTGAATTTTTAAACGGACTCTTTATCCCTAAAGCATTTTCTTTGCACACCTGAGAATTGGGATTGCTCATTTCCGGGAGTTCTGTAATTTTCTGATAGGTTTCATTCTTTTATATTGGAGTCTTTTCGTGCTTAATTAGGGTTTGGATTCCCTTCGAGGGGCAGGATACTTTTATGTTCTTGTGTTTTCATTCTTCTCGAACTAAGCTTTGGTTTTCATTTTTTTGACCCAAATGCTAATTGAAAGATATCCAATTCTTTTGATGACAAGACAATGTTCATGAAGGAAAAAAAATGGAGGAGTACAAGGGATAAAAAGATTGTATTTACAAAAGGGACTATGATTAGATTGAAGTTTACACCTGGAGACAAAACTTTAACTTTTAGCCTTGAAACTCACACCTCCTTTCAGCCACAAGATGCTTTATCCCTTGTAAAAAACACAATGAGGCTTTAAGTCTTCATGTCTCGTGTAATGATTAGAAGAATAATGTTACCACGGTTTGAAAATATGATGAATGTATTTGTAGCATTTTTTATTAGTTTTCCTTACCAGGCATGCAGGTGTATTAGCGTTAGTTTGACTTCCAACAGCTTTTTGCCTCGAACAATCTTCTTTTTCAACTGTGATCTCTATTTATCAAGAGGGTTTAGAGAGTGACTGGCTTTGAACTAGTTCAATACTCGTTAAATGTAGATGGGATGGGAGGTCTATCTTGGAGAATAGATTTATCGTGTTGTTTGTTAAGAGTTGGATACAAAATTCAAGAACATTGTCACGAGTGAAGCCCAACGTTAACTCCAACAAATATGCTAAAGTTACATTAAGTTATAGAACAAGGTCTCATCCCTTGAATAAAAGAAATTAGTATCATTTGCGTAATGGTCTTGTCATCAATTGTAGAAATTGGAGATGTATCTGGGAGATGGGTTGTTGTGTTGTATTCATTGTTGGAGGGTGGTGGAAGATTTGTGTTAGGCCTCCAATCATTCATACGCACCAAAGAAAGGGTAAATAGGAATAAGAAAAGAATGTTAGTTCATGAAATTAGAGAGCTGGGGACCATCTGTGTTGGGTTTATGGGAGGGGTTTGGAAAATTATTTTGGGTGTGAATATTTTGGAACTCTTGATGCTTATGGGAGAGAAGAGGCAGCTCTCAAATTCTGCTGTTCTTCTTGTATCTTTACTTCTTTATTCTTAACTTGTGTTGTGTTCTTAACTCACTGGAGTGTGGAGACTATATTGTATCATCTGGATACTTCTTTCCAATCTAATATCAACATCAGATCAGTTTGTCTCTGTTATTGTCCTTGTTGGGTATTTTTTTAGTGCAGGGAACTAAATACCTAACCATTTGGATAATTTATTATGGAATTATTGTTTAGCTAAGTTAGTGTGGAACTACTTTTTGGAGGATCTGAAACTTTAGTATTTAAGTAGCCTGTCAAAAAGCTTTTAATGATGTTATGGAGGAGTTATTCCTCCATCTGTCGTTTGAGAGAATTTTTTATGGAAATTTCGGGGGGTGTGTGCCTTGTTATTGGTATTTGGGGTGAGAGAAATAACGTGGTTTTTAGGAGGATTGAGCGAGTTCTTGGATGTTTGGACCCTTGTGGAATTCATGTTTCTCTTTAAGCTTCAGTAACAAATTCCTCTTGTAATTATACACAGTGATTTATTTTGCTAGATTGAAGCTCCCTTTTATCGAGTGCTCTCATTTGTGGGCTTGGGTTTTTTATATGCTCTTGTATTCTTTACTTTTTTTTCTCAATGGAAGTTGGCTTCTATTTAAAAAAGAAAAAGGAGAGGAAGAATTATGCGAGGGAAAAGGAATTTTAAAATTTTAGTAAGTCTAAATTTTTTATTCTTTAGTGCTATAGTCTCTTTGTGTCAGGGCAGAAGAATGCTTCATTCGTAGTCCCCTATCATACCTGCTCTGAAAAATCTACTGAACACTTGAACCCAATCCTTTTCTATGAAATCCTCACTGTTCAGGGAAAAAAGAAAAAAAAAACATTAATTATCTGGCTTACCTTCGTTTGTCTCAACTAAACTCAGCATTTCTAATTTCCTATTGGGTAAAATGTTGTTCAAGTAACTCCCAATTTTCTCCAATTGCCGGGTGAAAATACAAACCAACAACAAATATTCTAGAGATGCATACCCGAGCCAGAAGGTGAATTTGTTTTAGATTTCCTTAATGGTAGAAGAATCTATATTAAAAAGGATTCTAGTTTGTCAAGGTCACTCAAAACTTTTGTAAATTGACCACTCAAATTTCTAACTTTTAGTTAGTTTTATGTATTTTTATTTTGATTGGAACTCCCTCTTTGTCGCCTTTCCAAATTAGTTAATGGTCCAAAAGTCCAGCAAACATTCAAGTGCCTTTAAAATCACAAGTTTGTGGGTTGAGAGAGCCATTGGTGATAGGTTTCACCCCTTGCTTGATAACTTATCCTTAAGGTTGTGCAAAAGGGATTTGCTACAGTTATATTTTATCCCTTTCTGCTGAGGGTTGGGTTGGGGGGGCCTGATGAAGGTAGTGTCATGCCACTCTATTAGCATTGATATTATTAAAAGCAGATGTTTTTCGCGTCTTTACAGTTTGGAAGTTTATTTATCTTCAAGAGTTCCAAATATTTTCATTTTTTATTTATCTGGCTATTATCAAGGAAAGCTCTCAAGGGATAAGACCAATCCTTGCCTAGTTTGAAATCTCAAATACCTTTTATAATTATGCTTTTTCTACAAAAAATAAATAAAAAGTCATGCTTGTTATCTAACTTTAGTTAAAACCAATTGAAGTATCTTTGTTAACTTCCAAGCCTACTTTGGGAGGATAATAACTTGTTTTATGCATTTACCTTTCAATAATGGAATTCAGTTTCTTATGGGATCAAAAGGAAATATATCATTTGATAGATGTAATTTTTTGTTTGGGATGGGAAATTATAATACTACAATTGTACGATAGTTAATTTTGATGATCTTTCTTACTTTAACAGTTGATGGATATCAATGAAAGCCCCGTCTATGTTCTTCTCAATCCTTCAATTAATCATGCCCAAAAGGATCTCCCAGTTACGATTTACGAGAGTGGTAATATGTCTTGTTTCTTTTCTTCTTAGTTACTTGGTTTTTGTCTGCAGTTCATTTTCTTCCTTATTTGGGCTACCAATAATTTTCTGTGGTTATACTATCCTTCATTTTTCATCACTACTCTAATAATGCCACTTCTTAGGTATAACATCCATGATTTCCTTAAGGGTGTATGCTAGTGCGCATAGTTTAGTTTTCATTTACTCAGGGATTGTCAAATTATTAAGCCCTGTTTTTTACCCTTTTTTAATAATCTTTGTCACATTCTACTATCACGTTGGGAAGCACCAAGAAGTCAATTTCTTTTTTCTTAGATGGTCACAAGTTCAAGGACAAGAACAAAGCTATTGGTGTTGGAGTAAGCAAAAGAGATTGGAAACTGTCCAAGCTTTGGAGAAATCTCATAGGCTGTTTGGGATCTAATTATTTTTGTAGCTTCTACCGAGAGTCTTCCAATTTTTATGAGGCTTTGCTGCCTTTCAACATTTATTTCAATGAAGTAGTTGGAAATAAATCAGGATTTTTTTAAGGATACCTCAATCATGCTAAGTTATTAAAAAGCCTTCCTTTTTTTTTGGTTGAAAGATGCTTATTACATAGCAAGCTGGGAAAATTGTGGACTTGGGAAAGCACATTGGAATGTTAGTTTTCATCGTTTGTTGACTGATGGGGAAACAATCTTGGCCATTTCTCTTCTCTCTTTGATAGGAGAGTTTGTCTTTTGGGAGAAAGGATGCTTTTTTTTTTTGAAATGGAAACGGATATCTTTATTAATATACAAGAGAGACAAGAGCTCAAGTACAAGAGGATTATACAAGAGCTATCAAAAAATTAGGGATCAACAGTTGCACTCGGATATCTTAACTAGGGTGACATCCCATAGCGACCTCATCATATCCAGAAGAACAAAAGCAAAAAGGAGAAAACAATCTTAATACTAACCCATGATAATGGATCTTTACTAGGTCATGACTAATAGAGTTTAGTGCAAAGAAAAGTAACCATAAGAAAGAGAAGAGTGAGAAAAAAACAGAATAAAATAAGAGCAACAGAATTAGGTTGGAAAAATAAAAGCTCTCCAATTTAAGTTGAGATCTTCATCTTGTAGCTTCCGGAAAGATTTGAGATGGTGCACCAGAAGGAGGCATTTCTGTGTGCTATATCAAAATGATCAAAACAGCCTAATGATTTATCATGAAAAACTTTTTGGTTCCTTTCAAACCAAATTTCTGACAAGATAGCTTTCACTGCATTTTCCTAGAGTAGTGTAGCTTCTTTATTCAAGCTGAAGTCTCTTAATAAAACCCTCACATTTTCACCAAAATCTGCTCCAAAGACCCAAGATAGATTAAACTCTTTAAACAGTTTTCCCCAACTGAGGATGGTGTTTCAGAAGTATTAATTCATTGGGAACATGGCTCACCAATCGATGCAATATGGGAACTAGTTTCAGTGATCAACGATCAATTGCTGAATTCCACCTTGAGGACGAGGTGGTTTAGGGTTTAGAGGACGAGGTGGCTCTTTAGGGGGCAGGTAATGATAGGGCCTTGGTCACAAAAGTATATGTAAGGAAGCACACAAAGAAGGGAGGGGATAATATATAAGGGGTAATGTTAGTTTGTGTATGTGGGCCCAAAGGAATATTGTTTGTTAGGGGTCCTCTAGTGAGTCGTTATATAGGGAGTTTGCGTGGAGTAGGGTATTGAAAATGTTGCTAATTGTAATTGTTGTTATTTGAGACCTTGGAGAGTAAGGGAGTTCTCAAATCTTCCCTTGAGCTGTTTTAATTGATAGGTTGAGGCCTATTGTAAACTTCCCAGAGGCATATTTTTTTTCACTTAAGGCAATCATGACTACCTTGAAGTACCTAAGAATTTAAGATTTGGAAAATCACGACCTTATCACTCATCTCTCTTACAAAAAATTTCTATGGCGCCAAATCCCGTGTAGCTAGAATCACACCAACACTCCACATTCTCAATGTTCTTTTTAAAGAAATGGTAAGGATGTTGGGAAATTTCTGTGCTGGATTGAGGATCAGACCAACTATTCACTCTGACTCCGATCCTTTTCCCATCACCTATGACAAACTCAGTGAATTTAGAGAACTTCTCTTTATGCTTAAAAATGCTGTTCCAAATTCTAGACATTCCCTTAGGCAAATTTGAACTCCAGCCATAGACATCGACACCATGGATAGCGTCAATTATGCGTCTCCCAAGTCCCAAGAGCATTTTTTTCATGTCAAAACCTTCAAAGCCATTCCATAAGGAGAGCAATGTTCTTTTGACGAAGGGACCCAATCCCAAGGACACCCTAGATAGTAGGAAGAGTGGCCATATTCCAGTTAACAAGGTGGGAGGTAGTGTCGCAGGTCCCATCATCCCAAACAAAGTCTATAATGATCTCCAGCCAATTTTGTTTGGAGCTTGCACAAGGGAGAAGAAATAGCATGGAAGACGATTGAGGACTAATTGGGATAGAGTCAATCTACCGGCTGCCTCCTTTATAGAGAGATACCCTTCTCCTTTTGTCCTCAAAAGTTTTCCAAACTTCCACAGCATTGTGTTTTCTTCCCATAGGAAAGCCCAAATACATGAATGTGAGTGTTTCCACCTTACACCCAAAGTTTGTGGCAGTAAGCTCGACTTCAGGTTGATTCAATGAGAGAAGTTTAAGAGATATTAAGAGATAACCTCGAACCCAAAAGAAAGAGGTTGACAACGGTCCACCAAGCCAAGAGGTTGCCATCCTCCCAAGAGCAGAGAAGAAGAGTGTCATCAGGATAATGGAGATAGGTTAATTCAGAGGTCATATTGCCAAAAGAGAGGCCTCTGATAATATTGGAATGTTGGTGATATGGAATTTGTTTTTTTCTGGCTATGTAAAATTCTTAAGTTTTTGAGAGTTTCAGAATTTGTTATTCCAGTCAGTAAAGAAATGTATAAATGCAAGTGTACAAGAGTGAACAAAAAAGAAAATGGCGTAAAAGGAAAATATAACAAATATATAATAAAATATCTCTTATATTAGAACTATAACATGCTATACTACTACTAGAAAATATTTGCAAACTAAATCACGAGGTCTTTTTAGATCTCTGGCTTACTAATTTGTTGCACTAATCACTCGGTCCACCCAATTTTACCTTGTTTTTTCATCTCATTCTCAATTTGTCACATGCATATGATAGCATGTGGCATGTCACAACGTTTTGCCCAGTCATATGGTATTTACTATCTAAATTAATCTGATAAATAGACTTAAATAGATTTTGATATAGAGGGGACATGTGACATAATTCAGTGTACAAATTATTTAAGTTTGGACCTTAGAAAGGTACTTTAACCAAAATGACTTTGAAGGGTGTTTGTCATGGAGTGACCTAAGTGGATGGTAGTTTTTGTTTTTGGAACCTCAATGAAATTTACCTGTCTTCCTCTTAATGCGTTCATTAAACGTGAATGGTAAAGTATTTCATCGAAACATACTTTTTACCACGATAATGCCACAGTAAAATTCCACTACACAGAGATTGTTTGCATGGTGGTATTAACTCTTTCTTTTTGTTTGTGGTTTTTACAACTATATAGAGCTACATGTTATTGAAGGTATCCCCCAGCTAATTTTTGTTCGCTCAAGTTACACTATTGAGGTCTGTTCGCTCTGTCGCTCCTTGAGTCCTTCAAACTTGTTGCGATTCTGGTTATTGAGTTTCTCACACATTTTTCTCATTTTACTTTTCAAAGACAGTAGAAGCTGAGCGAATTTCTGTTGATCATGTTGCACATTTGAAACCATCTGATGGAGGCTCTGCTGCTACTCAACGTGAGTGGTCCTATACCTCTATTTATATCAATATGGGGTTTACCTTGTTAGTACTTATTGCGAGAAAGGAGAATATTATGCTTTGATATGTATATATGTTTATAATGAGAGAAACTTTGTCTTGAATGCAGTGGCTGCTCACCTTGCGGGAATTCACAGTGCCATCAAAATGTTGAATAGCAGGATCAGGATACTTCACAGTTATCTTCTGGCAATGCAAAATGGTACTTCAATTCTTCACTATTCATCAAAGTGTTTATGATGAAATGGTTTAGAGTATACAAAGGAGGGTGGTTATTGGCTTTCTTTTAATCAGTTCTGATCGGGCTCTGACTGCTGATCATTCATCAAGTTATAGCTGCTACATTTAGTGGTTTCTGATAGGCTTGTGAATTGTTCATGTGAACTTCTGATTAAATTGCTCAATTTGAGACTGATTTTCTCTCTCTGTTATTCTTTGAATTAGGTGATATTCCCTTGGAGAATTCCTTACTAAGACAAGTGTCAAGTTTGATCAGAAGATTGCCGGTAACTGAGTCAGGAAAGTTTCAAGACGATTTCTTGATGGTGAGTGCACTTGCATGCCATTTTCCTTACCCAGTTTCTTCTGCAGTTCAAAAACTTAAATGTTTACACATTTTATGA

mRNA sequence

ATGGCGTCGTCTGGCAGCGGGTTGACATTCAAGTTGCACCCCCTTGTGATTGTAAACATTTCCGATCACTACACCAGGGTTAAGTCTCAGATGAATCCTCCGTCCTTGAGCTGCTCAGCTGCATCTCCTTGCGCCCTAAGTAATGGCGCCGATGCACCCGATTCTACCGACCCTTCAACTTCTCCTCCCGCACCTAGGGTTTTCGGTTGTGTTGTTGGAGTTCAAAGGGGCCGCACGGTTGAGATCTTCAACAGCTTCGAGCTTCTTTATGACCCCAAAACTCACTCACTCGACCGCACCTTCCTTGAGAAGAAGCAAGAACTCTATAAGAAAGTTTTTCCCCACTTCTACATTTTGGGTTGGTATTCTACTGGGAGTGATGCCTTGGAGTCTGACATGCATATCCACAAGGCTTTGATGGATATCAATGAAAGCCCCGTCTATGTTCTTCTCAATCCTTCAATTAATCATGCCCAAAAGGATCTCCCAGTTACGATTTACGAGAGTGTAGAAGCTGAGCGAATTTCTGTTGATCATGTTGCACATTTGAAACCATCTGATGGAGGCTCTGCTGCTACTCAACTGGCTGCTCACCTTGCGGGAATTCACAGTGCCATCAAAATGTTGAATAGCAGGATCAGGATACTTCACAGTTATCTTCTGGCAATGCAAAATGGTACTTCAATTCTTCACTATTCATCAAATTCTGATCGGGCTCTGACTGCTGATCATTCATCAAGTGATATTCCCTTGGAGAATTCCTTACTAAGACAAGTGTCAAGTTTGATCAGAAGATTGCCGGTAACTGAGTCAGGAAAGTTTCAAGACGATTTCTTGATGGTGAGTGCACTTGCATGCCATTTTCCTTACCCAGTTTCTTCTGCAGTTCAAAAACTTAAATGTTTACACATTTTATGA

Coding sequence (CDS)

ATGGCGTCGTCTGGCAGCGGGTTGACATTCAAGTTGCACCCCCTTGTGATTGTAAACATTTCCGATCACTACACCAGGGTTAAGTCTCAGATGAATCCTCCGTCCTTGAGCTGCTCAGCTGCATCTCCTTGCGCCCTAAGTAATGGCGCCGATGCACCCGATTCTACCGACCCTTCAACTTCTCCTCCCGCACCTAGGGTTTTCGGTTGTGTTGTTGGAGTTCAAAGGGGCCGCACGGTTGAGATCTTCAACAGCTTCGAGCTTCTTTATGACCCCAAAACTCACTCACTCGACCGCACCTTCCTTGAGAAGAAGCAAGAACTCTATAAGAAAGTTTTTCCCCACTTCTACATTTTGGGTTGGTATTCTACTGGGAGTGATGCCTTGGAGTCTGACATGCATATCCACAAGGCTTTGATGGATATCAATGAAAGCCCCGTCTATGTTCTTCTCAATCCTTCAATTAATCATGCCCAAAAGGATCTCCCAGTTACGATTTACGAGAGTGTAGAAGCTGAGCGAATTTCTGTTGATCATGTTGCACATTTGAAACCATCTGATGGAGGCTCTGCTGCTACTCAACTGGCTGCTCACCTTGCGGGAATTCACAGTGCCATCAAAATGTTGAATAGCAGGATCAGGATACTTCACAGTTATCTTCTGGCAATGCAAAATGGTACTTCAATTCTTCACTATTCATCAAATTCTGATCGGGCTCTGACTGCTGATCATTCATCAAGTGATATTCCCTTGGAGAATTCCTTACTAAGACAAGTGTCAAGTTTGATCAGAAGATTGCCGGTAACTGAGTCAGGAAAGTTTCAAGACGATTTCTTGATGGTGAGTGCACTTGCATGCCATTTTCCTTACCCAGTTTCTTCTGCAGTTCAAAAACTTAAATGTTTACACATTTTATGA

Protein sequence

MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPSTSPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDFLMVSALACHFPYPVSSAVQKLKCLHIL

Homology

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BLAST of CsGy7G008840 vs. NCBI nr
Match: XP_004139760.1 (PREDICTED: COP9 signalosome complex subunit 6a [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 3.5e-127
Identity = 248/302 (82.12%), Postives = 248/302 (82.12%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60

Query: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES----------- 180
           WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES           
Sbjct: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 -----------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
                      VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSR      
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRXXXXXX 240

Query: 241 YLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281
                QNG                     DIPLENSLLRQVSSLIRRLPVTESGKFQDDF
Sbjct: 241 XXXXXQNG---------------------DIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281

[Close]

BLAST of CsGy7G008840 vs. NCBI nr
Match: KGN44094.1 (hypothetical protein Csa_7G184650 [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 3.5e-127
Identity = 248/302 (82.12%), Postives = 248/302 (82.12%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60

Query: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES----------- 180
           WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES           
Sbjct: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 -----------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
                      VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSR      
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRXXXXXX 240

Query: 241 YLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281
                QNG                     DIPLENSLLRQVSSLIRRLPVTESGKFQDDF
Sbjct: 241 XXXXXQNG---------------------DIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281

[Close]

BLAST of CsGy7G008840 vs. NCBI nr
Match: XP_008447803.1 (PREDICTED: COP9 signalosome complex subunit 6a [Cucumis melo] >XP_008447804.1 PREDICTED: COP9 signalosome complex subunit 6a [Cucumis melo])

HSP 1 Score: 457.6 bits (1176), Expect = 3.3e-125
Identity = 244/302 (80.79%), Postives = 245/302 (81.13%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSL+CSA SPCALSNGADAPDS DPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLTCSAPSPCALSNGADAPDSADPST 60

Query: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPP PRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPTPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES----------- 180
           WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES           
Sbjct: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 -----------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
                      VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSR      
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRXXXXXX 240

Query: 241 YLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281
                QNG                     DIPLENSLLRQVSSLIRRLPVTESGKFQDDF
Sbjct: 241 XXXXXQNG---------------------DIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281

[Close]

BLAST of CsGy7G008840 vs. NCBI nr
Match: KVI02393.1 (JAB1/Mov34/MPN/PAD-1, partial [Cynara cardunculus var. scolymus])

HSP 1 Score: 399.4 bits (1025), Expect = 1.1e-107
Identity = 213/282 (75.53%), Postives = 227/282 (80.50%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASS SGLTFKLHPLVIVNISDH+TRVKSQ  PP+           +NG  +  ++  S 
Sbjct: 48  MASSSSGLTFKLHPLVIVNISDHHTRVKSQSQPPT-----------ANGFASDATSASSN 107

Query: 61  SPP--APRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYI 120
           SPP  +PRVFGCV+GVQRGRTVEIFNSFELLYDP THSLDR+FLEKKQELYKKVFP+FYI
Sbjct: 108 SPPLSSPRVFGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYI 167

Query: 121 LGWYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESVEAERISVD 180
           LGWYST +DA ESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESVEAERISVD
Sbjct: 168 LGWYSTSADAEESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESVEAERISVD 227

Query: 181 HVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYLLAMQNGTSILHYSSNSDR 240
           HVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+LH YL AMQ G            
Sbjct: 228 HVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLNAMQKG------------ 287

Query: 241 ALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDFLM 281
                    +IP ENSLLRQVSSL+RRLP  ES KFQDDFLM
Sbjct: 288 ---------EIPYENSLLRQVSSLLRRLPAIESEKFQDDFLM 297

[Close]

BLAST of CsGy7G008840 vs. NCBI nr
Match: XP_010063203.1 (PREDICTED: COP9 signalosome complex subunit 6a [Eucalyptus grandis])

HSP 1 Score: 392.9 bits (1008), Expect = 1.0e-105
Identity = 212/302 (70.20%), Postives = 227/302 (75.17%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASS SGLTFKLHPLVI+NISDHYTRVKSQ++PP  +   A   A      AP + DP  
Sbjct: 1   MASSSSGLTFKLHPLVILNISDHYTRVKSQLHPPPSAHHCAPAAADPFAPPAPAAADP-- 60

Query: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
               PRV+GCV+GVQRGRTVEIFNSFELLYDP THSLDR FL+KKQELYKKVFP+FY+LG
Sbjct: 61  ----PRVYGCVIGVQRGRTVEIFNSFELLYDPATHSLDRAFLDKKQELYKKVFPNFYVLG 120

Query: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES----------- 180
           WYSTGSDA ESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES           
Sbjct: 121 WYSTGSDAEESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIDGIPQL 180

Query: 181 -----------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
                      VEAERISVDHVAHLKPSDGG+AATQLAAHL GIHSAIKMLNSR+R+LH 
Sbjct: 181 IFVRASYTIETVEAERISVDHVAHLKPSDGGTAATQLAAHLTGIHSAIKMLNSRVRVLHH 240

Query: 241 YLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281
           YLLAMQ G                     +IP ENSLLRQVSSL+RRLP  ESGKFQDDF
Sbjct: 241 YLLAMQKG---------------------EIPCENSLLRQVSSLLRRLPAIESGKFQDDF 275

[Close]

BLAST of CsGy7G008840 vs. TAIR10
Match: AT5G56280.1 (COP9 signalosome subunit 6A)

HSP 1 Score: 364.8 bits (935), Expect = 5.3e-101
Identity = 201/300 (67.00%), Postives = 220/300 (73.33%), Query Frame = 0


Query: 3   SSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPSTSP 62
           SS SGLTFKLHPLVIVNISDHYTRVK+Q+NPP      AS CA  +G++  ++       
Sbjct: 4   SSSSGLTFKLHPLVIVNISDHYTRVKTQLNPP------ASICASGHGSNNGEAMFQQN-- 63

Query: 63  PAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWY 122
             PRV+GCV+GVQRGRTVEIFNSFELLYDP T +LDR+FLEKKQELYKKVFP FYILGWY
Sbjct: 64  --PRVYGCVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWY 123

Query: 123 STGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES------------- 182
           STGSDA ESDMHIHKALMDINESPVYVLLNP+INH QKDLPVTIYES             
Sbjct: 124 STGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGIPQLIF 183

Query: 183 ---------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 242
                    VEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+L+  L
Sbjct: 184 AHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNL 243

Query: 243 LAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDFLM 281
            AMQ G                     D   +NS+LRQVSSL+RRLP  ES +FQD+FLM
Sbjct: 244 AAMQKG---------------------DKSCDNSVLRQVSSLLRRLPAMESERFQDNFLM 272

[Close]

BLAST of CsGy7G008840 vs. TAIR10
Match: AT4G26430.1 (COP9 signalosome subunit 6B)

HSP 1 Score: 361.3 bits (926), Expect = 5.8e-100
Identity = 195/300 (65.00%), Postives = 222/300 (74.00%), Query Frame = 0


Query: 3   SSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPSTSP 62
           SS SGLTFKLHPLV++NISDH+TRVK+Q+NPP+ SC+  +    SN ADA    +     
Sbjct: 4   SSSSGLTFKLHPLVMLNISDHFTRVKTQLNPPAASCATGNG---SNNADAMLLQN----- 63

Query: 63  PAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWY 122
             PRV+GCV+G+QRGRTVEIFNSFEL++DP   +LDR+FLEKKQELYKKVFP FY+LGWY
Sbjct: 64  --PRVYGCVIGLQRGRTVEIFNSFELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWY 123

Query: 123 STGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES------------- 182
           STGSDA ESDMHIHKALMDINESPVYVLLNP+INHAQKDLPVTIYES             
Sbjct: 124 STGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGIPQSIF 183

Query: 183 ---------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 242
                    VEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+L+ ++
Sbjct: 184 VHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHI 243

Query: 243 LAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDFLM 281
           +AMQ G                     D P ENS+LRQVSSL+R LP  ES KF ++FLM
Sbjct: 244 VAMQKG---------------------DKPCENSVLRQVSSLLRSLPAAESEKFNENFLM 272

[Close]

BLAST of CsGy7G008840 vs. Swiss-Prot
Match: sp|Q8W206|CSN6A_ARATH (COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana OX=3702 GN=CSN6A PE=1 SV=2)

HSP 1 Score: 364.8 bits (935), Expect = 9.5e-100
Identity = 201/300 (67.00%), Postives = 220/300 (73.33%), Query Frame = 0


Query: 3   SSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPSTSP 62
           SS SGLTFKLHPLVIVNISDHYTRVK+Q+NPP      AS CA  +G++  ++       
Sbjct: 4   SSSSGLTFKLHPLVIVNISDHYTRVKTQLNPP------ASICASGHGSNNGEAMFQQN-- 63

Query: 63  PAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWY 122
             PRV+GCV+GVQRGRTVEIFNSFELLYDP T +LDR+FLEKKQELYKKVFP FYILGWY
Sbjct: 64  --PRVYGCVIGVQRGRTVEIFNSFELLYDPSTQTLDRSFLEKKQELYKKVFPDFYILGWY 123

Query: 123 STGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES------------- 182
           STGSDA ESDMHIHKALMDINESPVYVLLNP+INH QKDLPVTIYES             
Sbjct: 124 STGSDAEESDMHIHKALMDINESPVYVLLNPAINHTQKDLPVTIYESELHVIDGIPQLIF 183

Query: 183 ---------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 242
                    VEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+L+  L
Sbjct: 184 AHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQNL 243

Query: 243 LAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDFLM 281
            AMQ G                     D   +NS+LRQVSSL+RRLP  ES +FQD+FLM
Sbjct: 244 AAMQKG---------------------DKSCDNSVLRQVSSLLRRLPAMESERFQDNFLM 272

[Close]

BLAST of CsGy7G008840 vs. Swiss-Prot
Match: sp|Q8W1P0|CSN6B_ARATH (COP9 signalosome complex subunit 6b OS=Arabidopsis thaliana OX=3702 GN=CSN6B PE=1 SV=2)

HSP 1 Score: 361.3 bits (926), Expect = 1.1e-98
Identity = 195/300 (65.00%), Postives = 222/300 (74.00%), Query Frame = 0


Query: 3   SSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPSTSP 62
           SS SGLTFKLHPLV++NISDH+TRVK+Q+NPP+ SC+  +    SN ADA    +     
Sbjct: 4   SSSSGLTFKLHPLVMLNISDHFTRVKTQLNPPAASCATGNG---SNNADAMLLQN----- 63

Query: 63  PAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILGWY 122
             PRV+GCV+G+QRGRTVEIFNSFEL++DP   +LDR+FLEKKQELYKKVFP FY+LGWY
Sbjct: 64  --PRVYGCVIGLQRGRTVEIFNSFELIFDPALDTLDRSFLEKKQELYKKVFPDFYVLGWY 123

Query: 123 STGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES------------- 182
           STGSDA ESDMHIHKALMDINESPVYVLLNP+INHAQKDLPVTIYES             
Sbjct: 124 STGSDATESDMHIHKALMDINESPVYVLLNPAINHAQKDLPVTIYESEFHVIDGIPQSIF 183

Query: 183 ---------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYL 242
                    VEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+L+ ++
Sbjct: 184 VHTSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLYQHI 243

Query: 243 LAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDFLM 281
           +AMQ G                     D P ENS+LRQVSSL+R LP  ES KF ++FLM
Sbjct: 244 VAMQKG---------------------DKPCENSVLRQVSSLLRSLPAAESEKFNENFLM 272

[Close]

BLAST of CsGy7G008840 vs. Swiss-Prot
Match: sp|Q6NUC2|CSN6_XENLA (COP9 signalosome complex subunit 6 OS=Xenopus laevis OX=8355 GN=cops6 PE=2 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.6e-38
Identity = 104/303 (34.32%), Postives = 153/303 (50.50%), Query Frame = 0


Query: 1   MASSGSG-LTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPS 60
           MA   +G +T  LHPLVI+NISDH+ R++SQ   P                         
Sbjct: 22  MAQGVTGSVTVALHPLVILNISDHWIRMRSQEGRPM------------------------ 81

Query: 61  TSPPAPRVFGCVVGVQRGRTVEIFNSFELL--YDPKTHSLDRTFLEKKQELYKKVFPHFY 120
                 +V G ++G Q GR +E+ NSFELL   + +  ++++ +   K+E +K+VF    
Sbjct: 82  ------QVIGALIGKQEGRNIEVMNSFELLSQINDEKITINKEYYYTKEEQFKQVFKDME 141

Query: 121 ILGWYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESV------- 180
            LGWY+TG     SD+H+HK + +I ESP+++ LNP   H   DLPV++YESV       
Sbjct: 142 FLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHT--DLPVSVYESVIDIVNGE 201

Query: 181 ---------------EAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRI 240
                          EAERI VDHVA +  +  G  +T +A HL   HSAIKML+SR+R+
Sbjct: 202 ATMLLAELSYTLATEEAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVRL 261

Query: 241 LHSYLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQ 279
           +  Y+ A + G                     ++P  + +LR+ S+L   LPV  + KF+
Sbjct: 262 ILEYVRAAEGG---------------------EVPFNHEILREASALCHCLPVLSTDKFK 270

[Close]

BLAST of CsGy7G008840 vs. Swiss-Prot
Match: sp|Q07G98|CSN6_XENTR (COP9 signalosome complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=cops6 PE=2 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.1e-38
Identity = 104/303 (34.32%), Postives = 153/303 (50.50%), Query Frame = 0


Query: 1   MASSGSG-LTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPS 60
           MA   +G +T  LHPLVI+NISDH+ R++SQ   P                         
Sbjct: 23  MAQGVTGSVTVALHPLVILNISDHWIRMRSQEGRP------------------------- 82

Query: 61  TSPPAPRVFGCVVGVQRGRTVEIFNSFELL--YDPKTHSLDRTFLEKKQELYKKVFPHFY 120
                 +V G ++G Q GR +E+ NSFELL   + +  ++++ +   K+E +K+VF    
Sbjct: 83  -----VQVIGALIGKQEGRNIEVMNSFELLSQINEEKITINKEYYYTKEEQFKQVFKDME 142

Query: 121 ILGWYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESV------- 180
            LGWY+TG     SD+H+HK + +I ESP+++ LNP   H   DLPV++YESV       
Sbjct: 143 FLGWYTTGGTPDPSDIHVHKQVCEIIESPLFLKLNPMTKHT--DLPVSVYESVIDIVNGE 202

Query: 181 ---------------EAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRI 240
                          EAERI VDHVA +  +  G  +T +A HL   HSAIKML+SR+R+
Sbjct: 203 ATMLLAELSYTLATEEAERIGVDHVARMTATGSGENST-VAEHLIAQHSAIKMLHSRVRL 262

Query: 241 LHSYLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQ 279
           +  Y+ A + G                     ++P  + +LR+ S+L   LPV  + KF+
Sbjct: 263 ILEYVRAAEAG---------------------EVPFNHEILREASALCHCLPVLSTDKFK 271

[Close]

BLAST of CsGy7G008840 vs. Swiss-Prot
Match: sp|Q54C92|CSN6_DICDI (COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum OX=44689 GN=csn6 PE=1 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.8e-37
Identity = 107/302 (35.43%), Postives = 154/302 (50.99%), Query Frame = 0


Query: 2   ASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPSTS 61
           +++ SGL   LHPLV++NISDH+TR K Q N    +C                       
Sbjct: 20  SANSSGLEVDLHPLVLINISDHFTRTKVQSNYQD-NC----------------------- 79

Query: 62  PPAPRVFGCVVGVQRGRTVEIFNSFELLYD--PKTHSLDRTFLEKKQELYKKVFPHFYIL 121
               RV G ++GVQ GR VEI NSFE++Y    K   LD  +L KK   Y+++FP + +L
Sbjct: 80  ----RVIGVILGVQNGRNVEICNSFEMVYATVDKQLVLDIEYLRKK---YEQLFPLYDLL 139

Query: 122 GWYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESV--------- 181
           GWYSTGS   + D+ +HK + + NESP+Y++L+   +   KDLPV IYES          
Sbjct: 140 GWYSTGSQVSKDDILLHKQISEHNESPLYLMLDTD-SPKSKDLPVIIYESELHIVNDEPT 199

Query: 182 -------------EAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILH 241
                        EAERI V+H+A + PS  GS  + L +HL  +H+AI MLN R++ L 
Sbjct: 200 TIFVKTPYKIQTGEAERIGVNHIAKVTPS--GSEGSGLTSHLFTMHNAISMLNIRVKALS 259

Query: 242 SYLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDD 280
            YL A++                        +P E ++LR+ SSL  +LP  ++  F+  
Sbjct: 260 DYLQAVK---------------------EKRLPYEQNILRKASSLCNQLPTIDTHDFKKS 266

[Close]

BLAST of CsGy7G008840 vs. TrEMBL
Match: tr|A0A0A0K584|A0A0A0K584_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G184650 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 2.3e-127
Identity = 248/302 (82.12%), Postives = 248/302 (82.12%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60

Query: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES----------- 180
           WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES           
Sbjct: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 -----------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
                      VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSR      
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRXXXXXX 240

Query: 241 YLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281
                QNG                     DIPLENSLLRQVSSLIRRLPVTESGKFQDDF
Sbjct: 241 XXXXXQNG---------------------DIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281

[Close]

BLAST of CsGy7G008840 vs. TrEMBL
Match: tr|A0A1S3BI92|A0A1S3BI92_CUCME (COP9 signalosome complex subunit 6a OS=Cucumis melo OX=3656 GN=LOC103490191 PE=4 SV=1)

HSP 1 Score: 457.6 bits (1176), Expect = 2.2e-125
Identity = 244/302 (80.79%), Postives = 245/302 (81.13%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSL+CSA SPCALSNGADAPDS DPST
Sbjct: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLTCSAPSPCALSNGADAPDSADPST 60

Query: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
           SPP PRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG
Sbjct: 61  SPPTPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120

Query: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES----------- 180
           WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES           
Sbjct: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIEGIPQL 180

Query: 181 -----------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
                      VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSR      
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRXXXXXX 240

Query: 241 YLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281
                QNG                     DIPLENSLLRQVSSLIRRLPVTESGKFQDDF
Sbjct: 241 XXXXXQNG---------------------DIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281

[Close]

BLAST of CsGy7G008840 vs. TrEMBL
Match: tr|A0A103Y4J1|A0A103Y4J1_CYNCS (JAB1/Mov34/MPN/PAD-1 (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=Ccrd_019342 PE=4 SV=1)

HSP 1 Score: 399.4 bits (1025), Expect = 7.1e-108
Identity = 213/282 (75.53%), Postives = 227/282 (80.50%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASS SGLTFKLHPLVIVNISDH+TRVKSQ  PP+           +NG  +  ++  S 
Sbjct: 48  MASSSSGLTFKLHPLVIVNISDHHTRVKSQSQPPT-----------ANGFASDATSASSN 107

Query: 61  SPP--APRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYI 120
           SPP  +PRVFGCV+GVQRGRTVEIFNSFELLYDP THSLDR+FLEKKQELYKKVFP+FYI
Sbjct: 108 SPPLSSPRVFGCVIGVQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYI 167

Query: 121 LGWYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESVEAERISVD 180
           LGWYST +DA ESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESVEAERISVD
Sbjct: 168 LGWYSTSADAEESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESVEAERISVD 227

Query: 181 HVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHSYLLAMQNGTSILHYSSNSDR 240
           HVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+LH YL AMQ G            
Sbjct: 228 HVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLNAMQKG------------ 287

Query: 241 ALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDFLM 281
                    +IP ENSLLRQVSSL+RRLP  ES KFQDDFLM
Sbjct: 288 ---------EIPYENSLLRQVSSLLRRLPAIESEKFQDDFLM 297

[Close]

BLAST of CsGy7G008840 vs. TrEMBL
Match: tr|A0A200Q119|A0A200Q119_9MAGN (JAB/MPN domain OS=Macleaya cordata OX=56857 GN=BVC80_1501g13 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.9e-105
Identity = 214/302 (70.86%), Postives = 227/302 (75.17%), Query Frame = 0


Query: 1   MASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPST 60
           MASS SGLTFKLHPLVIVNISDHYTRVKSQ +P  +S         +NGA     T PS 
Sbjct: 1   MASSSSGLTFKLHPLVIVNISDHYTRVKSQAHPAHVS---------NNGA----VTSPSP 60

Query: 61  SPPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYILG 120
            PP+PRVFGCV+G+QRGRTVEIFNSFELLYDP T SLDR FLEKKQELYKKVFP+FYILG
Sbjct: 61  PPPSPRVFGCVIGIQRGRTVEIFNSFELLYDPSTDSLDRAFLEKKQELYKKVFPNFYILG 120

Query: 121 WYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES----------- 180
           WYSTGSDA ESDM IHKALMDINESPVYVLLNP+I+HAQKDLPVTIYES           
Sbjct: 121 WYSTGSDAQESDMQIHKALMDINESPVYVLLNPAISHAQKDLPVTIYESELHVIDGIPQL 180

Query: 181 -----------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILHS 240
                      VEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+LH 
Sbjct: 181 IFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHH 240

Query: 241 YLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDDF 281
           YLLAMQ G                     +IP +NSLLRQVSSL+RRLP  ESGKFQDDF
Sbjct: 241 YLLAMQKG---------------------EIPYDNSLLRQVSSLLRRLPAIESGKFQDDF 268

[Close]

BLAST of CsGy7G008840 vs. TrEMBL
Match: tr|A0A2I4E456|A0A2I4E456_9ROSI (COP9 signalosome complex subunit 6a OS=Juglans regia OX=51240 GN=LOC108986105 PE=4 SV=1)

HSP 1 Score: 391.3 bits (1004), Expect = 1.9e-105
Identity = 216/303 (71.29%), Postives = 228/303 (75.25%), Query Frame = 0


Query: 2   ASSGSGLTFKLHPLVIVNISDHYTRVKSQMNPPSLSCSAASPCALSNGADAPDSTDPSTS 61
           +SS SGLTFKLHPLVIVNISDHYTRVKSQM+PP        P A  N     + TD +TS
Sbjct: 3   SSSSSGLTFKLHPLVIVNISDHYTRVKSQMHPP------IGPYANDNS----NGTDGATS 62

Query: 62  --PPAPRVFGCVVGVQRGRTVEIFNSFELLYDPKTHSLDRTFLEKKQELYKKVFPHFYIL 121
             PP PRV+GCV+G+QRGRTVEIFNSFELLYDP THSLDR+FLEKKQ+LYKKVFP+FYIL
Sbjct: 63  LPPPVPRVYGCVIGIQRGRTVEIFNSFELLYDPSTHSLDRSFLEKKQDLYKKVFPNFYIL 122

Query: 122 GWYSTGSDALESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES---------- 181
           GWYSTGSDA ESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYES          
Sbjct: 123 GWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIDGIPQ 182

Query: 182 ------------VEAERISVDHVAHLKPSDGGSAATQLAAHLAGIHSAIKMLNSRIRILH 241
                       VEAERISVDHVAHLKPSDGGSAATQLAAHL GIHSAIKMLNSRIR+LH
Sbjct: 183 LIFVRSNYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLH 242

Query: 242 SYLLAMQNGTSILHYSSNSDRALTADHSSSDIPLENSLLRQVSSLIRRLPVTESGKFQDD 281
            YLLAMQ G                     DI  ENSLLRQVSSL+RRLP  ES KFQDD
Sbjct: 243 YYLLAMQKG---------------------DILCENSLLRQVSSLLRRLPAIESEKFQDD 274

The following BLAST results are available for this feature:

BLAST of CsGy7G008840 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139760.1	3.5e-127	82.12	PREDICTED: COP9 signalosome complex subunit 6a [Cucumis sativus]	[more]
KGN44094.1	3.5e-127	82.12	hypothetical protein Csa_7G184650 [Cucumis sativus]	[more]
XP_008447803.1	3.3e-125	80.79	PREDICTED: COP9 signalosome complex subunit 6a [Cucumis melo] >XP_008447804.1 PR...	[more]
KVI02393.1	1.1e-107	75.53	JAB1/Mov34/MPN/PAD-1, partial [Cynara cardunculus var. scolymus]	[more]
XP_010063203.1	1.0e-105	70.20	PREDICTED: COP9 signalosome complex subunit 6a [Eucalyptus grandis]	[more]

BLAST of CsGy7G008840 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G56280.1	5.3e-101	67.00	COP9 signalosome subunit 6A	[more]
AT4G26430.1	5.8e-100	65.00	COP9 signalosome subunit 6B	[more]

BLAST of CsGy7G008840 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8W206\|CSN6A_ARATH	9.5e-100	67.00	COP9 signalosome complex subunit 6a OS=Arabidopsis thaliana OX=3702 GN=CSN6A PE=...	[more]
sp\|Q8W1P0\|CSN6B_ARATH	1.1e-98	65.00	COP9 signalosome complex subunit 6b OS=Arabidopsis thaliana OX=3702 GN=CSN6B PE=...	[more]
sp\|Q6NUC2\|CSN6_XENLA	1.6e-38	34.32	COP9 signalosome complex subunit 6 OS=Xenopus laevis OX=8355 GN=cops6 PE=2 SV=1	[more]
sp\|Q07G98\|CSN6_XENTR	6.1e-38	34.32	COP9 signalosome complex subunit 6 OS=Xenopus tropicalis OX=8364 GN=cops6 PE=2 S...	[more]
sp\|Q54C92\|CSN6_DICDI	1.8e-37	35.43	COP9 signalosome complex subunit 6 OS=Dictyostelium discoideum OX=44689 GN=csn6 ...	[more]

BLAST of CsGy7G008840 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K584\|A0A0A0K584_CUCSA	2.3e-127	82.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G184650 PE=4 SV=1	[more]
tr\|A0A1S3BI92\|A0A1S3BI92_CUCME	2.2e-125	80.79	COP9 signalosome complex subunit 6a OS=Cucumis melo OX=3656 GN=LOC103490191 PE=4...	[more]
tr\|A0A103Y4J1\|A0A103Y4J1_CYNCS	7.1e-108	75.53	JAB1/Mov34/MPN/PAD-1 (Fragment) OS=Cynara cardunculus var. scolymus OX=59895 GN=...	[more]
tr\|A0A200Q119\|A0A200Q119_9MAGN	1.9e-105	70.86	JAB/MPN domain OS=Macleaya cordata OX=56857 GN=BVC80_1501g13 PE=4 SV=1	[more]
tr\|A0A2I4E456\|A0A2I4E456_9ROSI	1.9e-105	71.29	COP9 signalosome complex subunit 6a OS=Juglans regia OX=51240 GN=LOC108986105 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0008180	COP9 signalosome

Vocabulary: **Biological Process**
Term	Definition
GO:0000338	protein deneddylation

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR037518	MPN
IPR033859	MPN_CSN6
IPR024969	Rpn11/EIF3F_C
IPR000555	JAMM/MPN+_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000338	protein deneddylation
cellular_component	GO:0008180	COP9 signalosome
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G008840.1	CsGy7G008840.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	SMART	SM00232	pad1_6	coord: 9..172 e-value: 5.6E-5 score: 32.5
IPR000555	JAB1/MPN/MOV34 metalloenzyme domain	PFAM	PF01398	JAB	coord: 6..145 e-value: 1.0E-24 score: 86.6
IPR024969	Rpn11/EIF3F, C-terminal	PFAM	PF13012	MitMem_reg	coord: 171..285 e-value: 2.2E-12 score: 47.3
None	No IPR available	PANTHER	PTHR10540	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED	coord: 3..280
IPR033859	COP9 signalosome subunit 6	PANTHER	PTHR10540:SF8	COP9 SIGNALOSOME COMPLEX SUBUNIT 6	coord: 3..280
IPR033859	COP9 signalosome subunit 6	CDD	cd08063	MPN_CSN6	coord: 8..280 e-value: 4.10001E-96 score: 287.227
IPR037518	MPN domain	PROSITE	PS50249	MPN	coord: 45..173 score: 15.825

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G008840	Cla005582	Watermelon (97103) v1	cgybwmB532
CsGy7G008840	Csa7G184650	Cucumber (Chinese Long) v2	cgybcuB323
CsGy7G008840	MELO3C013230	Melon (DHL92) v3.5.1	cgybmeB472
CsGy7G008840	ClCG09G021790	Watermelon (Charleston Gray)	cgybwcgB488
CsGy7G008840	CSPI07G09120	Wild cucumber (PI 183967)	cgybcpiB331
CsGy7G008840	CmaCh01G010370	Cucurbita maxima (Rimu)	cgybcmaB931
CsGy7G008840	CmoCh01G010760	Cucurbita moschata (Rifu)	cgybcmoB915
CsGy7G008840	Lsi02G017800	Bottle gourd (USVL1VR-Ls)	cgyblsiB474
CsGy7G008840	Cp4.1LG02g00210	Cucurbita pepo (Zucchini)	cgybcpeB954
CsGy7G008840	Cp4.1LG06g08040	Cucurbita pepo (Zucchini)	cgybcpeB984
CsGy7G008840	MELO3C013230.2	Melon (DHL92) v3.6.1	cgybmedB469
CsGy7G008840	CsaV3_7G021250	Cucumber (Chinese Long) v3	cgybcucB347
CsGy7G008840	Cla97C09G183230	Watermelon (97103) v2	cgybwmbB545
CsGy7G008840	Bhi09G001550	Wax gourd	cgybwgoB679
CsGy7G008840	Carg26619	Silver-seed gourd	carcgybB1015
CsGy7G008840	Carg23370	Silver-seed gourd	carcgybB0084

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G008840	Cucurbita maxima (Rimu)	cgybcmaB888
CsGy7G008840	Cucurbita moschata (Rifu)	cgybcmoB870