CsGy7G004560 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G004560
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	O-acyltransferase WSD1-like
Location	Chr7 : 3412093 .. 3414181 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATACTTTTACGGTGTCCTTTTCGCTCAATTACATAAAGAAAATCAAGACGAAGCTCGACGTGGTGAGTTTTGTAATGAAAAACGCATAACTCTATATTGAAGCTGCGAAAAAAAATATTCATATCTGTGTGTCCATGCCTGCATACACCTACCTCAACTGAATGTCAAGAAAATTTATAAAACGATATCATCATGAATTAATTGAATTCATCCTTCTCAATTATGTATTAAACTCGCATAACCCTTTTAACCACTAGAGTTATAACAATTTATTTTAGTCTTTCAGTTTTCGAAATGCCCAATTTAGCCATTAGTTCAGCTTTTTAAGAAAAAAAAAAGTACCATTGTTTGGTCGTTACCATATGATCTTGTCACGTCAAATTTGCCTCAATGGCTTGAATACATATTCATATTAGGTACATGACTATGCATATATGTTATTTATTTTATACTAACGAGTGTTATTTTTTTTTTCACTGAAAAATGCAGACAGTAAATGATGTGATAACAGGGATAACCTTCATGGGACTAAGGTTGTACATGGAAGAAATGGAGAAAAATTCCGGTGAAGTCGCAGCGACTGCATTGACAATAGTGAACACGAGAGTGATTGGAACCTACCGGCCGGCGACAGAGATGGCAAAACCAGAGAGCAAAGGACTATGGTGAAACCAATTATCTTACTTGGAAACTATGATCCCAAAAATGACCAACACTAACCCACTTGAGTTTGTCGTGGCTGCTCATCGCTCCATCAACAACAAACGAAACTCCTTCACTATTCATGTTGTGGCTCATCTTTTGAATCTCTTGAGAAAACTTCGTGGTCATCAGGTAAAATTATTACTATATAATATTACTCAAATTTTAGGTTTAACTATTGTTTTCGATTTGACCAATCCCATACGTTTTGGTTTACTATGGTTCAAAAGCTCGATCTTCATCATTAGTATTGTTTTAAAAAAAAAAAGACTGGGGTGCATCCTCTAGTTCTATTATATAACTGCTAAAAAAATGTATACGTACGTAGAGATTCAAGTTTGAAACTAAGTAAATTTCAATAATTAAGACTTCATGTATAACATTTTTAAAAATCGTAACAGATTTTGCTATATTTCACACTTTGTGTATATAATTTGGTAGGAAGTAGCAAAATTCCTCCACAATTTATTGAAGAACACAACCACAGTAATCTCAAATGTGATTGATCCACTTCAGCAAATGGCTTTAGATAATCATCCCATCAGCGGCTTATACTTCACCATCGTGGGCACACCTCAGGTTTTTATTTCATTATTTATTTATATATAATATAGCTTTAAATTCAATAATTTTTTCACGAAAGAGAGAGAGAGAGAAACAAAAAATCATTAAAAAAAGTTCATATGTGTGTGTGTGTATTTTTCTAATTTTTTGCAGAGTGTTACGGTAACGATGTTGAGTTATATGGGGAAACTGAGAGTTGCATTCAGAACAGAAAAGGATTTCATTGATGCCCACGAGTTAAATTCTTGTATGGAAGATGCATTTAAGAAGATATTTGAAGCAGCAAATGATATTCCTTCACCGTAAACTATATATTCGTGTATGCTAATTTAATTTGTTAACTGTTTCTTTATGTCATGTAATGATAATAATAAACTACAGAAAAATATGGATCCCTTGGCTCATACACCAATACTTTTACTACGTACGCCTCATCTAAAACAACCATCAATGGAGGTTAGAGTCGAAAAATACCAACAACAATTATGATAAAATAAAATTAATAATGAACCTGGAAAGCGAACGAAAATCCATATAAGCTATATGACTCGGATGACTTATCCTTCATTATGCCTCCATTTTCCCATTAAGTGCACCCTTCAAGCTGCTCGATCAATGTTTTACTGAAAATCATGTTCCTCTAGTGGTAGCTACAAAAGTCCTCCAAGTCATCTATGAGCCACACTGGTCCAGTCCATTTGTATTCGCTTTTCCCTTCCCAACATTTCCAACTCAATGAAATAGAATACATGTGATTATCTTCACCCCATTCTCACCGCTCTGAAACTCAAGGTCTAGAAAATCTGTCCAACTCAATTT

mRNA sequence

ATGAATACTTTTACGGTGTCCTTTTCGCTCAATTACATAAAGAAAATCAAGACGAAGCTCGACGTGACAGTAAATGATGTGATAACAGGGATAACCTTCATGGGACTAAGGTTGTACATGGAAGAAATGGAGAAAAATTCCGGTGAAGTCGCAGCGACTGCATTGACAATAGTGAACACGAGAGTGATTGGAACCTACCGGCCGGCGACAGAGATGGCAAAACCAGAGAGCAAAGGACTATGGTGAAACCAATTATCTTACTTGGAAACTATGATCCCAAAAATGACCAACACTAACCCACTTGAGTTTGTCGTGGCTGCTCATCGCTCCATCAACAACAAACGAAACTCCTTCACTATTCATGTTGTGGCTCATCTTTTGAATCTCTTGAGAAAACTTCGTGGTCATCAGGAAGTAGCAAAATTCCTCCACAATTTATTGAAGAACACAACCACAGTAATCTCAAATGTGATTGATCCACTTCAGCAAATGGCTTTAGATAATCATCCCATCAGCGGCTTATACTTCACCATCGTGGGCACACCTCAGAGTGTTACGGTAACGATGTTGAGTTATATGGGGAAACTGAGAGTTGCATTCAGAACAGAAAAGGATTTCATTGATGCCCACGAGTTAAATTCTTGTATGGAAGATGCATTTAAGAAGATATTTGAAGCAGCAAATGATATTCCTTCACCGTAAACTATATATTCGTGTATGCTAATTTAATTTGTTAACTGTTTCTTTATGTCATGTAATGATAATAATAAACTACAGAAAAATATGGATCCCTTGGCTCATACACCAATACTTTTACTACGTACGCCTCATCTAAAACAACCATCAATGGAGGTTAGAGTCGAAAAATACCAACAACAATTATGATAAAATAAAATTAATAATGAACCTGGAAAGCGAACGAAAATCCATATAAGCTATATGACTCGGATGACTTATCCTTCATTATGCCTCCATTTTCCCATTAAGTGCACCCTTCAAGCTGCTCGATCAATGTTTTACTGAAAATCATGTTCCTCTAGTGGTAGCTACAAAAGTCCTCCAAGTCATCTATGAGCCACACTGGTCCAGTCCATTTGTATTCGCTTTTCCCTTCCCAACATTTCCAACTCAATGAAATAGAATACATGTGATTATCTTCACCCCATTCTCACCGCTCTGAAACTCAAGGTCTAGAAAATCTGTCCAACTCAATTT

Coding sequence (CDS)

ATGAATACTTTTACGGTGTCCTTTTCGCTCAATTACATAAAGAAAATCAAGACGAAGCTCGACGTGACAGTAAATGATGTGATAACAGGGATAACCTTCATGGGACTAAGGTTGTACATGGAAGAAATGGAGAAAAATTCCGGTGAAGTCGCAGCGACTGCATTGACAATAGTGAACACGAGAGTGATTGGAACCTACCGGCCGGCGACAGAGATGGCAAAACCAGAGAGCAAAGGACTATGGTGA

Protein sequence

MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNTRVIGTYRPATEMAKPESKGLW

Homology

[Close]

BLAST of CsGy7G004560 vs. NCBI nr
Match: KGN43654.1 (hypothetical protein Csa_7G051340 [Cucumis sativus])

HSP 1 Score: 161.0 bits (406), Expect = 1.7e-36
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNT 60
           MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNT
Sbjct: 203 MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNT 262

Query: 61  RVIGTYRPATEMAKPESKGLW 82
           RVIGTYRPATEMAKPESKGLW
Sbjct: 263 RVIGTYRPATEMAKPESKGLW 283

[Close]

BLAST of CsGy7G004560 vs. NCBI nr
Match: XP_008455536.1 (PREDICTED: O-acyltransferase WSD1-like [Cucumis melo])

HSP 1 Score: 146.0 bits (367), Expect = 5.7e-32
Identity = 75/81 (92.59%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1   MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNT 60
           MNTFTVSFSLN IKKIKTKL VTVNDVITGI FMGLRLYMEE+EKNSGEVAATALTIVNT
Sbjct: 225 MNTFTVSFSLNDIKKIKTKLQVTVNDVITGIIFMGLRLYMEEIEKNSGEVAATALTIVNT 284

Query: 61  RVIGTYRPATEMAKPESKGLW 82
           RVIG YR ATEMAKPESKGLW
Sbjct: 285 RVIGNYRSATEMAKPESKGLW 305

[Close]

BLAST of CsGy7G004560 vs. NCBI nr
Match: XP_013456649.1 (O-acyltransferase WSD1 isoform X2 [Medicago truncatula] >KEH30680.1 O-acyltransferase WSD1-like protein [Medicago truncatula])

HSP 1 Score: 92.0 bits (227), Expect = 9.7e-16
Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 5   TVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNTRVIG 64
           T+S SL+ IK+IKTKL VT+NDV+ G+ F G+RLYM+EM + +    +TA+ ++NTR IG
Sbjct: 248 TISLSLDQIKEIKTKLKVTINDVVCGMVFYGIRLYMKEMNEKTKRANSTAVVMLNTRNIG 307

Query: 65  TYRPATEMAKPESKGLW 82
            Y+  TEM KPE KGLW
Sbjct: 308 GYQSLTEMQKPECKGLW 324

[Close]

BLAST of CsGy7G004560 vs. NCBI nr
Match: KEH30682.1 (O-acyltransferase WSD1-like protein [Medicago truncatula])

HSP 1 Score: 92.0 bits (227), Expect = 9.7e-16
Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 5   TVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNTRVIG 64
           T+S SL+ IK+IKTKL VT+NDV+ G+ F G+RLYM+EM + +    +TA+ ++NTR IG
Sbjct: 240 TISLSLDQIKEIKTKLKVTINDVVCGMVFYGIRLYMKEMNEKTKRANSTAVVMLNTRNIG 299

Query: 65  TYRPATEMAKPESKGLW 82
            Y+  TEM KPE KGLW
Sbjct: 300 GYQSLTEMQKPECKGLW 316

[Close]

BLAST of CsGy7G004560 vs. NCBI nr
Match: XP_013456651.2 (O-acyltransferase WSD1 [Medicago truncatula])

HSP 1 Score: 92.0 bits (227), Expect = 9.7e-16
Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 5   TVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNTRVIG 64
           T+S SL+ IK+IKTKL VT+NDV+ G+ F G+RLYM+EM + +    +TA+ ++NTR IG
Sbjct: 248 TISLSLDQIKEIKTKLKVTINDVVCGMVFYGIRLYMKEMNEKTKRANSTAVVMLNTRNIG 307

Query: 65  TYRPATEMAKPESKGLW 82
            Y+  TEM KPE KGLW
Sbjct: 308 GYQSLTEMQKPECKGLW 324

[Close]

BLAST of CsGy7G004560 vs. TAIR10
Match: AT5G22490.1 (O-acyltransferase (WSD1-like) family protein)

HSP 1 Score: 42.0 bits (97), Expect = 2.1e-04
Identity = 30/89 (33.71%), Postives = 43/89 (48.31%), Query Frame = 0


Query: 9   SLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALT------------ 68
           SL+ IK IK  +++T+NDV+ G+T   L  Y+ +    + E A T+LT            
Sbjct: 239 SLDDIKLIKNAMEMTINDVLLGVTEAALTRYLHQSYDKTNEEAGTSLTPNRQDLLDRIRL 298

Query: 69  ----IVNTRVIGTYRPATEMAKPESKGLW 82
               +VN R  G+   A  MAK  SK  W
Sbjct: 299 RSLIVVNLRPTGSQSIADMMAK-GSKCRW 326

[Close]

BLAST of CsGy7G004560 vs. TrEMBL
Match: tr|A0A0A0K3V2|A0A0A0K3V2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051340 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 1.1e-36
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0


Query: 1   MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNT 60
           MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNT
Sbjct: 203 MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNT 262

Query: 61  RVIGTYRPATEMAKPESKGLW 82
           RVIGTYRPATEMAKPESKGLW
Sbjct: 263 RVIGTYRPATEMAKPESKGLW 283

[Close]

BLAST of CsGy7G004560 vs. TrEMBL
Match: tr|A0A1S3C1V4|A0A1S3C1V4_CUCME (O-acyltransferase WSD1-like OS=Cucumis melo OX=3656 GN=LOC103495688 PE=4 SV=1)

HSP 1 Score: 146.0 bits (367), Expect = 3.7e-32
Identity = 75/81 (92.59%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1   MNTFTVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNT 60
           MNTFTVSFSLN IKKIKTKL VTVNDVITGI FMGLRLYMEE+EKNSGEVAATALTIVNT
Sbjct: 225 MNTFTVSFSLNDIKKIKTKLQVTVNDVITGIIFMGLRLYMEEIEKNSGEVAATALTIVNT 284

Query: 61  RVIGTYRPATEMAKPESKGLW 82
           RVIG YR ATEMAKPESKGLW
Sbjct: 285 RVIGNYRSATEMAKPESKGLW 305

[Close]

BLAST of CsGy7G004560 vs. TrEMBL
Match: tr|A0A072ULU8|A0A072ULU8_MEDTR (O-acyltransferase WSD1-like protein OS=Medicago truncatula OX=3880 GN=25485843 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.4e-16
Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 5   TVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNTRVIG 64
           T+S SL+ IK+IKTKL VT+NDV+ G+ F G+RLYM+EM + +    +TA+ ++NTR IG
Sbjct: 240 TISLSLDQIKEIKTKLKVTINDVVCGMVFYGIRLYMKEMNEKTKRANSTAVVMLNTRNIG 299

Query: 65  TYRPATEMAKPESKGLW 82
            Y+  TEM KPE KGLW
Sbjct: 300 GYQSLTEMQKPECKGLW 316

[Close]

BLAST of CsGy7G004560 vs. TrEMBL
Match: tr|A0A072UXS2|A0A072UXS2_MEDTR (O-acyltransferase WSD1-like protein OS=Medicago truncatula OX=3880 GN=25494442 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 6.4e-16
Identity = 43/77 (55.84%), Postives = 58/77 (75.32%), Query Frame = 0


Query: 5   TVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNTRVIG 64
           T+S SL+ IK+IKTKL VT+NDV+ G+ F G+RLYM+EM + +    +TA+ ++NTR IG
Sbjct: 248 TISLSLDQIKEIKTKLKVTINDVVCGMVFYGIRLYMKEMNEKTKRANSTAVVMLNTRNIG 307

Query: 65  TYRPATEMAKPESKGLW 82
            Y+  TEM KPE KGLW
Sbjct: 308 GYQSLTEMQKPECKGLW 324

[Close]

BLAST of CsGy7G004560 vs. TrEMBL
Match: tr|M5VU95|M5VU95_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G117600 PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 1.9e-15
Identity = 42/77 (54.55%), Postives = 56/77 (72.73%), Query Frame = 0


Query: 5   TVSFSLNYIKKIKTKLDVTVNDVITGITFMGLRLYMEEMEKNSGEVAATALTIVNTRVIG 64
           T++FSL+ IK IK KL VTVNDV+TG+ F G RLYM+EM ++S +   TA+ ++NTR++G
Sbjct: 231 TMTFSLDQIKSIKDKLGVTVNDVLTGMIFFGTRLYMQEMNQSSSKADCTAMVLLNTRIMG 290

Query: 65  TYRPATEMAKPESKGLW 82
            Y P  EM KP SK  W
Sbjct: 291 DYLPIEEMIKPNSKAPW 307

The following BLAST results are available for this feature:

BLAST of CsGy7G004560 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43654.1	1.7e-36	100.00	hypothetical protein Csa_7G051340 [Cucumis sativus]	[more]
XP_008455536.1	5.7e-32	92.59	PREDICTED: O-acyltransferase WSD1-like [Cucumis melo]	[more]
XP_013456649.1	9.7e-16	55.84	O-acyltransferase WSD1 isoform X2 [Medicago truncatula] >KEH30680.1 O-acyltransf...	[more]
KEH30682.1	9.7e-16	55.84	O-acyltransferase WSD1-like protein [Medicago truncatula]	[more]
XP_013456651.2	9.7e-16	55.84	O-acyltransferase WSD1 [Medicago truncatula]	[more]

BLAST of CsGy7G004560 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22490.1	2.1e-04	33.71	O-acyltransferase (WSD1-like) family protein	[more]

BLAST of CsGy7G004560 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G004560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K3V2\|A0A0A0K3V2_CUCSA	1.1e-36	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G051340 PE=4 SV=1	[more]
tr\|A0A1S3C1V4\|A0A1S3C1V4_CUCME	3.7e-32	92.59	O-acyltransferase WSD1-like OS=Cucumis melo OX=3656 GN=LOC103495688 PE=4 SV=1	[more]
tr\|A0A072ULU8\|A0A072ULU8_MEDTR	6.4e-16	55.84	O-acyltransferase WSD1-like protein OS=Medicago truncatula OX=3880 GN=25485843 P...	[more]
tr\|A0A072UXS2\|A0A072UXS2_MEDTR	6.4e-16	55.84	O-acyltransferase WSD1-like protein OS=Medicago truncatula OX=3880 GN=25494442 P...	[more]
tr\|M5VU95\|M5VU95_PRUPE	1.9e-15	54.55	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G117600 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045017	glycerolipid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0004144	diacylglycerol O-acyltransferase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G004560.1	CsGy7G004560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31650:SF7	SUBFAMILY NOT NAMED	coord: 4..81
None	No IPR available	PANTHER	PTHR31650	FAMILY NOT NAMED	coord: 4..81

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy7G004560	Csa7G051330	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G004560	CSPI07G05010	Wild cucumber (PI 183967)	cgybcpiB332

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G004560	Watermelon (97103) v2	cgybwmbB524
CsGy7G004560	Cucumber (Gy14) v2	cgybcgybB137
CsGy7G004560	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G004560	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G004560	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G004560	Bottle gourd (USVL1VR-Ls)	cgyblsiB469
CsGy7G004560	Melon (DHL92) v3.5.1	cgybmeB466
CsGy7G004560	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G004560	Melon (DHL92) v3.6.1	cgybmedB462
CsGy7G004560	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G004560	Watermelon (Charleston Gray)	cgybwcgB527
CsGy7G004560	Watermelon (97103) v1	cgybwmB546
CsGy7G004560	Cucumber (Chinese Long) v3	cgybcucB314
CsGy7G004560	Cucumber (Chinese Long) v3	cgybcucB348