CsGy7G003080 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy7G003080
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	basic leucine zipper 61-like
Location	Chr7 : 2396555 .. 2396755 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATGCAGCTCATCAAGAGGCATTAAAAAGGGAGATAGAGAGATTAAGACAAGTATATCACCAACAAAACATCAAGAAAATGGAAAATGCATCACCATCACCAGCAATTACTCCATCTCAACCTGTCGCCACCACCGTCCCTGATGCCAAACTTCCAAACGTAGATCAAAACGAGCAAGTTCCAAATGTCATGGTTTAG

mRNA sequence

ATGGATGCAGCTCATCAAGAGGCATTAAAAAGGGAGATAGAGAGATTAAGACAAGTATATCACCAACAAAACATCAAGAAAATGGAAAATGCATCACCATCACCAGCAATTACTCCATCTCAACCTGTCGCCACCACCGTCCCTGATGCCAAACTTCCAAACGTAGATCAAAACGAGCAAGTTCCAAATGTCATGGTTTAG

Coding sequence (CDS)

ATGGATGCAGCTCATCAAGAGGCATTAAAAAGGGAGATAGAGAGATTAAGACAAGTATATCACCAACAAAACATCAAGAAAATGGAAAATGCATCACCATCACCAGCAATTACTCCATCTCAACCTGTCGCCACCACCGTCCCTGATGCCAAACTTCCAAACGTAGATCAAAACGAGCAAGTTCCAAATGTCATGGTTTAG

Protein sequence

MDAAHQEALKREIERLRQVYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV

Homology

[Close]

BLAST of CsGy7G003080 vs. NCBI nr
Match: XP_004144514.1 (PREDICTED: basic leucine zipper 61 [Cucumis sativus] >KGN43491.1 hypothetical protein Csa_7G041360 [Cucumis sativus])

HSP 1 Score: 95.9 bits (237), Expect = 5.5e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 19  VYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV 67
           VYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV
Sbjct: 279 VYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV 326

[Close]

BLAST of CsGy7G003080 vs. NCBI nr
Match: XP_008455472.1 (PREDICTED: basic leucine zipper 61-like [Cucumis melo])

HSP 1 Score: 95.5 bits (236), Expect = 7.1e-17
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0


Query: 18  QVYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV 67
           QVYHQQNIKKMENASPSPAITPSQPVATT+PD KLPNVDQNEQVPNVMV
Sbjct: 279 QVYHQQNIKKMENASPSPAITPSQPVATTIPDGKLPNVDQNEQVPNVMV 327

[Close]

BLAST of CsGy7G003080 vs. NCBI nr
Match: XP_021632853.1 (basic leucine zipper 61-like isoform X1 [Manihot esculenta] >OAY33966.1 hypothetical protein MANES_13G139500 [Manihot esculenta])

HSP 1 Score: 58.5 bits (140), Expect = 9.7e-06
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 4   AHQEALKREIERLRQVYHQQNIKKMENASPSPAITPSQ 42
           AHQEALKREIERLRQVYHQQN+KKMEN++  P   P +
Sbjct: 281 AHQEALKREIERLRQVYHQQNLKKMENSATDPTTAPEK 318

[Close]

BLAST of CsGy7G003080 vs. NCBI nr
Match: KNA17147.1 (hypothetical protein SOVF_082670 [Spinacia oleracea])

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-05
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 4   AHQEALKREIERLRQVYHQQNIKKMENASPSPAITPSQPVATTV 48
           AHQEA+KREIERLRQVY+QQN+ K EN  P P  T SQP  TT+
Sbjct: 322 AHQEAMKREIERLRQVYYQQNLNKPENIVPPPITTQSQPPDTTL 365

[Close]

BLAST of CsGy7G003080 vs. NCBI nr
Match: XP_021845286.1 (basic leucine zipper 34-like isoform X1 [Spinacia oleracea])

HSP 1 Score: 57.8 bits (138), Expect = 1.6e-05
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 4   AHQEALKREIERLRQVYHQQNIKKMENASPSPAITPSQPVATTV 48
           AHQEA+KREIERLRQVY+QQN+ K EN  P P  T SQP  TT+
Sbjct: 319 AHQEAMKREIERLRQVYYQQNLNKPENIVPPPITTQSQPPDTTL 362

[Close]

BLAST of CsGy7G003080 vs. TrEMBL
Match: tr|A0A0A0K6T0|A0A0A0K6T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041360 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-17
Identity = 48/48 (100.00%), Postives = 48/48 (100.00%), Query Frame = 0


Query: 19  VYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV 67
           VYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV
Sbjct: 279 VYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV 326

[Close]

BLAST of CsGy7G003080 vs. TrEMBL
Match: tr|A0A1S3C1Q0|A0A1S3C1Q0_CUCME (basic leucine zipper 61-like OS=Cucumis melo OX=3656 GN=LOC103495628 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 4.7e-17
Identity = 47/49 (95.92%), Postives = 48/49 (97.96%), Query Frame = 0


Query: 18  QVYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPNVMV 67
           QVYHQQNIKKMENASPSPAITPSQPVATT+PD KLPNVDQNEQVPNVMV
Sbjct: 279 QVYHQQNIKKMENASPSPAITPSQPVATTIPDGKLPNVDQNEQVPNVMV 327

[Close]

BLAST of CsGy7G003080 vs. TrEMBL
Match: tr|A0A2C9UTP3|A0A2C9UTP3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G139500 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 6.4e-06
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0


Query: 4   AHQEALKREIERLRQVYHQQNIKKMENASPSPAITPSQ 42
           AHQEALKREIERLRQVYHQQN+KKMEN++  P   P +
Sbjct: 281 AHQEALKREIERLRQVYHQQNLKKMENSATDPTTAPEK 318

[Close]

BLAST of CsGy7G003080 vs. TrEMBL
Match: tr|A0A0K9RE90|A0A0K9RE90_SPIOL (Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_082670 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-05
Identity = 30/44 (68.18%), Postives = 34/44 (77.27%), Query Frame = 0


Query: 4   AHQEALKREIERLRQVYHQQNIKKMENASPSPAITPSQPVATTV 48
           AHQEA+KREIERLRQVY+QQN+ K EN  P P  T SQP  TT+
Sbjct: 322 AHQEAMKREIERLRQVYYQQNLNKPENIVPPPITTQSQPPDTTL 365

[Close]

BLAST of CsGy7G003080 vs. TrEMBL
Match: tr|Q0GPI0|Q0GPI0_SOYBN (BZIP transcription factor bZIP50 OS=Glycine max OX=3847 GN=bZIP50 PE=2 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.4e-05
Identity = 36/61 (59.02%), Postives = 40/61 (65.57%), Query Frame = 0


Query: 4   AHQEALKREIERLRQVYHQQNIKKMENASPSPAITPSQPVATTVPDAKLPNVDQNEQVPN 63
           AHQEALKREIERLRQVYHQQNIKKM+NA+ SP   PSQ               + EQ+ N
Sbjct: 273 AHQEALKREIERLRQVYHQQNIKKMDNAAGSP---PSQXXXXXXXXXXXETHTEKEQLIN 330

Query: 64  V 65
           V
Sbjct: 333 V 330

The following BLAST results are available for this feature:

BLAST of CsGy7G003080 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144514.1	5.5e-17	100.00	PREDICTED: basic leucine zipper 61 [Cucumis sativus] >KGN43491.1 hypothetical pr...	[more]
XP_008455472.1	7.1e-17	95.92	PREDICTED: basic leucine zipper 61-like [Cucumis melo]	[more]
XP_021632853.1	9.7e-06	73.68	basic leucine zipper 61-like isoform X1 [Manihot esculenta] >OAY33966.1 hypothet...	[more]
KNA17147.1	1.6e-05	68.18	hypothetical protein SOVF_082670 [Spinacia oleracea]	[more]
XP_021845286.1	1.6e-05	68.18	basic leucine zipper 34-like isoform X1 [Spinacia oleracea]	[more]

BLAST of CsGy7G003080 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy7G003080 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy7G003080 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K6T0\|A0A0A0K6T0_CUCSA	3.6e-17	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G041360 PE=4 SV=1	[more]
tr\|A0A1S3C1Q0\|A0A1S3C1Q0_CUCME	4.7e-17	95.92	basic leucine zipper 61-like OS=Cucumis melo OX=3656 GN=LOC103495628 PE=4 SV=1	[more]
tr\|A0A2C9UTP3\|A0A2C9UTP3_MANES	6.4e-06	73.68	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_13G139500 PE=4 SV=...	[more]
tr\|A0A0K9RE90\|A0A0K9RE90_SPIOL	1.1e-05	68.18	Uncharacterized protein OS=Spinacia oleracea OX=3562 GN=SOVF_082670 PE=4 SV=1	[more]
tr\|Q0GPI0\|Q0GPI0_SOYBN	1.4e-05	59.02	BZIP transcription factor bZIP50 OS=Glycine max OX=3847 GN=bZIP50 PE=2 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy7G003080.1	CsGy7G003080.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 6..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..66

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy7G003080	Cucumber (Gy14) v2	cgybcgybB072
CsGy7G003080	Cucurbita maxima (Rimu)	cgybcmaB896
CsGy7G003080	Cucurbita maxima (Rimu)	cgybcmaB944
CsGy7G003080	Cucurbita maxima (Rimu)	cgybcmaB953
CsGy7G003080	Cucurbita moschata (Rifu)	cgybcmoB877
CsGy7G003080	Cucurbita moschata (Rifu)	cgybcmoB927
CsGy7G003080	Cucurbita moschata (Rifu)	cgybcmoB937
CsGy7G003080	Cucurbita pepo (Zucchini)	cgybcpeB910
CsGy7G003080	Cucurbita pepo (Zucchini)	cgybcpeB919
CsGy7G003080	Cucurbita pepo (Zucchini)	cgybcpeB964
CsGy7G003080	Cucumber (Chinese Long) v2	cgybcuB296
CsGy7G003080	Cucumber (Chinese Long) v2	cgybcuB324
CsGy7G003080	Cucumber (Chinese Long) v2	cgybcuB328
CsGy7G003080	Bottle gourd (USVL1VR-Ls)	cgyblsiB455
CsGy7G003080	Bottle gourd (USVL1VR-Ls)	cgyblsiB462
CsGy7G003080	Melon (DHL92) v3.5.1	cgybmeB452
CsGy7G003080	Melon (DHL92) v3.5.1	cgybmeB467
CsGy7G003080	Melon (DHL92) v3.5.1	cgybmeB468
CsGy7G003080	Melon (DHL92) v3.6.1	cgybmedB453
CsGy7G003080	Melon (DHL92) v3.6.1	cgybmedB464
CsGy7G003080	Melon (DHL92) v3.6.1	cgybmedB465
CsGy7G003080	Watermelon (Charleston Gray)	cgybwcgB504
CsGy7G003080	Watermelon (Charleston Gray)	cgybwcgB506
CsGy7G003080	Watermelon (97103) v1	cgybwmB559
CsGy7G003080	Watermelon (97103) v1	cgybwmB565
CsGy7G003080	Watermelon (97103) v1	cgybwmB566
CsGy7G003080	Wild cucumber (PI 183967)	cgybcpiB304
CsGy7G003080	Wild cucumber (PI 183967)	cgybcpiB332
CsGy7G003080	Silver-seed gourd	carcgybB0315
CsGy7G003080	Silver-seed gourd	carcgybB0354
CsGy7G003080	Cucumber (Chinese Long) v3	cgybcucB316
CsGy7G003080	Cucumber (Chinese Long) v3	cgybcucB348
CsGy7G003080	Cucumber (Chinese Long) v3	cgybcucB349
CsGy7G003080	Watermelon (97103) v2	cgybwmbB500
CsGy7G003080	Watermelon (97103) v2	cgybwmbB502
CsGy7G003080	Wax gourd	cgybwgoB640
CsGy7G003080	Wax gourd	cgybwgoB641
CsGy7G003080	Wax gourd	cgybwgoB650