CsGy7G001890 (gene) Cucumber (Gy14) v2

NameCsGy7G001890
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr7 : 1608378 .. 1608560 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTTGAATTTGAAACTACCTCTGGAGGAATAAGTAGATCCAAGAGCTTTAGTAGTTTCTTCATGATCATCGTTGTCGTTCATCTCCAGATCTCTAGCGAAGGCAGCTTTACGAGAGAGGATCCAGGACCATCCCCAATCCCACCACTTACGGAGAGAAGTACGGGTGAAATCGCGCATTGA

mRNA sequence

ATGTTTGAATTTGAAACTACCTCTGGAGGAATAAGTAGATCCAAGAGCTTTAGTAGTTTCTTCATGATCATCGTTGTCGTTCATCTCCAGATCTCTAGCGAAGGCAGCTTTACGAGAGAGGATCCAGGACCATCCCCAATCCCACCACTTACGGAGAGAAGTACGGGTGAAATCGCGCATTGA

Coding sequence (CDS)

ATGTTTGAATTTGAAACTACCTCTGGAGGAATAAGTAGATCCAAGAGCTTTAGTAGTTTCTTCATGATCATCGTTGTCGTTCATCTCCAGATCTCTAGCGAAGGCAGCTTTACGAGAGAGGATCCAGGACCATCCCCAATCCCACCACTTACGGAGAGAAGTACGGGTGAAATCGCGCATTGA

Protein sequence

MFEFETTSGGISRSKSFSSFFMIIVVVHLQISSEGSFTREDPGPSPIPPLTERSTGEIAH
BLAST of CsGy7G001890 vs. NCBI nr
Match: KGN43357.1 (hypothetical protein Csa_7G026760 [Cucumis sativus])

HSP 1 Score: 121.3 bits (303), Expect = 1.1e-24
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1   MFEFETTSGGISRSKSFSSFFMIIVVVHLQISSEGSFTREDPGPSPIPPLTERSTGEIAH 60
           MFEFETTSGGISRSKSFSSFFMIIVVVHLQISSEGSFTREDPGPSPIPPLTERSTGEIAH
Sbjct: 57  MFEFETTSGGISRSKSFSSFFMIIVVVHLQISSEGSFTREDPGPSPIPPLTERSTGEIAH 116

BLAST of CsGy7G001890 vs. TrEMBL
Match: tr|A0A0A0K4Y8|A0A0A0K4Y8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026760 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.3e-25
Identity = 60/60 (100.00%), Postives = 60/60 (100.00%), Query Frame = 0

Query: 1   MFEFETTSGGISRSKSFSSFFMIIVVVHLQISSEGSFTREDPGPSPIPPLTERSTGEIAH 60
           MFEFETTSGGISRSKSFSSFFMIIVVVHLQISSEGSFTREDPGPSPIPPLTERSTGEIAH
Sbjct: 57  MFEFETTSGGISRSKSFSSFFMIIVVVHLQISSEGSFTREDPGPSPIPPLTERSTGEIAH 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN43357.11.1e-24100.00hypothetical protein Csa_7G026760 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0K4Y8|A0A0A0K4Y8_CUCSA7.3e-25100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G026760 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy7G001890.1CsGy7G001890.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 35..60

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy7G001890Csa7G026760Cucumber (Chinese Long) v2cgybcuB324
CsGy7G001890CSPI07G01950Wild cucumber (PI 183967)cgybcpiB332
The following gene(s) are paralogous to this gene:

None