CsGy6G036060 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G036060
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Putative F-box/LRR-repeat protein 23
Location	Chr6 : 31655424 .. 31657818 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAACAAATGGTACTTGGAGGATTTGTACGGATGACTAATCGGTTCGGTGGTATGAAAAAATTTTCGGACTGAACTTTTCCCCTTTCATCGACCAAACCCTAGTTCTTGGTCATGTTGATCGTCCCAATCTCCATCTCAAAATTCCTTTGATTTTTCCCTATAAAATCACAATCAGTTTCAATTATTTTTTTCTCCCACGGCCATGGAATCGAACTCGAGCCCTAATTCGGTAGAAGGGGAATCTAGGAACTGGCTTGAACTCCCTGTAGACGTCACGTCTATGATTCTGCAGAAATTAGGTCCTGTTGAAATCCTCACCTACGCTCAATACGTTTGCTCTTCGTGGCGTAAGATCTGCGAGGACCCTCTCATGTGGCGCGTCATTGATATGCGATATCCCTGTGATTGGTGGGACATGGACTACAATTTGGAGGAGTTGTGCAGGCAGGCTGTTAAACGGAGTTGTGGCCAATTGATTCACTTTAACATTGAGCATTTTGGTACCGATGATTTGCTCCTCTATATCACTCAAAGGTATGTTTTTGTTCAATTTTAGTTTTACTGTCTCAGATGTTCGTACGGTTCTCTTGTTCTGATTTTATGATCAACAGAAATCAACCTCGAATCTGTACTGTAATTGAAGGCCATTGGATTCCCTGGCCATTGCGTATTGAACTTGCTGTTTAAATTTTATTCTCCCTATGTGATTCTTCGCTTTGTTTTGATTTGATTTTATAATTTCAAATGATCTGATAAAAACATGTTTTTATTCTTTGCTGTTTTATGTTTCTGTAATGCATATCTCTAATGTGAATCTGTGGGATGACACTTATTTCTGTTAACTGTAATTTTTACTTTTAGCCAAAAAAAATTAATGACATTTGTGAAAGCATAAAGGCATAAATAAGGCTTTGTAGACGTTAGTATATATGTTCAATTCATTTATTGCAGGAACAGATCATGATTGTTGATAGTTAGCCTTGCGTTACCTTACGTGGAGGATGACAAGTTTGATATGAACTCTAGTTCTTTTTTCTCGGGCATAAGAGAGGAACCTAAATGCTAGTTCTTTCTTGCTCCGCAATTTTCTTGCGATAACTATTAAAAAATTTCCATCGCAATTGTCAAATATTTTATTAAAGCTCTTCTCCTGGCACGGGTGTTGGAAGTTAAACCCTTTTTTAATCTTGGTATTACATTTAGTAAAGAAGGAACTTTCCACTAGTCAGAATGGAGAGGAGCCTCTTGTAAGTCATGGGTGACTGATGATTCTTTCGGACTCTTTTTGCAGTTGTAATCAACTTAGTAGACTCCGTCTTGTATATTGCAATCGCATCTCAGATGAGGGATTGGTTGAAGCAGTTTCAAAGCTTCCATTGTTGGAGGATCTTGAGTTATCATTCTGTTCATTTGATGTGGAAACTTTGGAAACTCTTGGTCAGAATTGTCCTGGTCTGAAATCTCTGAAACTGAACCGTCAGTTTTACAGGCGGGTGGAATGTGATAAAGGAGCCCTTGCTATTGCTGAAAATATGCCTAATCTACGTCACCTTCATATATTTGGCAACAACCTAACCAATAAGGGATTAGAAGCCATTCTTGATGGCTGTTCTGCTCTAGAATCCCTTGATTTACGCCATTGTTTTAATTTGAATTTGGCAGGACAGTTGGGGGCAAAATGTTCTGAAAAGATAAAAGATCTGCGCTTGCCTCATGATCCCACGGATGATTGTGAATTTACAACCGAAATTGTTGATGATGATGATACTTACGATGATGATTATGATTACCCTTTTGGTTTGTCTGACACTGATTTGTTGACTGATGATGATGACTACTATGAGTTCTCAGGGGGCAGCGATTTCTCTGACTATACAGACTTATATTTTTATTGAAGATTCAGTTTTAGAAGCATAAGGAGAAAGCCCAAACCCTGGACCAATATTTACTTGGTACCTCTCTGCCATGTCAATGGTAGTTGGTCCAAGGAGCCAACAACTGTTCAACTGCAAGAGAAGAAGTTTGAGAGGCTCTATTTCCATATTAGAGTGAATACTTTTGTTCTTCACTTCATTTGAGTATCTTCATTTTGTCGTGTTTATATACGATGTAGATAGTTCTAGTAAGTCTAAGAAACGTCTGGAGATTTAACTAACCAAGTGGTATGCTGTAAAGACACTAGTTCATGTGTTAAATATTCAATGTTTGTCTATTTTTGCACCGATCAACTTTATGCTGTATCACTTGGATTTTAAAATCTTGATATATCTTGCAATGTATAGTGGTTCTTTTTATAAATTTGTCTTGGAACTCTCGGAAGTTGTGAATTTACAACCACCACCACTTTCTTTTTATAAATGTATGAAGAATCCAGTGGTTTTTTTTTTTTTTTTGG

mRNA sequence

AAACAAATGGTACTTGGAGGATTTGTACGGATGACTAATCGGTTCGGTGGTATGAAAAAATTTTCGGACTGAACTTTTCCCCTTTCATCGACCAAACCCTAGTTCTTGGTCATGTTGATCGTCCCAATCTCCATCTCAAAATTCCTTTGATTTTTCCCTATAAAATCACAATCAGTTTCAATTATTTTTTTCTCCCACGGCCATGGAATCGAACTCGAGCCCTAATTCGGTAGAAGGGGAATCTAGGAACTGGCTTGAACTCCCTGTAGACGTCACGTCTATGATTCTGCAGAAATTAGGTCCTGTTGAAATCCTCACCTACGCTCAATACGTTTGCTCTTCGTGGCGTAAGATCTGCGAGGACCCTCTCATGTGGCGCGTCATTGATATGCGATATCCCTGTGATTGGTGGGACATGGACTACAATTTGGAGGAGTTGTGCAGGCAGGCTGTTAAACGGAGTTGTGGCCAATTGATTCACTTTAACATTGAGCATTTTGGTACCGATGATTTGCTCCTCTATATCACTCAAAGTTGTAATCAACTTAGTAGACTCCGTCTTGTATATTGCAATCGCATCTCAGATGAGGGATTGGTTGAAGCAGTTTCAAAGCTTCCATTGTTGGAGGATCTTGAGTTATCATTCTGTTCATTTGATGTGGAAACTTTGGAAACTCTTGGTCAGAATTGTCCTGGTCTGAAATCTCTGAAACTGAACCGTCAGTTTTACAGGCGGGTGGAATGTGATAAAGGAGCCCTTGCTATTGCTGAAAATATGCCTAATCTACGTCACCTTCATATATTTGGCAACAACCTAACCAATAAGGGATTAGAAGCCATTCTTGATGGCTGTTCTGCTCTAGAATCCCTTGATTTACGCCATTGTTTTAATTTGAATTTGGCAGGACAGTTGGGGGCAAAATGTTCTGAAAAGATAAAAGATCTGCGCTTGCCTCATGATCCCACGGATGATTGTGAATTTACAACCGAAATTGTTGATGATGATGATACTTACGATGATGATTATGATTACCCTTTTGGTTTGTCTGACACTGATTTGTTGACTGATGATGATGACTACTATGAGTTCTCAGGGGGCAGCGATTTCTCTGACTATACAGACTTATATTTTTATTGAAGATTCAGTTTTAGAAGCATAAGGAGAAAGCCCAAACCCTGGACCAATATTTACTTGGTACCTCTCTGCCATGTCAATGGTAGTTGGTCCAAGGAGCCAACAACTGTTCAACTGCAAGAGAAGAAGTTTGAGAGGCTCTATTTCCATATTAGAGTGAATACTTTTGTTCTTCACTTCATTTGAGTATCTTCATTTTGTCGTGTTTATATACGATGTAGATAGTTCTAGTAAGTCTAAGAAACGTCTGGAGATTTAACTAACCAAGTGGTATGCTGTAAAGACACTAGTTCATGTGTTAAATATTCAATGTTTGTCTATTTTTGCACCGATCAACTTTATGCTGTATCACTTGGATTTTAAAATCTTGATATATCTTGCAATGTATAGTGGTTCTTTTTATAAATTTGTCTTGGAACTCTCGGAAGTTGTGAATTTACAACCACCACCACTTTCTTTTTATAAATGTATGAAGAATCCAGTGGTTTTTTTTTTTTTTTTGG

Coding sequence (CDS)

ATGGAATCGAACTCGAGCCCTAATTCGGTAGAAGGGGAATCTAGGAACTGGCTTGAACTCCCTGTAGACGTCACGTCTATGATTCTGCAGAAATTAGGTCCTGTTGAAATCCTCACCTACGCTCAATACGTTTGCTCTTCGTGGCGTAAGATCTGCGAGGACCCTCTCATGTGGCGCGTCATTGATATGCGATATCCCTGTGATTGGTGGGACATGGACTACAATTTGGAGGAGTTGTGCAGGCAGGCTGTTAAACGGAGTTGTGGCCAATTGATTCACTTTAACATTGAGCATTTTGGTACCGATGATTTGCTCCTCTATATCACTCAAAGTTGTAATCAACTTAGTAGACTCCGTCTTGTATATTGCAATCGCATCTCAGATGAGGGATTGGTTGAAGCAGTTTCAAAGCTTCCATTGTTGGAGGATCTTGAGTTATCATTCTGTTCATTTGATGTGGAAACTTTGGAAACTCTTGGTCAGAATTGTCCTGGTCTGAAATCTCTGAAACTGAACCGTCAGTTTTACAGGCGGGTGGAATGTGATAAAGGAGCCCTTGCTATTGCTGAAAATATGCCTAATCTACGTCACCTTCATATATTTGGCAACAACCTAACCAATAAGGGATTAGAAGCCATTCTTGATGGCTGTTCTGCTCTAGAATCCCTTGATTTACGCCATTGTTTTAATTTGAATTTGGCAGGACAGTTGGGGGCAAAATGTTCTGAAAAGATAAAAGATCTGCGCTTGCCTCATGATCCCACGGATGATTGTGAATTTACAACCGAAATTGTTGATGATGATGATACTTACGATGATGATTATGATTACCCTTTTGGTTTGTCTGACACTGATTTGTTGACTGATGATGATGACTACTATGAGTTCTCAGGGGGCAGCGATTTCTCTGACTATACAGACTTATATTTTTATTGA

Protein sequence

MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLTDDDDYYEFSGGSDFSDYTDLYFY

Homology

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BLAST of CsGy6G036060 vs. NCBI nr
Match: XP_004134625.1 (PREDICTED: F-box protein SKIP19-like [Cucumis sativus] >KGN49443.1 hypothetical protein Csa_6G525300 [Cucumis sativus])

HSP 1 Score: 634.0 bits (1634), Expect = 2.6e-178
Identity = 310/311 (99.68%), Postives = 310/311 (99.68%), Query Frame = 0


Query: 1   MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60
           MESN SPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV
Sbjct: 1   MESNLSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60

Query: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120
           IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL
Sbjct: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120

Query: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180
           VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE
Sbjct: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180

Query: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240
           CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK
Sbjct: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240

Query: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300
           CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS
Sbjct: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300

Query: 301 DFSDYTDLYFY 312
           DFSDYTDLYFY
Sbjct: 301 DFSDYTDLYFY 311

[Close]

BLAST of CsGy6G036060 vs. NCBI nr
Match: XP_008439578.1 (PREDICTED: F-box protein SKIP19-like isoform X1 [Cucumis melo])

HSP 1 Score: 611.3 bits (1575), Expect = 1.8e-171
Identity = 295/311 (94.86%), Postives = 304/311 (97.75%), Query Frame = 0


Query: 1   MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60
           MESNS+PNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV
Sbjct: 1   MESNSNPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60

Query: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120
           IDMRYPCDWWDMDY+LEE+CRQAVKRSCG+LIH NIEHFGTDDLL YITQSCNQLSRLRL
Sbjct: 61  IDMRYPCDWWDMDYDLEEMCRQAVKRSCGELIHINIEHFGTDDLLRYITQSCNQLSRLRL 120

Query: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180
           VYCNRISDEGL+EAVSKLPLLEDLELSFCSF+VETL TLGQNCPGLKSLKLNRQFYRRVE
Sbjct: 121 VYCNRISDEGLIEAVSKLPLLEDLELSFCSFNVETLGTLGQNCPGLKSLKLNRQFYRRVE 180

Query: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240
           CDKGALAIA+NMPNLRHLHIFGNNLTN+GLEAIL GCSALESLDLR CFNLNLAGQLGAK
Sbjct: 181 CDKGALAIADNMPNLRHLHIFGNNLTNRGLEAILHGCSALESLDLRQCFNLNLAGQLGAK 240

Query: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300
           CSEKIKDLRLPHDPTDDCEFTTEI+DDDD YDDDYDYPFGLSDTDLL XXXXXYEFSGGS
Sbjct: 241 CSEKIKDLRLPHDPTDDCEFTTEIIDDDDNYDDDYDYPFGLSDTDLLTXXXXXYEFSGGS 300

Query: 301 DFSDYTDLYFY 312
           DFSDYTDLYFY
Sbjct: 301 DFSDYTDLYFY 311

[Close]

BLAST of CsGy6G036060 vs. NCBI nr
Match: XP_016899274.1 (PREDICTED: F-box protein SKIP19-like isoform X2 [Cucumis melo])

HSP 1 Score: 592.0 bits (1525), Expect = 1.1e-165
Identity = 289/311 (92.93%), Postives = 298/311 (95.82%), Query Frame = 0


Query: 1   MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60
           MESNS+PNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV
Sbjct: 1   MESNSNPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60

Query: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120
           IDMRYPCDWWDMDY+LEE+CRQAVKRSCG+LIH NIEHFGTDDLL YITQ      RLRL
Sbjct: 61  IDMRYPCDWWDMDYDLEEMCRQAVKRSCGELIHINIEHFGTDDLLRYITQ------RLRL 120

Query: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180
           VYCNRISDEGL+EAVSKLPLLEDLELSFCSF+VETL TLGQNCPGLKSLKLNRQFYRRVE
Sbjct: 121 VYCNRISDEGLIEAVSKLPLLEDLELSFCSFNVETLGTLGQNCPGLKSLKLNRQFYRRVE 180

Query: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240
           CDKGALAIA+NMPNLRHLHIFGNNLTN+GLEAIL GCSALESLDLR CFNLNLAGQLGAK
Sbjct: 181 CDKGALAIADNMPNLRHLHIFGNNLTNRGLEAILHGCSALESLDLRQCFNLNLAGQLGAK 240

Query: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300
           CSEKIKDLRLPHDPTDDCEFTTEI+DDDD YDDDYDYPFGLSDTDLL XXXXXYEFSGGS
Sbjct: 241 CSEKIKDLRLPHDPTDDCEFTTEIIDDDDNYDDDYDYPFGLSDTDLLTXXXXXYEFSGGS 300

Query: 301 DFSDYTDLYFY 312
           DFSDYTDLYFY
Sbjct: 301 DFSDYTDLYFY 305

[Close]

BLAST of CsGy6G036060 vs. NCBI nr
Match: XP_023543623.1 (F-box protein SKIP19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 531.9 bits (1369), Expect = 1.4e-147
Identity = 261/311 (83.92%), Postives = 279/311 (89.71%), Query Frame = 0


Query: 1   MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60
           MESNSSPNS+  E+RNWLELP DVTSMIL KLGPV+ILT AQ VCSSWRKICEDPLMWRV
Sbjct: 3   MESNSSPNSLGEEARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRV 62

Query: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120
           +DMRY  DWWDMDY+LEE+CRQAV RSCGQLI+ NIEHFGTDDLL YITQS NQL +LRL
Sbjct: 63  VDMRYSGDWWDMDYDLEEMCRQAVDRSCGQLIYINIEHFGTDDLLHYITQSSNQLRKLRL 122

Query: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180
           VYCNRISDEGL++AVSKLPLLEDLE+SF SFDVETLETLGQ  P LKSLKLNRQFYRRVE
Sbjct: 123 VYCNRISDEGLIKAVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVE 182

Query: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240
           CDKGALAIAENMPNLRHL IFGN+LTN+GLEAILDGC  LESLDLR CFNLNLAGQLGAK
Sbjct: 183 CDKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAK 242

Query: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300
           CSEKIK+LRLPHDPTDD EF+TEIV+  D Y++DY YPFGLSDTDLL      YEFSGGS
Sbjct: 243 CSEKIKNLRLPHDPTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDLLTDDDDYYEFSGGS 302

Query: 301 DFSDYTDLYFY 312
           DFSDYTDLYFY
Sbjct: 303 DFSDYTDLYFY 313

[Close]

BLAST of CsGy6G036060 vs. NCBI nr
Match: XP_022925897.1 (F-box protein SKIP19-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 529.3 bits (1362), Expect = 9.1e-147
Identity = 260/311 (83.60%), Postives = 277/311 (89.07%), Query Frame = 0


Query: 1   MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60
           MESNSSPNS+  E+RNWLELP DVTSMIL KLGPV+ILT AQ VCSSWRKICEDPLMWRV
Sbjct: 3   MESNSSPNSLGEEARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRV 62

Query: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120
           +DMRY  DWWDMDY+LEE+CRQAV RSCGQLI+  IEHFGTDDLL YITQS NQL  LRL
Sbjct: 63  VDMRYSGDWWDMDYDLEEMCRQAVDRSCGQLIYIKIEHFGTDDLLQYITQSSNQLRELRL 122

Query: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180
           VYCNRISDEGL++AVSKLPLLEDLE+SF SFDVETLETLGQ  P LKSLKLNRQFYRRVE
Sbjct: 123 VYCNRISDEGLIKAVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVE 182

Query: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240
           CDKGALAIAENMPNLRHL IFGN+LTN+GLEAILDGC  LESLDLR CFNLNLAGQLGAK
Sbjct: 183 CDKGALAIAENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAK 242

Query: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300
           CSEKIK+LRLPHDPTDD EF+TEIV+  D Y++DY YPFGLSDTDLL      YEFSGGS
Sbjct: 243 CSEKIKNLRLPHDPTDDYEFSTEIVEYGDDYEEDYGYPFGLSDTDLLTDDDDYYEFSGGS 302

Query: 301 DFSDYTDLYFY 312
           DFSDYTDLYFY
Sbjct: 303 DFSDYTDLYFY 313

[Close]

BLAST of CsGy6G036060 vs. TAIR10
Match: AT4G05460.1 (RNI-like superfamily protein)

HSP 1 Score: 276.2 bits (705), Expect = 2.5e-74
Identity = 151/289 (52.25%), Postives = 191/289 (66.09%), Query Frame = 0


Query: 1   MESNSSPNSV--EGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMW 60
           M S+SSP +    GES NW ELP ++TS IL +LG +EIL  AQ VC SWR++C+DP MW
Sbjct: 1   MASSSSPPAAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMW 60

Query: 61  RVIDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRL 120
           R IDM    D  DMDYNLE +CR AV RS G L+   I +FGT DLL YI    + L  L
Sbjct: 61  RKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSL 120

Query: 121 RLVYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRR 180
           RL+ C++I+D+G VEAV KLP LE+LELS+CSF VE+L  +GQ C  +K+LKLN+  + +
Sbjct: 121 RLIRCSQITDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLNK--HPQ 180

Query: 181 VECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLG 240
            E D  ALAIAE MP LRHL + GN L++ GL AILD CS LE LDLR CFN+NL G L 
Sbjct: 181 KENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQ 240

Query: 241 AKCSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLL 288
            +C E +K +R P+D   D +  +   +D+D YD         SD DL+
Sbjct: 241 KRCFESVKVVRHPNDSIHDIDIGSS--EDEDPYD--------FSDIDLM 276

[Close]

BLAST of CsGy6G036060 vs. TAIR10
Match: AT4G05490.1 (RNI-like superfamily protein)

HSP 1 Score: 230.7 bits (587), Expect = 1.2e-60
Identity = 130/280 (46.43%), Postives = 173/280 (61.79%), Query Frame = 0


Query: 11  EGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWW 70
           E +  NW ELP D+ S IL +L P+EIL  A+ VC SWR++ +DPL+WR IDMR     +
Sbjct: 21  EEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLY 80

Query: 71  DMDYNLEELCRQAVKRSCGQLIHFNIE--HFGTDDLLLYITQSCNQLSRLRLVYCNRISD 130
            + Y +E  CR  V  S G L+ FNI+   F T  LL Y+ +  + L RLR V   +I+ 
Sbjct: 81  CI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQITS 140

Query: 131 EGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVECDKGALAI 190
            G+ EA+ KLPLLE+LEL +CS + E  +T+GQ CP LK+LKL   +    E D  ALAI
Sbjct: 141 VGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAI 200

Query: 191 AENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKDL 250
           A+ MP L HL +  N LTN GL AILDGC  LE LDLR CFN+NL G L  +C E+IKD 
Sbjct: 201 ADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDF 260

Query: 251 RLPHDPTDDCE---FTTEIVDDDDTYDDDYDYPFGLSDTD 286
           R P+D  DD     F+     +D+  +++ +Y +G  DT+
Sbjct: 261 RCPNDVLDDYNYVIFSDNGSIEDEKGEEEENYSYGSDDTE 298

[Close]

BLAST of CsGy6G036060 vs. TAIR10
Match: AT4G05475.1 (RNI-like superfamily protein)

HSP 1 Score: 216.1 bits (549), Expect = 3.1e-56
Identity = 116/263 (44.11%), Postives = 164/263 (62.36%), Query Frame = 0


Query: 16  NWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDYN 75
           NW++LP ++T+ IL +L   +IL  A+ +C +WR+IC+DP MWR I++R  C  ++ D+ 
Sbjct: 39  NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLR-DCLMYEFDF- 98

Query: 76  LEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYIT-QSCNQLSRLRLVYCNRISDEGLVEA 135
            E +CR  V  S G L+  NIEHF +D LL YI  +SCN L  L +     ++++G++  
Sbjct: 99  -ESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCN-LKSLGISIYEPMTNKGVMNG 158

Query: 136 VSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNR------------QFYRRVECD 195
           + KLPLLE L +   S  ++ L+ +G  CP LK+LKLN              +   +ECD
Sbjct: 159 IEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECD 218

Query: 196 KGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALES-LDLRHCFNLNLAGQLGAKC 255
             ALAIAE+MP LRHL + GN LTN GL AILDGC  LE  LD+R CFN+NL G L  +C
Sbjct: 219 DDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRC 278

Query: 256 SEKIKDLRLPHDPTDDCEFTTEI 265
            ++IK+LR PHD T D  ++  +
Sbjct: 279 MKRIKELRRPHDSTADYPYSISV 296

[Close]

BLAST of CsGy6G036060 vs. TAIR10
Match: AT4G05497.1 (RNI-like superfamily protein)

HSP 1 Score: 204.1 bits (518), Expect = 1.2e-52
Identity = 111/245 (45.31%), Postives = 155/245 (63.27%), Query Frame = 0


Query: 1   MESNSS---PNSVE-GESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPL 60
           M S+SS   P +++ GE RNW ELP ++TS IL +LG +EIL  AQ VC SWR++C+DP 
Sbjct: 1   MSSSSSSPFPQAMKNGEYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPS 60

Query: 61  MWRVIDMRYP---CDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCN 120
           MWR ID+R      +  ++ Y +E LC +AV  S G L+  NI++      L YI    +
Sbjct: 61  MWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSS 120

Query: 121 QLSRLRLVYCNRISDEGLVEAVSKLPLLEDLELSF-CSFDVETLETLGQNCPGLKSLKLN 180
            L RL +V C  +   G+VEA  KLPLLE+L++++  S   + L+ +GQ+CP L++LKLN
Sbjct: 121 NLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN 180

Query: 181 RQFYRRVECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLN 238
                +  CDK ALAIAE MP LRHL +F N L+  GL AIL+GC  L++L L  C N+N
Sbjct: 181 CTGDVKC-CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNIN 240

[Close]

BLAST of CsGy6G036060 vs. TAIR10
Match: AT4G05470.1 (RNI-like superfamily protein)

HSP 1 Score: 198.7 bits (504), Expect = 5.1e-51
Identity = 114/260 (43.85%), Postives = 152/260 (58.46%), Query Frame = 0


Query: 16  NWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDYN 75
           NW++LP ++T+ IL +L   +IL  AQ VC  WR+IC+DP MWR I+ R  C  ++ D+ 
Sbjct: 45  NWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSMWRKINTR-DCLMYNFDF- 104

Query: 76  LEELCRQAVKRSCGQLIHFNI-EHFGTDDLLLYITQSCNQLSRLRLVYC-NRISDEGLVE 135
              +CR  V  S G L+  N+ EHF +D LL YIT     L  L L  C  R++  G+V 
Sbjct: 105 -VSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITD--RNLRSLGLGMCFPRVTKLGVVN 164

Query: 136 AVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNR----------------QFYR 195
           A++K+PLLE LE++     ++ L+ +G  CP LK+LKLN                     
Sbjct: 165 AIAKIPLLETLEVTHSCIKLD-LKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDDMG 224

Query: 196 RVECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQL 255
            +ECD  ALAIAE+MP L HL +  N LTN GL AILDGC  LE LD+R CF ++L G L
Sbjct: 225 PLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVGNL 284

Query: 256 GAKCSEKIKDLRLPHDPTDD 258
             +C E IK+LR P D T D
Sbjct: 285 EKRCLEMIKELRRPGDSTAD 298

[Close]

BLAST of CsGy6G036060 vs. Swiss-Prot
Match: sp|Q9M0U9|SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 4.5e-73
Identity = 151/289 (52.25%), Postives = 191/289 (66.09%), Query Frame = 0


Query: 1   MESNSSPNSV--EGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMW 60
           M S+SSP +    GES NW ELP ++TS IL +LG +EIL  AQ VC SWR++C+DP MW
Sbjct: 1   MASSSSPPAAMEVGESTNWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMW 60

Query: 61  RVIDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRL 120
           R IDM    D  DMDYNLE +CR AV RS G L+   I +FGT DLL YI    + L  L
Sbjct: 61  RKIDMHNLGDLDDMDYNLEIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSL 120

Query: 121 RLVYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRR 180
           RL+ C++I+D+G VEAV KLP LE+LELS+CSF VE+L  +GQ C  +K+LKLN+  + +
Sbjct: 121 RLIRCSQITDDGFVEAVVKLP-LEELELSYCSFSVESLRVVGQCCLNMKTLKLNK--HPQ 180

Query: 181 VECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLG 240
            E D  ALAIAE MP LRHL + GN L++ GL AILD CS LE LDLR CFN+NL G L 
Sbjct: 181 KENDDDALAIAETMPKLRHLQLCGNGLSDTGLNAILDNCSNLEHLDLRRCFNVNLVGDLQ 240

Query: 241 AKCSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLL 288
            +C E +K +R P+D   D +  +   +D+D YD         SD DL+
Sbjct: 241 KRCFESVKVVRHPNDSIHDIDIGSS--EDEDPYD--------FSDIDLM 276

[Close]

BLAST of CsGy6G036060 vs. Swiss-Prot
Match: sp|Q9S9V9|FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 6.8e-69
Identity = 130/242 (53.72%), Postives = 163/242 (67.36%), Query Frame = 0


Query: 15  RNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDY 74
           RNW ELP  +TS IL +LG +EIL  AQ VC  W ++C+DP MWR ID+    D     Y
Sbjct: 179 RNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDRAAFKY 238

Query: 75  NLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISDEGLVEA 134
           +LE +CR AV RS G LI   I ++GT+DL++YI    + L  L LV C  I+DEG+ +A
Sbjct: 239 DLESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCFPITDEGVAKA 298

Query: 135 VSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQ---FYRRVECDKGALAIAEN 194
           VSK+PLLE LE+S+C F  E+L  +G++CP LK+LKLNR     +     D  A AIAE+
Sbjct: 299 VSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGFDDNAKAIAES 358

Query: 195 MPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKDLRLP 254
           MP LRHL + GN LTNKGL AILDGC  LE LDLR CFN+NL G L  +C E+IKDLR P
Sbjct: 359 MPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKKRCFERIKDLRCP 418

[Close]

BLAST of CsGy6G036060 vs. Swiss-Prot
Match: sp|Q9M0U6|FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 2.2e-59
Identity = 130/280 (46.43%), Postives = 173/280 (61.79%), Query Frame = 0


Query: 11  EGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWW 70
           E +  NW ELP D+ S IL +L P+EIL  A+ VC SWR++ +DPL+WR IDMR     +
Sbjct: 21  EEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLIWRRIDMRNLRRLY 80

Query: 71  DMDYNLEELCRQAVKRSCGQLIHFNIE--HFGTDDLLLYITQSCNQLSRLRLVYCNRISD 130
            + Y +E  CR  V  S G L+ FNI+   F T  LL Y+ +  + L RLR V   +I+ 
Sbjct: 81  CI-YAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR-VKGGQITS 140

Query: 131 EGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVECDKGALAI 190
            G+ EA+ KLPLLE+LEL +CS + E  +T+GQ CP LK+LKL   +    E D  ALAI
Sbjct: 141 VGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNESDNDALAI 200

Query: 191 AENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKDL 250
           A+ MP L HL +  N LTN GL AILDGC  LE LDLR CFN+NL G L  +C E+IKD 
Sbjct: 201 ADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQCLERIKDF 260

Query: 251 RLPHDPTDDCE---FTTEIVDDDDTYDDDYDYPFGLSDTD 286
           R P+D  DD     F+     +D+  +++ +Y +G  DT+
Sbjct: 261 RCPNDVLDDYNYVIFSDNGSIEDEKGEEEENYSYGSDDTE 298

[Close]

BLAST of CsGy6G036060 vs. Swiss-Prot
Match: sp|Q9M0U7|FB221_ARATH (Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE=4 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 5.6e-55
Identity = 116/263 (44.11%), Postives = 164/263 (62.36%), Query Frame = 0


Query: 16  NWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDYN 75
           NW++LP ++T+ IL +L   +IL  A+ +C +WR+IC+DP MWR I++R  C  ++ D+ 
Sbjct: 39  NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSMWRKINLR-DCLMYEFDF- 98

Query: 76  LEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYIT-QSCNQLSRLRLVYCNRISDEGLVEA 135
            E +CR  V  S G L+  NIEHF +D LL YI  +SCN L  L +     ++++G++  
Sbjct: 99  -ESMCRHIVDLSQGGLLEINIEHFVSDSLLSYIVDRSCN-LKSLGISIYEPMTNKGVMNG 158

Query: 136 VSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNR------------QFYRRVECD 195
           + KLPLLE L +   S  ++ L+ +G  CP LK+LKLN              +   +ECD
Sbjct: 159 IEKLPLLETLVIFHSSIKLD-LKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPLLECD 218

Query: 196 KGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALES-LDLRHCFNLNLAGQLGAKC 255
             ALAIAE+MP LRHL + GN LTN GL AILDGC  LE  LD+R CFN+NL G L  +C
Sbjct: 219 DDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNLEKRC 278

Query: 256 SEKIKDLRLPHDPTDDCEFTTEI 265
            ++IK+LR PHD T D  ++  +
Sbjct: 279 MKRIKELRRPHDSTADYPYSISV 296

[Close]

BLAST of CsGy6G036060 vs. Swiss-Prot
Match: sp|Q9S9V8|FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.2e-51
Identity = 111/245 (45.31%), Postives = 155/245 (63.27%), Query Frame = 0


Query: 1   MESNSS---PNSVE-GESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPL 60
           M S+SS   P +++ GE RNW ELP ++TS IL +LG +EIL  AQ VC SWR++C+DP 
Sbjct: 1   MSSSSSSPFPQAMKNGEYRNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPS 60

Query: 61  MWRVIDMRYP---CDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCN 120
           MWR ID+R      +  ++ Y +E LC +AV  S G L+  NI++      L YI    +
Sbjct: 61  MWRKIDIRIKENLVNSVELFYVIEPLCCRAVDLSQGGLLEINIDYLVNTSFLNYIADRSS 120

Query: 121 QLSRLRLVYCNRISDEGLVEAVSKLPLLEDLELSF-CSFDVETLETLGQNCPGLKSLKLN 180
            L RL +V C  +   G+VEA  KLPLLE+L++++  S   + L+ +GQ+CP L++LKLN
Sbjct: 121 NLRRLGVVDCAPVLSRGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLN 180

Query: 181 RQFYRRVECDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLN 238
                +  CDK ALAIAE MP LRHL +F N L+  GL AIL+GC  L++L L  C N+N
Sbjct: 181 CTGDVKC-CDKVALAIAETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQCLNIN 240

[Close]

BLAST of CsGy6G036060 vs. TrEMBL
Match: tr|A0A0A0KIS9|A0A0A0KIS9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525300 PE=4 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 1.7e-178
Identity = 310/311 (99.68%), Postives = 310/311 (99.68%), Query Frame = 0


Query: 1   MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60
           MESN SPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV
Sbjct: 1   MESNLSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60

Query: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120
           IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL
Sbjct: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120

Query: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180
           VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE
Sbjct: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180

Query: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240
           CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK
Sbjct: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240

Query: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300
           CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS
Sbjct: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300

Query: 301 DFSDYTDLYFY 312
           DFSDYTDLYFY
Sbjct: 301 DFSDYTDLYFY 311

[Close]

BLAST of CsGy6G036060 vs. TrEMBL
Match: tr|A0A1S3AZQ4|A0A1S3AZQ4_CUCME (F-box protein SKIP19-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484331 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 1.2e-171
Identity = 295/311 (94.86%), Postives = 304/311 (97.75%), Query Frame = 0


Query: 1   MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60
           MESNS+PNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV
Sbjct: 1   MESNSNPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60

Query: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120
           IDMRYPCDWWDMDY+LEE+CRQAVKRSCG+LIH NIEHFGTDDLL YITQSCNQLSRLRL
Sbjct: 61  IDMRYPCDWWDMDYDLEEMCRQAVKRSCGELIHINIEHFGTDDLLRYITQSCNQLSRLRL 120

Query: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180
           VYCNRISDEGL+EAVSKLPLLEDLELSFCSF+VETL TLGQNCPGLKSLKLNRQFYRRVE
Sbjct: 121 VYCNRISDEGLIEAVSKLPLLEDLELSFCSFNVETLGTLGQNCPGLKSLKLNRQFYRRVE 180

Query: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240
           CDKGALAIA+NMPNLRHLHIFGNNLTN+GLEAIL GCSALESLDLR CFNLNLAGQLGAK
Sbjct: 181 CDKGALAIADNMPNLRHLHIFGNNLTNRGLEAILHGCSALESLDLRQCFNLNLAGQLGAK 240

Query: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300
           CSEKIKDLRLPHDPTDDCEFTTEI+DDDD YDDDYDYPFGLSDTDLL XXXXXYEFSGGS
Sbjct: 241 CSEKIKDLRLPHDPTDDCEFTTEIIDDDDNYDDDYDYPFGLSDTDLLTXXXXXYEFSGGS 300

Query: 301 DFSDYTDLYFY 312
           DFSDYTDLYFY
Sbjct: 301 DFSDYTDLYFY 311

[Close]

BLAST of CsGy6G036060 vs. TrEMBL
Match: tr|A0A1S4DTF8|A0A1S4DTF8_CUCME (F-box protein SKIP19-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484331 PE=4 SV=1)

HSP 1 Score: 592.0 bits (1525), Expect = 7.6e-166
Identity = 289/311 (92.93%), Postives = 298/311 (95.82%), Query Frame = 0


Query: 1   MESNSSPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60
           MESNS+PNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV
Sbjct: 1   MESNSNPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRV 60

Query: 61  IDMRYPCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRL 120
           IDMRYPCDWWDMDY+LEE+CRQAVKRSCG+LIH NIEHFGTDDLL YITQ      RLRL
Sbjct: 61  IDMRYPCDWWDMDYDLEEMCRQAVKRSCGELIHINIEHFGTDDLLRYITQ------RLRL 120

Query: 121 VYCNRISDEGLVEAVSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYRRVE 180
           VYCNRISDEGL+EAVSKLPLLEDLELSFCSF+VETL TLGQNCPGLKSLKLNRQFYRRVE
Sbjct: 121 VYCNRISDEGLIEAVSKLPLLEDLELSFCSFNVETLGTLGQNCPGLKSLKLNRQFYRRVE 180

Query: 181 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 240
           CDKGALAIA+NMPNLRHLHIFGNNLTN+GLEAIL GCSALESLDLR CFNLNLAGQLGAK
Sbjct: 181 CDKGALAIADNMPNLRHLHIFGNNLTNRGLEAILHGCSALESLDLRQCFNLNLAGQLGAK 240

Query: 241 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 300
           CSEKIKDLRLPHDPTDDCEFTTEI+DDDD YDDDYDYPFGLSDTDLL XXXXXYEFSGGS
Sbjct: 241 CSEKIKDLRLPHDPTDDCEFTTEIIDDDDNYDDDYDYPFGLSDTDLLTXXXXXYEFSGGS 300

Query: 301 DFSDYTDLYFY 312
           DFSDYTDLYFY
Sbjct: 301 DFSDYTDLYFY 305

[Close]

BLAST of CsGy6G036060 vs. TrEMBL
Match: tr|A0A251JDM0|A0A251JDM0_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G135100 PE=4 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 4.5e-94
Identity = 179/298 (60.07%), Postives = 211/298 (70.81%), Query Frame = 0


Query: 15  RNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRYPCDWWDMDY 74
           RNW+ELP D+T+ IL KLG VEIL  AQ VCSSWR IC+DP MWR IDMR   D WDMDY
Sbjct: 13  RNWVELPRDITASILLKLGAVEILNTAQLVCSSWRSICKDPSMWRSIDMRNLGDLWDMDY 72

Query: 75  NLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNRISDEGLVEA 134
           +LE++CR AV RS G L+  +I++FGTDDLL YI    + L RLRLV C  ISDEGL E 
Sbjct: 73  DLEKMCRHAVDRSSGGLVDIDIQYFGTDDLLQYIADRSSHLKRLRLVSCYSISDEGLSEV 132

Query: 135 VSKLPLLEDLELSFCSFDVETLETLGQNCPGLKSLKLNRQFYR--RVECDKGALAIAENM 194
            +K PLLE+L++S+CS   + LE +G  CP LKS KLN   ++  R EC++ AL IAENM
Sbjct: 133 ATKFPLLEELDISYCSLSKQALEVVGHCCPLLKSFKLNNHGFKHPRTECNEEALVIAENM 192

Query: 195 PNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAKCSEKIKDLRLPH 254
           P+L  L IFGN LTN+GL+AILDGC  LESLDLR CFN+NL G LG +C E+IKDLR P+
Sbjct: 193 PHLCCLQIFGNKLTNEGLQAILDGCPNLESLDLRQCFNVNLEGHLGKRCIERIKDLRRPY 252

Query: 255 DPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGSDFSDYTDLYF 311
           DPTDD  F TEI    D    + DYP GLS+ D L      YEFSGGSD SDY DL F
Sbjct: 253 DPTDDYPFDTEIA---DVGSSEEDYPSGLSEIDFLSDDDDYYEFSGGSDMSDYGDLVF 307

[Close]

BLAST of CsGy6G036060 vs. TrEMBL
Match: tr|A0A2I4GUY1|A0A2I4GUY1_9ROSI (F-box protein SKIP19-like OS=Juglans regia OX=51240 GN=LOC109011088 PE=4 SV=1)

HSP 1 Score: 345.1 bits (884), Expect = 1.6e-91
Identity = 178/311 (57.23%), Postives = 213/311 (68.49%), Query Frame = 0


Query: 6   SPNSVEGESRNWLELPVDVTSMILQKLGPVEILTYAQYVCSSWRKICEDPLMWRVIDMRY 65
           SP    G+ RNWLELP DVT  IL +LG +EILT AQ VC  WR IC+DP MWR +DMR 
Sbjct: 9   SPPQPPGQCRNWLELPRDVTESILLRLGAIEILTSAQKVCLLWRNICKDPSMWRAVDMRN 68

Query: 66  PCDWWDMDYNLEELCRQAVKRSCGQLIHFNIEHFGTDDLLLYITQSCNQLSRLRLVYCNR 125
             D+WDM Y+LE +CR AV RSCGQL+  N+E+FGTD+LL YI    ++L RLRLV C+ 
Sbjct: 69  HGDFWDMPYDLETMCRHAVDRSCGQLVDINVEYFGTDELLNYIADCSSRLRRLRLVSCHS 128

Query: 126 ISDEGLVEAVSKLPLLEDLELSFCSF---DVETLETLGQNCPGLKSLKLNRQFYRR--VE 185
           IS+EGL EA +KLPLLE+L +S+CS+     E L+ +G+ CP LKSLKLN + +RR  +E
Sbjct: 129 ISEEGLSEAAAKLPLLEELNISYCSYWSLTKEPLDVVGRCCPLLKSLKLNSKGHRRPYIE 188

Query: 186 CDKGALAIAENMPNLRHLHIFGNNLTNKGLEAILDGCSALESLDLRHCFNLNLAGQLGAK 245
           CD+ ALAIAENMP LR L +FGN LTN GL AILDGC  LESLDLR CFN+NL G LG +
Sbjct: 189 CDEEALAIAENMPELRQLQVFGNKLTNDGLLAILDGCPHLESLDLRQCFNVNLTGNLGRR 248

Query: 246 CSEKIKDLRLPHDPTDDCEFTTEIVDDDDTYDDDYDYPFGLSDTDLLXXXXXXYEFSGGS 305
           C+E+IK LR P DPTDD E         D    D D P G SD D        YEFSG S
Sbjct: 249 CAEQIKHLRFPTDPTDDIEI-------HDNGSSDEDCPSGFSDIDYFSDDYGYYEFSGDS 308

Query: 306 DFSDYTDLYFY 312
           D+S Y D+  Y
Sbjct: 309 DYSYYGDIIDY 312

The following BLAST results are available for this feature:

BLAST of CsGy6G036060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004134625.1	2.6e-178	99.68	PREDICTED: F-box protein SKIP19-like [Cucumis sativus] >KGN49443.1 hypothetical ...	[more]
XP_008439578.1	1.8e-171	94.86	PREDICTED: F-box protein SKIP19-like isoform X1 [Cucumis melo]	[more]
XP_016899274.1	1.1e-165	92.93	PREDICTED: F-box protein SKIP19-like isoform X2 [Cucumis melo]	[more]
XP_023543623.1	1.4e-147	83.92	F-box protein SKIP19-like [Cucurbita pepo subsp. pepo]	[more]
XP_022925897.1	9.1e-147	83.60	F-box protein SKIP19-like isoform X1 [Cucurbita moschata]	[more]

BLAST of CsGy6G036060 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G05460.1	2.5e-74	52.25	RNI-like superfamily protein	[more]
AT4G05490.1	1.2e-60	46.43	RNI-like superfamily protein	[more]
AT4G05475.1	3.1e-56	44.11	RNI-like superfamily protein	[more]
AT4G05497.1	1.2e-52	45.31	RNI-like superfamily protein	[more]
AT4G05470.1	5.1e-51	43.85	RNI-like superfamily protein	[more]

BLAST of CsGy6G036060 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9M0U9\|SKI19_ARATH	4.5e-73	52.25	F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1	[more]
sp\|Q9S9V9\|FBL23_ARATH	6.8e-69	53.72	Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE...	[more]
sp\|Q9M0U6\|FBL22_ARATH	2.2e-59	46.43	Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE...	[more]
sp\|Q9M0U7\|FB221_ARATH	5.6e-55	44.11	Putative F-box protein At4g05475 OS=Arabidopsis thaliana OX=3702 GN=At4g05475 PE...	[more]
sp\|Q9S9V8\|FBL9_ARATH	2.2e-51	45.31	Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4...	[more]

BLAST of CsGy6G036060 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KIS9\|A0A0A0KIS9_CUCSA	1.7e-178	99.68	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525300 PE=4 SV=1	[more]
tr\|A0A1S3AZQ4\|A0A1S3AZQ4_CUCME	1.2e-171	94.86	F-box protein SKIP19-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484331 PE=...	[more]
tr\|A0A1S4DTF8\|A0A1S4DTF8_CUCME	7.6e-166	92.93	F-box protein SKIP19-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484331 PE=...	[more]
tr\|A0A251JDM0\|A0A251JDM0_MANES	4.5e-94	60.07	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G135100 PE=4 SV=...	[more]
tr\|A0A2I4GUY1\|A0A2I4GUY1_9ROSI	1.6e-91	57.23	F-box protein SKIP19-like OS=Juglans regia OX=51240 GN=LOC109011088 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR001810	F-box_dom
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf
IPR006553	Leu-rich_rpt_Cys-con_subtyp

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G036060.1	CsGy6G036060.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006553	Leucine-rich repeat, cysteine-containing subtype	SMART	SM00367	LRR_CC_2	coord: 88..111 e-value: 320.0 score: 2.8 coord: 112..137 e-value: 0.048 score: 22.8 coord: 217..240 e-value: 220.0 score: 4.1 coord: 192..216 e-value: 26.0 score: 11.4 coord: 138..162 e-value: 97.0 score: 6.8
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 71..268 e-value: 7.2E-32 score: 112.3
None	No IPR available	GENE3D	G3DSA:1.20.1280.50		coord: 16..58 e-value: 2.2E-8 score: 35.9
None	No IPR available	PANTHER	PTHR44078	FAMILY NOT NAMED	coord: 10..276
None	No IPR available	PANTHER	PTHR44078:SF5	F-BOX PROTEIN SKIP19-RELATED	coord: 10..276
None	No IPR available	SUPERFAMILY	SSF52047	RNI-like	coord: 37..232
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 112..132 e-value: 1.2 score: 9.3 coord: 192..213 e-value: 5.5E-4 score: 19.7
IPR001810	F-box domain	PFAM	PF12937	F-box-like	coord: 17..62 e-value: 7.4E-7 score: 28.9
IPR001810	F-box domain	PROSITE	PS50181	FBOX	coord: 14..61 score: 10.425

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G036060	Watermelon (97103) v2	cgybwmbB394
CsGy6G036060	Wax gourd	cgybwgoB590
CsGy6G036060	Cucurbita maxima (Rimu)	cgybcmaB830
CsGy6G036060	Cucurbita maxima (Rimu)	cgybcmaB861
CsGy6G036060	Cucurbita moschata (Rifu)	cgybcmoB809
CsGy6G036060	Cucurbita moschata (Rifu)	cgybcmoB843
CsGy6G036060	Cucurbita pepo (Zucchini)	cgybcpeB713
CsGy6G036060	Cucurbita pepo (Zucchini)	cgybcpeB810
CsGy6G036060	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G036060	Bottle gourd (USVL1VR-Ls)	cgyblsiB398
CsGy6G036060	Melon (DHL92) v3.5.1	cgybmeB445
CsGy6G036060	Melon (DHL92) v3.6.1	cgybmedB442
CsGy6G036060	Watermelon (Charleston Gray)	cgybwcgB399
CsGy6G036060	Watermelon (97103) v1	cgybwmB468
CsGy6G036060	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G036060	Silver-seed gourd	carcgybB0312
CsGy6G036060	Silver-seed gourd	carcgybB0726
CsGy6G036060	Cucumber (Chinese Long) v3	cgybcucB298