CsGy6G036030 (gene) Cucumber (Gy14) v2

NameCsGy6G036030
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionPutative F-box/LRR-repeat protein 23
LocationChr6 : 31649514 .. 31650408 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATGTGTGCAAGCGGGCTGTTGATCGTGGTTGTGATCGGTCGACATGAATATTGAGCATTTTGGCTCTGATGAGTTGCTCCGATACATCGCTATCAGGTAACCATTGCCTGTGCGTCATGAACTTGTGGTTTTAAGTTAGTTTTGAAATCACAGATAGTCTATTTTATACATGTTTCTTAGTTATATTTTATAAATTTTATCTAATTTTCTGTCTTTGTTGATCATGAGTTACGTACACATTTACTTATCCAGTTCAAATCAAGTTAGAAAACGTCGGGTTACAGTAAACAAATGATGGATTGAGAGCAGCAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGGTTGA

mRNA sequence

ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATGTGTGCAAGCGGGCTGTTGATCGTGGTTGTGATCGTTTTGAAATCACAGATAGTCTATTTTATACATGTTTCTTACAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGGTTGA

Coding sequence (CDS)

ATGATCCGGAAGCGGGAAGCCCCAGCGAGGAATTGGCTTGAACTGCCTGCAGAAGTACTCCTTGTGATTCTGCAGAAGTTAGGGGCTGTTGAAATACTAACCACCGCTCAAAATGTCTGTTCTTTGTTGTATAAGATCTGCAAGGATCCTTTCTTGTGGCGTGTCATCAATTTCGACTATTGGAATCGTGTGCACAATTTCGAAGATTGGAATCGTTTGTTTTATTGGAAAAATGTGTGCAAGCGGGCTGTTGATCGTGGTTGTGATCGTTTTGAAATCACAGATAGTCTATTTTATACATGTTTCTTACAGTTTGGGATCTTCCATTGTTGGAGCATCTTGAAAATTGAATCATTACAAATTGGACTTGAACCCAAAACTTTGAGAACTATTGGACGATGTTGCCATTTACTGAAATCGCTTAAACTAAGAGAGGCAGCTATTGCGACCTTTGAAGTGCCGCTTGCTATTGCTAAACATATGCCCAAGTTACATCATCTTGAAATTGTGGGCATTTGCATAACCAACCTTGGTTTGCATGCCCTTCTTGTTAGATGTTCTGATTTACAATCTCTTGACTTAAGCGAGAGTTGGCTTATGGATTTTGACGAACACTTGAAAGAAAATGTGAAAGGCTCAAAACTTTTGCGTCAAATCGGTTGA

Protein sequence

MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLWRVINFDYWNRVHNFEDWNRLFYWKNVCKRAVDRGCDRFEITDSLFYTCFLQFGIFHCWSILKIESLQIGLEPKTLRTIGRCCHLLKSLKLREAAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHLKENVKGSKLLRQIG
BLAST of CsGy6G036030 vs. NCBI nr
Match: XP_011658525.1 (PREDICTED: putative F-box/LRR-repeat protein 23 [Cucumis sativus] >KGN49440.1 hypothetical protein Csa_6G525270 [Cucumis sativus])

HSP 1 Score: 197.2 bits (500), Expect = 5.8e-47
Identity = 120/244 (49.18%), Postives = 141/244 (57.79%), Query Frame = 0

Query: 1   MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXX 60
           MI+KRE PARNWLELPAEV+ VIL KLGA+EILTTAQNVCSL YKICKDPFL        
Sbjct: 1   MIQKREVPARNWLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHN 60

Query: 61  XXXXXXXXXXXXXXXWKNVCKRAVDRGC--------DRFEITDSLFYTC----------F 120
                           + +CK AVDR C        + F   + L Y             
Sbjct: 61  SGDLNSFDHL------EIMCKHAVDRSCGQLVEINIEHFGSDELLLYIANSSKQVRRLRL 120

Query: 121 LQFGIFHCWSI-------------LKIESLQIGLEPKTLRTIGRCCHLLKSLKLREAAIA 180
           + + ++    +             L+I+S  IGL+P+TLRTIGRCCHLLKSLKL+E    
Sbjct: 121 MGYSLYFTKEVLGVAVSELPLLEHLEIQSFIIGLDPETLRTIGRCCHLLKSLKLKELCYI 180

Query: 181 TF-----EVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDE 209
            F     E  LAIA+ MP LHHLEIVG  ITN GLHALL  CS LQSLDL +   +DFDE
Sbjct: 181 GFISSSDEDALAIAETMPNLHHLEIVGNSITNFGLHALLDSCSGLQSLDLRKCMYLDFDE 238

BLAST of CsGy6G036030 vs. NCBI nr
Match: KGN49441.1 (hypothetical protein Csa_6G525280 [Cucumis sativus])

HSP 1 Score: 131.0 bits (328), Expect = 5.1e-27
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query: 1  MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXX 60
          MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXX
Sbjct: 6  MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXX 65

Query: 61 XXXXXXXXXXXXXXXWKNVCKRAVDRGCDR 91
          XXXXXXXXXXXXXXXWKNVCKRAVDRGCDR
Sbjct: 66 XXXXXXXXXXXXXXXWKNVCKRAVDRGCDR 95

BLAST of CsGy6G036030 vs. NCBI nr
Match: XP_022146630.1 (F-box protein SKIP19-like [Momordica charantia])

HSP 1 Score: 121.3 bits (303), Expect = 4.0e-24
Identity = 87/226 (38.50%), Postives = 116/226 (51.33%), Query Frame = 0

Query: 9   ARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXX 68
           ARNWLELPA++  +IL KLGA+EIL++AQ+VCSL  KICKDP +                
Sbjct: 11  ARNWLELPADITSMILLKLGAIEILSSAQSVCSLWRKICKDPLMWRVVDMHNMGEWDMDY 70

Query: 69  XXXXXXXWKNVCKRAVDRGC-DRFEITDSLFYTCFL------------QFGIFHCWSILK 128
                   + +C +AVDR C +  +I    F T  L            +  I  C SI  
Sbjct: 71  DL------EQMCIQAVDRSCGELIDINIQYFGTNELLQYITQSSNQLRRLRIVRCHSITD 130

Query: 129 ------------IESLQIGL---EPKTLRTIGRCCHLLKSLKL-----REAAIATFEVPL 188
                       +E L+I L     KTL T+GRCC LLKSLKL     R   I      +
Sbjct: 131 TGLSEAVSKLPLLEHLEISLCSFTEKTLETVGRCCRLLKSLKLDCQDCRRGMIDCDRDAI 190

Query: 189 AIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMD 202
           AIA++MP L +L+I G  +T+ GL A+L  C DL+SLDL + + +D
Sbjct: 191 AIAENMPNLRYLQIFGSSLTDRGLQAILDGCPDLESLDLRQCFNLD 230

BLAST of CsGy6G036030 vs. NCBI nr
Match: XP_022146724.1 (putative F-box/LRR-repeat protein 23 [Momordica charantia])

HSP 1 Score: 112.1 bits (279), Expect = 2.5e-21
Identity = 86/250 (34.40%), Postives = 119/250 (47.60%), Query Frame = 0

Query: 6   EAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXX 65
           E PARNWLELPA+   +IL KLGAV+IL+ AQ VCSL  KIC DP +             
Sbjct: 10  EEPARNWLELPADTTSMILMKLGAVDILSNAQIVCSLWRKICYDPLMWRVVDMRNLDDSL 69

Query: 66  XXXXXXXXXXWKNVCKRAVDRGC--------DRFEITDSLFYTC-----FLQFGIFHCWS 125
                      + +C +AVDR C        +RF   + L Y         +  + +C  
Sbjct: 70  DMDKDL-----EKMCMQAVDRSCGQLVDINIERFGTDELLHYIAQSSNQLRRLRLVYCHD 129

Query: 126 IL------------KIESLQI-----GLEPKTLRTIGRCCHLLKSLKLRE------AAIA 185
           I              +E L+I       + +TL+T+GRCC LL SLKL          + 
Sbjct: 130 ISGKGLAEAVPKLPLLEDLEIFFSFDSFDMETLKTVGRCCPLLNSLKLHNRNCKGPRLMG 189

Query: 186 TFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHLKEN 220
             E  LAIA++MP L HL I    +T+LGL A+L  C  L+SLDL     ++    L++ 
Sbjct: 190 CDEEALAIAENMPNLRHLGIFSNSLTDLGLQAILDGCPYLESLDLRHCLNLNLGGQLEK- 249

BLAST of CsGy6G036030 vs. NCBI nr
Match: XP_023543623.1 (F-box protein SKIP19-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 111.7 bits (278), Expect = 3.2e-21
Identity = 85/242 (35.12%), Postives = 117/242 (48.35%), Query Frame = 0

Query: 9   ARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXX 68
           ARNWLELPA+V  +IL KLG V+ILT AQ+VCS   KIC+DP +                
Sbjct: 16  ARNWLELPADVTSMILLKLGPVDILTNAQDVCSSWRKICEDPLMWRVVDMRYSGDWWDMD 75

Query: 69  XXXXXXXWKNVCKRAVDRGC--------DRFEITDSLFYTC-----FLQFGIFHCWSILK 128
                   + +C++AVDR C        + F   D L Y         +  + +C  I  
Sbjct: 76  YDL-----EEMCRQAVDRSCGQLIYINIEHFGTDDLLHYITQSSNQLRKLRLVYCNRISD 135

Query: 129 ------------IESLQI---GLEPKTLRTIGRCCHLLKSLKLREAAIATFEV---PLAI 188
                       +E L+I     + +TL T+G+C  LLKSLKL        E     LAI
Sbjct: 136 EGLIKAVSKLPLLEDLEISFGSFDVETLETLGQCRPLLKSLKLNRQFYRRVECDKGALAI 195

Query: 189 AKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHL----KENVKGS 216
           A++MP L HL+I G  +TN GL A+L  C DL+SLDL + + ++    L     E +K  
Sbjct: 196 AENMPNLRHLQIFGNSLTNRGLEAILDGCPDLESLDLRQCFNLNLAGQLGAKCSEKIKNL 252

BLAST of CsGy6G036030 vs. TAIR10
Match: AT4G05460.1 (RNI-like superfamily protein)

HSP 1 Score: 87.4 bits (215), Expect = 1.2e-17
Identity = 67/212 (31.60%), Postives = 98/212 (46.23%), Query Frame = 0

Query: 11  NWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXXX 70
           NW ELP E+   IL +LGA+EIL  AQ VC    ++CKDP +                  
Sbjct: 18  NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYN 77

Query: 71  XXXXXWKNVCKRAVDR--------GCDRFEITDSLFYTC-----FLQFGIFHCWSI---- 130
                 + +C+ AVDR        G   F   D L Y            +  C  I    
Sbjct: 78  L-----EIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDG 137

Query: 131 -------LKIESLQI---GLEPKTLRTIGRCCHLLKSLKL-REAAIATFEVPLAIAKHMP 190
                  L +E L++       ++LR +G+CC  +K+LKL +       +  LAIA+ MP
Sbjct: 138 FVEAVVKLPLEELELSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKENDDDALAIAETMP 197

Query: 191 KLHHLEIVGICITNLGLHALLVRCSDLQSLDL 195
           KL HL++ G  +++ GL+A+L  CS+L+ LDL
Sbjct: 198 KLRHLQLCGNGLSDTGLNAILDNCSNLEHLDL 224

BLAST of CsGy6G036030 vs. TAIR10
Match: AT4G05497.1 (RNI-like superfamily protein)

HSP 1 Score: 71.6 bits (174), Expect = 6.7e-13
Identity = 65/219 (29.68%), Postives = 96/219 (43.84%), Query Frame = 0

Query: 10  RNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXX 69
           RNW ELP E+   IL +LGA+EIL  AQ VC    ++C+DP +                 
Sbjct: 19  RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVE 78

Query: 70  XXXXXXWKNVCKRAVD---RGCDRFEITDSLFYTCFLQF-----------GIFHCWSILK 129
                  + +C RAVD    G     I D L  T FL +           G+  C  +L 
Sbjct: 79  LFYVI--EPLCCRAVDLSQGGLLEINI-DYLVNTSFLNYIADRSSNLRRLGVVDCAPVLS 138

Query: 130 ------------IESLQI----GLEPKTLRTIGRCCHLLKSLKLREAAIATF--EVPLAI 189
                       +E L I     +  + L+ +G+ C  L++LKL          +V LAI
Sbjct: 139 RGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAI 198

Query: 190 AKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSE 197
           A+ MP L HL++    ++  GL+A+L  C  L++L L +
Sbjct: 199 AETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQ 234

BLAST of CsGy6G036030 vs. TAIR10
Match: AT4G05490.1 (RNI-like superfamily protein)

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-12
Identity = 67/246 (27.24%), Postives = 100/246 (40.65%), Query Frame = 0

Query: 2   IRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXX 61
           + K E    NW ELP ++L  IL +L  +EIL  A+ VC    ++ KDP +         
Sbjct: 17  VMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLI------WRR 76

Query: 62  XXXXXXXXXXXXXXWKNVCKRAVDRGCD----------RFEITDSLFYTC---------- 121
                          +  C+  VD              RF+ T  L Y            
Sbjct: 77  IDMRNLRRLYCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR 136

Query: 122 -----FLQFGIFHCWSIL----KIESLQIGLEPKTLRTIGRCCHLLKSLKL---REAAIA 181
                    GIF     L    ++E L   +E +  +TIG+ C  LK+LKL         
Sbjct: 137 VKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNE 196

Query: 182 TFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLM----DFDEH 212
           +    LAIA  MP L HL+++   +TN+GL+A+L  C  L+ LDL + + +    D +  
Sbjct: 197 SDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQ 256

BLAST of CsGy6G036030 vs. TAIR10
Match: AT4G05470.1 (RNI-like superfamily protein)

HSP 1 Score: 66.2 bits (160), Expect = 2.8e-11
Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 0

Query: 11  NWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXXX 70
           NW++LP E+   IL +L   +IL  AQ VC    +ICKDP +                  
Sbjct: 45  NWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSM--------WRKINTRDCL 104

Query: 71  XXXXXWKNVCKRAVDR--------GCDRFEITDSLFY-------------TCF---LQFG 130
                + ++C+  VD           D   ++DSL                CF    + G
Sbjct: 105 MYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGMCFPRVTKLG 164

Query: 131 IFHCWS-ILKIESLQI--GLEPKTLRTIGRCCHLLKSLKLRE------------------ 190
           + +  + I  +E+L++        L+ IG  C  LK+LKL                    
Sbjct: 165 VVNAIAKIPLLETLEVTHSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDD 224

Query: 191 -AAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDE 209
              +   +  LAIA+ MPKLHHL+++   +TN GL+A+L  C  L+ LD+ + + +    
Sbjct: 225 MGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVG 280

BLAST of CsGy6G036030 vs. TAIR10
Match: AT4G05475.1 (RNI-like superfamily protein)

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-09
Identity = 64/253 (25.30%), Postives = 108/253 (42.69%), Query Frame = 0

Query: 11  NWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXXX 70
           NW++LP E+   IL +L   +IL  A+ +C    +ICKDP +                  
Sbjct: 39  NWVDLPPELTTSILLRLSVTDILDNARKLCRAWRRICKDPSM--------WRKINLRDCL 98

Query: 71  XXXXXWKNVCKRAVDR--------GCDRFEITDSLF-----YTCFLQFGIFHCWSILKIE 130
                ++++C+  VD           + F ++DSL       +C L+      +  +  +
Sbjct: 99  MYEFDFESMCRHIVDLSQGGLLEINIEHF-VSDSLLSYIVDRSCNLKSLGISIYEPMTNK 158

Query: 131 SLQIGLE---------------PKTLRTIGRCCHLLKSLKLREAA--------------- 190
            +  G+E                  L+ IG  C  LK+LKL                   
Sbjct: 159 GVMNGIEKLPLLETLVIFHSSIKLDLKAIGHACPQLKTLKLNSLGSELAHDISQVGYIPL 218

Query: 191 IATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQS-LDLSESWLMDFDEHL 219
           +   +  LAIA+ MPKL HL+++G  +TN GL+A+L  C  L+  LD+ + + ++   +L
Sbjct: 219 LECDDDALAIAESMPKLRHLQLMGNGLTNTGLNAILDGCPHLEEHLDVRKCFNINLVGNL 278

BLAST of CsGy6G036030 vs. Swiss-Prot
Match: sp|Q9S9V9|FBL23_ARATH (Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE=4 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 1.9e-17
Identity = 72/238 (30.25%), Postives = 111/238 (46.64%), Query Frame = 0

Query: 5   REAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXX 64
           ++   RNW ELP+++   IL +LGA+EIL  AQ VC   +++CKDP +            
Sbjct: 174 KDKKLRNWAELPSKLTSSILLRLGAIEILQNAQKVCKPWHRVCKDPSMWRKIDIDNRNDR 233

Query: 65  XXXXXXXXXXXWKNVCKRAVDR---GCDRFEI-----TDSLFYTC-----FLQFGIFHCW 124
                       +++C+ AVDR   G    EI      D + Y           G+  C+
Sbjct: 234 AAFKYDL-----ESMCRHAVDRSHGGLIEIEIWYYGTNDLIMYIADRSSNLKSLGLVRCF 293

Query: 125 SILK------------IESLQIG---LEPKTLRTIGRCCHLLKSLKLREAAIATF----- 184
            I              +E L++       ++LR IGR C  LK+LKL  A    F     
Sbjct: 294 PITDEGVAKAVSKVPLLEYLEVSYCLFSGESLRDIGRSCPNLKTLKLNRAPEIMFSNSGF 353

Query: 185 -EVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHLKE 209
            +   AIA+ MP+L HL+++G  +TN GL+A+L  C  L+ LDL + + ++    LK+
Sbjct: 354 DDNAKAIAESMPELRHLQLLGNGLTNKGLNAILDGCPHLEHLDLRQCFNINLVGDLKK 406

BLAST of CsGy6G036030 vs. Swiss-Prot
Match: sp|Q9M0U9|SKI19_ARATH (F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-16
Identity = 67/212 (31.60%), Postives = 98/212 (46.23%), Query Frame = 0

Query: 11  NWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXXX 70
           NW ELP E+   IL +LGA+EIL  AQ VC    ++CKDP +                  
Sbjct: 18  NWTELPPELTSAILHRLGAIEILENAQKVCRSWRRVCKDPSMWRKIDMHNLGDLDDMDYN 77

Query: 71  XXXXXWKNVCKRAVDR--------GCDRFEITDSLFYTC-----FLQFGIFHCWSI---- 130
                 + +C+ AVDR        G   F   D L Y            +  C  I    
Sbjct: 78  L-----EIMCRHAVDRSQGGLVDIGIWYFGTVDLLNYIAHRSSNLRSLRLIRCSQITDDG 137

Query: 131 -------LKIESLQI---GLEPKTLRTIGRCCHLLKSLKL-REAAIATFEVPLAIAKHMP 190
                  L +E L++       ++LR +G+CC  +K+LKL +       +  LAIA+ MP
Sbjct: 138 FVEAVVKLPLEELELSYCSFSVESLRVVGQCCLNMKTLKLNKHPQKENDDDALAIAETMP 197

Query: 191 KLHHLEIVGICITNLGLHALLVRCSDLQSLDL 195
           KL HL++ G  +++ GL+A+L  CS+L+ LDL
Sbjct: 198 KLRHLQLCGNGLSDTGLNAILDNCSNLEHLDL 224

BLAST of CsGy6G036030 vs. Swiss-Prot
Match: sp|Q9S9V8|FBL9_ARATH (Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.2e-11
Identity = 65/219 (29.68%), Postives = 96/219 (43.84%), Query Frame = 0

Query: 10  RNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXX 69
           RNW ELP E+   IL +LGA+EIL  AQ VC    ++C+DP +                 
Sbjct: 19  RNWAELPPELTSSILLRLGAIEILQNAQRVCKSWRRVCQDPSMWRKIDIRIKENLVNSVE 78

Query: 70  XXXXXXWKNVCKRAVD---RGCDRFEITDSLFYTCFLQF-----------GIFHCWSILK 129
                  + +C RAVD    G     I D L  T FL +           G+  C  +L 
Sbjct: 79  LFYVI--EPLCCRAVDLSQGGLLEINI-DYLVNTSFLNYIADRSSNLRRLGVVDCAPVLS 138

Query: 130 ------------IESLQI----GLEPKTLRTIGRCCHLLKSLKLREAAIATF--EVPLAI 189
                       +E L I     +  + L+ +G+ C  L++LKL          +V LAI
Sbjct: 139 RGVVEAAMKLPLLEELDITYKSSIREQELKVVGQSCPNLRTLKLNCTGDVKCCDKVALAI 198

Query: 190 AKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSE 197
           A+ MP L HL++    ++  GL+A+L  C  L++L L +
Sbjct: 199 AETMPGLRHLQLFRNGLSETGLNAILEGCPHLKNLGLHQ 234

BLAST of CsGy6G036030 vs. Swiss-Prot
Match: sp|Q9M0U6|FBL22_ARATH (Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE=4 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 6.0e-11
Identity = 67/246 (27.24%), Postives = 100/246 (40.65%), Query Frame = 0

Query: 2   IRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXX 61
           + K E    NW ELP ++L  IL +L  +EIL  A+ VC    ++ KDP +         
Sbjct: 17  VMKGEEKPSNWAELPPDLLSSILLRLSPLEILENARKVCRSWRRVSKDPLI------WRR 76

Query: 62  XXXXXXXXXXXXXXWKNVCKRAVDRGCD----------RFEITDSLFYTC---------- 121
                          +  C+  VD              RF+ T  L Y            
Sbjct: 77  IDMRNLRRLYCIYAMEACCRHVVDLSQGGLLEFNIDQWRFQTTSLLNYMAERSSNLRRLR 136

Query: 122 -----FLQFGIFHCWSIL----KIESLQIGLEPKTLRTIGRCCHLLKSLKL---REAAIA 181
                    GIF     L    ++E L   +E +  +TIG+ C  LK+LKL         
Sbjct: 137 VKGGQITSVGIFEAIVKLPLLEELELLYCSIEEEHFKTIGQACPNLKTLKLVGFWSHLNE 196

Query: 182 TFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLM----DFDEH 212
           +    LAIA  MP L HL+++   +TN+GL+A+L  C  L+ LDL + + +    D +  
Sbjct: 197 SDNDALAIADTMPGLLHLQLISNGLTNIGLNAILDGCPHLECLDLRQCFNINLFGDLERQ 256

BLAST of CsGy6G036030 vs. Swiss-Prot
Match: sp|Q9M0U8|FBL21_ARATH (Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 5.1e-10
Identity = 63/244 (25.82%), Postives = 103/244 (42.21%), Query Frame = 0

Query: 11  NWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXXX 70
           NW++LP E+   IL +L   +IL  AQ VC    +ICKDP +                  
Sbjct: 45  NWVDLPPELTTSILLRLSLTDILDNAQKVCKEWRRICKDPSM--------WRKINTRDCL 104

Query: 71  XXXXXWKNVCKRAVDR--------GCDRFEITDSLFY-------------TCF---LQFG 130
                + ++C+  VD           D   ++DSL                CF    + G
Sbjct: 105 MYNFDFVSMCRHIVDLSQGGLLEINVDEHFLSDSLLSYITDRNLRSLGLGMCFPRVTKLG 164

Query: 131 IFHCWS-ILKIESLQI--GLEPKTLRTIGRCCHLLKSLKLRE------------------ 190
           + +  + I  +E+L++        L+ IG  C  LK+LKL                    
Sbjct: 165 VVNAIAKIPLLETLEVTHSCIKLDLKAIGHACPQLKTLKLNSLGRLWPASDKYDSNVLDD 224

Query: 191 -AAIATFEVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDE 209
              +   +  LAIA+ MPKLHHL+++   +TN GL+A+L  C  L+ LD+ + + +    
Sbjct: 225 MGPLECDDDALAIAESMPKLHHLQLMANRLTNTGLNAILDGCPHLEHLDVRKCFRISLVG 280

BLAST of CsGy6G036030 vs. TrEMBL
Match: tr|A0A0A0KI84|A0A0A0KI84_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525270 PE=4 SV=1)

HSP 1 Score: 197.2 bits (500), Expect = 3.8e-47
Identity = 120/244 (49.18%), Postives = 141/244 (57.79%), Query Frame = 0

Query: 1   MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXX 60
           MI+KRE PARNWLELPAEV+ VIL KLGA+EILTTAQNVCSL YKICKDPFL        
Sbjct: 1   MIQKREVPARNWLELPAEVIFVILHKLGAIEILTTAQNVCSLWYKICKDPFLWRVIDMHN 60

Query: 61  XXXXXXXXXXXXXXXWKNVCKRAVDRGC--------DRFEITDSLFYTC----------F 120
                           + +CK AVDR C        + F   + L Y             
Sbjct: 61  SGDLNSFDHL------EIMCKHAVDRSCGQLVEINIEHFGSDELLLYIANSSKQVRRLRL 120

Query: 121 LQFGIFHCWSI-------------LKIESLQIGLEPKTLRTIGRCCHLLKSLKLREAAIA 180
           + + ++    +             L+I+S  IGL+P+TLRTIGRCCHLLKSLKL+E    
Sbjct: 121 MGYSLYFTKEVLGVAVSELPLLEHLEIQSFIIGLDPETLRTIGRCCHLLKSLKLKELCYI 180

Query: 181 TF-----EVPLAIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDE 209
            F     E  LAIA+ MP LHHLEIVG  ITN GLHALL  CS LQSLDL +   +DFDE
Sbjct: 181 GFISSSDEDALAIAETMPNLHHLEIVGNSITNFGLHALLDSCSGLQSLDLRKCMYLDFDE 238

BLAST of CsGy6G036030 vs. TrEMBL
Match: tr|A0A0A0KP25|A0A0A0KP25_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525280 PE=4 SV=1)

HSP 1 Score: 131.0 bits (328), Expect = 3.4e-27
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query: 1  MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXX 60
          MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXX
Sbjct: 6  MIRKREAPARNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXX 65

Query: 61 XXXXXXXXXXXXXXXWKNVCKRAVDRGCDR 91
          XXXXXXXXXXXXXXXWKNVCKRAVDRGCDR
Sbjct: 66 XXXXXXXXXXXXXXXWKNVCKRAVDRGCDR 95

BLAST of CsGy6G036030 vs. TrEMBL
Match: tr|A0A0A0KM43|A0A0A0KM43_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525290 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 4.0e-20
Identity = 84/238 (35.29%), Postives = 111/238 (46.64%), Query Frame = 0

Query: 11  NWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXXX 70
           NWLELP+EV+ +ILQK+GA+EI    Q VCS   K+C DP +                  
Sbjct: 5   NWLELPSEVMSMILQKVGAIEIFQNVQYVCSSWRKLCMDPLMWRTIDMRISGNFPRRNYY 64

Query: 71  XXXXXWKNVCKRAVD--RG------CDRFEITDSLFYT----------------CFLQFG 130
                 +  C+  VD  RG       + F     L Y                 C    G
Sbjct: 65  L-----RAACRYGVDLSRGHLIDISIESFATDSLLLYIARRSNELKRLWIADCFCISDMG 124

Query: 131 IFHCWSILK-IESLQIGL---EPKTLRTIGRCCHLLKSLKLRE-----AAIATFEVPLAI 190
           +    S L  +E L+I L   + +TL T+GRCC LLKSLKL +       +      LAI
Sbjct: 125 LIKAASKLPLLEQLEIFLCCFDSRTLGTVGRCCPLLKSLKLNQQFCTGKGMECDREALAI 184

Query: 191 AKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHL----KENVK 212
           AK MPKL HL+I G  +T+ GL A+L  C DL+SLDL   + + F+  L     EN+K
Sbjct: 185 AKTMPKLRHLQIFGNALTDKGLQAILNGCPDLESLDLRHCFNLKFEGELGNMCAENIK 237

BLAST of CsGy6G036030 vs. TrEMBL
Match: tr|A0A2N9GAL3|A0A2N9GAL3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24455 PE=4 SV=1)

HSP 1 Score: 106.7 bits (265), Expect = 6.8e-20
Identity = 84/243 (34.57%), Postives = 118/243 (48.56%), Query Frame = 0

Query: 10  RNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXX 69
           RNWLELP +V   ILQ+LGA+EILT+AQ+VC L Y +CKDP +                 
Sbjct: 13  RNWLELPRDVTASILQRLGAIEILTSAQHVCKLWYNLCKDPSMWRTIKMYNLDYLGDL-- 72

Query: 70  XXXXXXWKNVCKRAVDRGCDRF-EITDSLFYTCFLQFGIFHCWSILK------------- 129
                  + +C+ AVDR   +  +I    F T  L   I +  S L+             
Sbjct: 73  -------EKMCRNAVDRSSGQLRDINLEYFVTDDLLNYIANSSSQLRRIRLVSCNDISDG 132

Query: 130 -----------IESLQI---GLEPKTLRTIGRCCHLLKSLKL------REAAIATFEVPL 189
                      +E L++    L  + L  +GRCC LLKSLKL      R   +   E  L
Sbjct: 133 GLSEAAAKLPLLEELELSLCSLSKEPLVAVGRCCPLLKSLKLNHRGYRRPYIVVYDEEVL 192

Query: 190 AIAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHL-KENVKGSK 218
           AIA++MP+L HL++ G  +TN GL A+L  C  L+SLDL + + +    +L +   +G K
Sbjct: 193 AIAENMPELRHLQLFGNTLTNDGLLAILDGCPHLESLDLRKCYNVTLSGNLGRRCTEGIK 246

BLAST of CsGy6G036030 vs. TrEMBL
Match: tr|A0A2P4MVA6|A0A2P4MVA6_QUESU (F-box protein skip19 OS=Quercus suber OX=58331 GN=CFP56_18505 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.9e-20
Identity = 81/241 (33.61%), Postives = 109/241 (45.23%), Query Frame = 0

Query: 10  RNWLELPAEVLLVILQKLGAVEILTTAQNVCSLLYKICKDPFLXXXXXXXXXXXXXXXXX 69
           RNWLELP +V   I Q+LGAVEIL TAQ VC+L   ICK+P +                 
Sbjct: 60  RNWLELPRDVTESIFQRLGAVEILETAQKVCTLWRNICKEPSMWRDINMLNLYEWEDGPS 119

Query: 70  XXXXXXWKNVCKRAVDRGCDR-------FEITDSLF------YTCFLQFGIFHCWSILK- 129
                    +C+ AVDR C +       +   D L        +   +  + HC+ I   
Sbjct: 120 DPL-----KMCRNAVDRSCGQLRAINIEYVANDELLNYIAQSSSQLRRLRLLHCYEITDE 179

Query: 130 -----------IESLQI---GLEPKTLRTIGRCCHLLKSLK-----LREAAIATFEVPLA 189
                      +E L I    L  +T+  +GRCC  LKS K      R   I   E  +A
Sbjct: 180 GLIEMAEKLPLLEELDITISSLSEETIEAVGRCCPHLKSFKWNHEGYRFPDIQCDEEAVA 239

Query: 190 IAKHMPKLHHLEIVGICITNLGLHALLVRCSDLQSLDLSESWLMDFDEHLKENVKGSKLL 218
           IAK+MPKL HL+++G  +TN GL A+L  C  L+SLDL + + +     L       K L
Sbjct: 240 IAKNMPKLRHLQLIGNRLTNDGLQAILDNCPHLESLDLRKCFNVTLSGDLGRRCARIKNL 295

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_011658525.15.8e-4749.18PREDICTED: putative F-box/LRR-repeat protein 23 [Cucumis sativus] >KGN49440.1 hy... [more]
KGN49441.15.1e-27100.00hypothetical protein Csa_6G525280 [Cucumis sativus][more]
XP_022146630.14.0e-2438.50F-box protein SKIP19-like [Momordica charantia][more]
XP_022146724.12.5e-2134.40putative F-box/LRR-repeat protein 23 [Momordica charantia][more]
XP_023543623.13.2e-2135.12F-box protein SKIP19-like [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
AT4G05460.11.2e-1731.60RNI-like superfamily protein[more]
AT4G05497.16.7e-1329.68RNI-like superfamily protein[more]
AT4G05490.13.3e-1227.24RNI-like superfamily protein[more]
AT4G05470.12.8e-1125.82RNI-like superfamily protein[more]
AT4G05475.12.0e-0925.30RNI-like superfamily protein[more]
Match NameE-valueIdentityDescription
sp|Q9S9V9|FBL23_ARATH1.9e-1730.25Putative F-box/LRR-repeat protein 23 OS=Arabidopsis thaliana OX=3702 GN=FBL23 PE... [more]
sp|Q9M0U9|SKI19_ARATH2.1e-1631.60F-box protein SKIP19 OS=Arabidopsis thaliana OX=3702 GN=SKIP19 PE=1 SV=1[more]
sp|Q9S9V8|FBL9_ARATH1.2e-1129.68Putative F-box/LRR-repeat protein 9 OS=Arabidopsis thaliana OX=3702 GN=FBL9 PE=4... [more]
sp|Q9M0U6|FBL22_ARATH6.0e-1127.24Putative F-box/LRR-repeat protein 22 OS=Arabidopsis thaliana OX=3702 GN=FBL22 PE... [more]
sp|Q9M0U8|FBL21_ARATH5.1e-1025.82Putative F-box/LRR-repeat protein 21 OS=Arabidopsis thaliana OX=3702 GN=FBL21 PE... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0KI84|A0A0A0KI84_CUCSA3.8e-4749.18Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525270 PE=4 SV=1[more]
tr|A0A0A0KP25|A0A0A0KP25_CUCSA3.4e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525280 PE=4 SV=1[more]
tr|A0A0A0KM43|A0A0A0KM43_CUCSA4.0e-2035.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525290 PE=4 SV=1[more]
tr|A0A2N9GAL3|A0A2N9GAL3_FAGSY6.8e-2034.57Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS24455 PE=4 SV=1[more]
tr|A0A2P4MVA6|A0A2P4MVA6_QUESU8.9e-2033.61F-box protein skip19 OS=Quercus suber OX=58331 GN=CFP56_18505 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR032675LRR_dom_sf
IPR001810F-box_dom
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
molecular_function GO:0005515 protein binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G036030.1CsGy6G036030.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 12..58
e-value: 5.5E-7
score: 29.3
IPR001810F-box domainPROSITEPS50181FBOXcoord: 9..56
score: 10.133
IPR032675Leucine-rich repeat domain superfamilyGENE3DG3DSA:3.80.10.10coord: 80..215
e-value: 1.5E-12
score: 48.5
NoneNo IPR availableGENE3DG3DSA:1.20.1280.50coord: 4..57
e-value: 1.3E-8
score: 36.6
NoneNo IPR availablePANTHERPTHR44078:SF5F-BOX PROTEIN SKIP19-RELATEDcoord: 5..87
NoneNo IPR availablePANTHERPTHR44078FAMILY NOT NAMEDcoord: 5..87
NoneNo IPR availablePANTHERPTHR44078:SF5F-BOX PROTEIN SKIP19-RELATEDcoord: 122..208
NoneNo IPR availablePANTHERPTHR44078FAMILY NOT NAMEDcoord: 122..208
NoneNo IPR availableSUPERFAMILYSSF52047RNI-likecoord: 122..202
IPR036047F-box-like domain superfamilySUPERFAMILYSSF81383F-box domaincoord: 7..80

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None