CsGy6G035980 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AAAGAGAAAAAGGGTATTGTGTAGCGACGTTCTCAGCGTTTTCCCCCCTAAAAGGAGCTTTGTAGTTGCAGTCGAGGCTTGTGCGCTTCAAACAAATTGAATTGGGAGATGGAAATTTGAATTGAGTCCCCTTTGAAGAAGAATCCCACCACTTAATCCGCTTCTGAAATTTCTTACAATCAAACCCAGTTGATTATTTTCAATTCTCAAGAACAAAGATCGCTGTGGGCTTCGATTTTGATTTTGTAAGGAAAAACCCACTTGAAAATGTCTTCATCTTCTCCGTTTTTCGGACCCCCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTTATTTGGCAATTTATTCCTTCAACAGTCGTGTTTTTCCTCTTCAAAATCTTCGTTTCAGCCATTTCTTCTGTTTCTGTTACCAATTCCTCAGCTGGAACTAGGGACCCATCTGCCCCTTTTGCTTCATTGCTCACTGGGTTCCTTACCTTTCTTACATTTCATCTTTCTCAGCTCCTTTTTTCTTCTTCCCTTTCTCTTCTTGCTTCTCCCCAGCTCGAGAGACCTGCCGCGCCGCTTGAGCTCGTGTTTGGGCTCGTCCGGTTTCTTGTAGTTTCAGGTGGTGATAATGCTTCATCAGCGTCGGCTTTGAAGGATTTTCGCCGTCGAGCTATGGTTTCGTTCTATTTGGTTTTGTTTGTTGTGGCAACTGCGGTTTCAGGTTCCTTGGCGGCGGTTTCCATATGTTGGGGGAAATCAGATGGTCTTAGAAGTGCGTGGCATATGGGTCTCTTGATGGGTTTGATTTATGGCTGTTTCTATGTTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGGTTAGTTTTCGATCCTCCGTTTGTAATTTGATTGTTTATTTTCTGCCTGGTTGCTAGACTAGTGGAAACTTAGGAGGTTATAATGACTATGGAGAAATAGCTAGTTCTGTGAATTTTTCAGAATTGGAGTGGTTCTGGGGGTTTTATTTGAATTGGAAACTGGTGTTCTGATACGCTTACATCTAATGATATATAAGGGTTTGAATGCAAAGAGAAGACACTGAATTAGTCTATGCCTTATTTCCAAAATTTACAGATGGGCCTTAGTTCCAATTGGGGCTCATTGTTGAATATCATGGCAATGCTGCAATACATAAATTTTGATTGTTTGACTGTATTTATTGATTTCAACTTAGAAGATGTAGTTTGATACTTTCTTATTGAAAACAGATTATACTTGTAAGATGTTCTGTGCAGAAGGAAAATGTCTTTGGATCTTAGTAGTTTTGACAGCAGCTTTGAGAACTATGTCGAATAAGAAGTAATTCTTAGGATGCATAAGAAAATGACTTTGAAGATTTCGAGTACTATAATATGCCTTGCTGCGTCTTTGGATATCATTTATGGTTAAATTTGGGAGGATGCTTTCAAGATGACAACGTGTTACATAATGTTTGTTATTTGTAAAAGGCATTCTTCAATTTTAACCCTTTTCTAGATTTTTAATATTATTCTACAATTAGTGATTTTGTCATTGGTTAAGTTTCTGCTTTAGTTAGAGATTGATGAGACATCCTTTGTCGAATGTCTAAACACAATTTTTACCTATTGGTTCATTTTGGAGACTTTTCAATACAATCATTAACTCACCGTTATAATGTGGAAGCCAGTTATTTTTAATATTGAATTTATTACTTTTTTTTAATTAGTTAATTAATTAAAATTTCTTTTCTTTTTATGTGCCTTATTTCAGGAGAATTTTAAGCTACCGTATTTACTTCACATATCTTTGATATTTGTGTTCTTGCATGTTTCATGGTCAAGATTTGAAGTTTCTGGTTTACTGATTGCAAATACTTTTATCAACAGCGTCCCCCCTTTTTCAGCTTCAAGATGGGTTTTCCATCAGCTACAACGTTGGCTTCCAAACTTTCTGCTGCAACCTTCCTATTTTCAGCAGTATTAATGGTGCTTCTGCCTGATCAACATAAGAAAAGTGTTTCGGTCAGAAAATTCATTGGTAACCAGACCATTCTATTCATTGGAAGTTTTGCAGTTTTTCTTTCTTGGGAATTGACTCACCACTTACATCGGGTTAGTATAATGATGTACTTTCTCTTTTCTCATCAACGTCGTTAAGTTAAGTGTGCCATGTTGTAGTCTCCTTTAGGCTTTTGAAGTGGGATTGATGCCCCTTTATGTAACGTCAATGGCAATTCAAACAGTGACTTCAAATAAACTAACTTAAACAACCCTCGCCCCGCCCCGCCCCGCCCCACCCTGGAGACAATCTGCTAGACTTAATTTTAAGGAAATTATTACTAAACATAATACTGGTTTGGACATGAATTTTTAGAGCTTTAACAGCTTATATGGTTAGGTTACGGAAGCACTATTCTAAAAGACCATGTACTTGAAACTTACCATGTAGAAAAGGAAGCATTGCGCATAAATTTAGAAAACACTTTTCAAAGTCAGGAGCATAGTTGAAGCTTTTTTCAAAGGTGCTTTGTGTAACTTAACTTAAATTTAAATATCCACTCCATCATATTAAGGAAAAAAACTGGAGATTTTATGCTTTAGATGGATTGGGTTCTTATAAAAAGTTGTCACAAAGGGATAGACTCTCTACTACAGTTTGAGACACTGTCTTAAAGCAACAATTTATTTGTAAGTAGTTTTCAAATAACACTGATGCCCTCCATGAATTTAATCAGTTTGTAACACAATTTTTTGTCAGGCCTGCAATTTGATTATTTTCTGTGTCTGATAGTGATTTTGTAATTTTAGGTCCTACACACCAAGAGGTTTGCTTTTGCACCTCCAAAGGGTTCTGCAGCTGCGGAAACAAATCCTAGTGAGCACCTCTTTGCAGCTTTGGAGGACAGCAACTCTGGATCACTTTTGCAATATCTTGCATTTCTTGATCTCTGCATGGTTTGTGAGACTAATGTTGATATATGGAGGAGAGCTGCATTTTTCGAAGAAACAGGGGACACATACAAGCGAGTTATATCCATATCCTTGAGGCCTCTGGAGCAATTTGCCCTGAACTTGGGTCAAGGTTTGGAAGGTGCTATGGACATGACCTCCCAACTATCCAGACAGTTATTACCGCCAAATGACTCTCACTTCGATGTAAAACAATTGAAAGCTCTTAAAAACTTTCAGGTTGGGGATAAATTTTAGTTGGAGTACAACTATCCTGTCCATTGCTTGTTTTATTTATTTGTTTGTTCTTTGGTGGGGGAGTGTCCTATTTTGAATCTCTTTGGGAGTTTTGCAGTGGTGTTACTTTTATCAATCCTAGACGGAATCAATGCCTATACTAGATTTAAAAATATTTTGAAGGAAAGAATGTATAGGGTATAACCATGCAACAACCTTCATCGTCATGGCAAATCCTTCATCCATCACATGTCTGCATTGTAATTATAGTACACATTTTTTGCAGTTTTGTCCATGACTTCACAAGGACATTTTTGGATTTTAATGCATGTTATTTAAGCTATGCTTATGAATACCAAGTTTAACAGTTTAAGTTTTAGTTATAGACTATTCCTGAACCAATGAAAGTTCAATCGCCTCATACCTATTTTCTTCCTTGTGAAGACAGCTTGGAAAGCTAGGGGAAGCATTTTAAGATAGACAAACTCATTTACATGCATTCATTCACTTTCAAATTCCCGTGCTTGCCCAATGTAGAGAAGATAGCATGGCCATTAAATTTATGTTCTTTATCCCTTTATTTTATTACATATTGTTTAACTTTGTAAATGAAACGAGTTTACTGTGAACATCTTTGCGGTTATTGGATATAATGATAATGGTTGCTACTTTGCAGTTGTACGCATGGTGTGCCCGTACGGTTTCTACATTGACTGCACGCTCACATGTGGAAGATCGATTCGGAGTTGCCCAGCTCTCTGGGAGTAATGCTACTGTTATGTCAACACTATTGTCTTGCCTGCTTGCTGTTGAAGTGCTGATGGGGAAGAAGACTAATCTACAATCTTCACACAATCTATTCGGTCCAGCTGGTATTAAATGGGCAACATCGAGTATTAGAAGAGTAGATGCTTCAGTTGGTAAAAAGAAAAACGGGCCGCTGCACTCGAAGGCATATGCAATTGCAGACGTATTGAGGGTCTCGATTTACCTCATTGTTACCGCATTCCATAATGAGATGGTGAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACGGATGAAAAACCCCCTTTTGGTACTCGCGAGTTGCTTCTGCAGAAATTGCATATTTTCTTGGATTTTCAAGCTTAGATATAACCGGGTTTCGACCCGTTTAGTGAATTATACCTAGCCACCTGTTAGGCAGTTTTGTCCTTTCTAAAGAGTTATGAATATGAAGATGATGTTAAGACTGATGGAAATTCACAAACTAAGTTTGCAAGTTTGTAATACGCTTTACATCTCTTGTCTCCGCTTCTTCACTCCAAAATTGAGAAATTATCGCGGCCTCATCATTTTGACTCTTGGTAGAAACACAATCCTCGATATTGCTTTTATATTTTTGGGTTTTAATCAAACAGCTTATAAGCCTTTTCTTTAAGTCTCTACTTATTAATACGATCATTTACTGCGGTTTCAT AAAGAGAAAAAGGGTATTGTGTAGCGACGTTCTCAGCGTTTTCCCCCCTAAAAGGAGCTTTGTAGTTGCAGTCGAGGCTTGTGCGCTTCAAACAAATTGAATTGGGAGATGGAAATTTGAATTGAGTCCCCTTTGAAGAAGAATCCCACCACTTAATCCGCTTCTGAAATTTCTTACAATCAAACCCAGTTGATTATTTTCAATTCTCAAGAACAAAGATCGCTGTGGGCTTCGATTTTGATTTTGTAAGGAAAAACCCACTTGAAAATGTCTTCATCTTCTCCGTTTTTCGGACCCCCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTTATTTGGCAATTTATTCCTTCAACAGTCGTGTTTTTCCTCTTCAAAATCTTCGTTTCAGCCATTTCTTCTGTTTCTGTTACCAATTCCTCAGCTGGAACTAGGGACCCATCTGCCCCTTTTGCTTCATTGCTCACTGGGTTCCTTACCTTTCTTACATTTCATCTTTCTCAGCTCCTTTTTTCTTCTTCCCTTTCTCTTCTTGCTTCTCCCCAGCTCGAGAGACCTGCCGCGCCGCTTGAGCTCGTGTTTGGGCTCGTCCGGTTTCTTGTAGTTTCAGGTGGTGATAATGCTTCATCAGCGTCGGCTTTGAAGGATTTTCGCCGTCGAGCTATGGTTTCGTTCTATTTGGTTTTGTTTGTTGTGGCAACTGCGGTTTCAGGTTCCTTGGCGGCGGTTTCCATATGTTGGGGGAAATCAGATGGTCTTAGAAGTGCGTGGCATATGGGTCTCTTGATGGGTTTGATTTATGGCTGTTTCTATGTTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGCGTCCCCCCTTTTTCAGCTTCAAGATGGGTTTTCCATCAGCTACAACGTTGGCTTCCAAACTTTCTGCTGCAACCTTCCTATTTTCAGCAGTATTAATGGTGCTTCTGCCTGATCAACATAAGAAAAGTGTTTCGGTCAGAAAATTCATTGGTAACCAGACCATTCTATTCATTGGAAGTTTTGCAGTTTTTCTTTCTTGGGAATTGACTCACCACTTACATCGGGTCCTACACACCAAGAGGTTTGCTTTTGCACCTCCAAAGGGTTCTGCAGCTGCGGAAACAAATCCTAGTGAGCACCTCTTTGCAGCTTTGGAGGACAGCAACTCTGGATCACTTTTGCAATATCTTGCATTTCTTGATCTCTGCATGGTTTGTGAGACTAATGTTGATATATGGAGGAGAGCTGCATTTTTCGAAGAAACAGGGGACACATACAAGCGAGTTATATCCATATCCTTGAGGCCTCTGGAGCAATTTGCCCTGAACTTGGGTCAAGGTTTGGAAGGTGCTATGGACATGACCTCCCAACTATCCAGACAGTTATTACCGCCAAATGACTCTCACTTCGATGTAAAACAATTGAAAGCTCTTAAAAACTTTCAGTTGTACGCATGGTGTGCCCGTACGGTTTCTACATTGACTGCACGCTCACATGTGGAAGATCGATTCGGAGTTGCCCAGCTCTCTGGGAGTAATGCTACTGTTATGTCAACACTATTGTCTTGCCTGCTTGCTGTTGAAGTGCTGATGGGGAAGAAGACTAATCTACAATCTTCACACAATCTATTCGGTCCAGCTGGTATTAAATGGGCAACATCGAGTATTAGAAGAGTAGATGCTTCAGTTGGTAAAAAGAAAAACGGGCCGCTGCACTCGAAGGCATATGCAATTGCAGACGTATTGAGGGTCTCGATTTACCTCATTGTTACCGCATTCCATAATGAGATGGTGAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACGGATGAAAAACCCCCTTTTGGTACTCGCGAGTTGCTTCTGCAGAAATTGCATATTTTCTTGGATTTTCAAGCTTAGATATAACCGGGTTTCGACCCGTTTAGTGAATTATACCTAGCCACCTGTTAGGCAGTTTTGTCCTTTCTAAAGAGTTATGAATATGAAGATGATGTTAAGACTGATGGAAATTCACAAACTAAGTTTGCAAGTTTGTAATACGCTTTACATCTCTTGTCTCCGCTTCTTCACTCCAAAATTGAGAAATTATCGCGGCCTCATCATTTTGACTCTTGGTAGAAACACAATCCTCGATATTGCTTTTATATTTTTGGGTTTTAATCAAACAGCTTATAAGCCTTTTCTTTAAGTCTCTACTTATTAATACGATCATTTACTGCGGTTTCAT ATGTCTTCATCTTCTCCGTTTTTCGGACCCCCAGAAATGGTTGTCAAGAATCGCTTTCTGGGTTTCCTTATTTGGCAATTTATTCCTTCAACAGTCGTGTTTTTCCTCTTCAAAATCTTCGTTTCAGCCATTTCTTCTGTTTCTGTTACCAATTCCTCAGCTGGAACTAGGGACCCATCTGCCCCTTTTGCTTCATTGCTCACTGGGTTCCTTACCTTTCTTACATTTCATCTTTCTCAGCTCCTTTTTTCTTCTTCCCTTTCTCTTCTTGCTTCTCCCCAGCTCGAGAGACCTGCCGCGCCGCTTGAGCTCGTGTTTGGGCTCGTCCGGTTTCTTGTAGTTTCAGGTGGTGATAATGCTTCATCAGCGTCGGCTTTGAAGGATTTTCGCCGTCGAGCTATGGTTTCGTTCTATTTGGTTTTGTTTGTTGTGGCAACTGCGGTTTCAGGTTCCTTGGCGGCGGTTTCCATATGTTGGGGGAAATCAGATGGTCTTAGAAGTGCGTGGCATATGGGTCTCTTGATGGGTTTGATTTATGGCTGTTTCTATGTTTACAAGAAAAGATGGGTTCTAATGTTCCCAATCATACAGCGTCCCCCCTTTTTCAGCTTCAAGATGGGTTTTCCATCAGCTACAACGTTGGCTTCCAAACTTTCTGCTGCAACCTTCCTATTTTCAGCAGTATTAATGGTGCTTCTGCCTGATCAACATAAGAAAAGTGTTTCGGTCAGAAAATTCATTGGTAACCAGACCATTCTATTCATTGGAAGTTTTGCAGTTTTTCTTTCTTGGGAATTGACTCACCACTTACATCGGGTCCTACACACCAAGAGGTTTGCTTTTGCACCTCCAAAGGGTTCTGCAGCTGCGGAAACAAATCCTAGTGAGCACCTCTTTGCAGCTTTGGAGGACAGCAACTCTGGATCACTTTTGCAATATCTTGCATTTCTTGATCTCTGCATGGTTTGTGAGACTAATGTTGATATATGGAGGAGAGCTGCATTTTTCGAAGAAACAGGGGACACATACAAGCGAGTTATATCCATATCCTTGAGGCCTCTGGAGCAATTTGCCCTGAACTTGGGTCAAGGTTTGGAAGGTGCTATGGACATGACCTCCCAACTATCCAGACAGTTATTACCGCCAAATGACTCTCACTTCGATGTAAAACAATTGAAAGCTCTTAAAAACTTTCAGTTGTACGCATGGTGTGCCCGTACGGTTTCTACATTGACTGCACGCTCACATGTGGAAGATCGATTCGGAGTTGCCCAGCTCTCTGGGAGTAATGCTACTGTTATGTCAACACTATTGTCTTGCCTGCTTGCTGTTGAAGTGCTGATGGGGAAGAAGACTAATCTACAATCTTCACACAATCTATTCGGTCCAGCTGGTATTAAATGGGCAACATCGAGTATTAGAAGAGTAGATGCTTCAGTTGGTAAAAAGAAAAACGGGCCGCTGCACTCGAAGGCATATGCAATTGCAGACGTATTGAGGGTCTCGATTTACCTCATTGTTACCGCATTCCATAATGAGATGGTGAACAGTGCCAAGTCTGGTGTTCTTGAGAAAGATTGGATCACGGATGAAAAACCCCCTTTTGGTACTCGCGAGTTGCTTCTGCAGAAATTGCATATTTTCTTGGATTTTCAAGCTTAG MSSSSPFFGPPEMVVKNRFLGFLIWQFIPSTVVFFLFKIFVSAISSVSVTNSSAGTRDPSAPFASLLTGFLTFLTFHLSQLLFSSSLSLLASPQLERPAAPLELVFGLVRFLVVSGGDNASSASALKDFRRRAMVSFYLVLFVVATAVSGSLAAVSICWGKSDGLRSAWHMGLLMGLIYGCFYVYKKRWVLMFPIIQRPPFFSFKMGFPSATTLASKLSAATFLFSAVLMVLLPDQHKKSVSVRKFIGNQTILFIGSFAVFLSWELTHHLHRVLHTKRFAFAPPKGSAAAETNPSEHLFAALEDSNSGSLLQYLAFLDLCMVCETNVDIWRRAAFFEETGDTYKRVISISLRPLEQFALNLGQGLEGAMDMTSQLSRQLLPPNDSHFDVKQLKALKNFQLYAWCARTVSTLTARSHVEDRFGVAQLSGSNATVMSTLLSCLLAVEVLMGKKTNLQSSHNLFGPAGIKWATSSIRRVDASVGKKKNGPLHSKAYAIADVLRVSIYLIVTAFHNEMVNSAKSGVLEKDWITDEKPPFGTRELLLQKLHIFLDFQA
BLAST of CsGy6G035980 vs. NCBI nr
Match: XP_004134593.1 (PREDICTED: uncharacterized protein LOC101219057 [Cucumis sativus] >KGN49437.1 hypothetical protein Csa_6G525230 [Cucumis sativus]) HSP 1 Score: 1073.9 bits (2776), Expect = 1.7e-310 Identity = 551/553 (99.64%), Postives = 553/553 (100.00%), Query Frame = 0
BLAST of CsGy6G035980 vs. NCBI nr
Match: XP_008439582.1 (PREDICTED: uncharacterized protein LOC103484335 [Cucumis melo]) HSP 1 Score: 951.4 bits (2458), Expect = 1.3e-273 Identity = 494/553 (89.33%), Postives = 504/553 (91.14%), Query Frame = 0
BLAST of CsGy6G035980 vs. NCBI nr
Match: XP_022925889.1 (uncharacterized protein LOC111433165 [Cucurbita moschata]) HSP 1 Score: 885.2 bits (2286), Expect = 1.2e-253 Identity = 461/553 (83.36%), Postives = 489/553 (88.43%), Query Frame = 0
BLAST of CsGy6G035980 vs. NCBI nr
Match: XP_022977407.1 (uncharacterized protein LOC111477752 [Cucurbita maxima]) HSP 1 Score: 883.6 bits (2282), Expect = 3.4e-253 Identity = 458/553 (82.82%), Postives = 486/553 (87.88%), Query Frame = 0
BLAST of CsGy6G035980 vs. NCBI nr
Match: XP_023543625.1 (uncharacterized protein LOC111803454 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 882.5 bits (2279), Expect = 7.5e-253 Identity = 457/553 (82.64%), Postives = 485/553 (87.70%), Query Frame = 0
BLAST of CsGy6G035980 vs. TAIR10
Match: AT1G73240.1 (Nucleoporin protein Ndc1-Nup (InterPro:IPR019049)) HSP 1 Score: 515.0 bits (1325), Expect = 5.7e-146 Identity = 283/545 (51.93%), Postives = 363/545 (66.61%), Query Frame = 0
BLAST of CsGy6G035980 vs. TrEMBL
Match: tr|A0A0A0KM37|A0A0A0KM37_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G525230 PE=4 SV=1) HSP 1 Score: 1073.9 bits (2776), Expect = 1.1e-310 Identity = 551/553 (99.64%), Postives = 553/553 (100.00%), Query Frame = 0
BLAST of CsGy6G035980 vs. TrEMBL
Match: tr|A0A1S3AZ36|A0A1S3AZ36_CUCME (uncharacterized protein LOC103484335 OS=Cucumis melo OX=3656 GN=LOC103484335 PE=4 SV=1) HSP 1 Score: 951.4 bits (2458), Expect = 8.7e-274 Identity = 494/553 (89.33%), Postives = 504/553 (91.14%), Query Frame = 0
BLAST of CsGy6G035980 vs. TrEMBL
Match: tr|A0A2P5E9T4|A0A2P5E9T4_9ROSA (Nucleoporin protein Ndc1-Nup OS=Trema orientalis OX=63057 GN=TorRG33x02_218220 PE=4 SV=1) HSP 1 Score: 654.1 bits (1686), Expect = 2.9e-184 Identity = 348/562 (61.92%), Postives = 414/562 (73.67%), Query Frame = 0
BLAST of CsGy6G035980 vs. TrEMBL
Match: tr|A0A2I4GUW1|A0A2I4GUW1_9ROSI (uncharacterized protein LOC109011083 OS=Juglans regia OX=51240 GN=LOC109011083 PE=4 SV=1) HSP 1 Score: 651.4 bits (1679), Expect = 1.9e-183 Identity = 350/548 (63.87%), Postives = 401/548 (73.18%), Query Frame = 0
BLAST of CsGy6G035980 vs. TrEMBL
Match: tr|A0A2N9FUC4|A0A2N9FUC4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18774 PE=4 SV=1) HSP 1 Score: 638.3 bits (1645), Expect = 1.6e-179 Identity = 330/502 (65.74%), Postives = 385/502 (76.69%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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