CsGy6G033080 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G033080
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 29970336 .. 29970518 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAATTGAGGCGTCACCACAGGGCAAAGGCACGGGCGCCCAGTGTCTGCCAGTGGTCACCATTCTGCATGCAACCCTCCCCACAGTTGCTTTGTCCCCACCCCTACCAAATCCCTCAATTCAACCCATGCCTCTTGGGCCTGGCCCTTTTCTTTCCCCCCCCCCTTTAGGCCCAAATTGA

mRNA sequence

ATGGCAATTGAGGCGTCACCACAGGGCAAAGGCACGGGCGCCCAGTGTCTGCCAGTGGTCACCATTCTGCATGCAACCCTCCCCACAGTTGCTTTGTCCCCACCCCTACCAAATCCCTCAATTCAACCCATGCCTCTTGGGCCTGGCCCTTTTCTTTCCCCCCCCCCTTTAGGCCCAAATTGA

Coding sequence (CDS)

ATGGCAATTGAGGCGTCACCACAGGGCAAAGGCACGGGCGCCCAGTGTCTGCCAGTGGTCACCATTCTGCATGCAACCCTCCCCACAGTTGCTTTGTCCCCACCCCTACCAAATCCCTCAATTCAACCCATGCCTCTTGGGCCTGGCCCTTTTCTTTCCCCCCCCCCTTTAGGCCCAAATTGA

Protein sequence

MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPNPSIQPMPLGPGPFLSPPPLGPN
Homology
[Close]
BLAST of CsGy6G033080 vs. NCBI nr
Match: KGN49106.1 (hypothetical protein Csa_6G513700 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 6.3e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1  MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPN 39
          MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPN
Sbjct: 1  MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPN 38

[Close]
BLAST of CsGy6G033080 vs. TrEMBL
Match: tr|A0A0A0KN09|A0A0A0KN09_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513700 PE=4 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 4.2e-12
Identity = 38/38 (100.00%), Postives = 38/38 (100.00%), Query Frame = 0 

Query: 1  MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPN 39
          MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPN
Sbjct: 1  MAIEASPQGKGTGAQCLPVVTILHATLPTVALSPPLPN 38

The following BLAST results are available for this feature:
BLAST of CsGy6G033080 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN49106.16.3e-12100.00hypothetical protein Csa_6G513700 [Cucumis sativus][more]
BLAST of CsGy6G033080 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G033080 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G033080 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KN09|A0A0A0KN09_CUCSA4.2e-12100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513700 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G033080.1CsGy6G033080.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 32..60

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G033080Csa6G513700Cucumber (Chinese Long) v2cgybcuB281
CsGy6G033080CSPI06G33510Wild cucumber (PI 183967)cgybcpiB287
CsGy6G033080CsaV3_6G048990Cucumber (Chinese Long) v3cgybcucB298
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G033080Cucumber (Gy14) v2cgybcgybB035
CsGy6G033080Cucumber (Gy14) v2cgybcgybB063
CsGy6G033080Cucumber (Gy14) v2cgybcgybB153
CsGy6G033080Cucurbita maxima (Rimu)cgybcmaB726
CsGy6G033080Cucurbita maxima (Rimu)cgybcmaB772
CsGy6G033080Cucurbita maxima (Rimu)cgybcmaB831
CsGy6G033080Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G033080Cucurbita moschata (Rifu)cgybcmoB709
CsGy6G033080Cucurbita moschata (Rifu)cgybcmoB750
CsGy6G033080Cucurbita moschata (Rifu)cgybcmoB811
CsGy6G033080Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G033080Cucurbita pepo (Zucchini)cgybcpeB707
CsGy6G033080Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G033080Cucurbita pepo (Zucchini)cgybcpeB765
CsGy6G033080Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G033080Cucurbita pepo (Zucchini)cgybcpeB814
CsGy6G033080Cucumber (Chinese Long) v2cgybcuB239
CsGy6G033080Cucumber (Chinese Long) v2cgybcuB248
CsGy6G033080Cucumber (Chinese Long) v2cgybcuB289
CsGy6G033080Bottle gourd (USVL1VR-Ls)cgyblsiB376
CsGy6G033080Bottle gourd (USVL1VR-Ls)cgyblsiB391
CsGy6G033080Bottle gourd (USVL1VR-Ls)cgyblsiB398
CsGy6G033080Bottle gourd (USVL1VR-Ls)cgyblsiB402
CsGy6G033080Melon (DHL92) v3.5.1cgybmeB395
CsGy6G033080Melon (DHL92) v3.5.1cgybmeB397
CsGy6G033080Melon (DHL92) v3.5.1cgybmeB404
CsGy6G033080Melon (DHL92) v3.5.1cgybmeB445
CsGy6G033080Melon (DHL92) v3.6.1cgybmedB397
CsGy6G033080Melon (DHL92) v3.6.1cgybmedB403
CsGy6G033080Melon (DHL92) v3.6.1cgybmedB442
CsGy6G033080Watermelon (Charleston Gray)cgybwcgB399
CsGy6G033080Watermelon (Charleston Gray)cgybwcgB421
CsGy6G033080Watermelon (97103) v1cgybwmB448
CsGy6G033080Watermelon (97103) v1cgybwmB468
CsGy6G033080Wild cucumber (PI 183967)cgybcpiB247
CsGy6G033080Wild cucumber (PI 183967)cgybcpiB256
CsGy6G033080Wild cucumber (PI 183967)cgybcpiB295
CsGy6G033080Silver-seed gourdcarcgybB0502
CsGy6G033080Silver-seed gourdcarcgybB0640
CsGy6G033080Silver-seed gourdcarcgybB0863
CsGy6G033080Silver-seed gourdcarcgybB0922
CsGy6G033080Silver-seed gourdcarcgybB0993
CsGy6G033080Cucumber (Chinese Long) v3cgybcucB247
CsGy6G033080Cucumber (Chinese Long) v3cgybcucB261
CsGy6G033080Cucumber (Chinese Long) v3cgybcucB305
CsGy6G033080Watermelon (97103) v2cgybwmbB394
CsGy6G033080Watermelon (97103) v2cgybwmbB426
CsGy6G033080Wax gourdcgybwgoB577
CsGy6G033080Wax gourdcgybwgoB598
CsGy6G033080Wax gourdcgybwgoB604