CsGy6G031020 (gene) Cucumber (Gy14) v2

NameCsGy6G031020
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr6 : 28940641 .. 28943330 (-)
   



The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTGGTACACTGGAGTTGCGGACCAAACAAAAAAACCCCCTGGTCTCAGCACTCGATTCAATTCTAAAAGAAGCATTCCACCTGTATCATCCGGAAAAAAGTGGTACTGTTTACCATTTTAAAATTGTAATTAAAAATTATAAAGACTAAGAAATCCATGATTGATTATATAACCTTCTACATGCCAAGGCACTCTACATCGAGCACAGTGAATAGTATCAAAAACCATGCTTGGAAATGGCAGACGTTGTGAGCCCATAACAGCAGAAATGGCTGGAATTCCCCTCTCCAGGGCAAATTGGACTTGAGCTTCATGTTCGTCTTTTGGAGCAAACGACATTGTAAGCACATCTTTTTCAAACAGAAAGCCGCCGAAGCTGGCGACTCCACAGCCTACGTCCAATATCACTCTTGTTCTCTTTCCCCATGCAATATCCGGTACCGACTGCATTGAATTGATATATTAGTTTATATTGGATTCTAATATTGAAATCAAGTTGGGAATTTGATTTTCAGGTTATTTTGTTTTACTTGTTGAAGAAATTCTATGTAGTGCAAAGCGCCGTGGATGAACTGGGTGCCACCGCCGGGGAAAGTCAAGAACTCACCGGTGACCTTGACCCAATTTTGGTGGCCTTTCACTTCAGCAAGTTTTGTATGTGGTACATTGTGGTACCAAATCTATGTCGATCCACAAACAAAGACAAGTAATGATATGATCAAGTTCAGAAGGATTCGTGATGGACTAATCACAAGTCACAGAATCATCTGTCTATACATTACCTTGTCTCTACTTCTAGGCCATTCAATGGATCTTTTGTAACCTTCCGGGAGAGAGACCAAGCAGGTAGGTCCCTCCTCCGGGCAGTGTCTCTCCCTGTGCTCGAAGTGTTTTGTCGTACGTAGCTGCTTAATTGCTTTCTCGTTATCCAAACAAGGAATGTAATCAGGTCCCGCTGTGACATTGCACATCTGCCATGTGTACCCATAGATGCTGCCATCACTGCTTGATTCTTCTCGTCGACGATCTTTCTCGTTCTCTGACTGCGCTGCCTGCGTTGACCATGACTTTTTGGACTCCTTTGACTCCTTGGGTATCCCCGAGGTCTCGAGTGACCCTGCTGTAGTTGTCTCTTCCACTTTGATTTCCGTTTTCGAGTCCTTTGGGACTTCTTGGCTCTCTTTGGATTCTGTTTGTTGGGATTCTTGATCCTCAGTTGACTTATTTTTGCCTCGGTGTCTCTTTCGTGGTTGATTTTGCTCCAATGAGGGAGTTTCTTCATTGTTGTTATTCGTGTTTGAGCTGTCCTGTTCTTGTTGCTGTTGTGTCTGTTGTTGGGCCTTATCATCATCCTGGTTATGAATTTCAGGTTCTTGTGTAATTTTTTCGCCTTCAGTCCCAAGTTTCGGTTGATCGTTTTGGGAGTCTCCACTTATTTCCGGGATATCGGTTGCTTGTTGTTGCTCTATGTTTGCGATTGTTGCTTGAATATCTTGTGGATTAGCGTTGTTTTCAGGTTCTTCCGGTTGTTGTTGCTGCTGCTGCTGTTGTTCTTGCCCATTGATTTCCAACGATGTATCATTGGGTGTATCATTGGATTTACTATTGTCAGATTCTACATGCTCTGTTGATTCATTGCTTTGATCAGGTAAATTAGTATTTTGTTCTTGGTTTCCTCCCAAATCTAATTTCTCTTCAATTTTTTGGGTTGCTTCCACTTGTTGGTTTTGAGTCATTGTACTCTCTTCCGACAATTGAGCCTCATTGTTATCTCTAGGTTCTTGCACATCATTGGCGTTATCCTTGGGACGATCCTCACGAGATTTTGCATCATTATCGCTAACAATATTAGAACTATCATCGGATTTAATCGCATCAAGAGGGAGGTCACCAGGATTATCCTCAAAGGCAGGAGTGGACTCTTTGTCCTCGGATTTGGGGAGTTGGGGTTCCTCAGAGGAAGACACAAAGTCAGTGGTGGTGGCAATGGTGGAGGTGGAGGAAGTTGAAGAGTCAGAAGAAGTGCGAGTGGTGGTTTGCGGGGGAACAGCAGAGTTGGAGGTCAGCATCCATACTCCAAGAACACATAAGGCTAAGAAGACGACAGTTGTAACGGTTGAAGCATAGGAAGAAGAGGAGGATGATCTTTTGCTACTACGAGGCCTTCCAAGAGCCATAAGGAGAGAAGGAAAATGAAAGTGAGGAAGCTTGGAGTTTTGTTAATGGTGAGTTCAAAGGGGAAGGAATAACAACAATAATAATAATATGGGAAGAGGATAGAGAAACATGAGAAAAGGGGAATTGTGGAAGAGAGACAAAGGATTCTAAATTTGGAAGGTTTAAAGATCCAAAGGACTCGGAGACACACCCAAGTTTTTTTGAAATGAACAATCGAAATTGGCCATATAATAATTCTGCTGAATGGGACAATTAGATCCATTGTCTTTTCCTTCTCTTTCGTCTCCTACTTTCATTCCATGCAACATTCCTTCTCTTCCATTTGTCCTTGTCTTTTTTCTTTCTTTTTTTTCATTGTTAAAGTTATGGTCTCTTCCCCCACATCTAGCTAGTATCTATTTTAAGATGCTATCGAACAATGAGTTCACAATAAGAATATTACTAAAACTAAATTGAGATGTTATTATTTATACAATGAAATGCACGTATAACAAACATGTTAAATCTCTC

mRNA sequence

GTCTGGTACACTGGAGTTGCGGACCAAACAAAAAAACCCCCTGGTCTCAGCACTCGATTCAATTCTAAAAGAAGCATTCCACCTGTATCATCCGGAAAAAAAAAGCCGCCGAAGCTGGCGACTCCACAGCCTACGTCCAATATCACTCTTGTTCTCTTTCCCCATGCAATATCCGTGCAAAGCGCCGTGGATGAACTGGGTGCCACCGCCGGGGAAAGTCAAGAACTCACCGGTGACCTTGACCCAATTTTGGTGGCCTTTCACTTCAGCAAGTTTTGTATGTGGTACATTGTGGTACCAAATCTATGTCGATCCACAAACAAAGACAAGCCATTCAATGGATCTTTTGTAACCTTCCGGGAGAGAGACCAAGCAGGTTCTTGCACATCATTGGCGTTATCCTTGGGACGATCCTCACGAGATTTTGCATCATTATCGCTAACAATATTAGAACTATCATCGGATTTAATCGCATCAAGAGGGAGGTCACCAGGATTATCCTCAAAGGCAGGAGTGGACTCTTTGTCCTCGGATTTGGGGAGTTGGGGTTCCTCAGAGGAAGACACAAAGTCAGTGGTGGTGGCAATGGTGGAGGTGGAGGAAGTTGAAGAGTCAGAAGAAGTGCGAGTGGTGGTTTGCGGGGGAACAGCAGAGTTGGAGGTCAGCATCCATACTCCAAGAACACATAAGGCTAAGAAGACGACAGTTGTAACGGTTGAAGCATAGGAAGAAGAGGAGGATGATCTTTTGCTACTACGAGGCCTTCCAAGAGCCATAAGGAGAGAAGGAAAATGAAAGTGAGGAAGCTTGGAGTTTTGTTAATGGTGAGTTCAAAGGGGAAGGAATAACAACAATAATAATAATATGGGAAGAGGATAGAGAAACATGAGAAAAGGGGAATTGTGGAAGAGAGACAAAGGATTCTAAATTTGGAAGGTTTAAAGATCCAAAGGACTCGGAGACACACCCAAGTTTTTTTGAAATGAACAATCGAAATTGGCCATATAATAATTCTGCTGAATGGGACAATTAGATCCATTGTCTTTTCCTTCTCTTTCGTCTCCTACTTTCATTCCATGCAACATTCCTTCTCTTCCATTTGTCCTTGTCTTTTTTCTTTCTTTTTTTTCATTGTTAAAGTTATGGTCTCTTCCCCCACATCTAGCTAGTATCTATTTTAAGATGCTATCGAACAATGAGTTCACAATAAGAATATTACTAAAACTAAATTGAGATGTTATTATTTATACAATGAAATGCACGTATAACAAACATGTTAAATCTCTC

Coding sequence (CDS)

GTCTGGTACACTGGAGTTGCGGACCAAACAAAAAAACCCCCTGGTCTCAGCACTCGATTCAATTCTAAAAGAAGCATTCCACCTGTATCATCCGGAAAAAAAAAGCCGCCGAAGCTGGCGACTCCACAGCCTACGTCCAATATCACTCTTGTTCTCTTTCCCCATGCAATATCCGTGCAAAGCGCCGTGGATGAACTGGGTGCCACCGCCGGGGAAAGTCAAGAACTCACCGGTGACCTTGACCCAATTTTGGTGGCCTTTCACTTCAGCAAGTTTTGTATGTGGTACATTGTGGTACCAAATCTATGTCGATCCACAAACAAAGACAAGCCATTCAATGGATCTTTTGTAACCTTCCGGGAGAGAGACCAAGCAGGTTCTTGCACATCATTGGCGTTATCCTTGGGACGATCCTCACGAGATTTTGCATCATTATCGCTAACAATATTAGAACTATCATCGGATTTAATCGCATCAAGAGGGAGGTCACCAGGATTATCCTCAAAGGCAGGAGTGGACTCTTTGTCCTCGGATTTGGGGAGTTGGGGTTCCTCAGAGGAAGACACAAAGTCAGTGGTGGTGGCAATGGTGGAGGTGGAGGAAGTTGAAGAGTCAGAAGAAGTGCGAGTGGTGGTTTGCGGGGGAACAGCAGAGTTGGAGGTCAGCATCCATACTCCAAGAACACATAAGGCTAAGAAGACGACAGTTGTAACGGTTGAAGCATAG

Protein sequence

VWYTGVADQTKKPPGLSTRFNSKRSIPPVSSGKKKPPKLATPQPTSNITLVLFPHAISVQSAVDELGATAGESQELTGDLDPILVAFHFSKFCMWYIVVPNLCRSTNKDKPFNGSFVTFRERDQAGSCTSLALSLGRSSRDFASLSLTILELSSDLIASRGRSPGLSSKAGVDSLSSDLGSWGSSEEDTKSVVVAMVEVEEVEESEEVRVVVCGGTAELEVSIHTPRTHKAKKTTVVTVEA
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G031020.1CsGy6G031020.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..42
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 14..28

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G031020Watermelon (97103) v2cgybwmbB394
CsGy6G031020Watermelon (97103) v2cgybwmbB441
CsGy6G031020Watermelon (97103) v2cgybwmbB458
CsGy6G031020Watermelon (97103) v2cgybwmbB479
CsGy6G031020Wax gourdcgybwgoB598
CsGy6G031020Cucurbita moschata (Rifu)cgybcmoB730
CsGy6G031020Cucumber (Gy14) v2cgybcgybB060
CsGy6G031020Cucumber (Gy14) v2cgybcgybB061
CsGy6G031020Cucumber (Gy14) v2cgybcgybB103
CsGy6G031020Cucumber (Gy14) v2cgybcgybB132
CsGy6G031020Cucurbita maxima (Rimu)cgybcmaB721
CsGy6G031020Cucurbita maxima (Rimu)cgybcmaB748
CsGy6G031020Cucurbita maxima (Rimu)cgybcmaB773
CsGy6G031020Cucurbita maxima (Rimu)cgybcmaB846
CsGy6G031020Cucurbita maxima (Rimu)cgybcmaB831
CsGy6G031020Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G031020Cucurbita moschata (Rifu)cgybcmoB703
CsGy6G031020Cucurbita moschata (Rifu)cgybcmoB754
CsGy6G031020Cucurbita moschata (Rifu)cgybcmoB811
CsGy6G031020Cucurbita moschata (Rifu)cgybcmoB827
CsGy6G031020Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G031020Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G031020Cucurbita pepo (Zucchini)cgybcpeB716
CsGy6G031020Cucurbita pepo (Zucchini)cgybcpeB745
CsGy6G031020Cucurbita pepo (Zucchini)cgybcpeB763
CsGy6G031020Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G031020Cucurbita pepo (Zucchini)cgybcpeB823
CsGy6G031020Cucurbita pepo (Zucchini)cgybcpeB881
CsGy6G031020Cucumber (Chinese Long) v2cgybcuB247
CsGy6G031020Cucumber (Chinese Long) v2cgybcuB257
CsGy6G031020Cucumber (Chinese Long) v2cgybcuB272
CsGy6G031020Cucumber (Chinese Long) v2cgybcuB281
CsGy6G031020Bottle gourd (USVL1VR-Ls)cgyblsiB398
CsGy6G031020Bottle gourd (USVL1VR-Ls)cgyblsiB417
CsGy6G031020Bottle gourd (USVL1VR-Ls)cgyblsiB435
CsGy6G031020Bottle gourd (USVL1VR-Ls)cgyblsiB450
CsGy6G031020Melon (DHL92) v3.5.1cgybmeB420
CsGy6G031020Melon (DHL92) v3.5.1cgybmeB427
CsGy6G031020Melon (DHL92) v3.5.1cgybmeB442
CsGy6G031020Melon (DHL92) v3.5.1cgybmeB444
CsGy6G031020Melon (DHL92) v3.6.1cgybmedB417
CsGy6G031020Melon (DHL92) v3.6.1cgybmedB421
CsGy6G031020Melon (DHL92) v3.6.1cgybmedB437
CsGy6G031020Melon (DHL92) v3.6.1cgybmedB440
CsGy6G031020Watermelon (Charleston Gray)cgybwcgB399
CsGy6G031020Watermelon (Charleston Gray)cgybwcgB450
CsGy6G031020Watermelon (Charleston Gray)cgybwcgB471
CsGy6G031020Watermelon (97103) v1cgybwmB445
CsGy6G031020Watermelon (97103) v1cgybwmB453
CsGy6G031020Watermelon (97103) v1cgybwmB463
CsGy6G031020Watermelon (97103) v1cgybwmB468
CsGy6G031020Wild cucumber (PI 183967)cgybcpiB254
CsGy6G031020Wild cucumber (PI 183967)cgybcpiB265
CsGy6G031020Wild cucumber (PI 183967)cgybcpiB279
CsGy6G031020Wild cucumber (PI 183967)cgybcpiB287
CsGy6G031020Silver-seed gourdcarcgybB0418
CsGy6G031020Silver-seed gourdcarcgybB0753
CsGy6G031020Silver-seed gourdcarcgybB0969
CsGy6G031020Silver-seed gourdcarcgybB1006
CsGy6G031020Cucumber (Chinese Long) v3cgybcucB258
CsGy6G031020Cucumber (Chinese Long) v3cgybcucB270
CsGy6G031020Cucumber (Chinese Long) v3cgybcucB287
CsGy6G031020Cucumber (Chinese Long) v3cgybcucB298