CsGy6G029380 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTCTTTAAAAAGACACCATCTTCCCGGGAGACATGATCATCCCTACTAACTCTAACAACCTCCAAAAACCCATAAATTAAAACCCTTCAACTTCAACTTCAACCCCCAACATCCATCCATCCTAGGTTCCTCCATTCACCTCTTCTTTTCTTTTCTTTTTATCCCCCTCCTCCTCTCTCACTCTCCTATTTCTTTTTCCTTTGCCTCATATTTTATTTAATCACTCACTCTTTTCTTTAATCATATTTATATATTGTTTCGTAATTTTTAGGGTTGGCTGATATGTCACTTTTCCCACCTAGTCGGTCTCCTCATAATAATGCTCATGCAAATATGGTATGTAACACTTACGCCTTTTATTTTGAACGCTAAAACCTTTTCTATTTTCCTTCTCCTTTTCCTTTTCATTCTCTTCTCATCTTTATTTGACTATTTTCTTTAACAAACTTTCAAAATGCTATACACAAAACCAGTAACATTTTGACGAAAACAAAATACTTTCAAATAAATGTAAAAATATCAGAACACACCACACGCCCCTTCAAGAGCAATTATTATGTTTTCTAATATGAGCCCATGTATGGTTGTGTTATTCATATTTTATTTAAAAGAGTTGAATTACTTTCGGTAATGCAAATTAAAACATTATTAACAGTTGAATATATGATATATATATAATTAAATTTACATTCATCTACAAACTTAAATTTTTTATTTAATGGGTATTTAAGATGGTATCATAACAGTTGGTTTAGCAATTTTATTTTCTTTCTAATTGATATTGATTTTTTTTTTTTTTTTTTTTTGTCTTTCACATTTTACAAGTTCACTAGGGGAGGGACACACAAAACCTGTAGAACCAACCTATATATTTATAAAATGTAGTAAATTTAATTATACATCTTTTAACATTAGTCTTTTTAGTGCACTTCAAAATATAATTAAATTGTCAACATGGCATAATTTAGTAATTGAGATATTTATCTTTTTCCATTGAAATCAAATGTTTGAACTTTGTTTAAAATTCTAGGGTACTAGGTTTGGAATAATGTTTTTAAGTGCTTAAAAGAAAACAGTTGGAAAATGATTTCAAACATACTTTTATAATTTAGTTATATATATTTAATTCCTTCAGTTTGATGAAAAATGAGTAAAGAATTTAATTTTGAAAAGGTAAAGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGATGAAAATCCGGCGAGAAATTGAGAATGAAATAGAGAGAGATTTGGAGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTTCCGGAAAAATTCCTCTCATATTAACCCGGCGGCGAAAGCCAAGAAGGAGCTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAGGAGGCGCCGCAGCCGGAAAGTCTCCGACCGAGGACTTCCCGGTCCAACACTTTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTCCGGTCGAGTGCAGCGCCGGTGCCGTCTCTCGGAAAGAAACGTCAGGTTTGATTGGAATAATATATACACTTCCGATACTTCCCAATATATGGTGTGCGTTGATAAGCCGACATGTCGTTGTTTATTGGAAATAATGGAAAGATTTTTTTGTTTGTTCCTTTTTCACAAGATTTTTTAATTTTTCTTAAAACCAAAATATTGTAAAATTTTTATACAAAGTGAGATAATTTGACATATACTAATTTGGAATTATTGAGTAATGTATAAAGTATATAATATACATGCA GCTCTTTAAAAAGACACCATCTTCCCGGGAGACATGATCATCCCTACTAACTCTAACAACCTCCAAAAACCCATAAATTAAAACCCTTCAACTTCAACTTCAACCCCCAACATCCATCCATCCTAGGGTTGGCTGATATGTCACTTTTCCCACCTAGTCGGTCTCCTCATAATAATGCTCATGCAAATATGGTAAAGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGATGAAAATCCGGCGAGAAATTGAGAATGAAATAGAGAGAGATTTGGAGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTTCCGGAAAAATTCCTCTCATATTAACCCGGCGGCGAAAGCCAAGAAGGAGCTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAGGAGGCGCCGCAGCCGGAAAGTCTCCGACCGAGGACTTCCCGGTCCAACACTTTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTCCGGTCGAGTGCAGCGCCGGTGCCGTCTCTCGGAAAGAAACGTCAGGTTTGATTGGAATAATATATACACTTCCGATACTTCCCAATATATGGTGTGCGTTGATAAGCCGACATGTCGTTGTTTATTGGAAATAATGGAAAGATTTTTTTGTTTGTTCCTTTTTCACAAGATTTTTTAATTTTTCTTAAAACCAAAATATTGTAAAATTTTTATACAAAGTGAGATAATTTGACATATACTAATTTGGAATTATTGAGTAATGTATAAAGTATATAATATACATGCA ATGTCACTTTTCCCACCTAGTCGGTCTCCTCATAATAATGCTCATGCAAATATGGTAAAGATGGAGGAGAAGGGTTTAAAGCATGAAATTATTTCAGAGGAAGAGATGAAAATCCGGCGAGAAATTGAGAATGAAATAGAGAGAGATTTGGAGGAAGAGATTAAGGGAGGGATATACCAACAAGCTCTCCGCCTTCACCGCCTTTATCACTTCCGGAAAAATTCCTCTCATATTAACCCGGCGGCGAAAGCCAAGAAGGAGCTTTTGGAGGTAAATATCAGCATCAAAATGGATGGGGGGACTAAAATGGAAATAAAAGAGACAAAAAAGGAGGCGCCGCAGCCGGAAAGTCTCCGACCGAGGACTTCCCGGTCCAACACTTTCTCTCGATCTGTCCCGGAGATGAAAAGGTTGGATTGGGCTAAGTCTCTCCGGTCGAGTGCAGCGCCGGTGCCGTCTCTCGGAAAGAAACGTCAGGTTTGA MSLFPPSRSPHNNAHANMVKMEEKGLKHEIISEEEMKIRREIENEIERDLEEEIKGGIYQQALRLHRLYHFRKNSSHINPAAKAKKELLEVNISIKMDGGTKMEIKETKKEAPQPESLRPRTSRSNTFSRSVPEMKRLDWAKSLRSSAAPVPSLGKKRQV
BLAST of CsGy6G029380 vs. NCBI nr
Match: XP_004143553.1 (PREDICTED: uncharacterized protein LOC101209623 [Cucumis sativus] >KGN48717.1 hypothetical protein Csa_6G499120 [Cucumis sativus]) HSP 1 Score: 261.5 bits (667), Expect = 1.8e-66 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CsGy6G029380 vs. NCBI nr
Match: XP_008440564.1 (PREDICTED: uncharacterized protein LOC103484942 [Cucumis melo]) HSP 1 Score: 235.3 bits (599), Expect = 1.4e-58 Identity = 146/160 (91.25%), Postives = 151/160 (94.38%), Query Frame = 0
BLAST of CsGy6G029380 vs. NCBI nr
Match: XP_023003824.1 (uncharacterized protein LOC111497292 [Cucurbita maxima]) HSP 1 Score: 146.4 bits (368), Expect = 8.5e-32 Identity = 107/156 (68.59%), Postives = 118/156 (75.64%), Query Frame = 0
BLAST of CsGy6G029380 vs. NCBI nr
Match: XP_022962743.1 (uncharacterized protein LOC111463142 isoform X1 [Cucurbita moschata]) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 106/152 (69.74%), Postives = 117/152 (76.97%), Query Frame = 0
BLAST of CsGy6G029380 vs. NCBI nr
Match: XP_022962744.1 (uncharacterized protein LOC111463142 isoform X2 [Cucurbita moschata]) HSP 1 Score: 146.0 bits (367), Expect = 1.1e-31 Identity = 106/152 (69.74%), Postives = 117/152 (76.97%), Query Frame = 0
BLAST of CsGy6G029380 vs. TAIR10
Match: AT1G26290.1 (unknown protein) HSP 1 Score: 48.1 bits (113), Expect = 5.7e-06 Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of CsGy6G029380 vs. TrEMBL
Match: tr|A0A0A0KJZ6|A0A0A0KJZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G499120 PE=4 SV=1) HSP 1 Score: 261.5 bits (667), Expect = 1.2e-66 Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0
BLAST of CsGy6G029380 vs. TrEMBL
Match: tr|A0A1S3B1F7|A0A1S3B1F7_CUCME (uncharacterized protein LOC103484942 OS=Cucumis melo OX=3656 GN=LOC103484942 PE=4 SV=1) HSP 1 Score: 235.3 bits (599), Expect = 9.3e-59 Identity = 146/160 (91.25%), Postives = 151/160 (94.38%), Query Frame = 0
BLAST of CsGy6G029380 vs. TrEMBL
Match: tr|B9SXI4|B9SXI4_RICCO (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_0071070 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 2.6e-13 Identity = 56/133 (42.11%), Postives = 76/133 (57.14%), Query Frame = 0
BLAST of CsGy6G029380 vs. TrEMBL
Match: tr|A0A2P4JJ01|A0A2P4JJ01_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_71541 PE=4 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 4.5e-13 Identity = 54/106 (50.94%), Postives = 67/106 (63.21%), Query Frame = 0
BLAST of CsGy6G029380 vs. TrEMBL
Match: tr|W9S4K6|W9S4K6_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_008554 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12 Identity = 52/99 (52.53%), Postives = 67/99 (67.68%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |