CsGy6G027760 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G027760
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 26843157 .. 26844071 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGACGCATCTTTGGCTTATCTCGCAAGGATGGTTTTGGGTTGGTGGTCACAGATGCACATGGAGTTATGGTCATACGTCTTGGGCTTGCAAGGATGAGTTTGGGTTTGTGGTTAGAGATGCACATGGAGCTATGGTCATGTAGCTAGATTTATCGAGGGTTTGGTTGATGTGTTTGAAGCCAATCTTTATTGTTGGGTTTTCAAGTGTGTGTGAGATGAACTTACAACCTATTTGAGTTGGGTTTGATTCACAAACAAATATCATAAGTGCAAAATCACGACTATTTGAGTAATTCCATGTTGGGTTCTTATGGCATAAATTATGGATCTCGTCGGTCGAATTAATGTCCATGTGTACTACATTTCAATGACTTCAAATGGTGTGACTCATTGCCTTGTCAGGTGGACTTCAACCAATGTTAAGCTAGTTACAATGATGGTTGTTTCCACTTGGTGTGACATATTTTGGAGGGTGATAGTTATTGTGTAACCTAGGGTCTCGTTAGTTTTGGTTTTTGTTTTTTTTTTTATCTTATTAGATGTTGAAGGTTGGATCTCTCATTTTATCAAATATTATACTAAAGAATATAAGATGGAAACATTCTCAATCATGTTGGCCTATAGTGATTGTATTGTTATTTTGGATATATGCTTGCCAGTTACAAAACAAGCTTTTTTGGACTATATTTATTTTGTGTTTTTAAAATTTAAAATTTTCTAATTTTTTGTTTTGGGAAGGAAAAATGAATGTTAACCCTTTATTTTTCTTCCTACTTTGTTCCATTGTGTAACATATGGTCTCATATTAGTTTTAAATAACTGGTTGATTTATTTTATTTCGTATAAAATGAATATCAATATGTTTTTATAGTATTATTTAGTCTAATAATATATGTATGGGTGATGATTGA

mRNA sequence

ATGTTGACGCATCTTTGGCTTATCTCGCAAGGATGGTTTTGGGTTGGTGGTCACAGATGCACATGGAGTTATGGTCATACGTCTTGGGCTTGCAAGGATGAGTTTGGGTTTGTGGTTAGAGATGCACATGGAGCTATGATGTTGAAGGTTGGATCTCTCATTTTATCAAATATTATACTAAAGAATATAAGATGGAAACATTCTCAATCATGTTGGCCTATATCTAATAATATATGTATGGGTGATGATTGA

Coding sequence (CDS)

ATGTTGACGCATCTTTGGCTTATCTCGCAAGGATGGTTTTGGGTTGGTGGTCACAGATGCACATGGAGTTATGGTCATACGTCTTGGGCTTGCAAGGATGAGTTTGGGTTTGTGGTTAGAGATGCACATGGAGCTATGATGTTGAAGGTTGGATCTCTCATTTTATCAAATATTATACTAAAGAATATAAGATGGAAACATTCTCAATCATGTTGGCCTATATCTAATAATATATGTATGGGTGATGATTGA

Protein sequence

MLTHLWLISQGWFWVGGHRCTWSYGHTSWACKDEFGFVVRDAHGAMMLKVGSLILSNIILKNIRWKHSQSCWPISNNICMGDD
Homology
[Close]
BLAST of CsGy6G027760 vs. NCBI nr
Match: KGN48542.1 (hypothetical protein Csa_6G491050 [Cucumis sativus])

HSP 1 Score: 68.9 bits (167), Expect = 9.0e-09
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0 

Query: 20 CTWSYGHTSWACKDEFGFVVRDAHGAMML 49
          CTWSYGHTSWACKDEFGFVVRDAHGAM++
Sbjct: 21 CTWSYGHTSWACKDEFGFVVRDAHGAMVM 49

[Close]
BLAST of CsGy6G027760 vs. TrEMBL
Match: tr|A0A0A0KJK7|A0A0A0KJK7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491050 PE=4 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 6.0e-09
Identity = 27/29 (93.10%), Postives = 29/29 (100.00%), Query Frame = 0 

Query: 20 CTWSYGHTSWACKDEFGFVVRDAHGAMML 49
          CTWSYGHTSWACKDEFGFVVRDAHGAM++
Sbjct: 21 CTWSYGHTSWACKDEFGFVVRDAHGAMVM 49

The following BLAST results are available for this feature:
BLAST of CsGy6G027760 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48542.19.0e-0993.10hypothetical protein Csa_6G491050 [Cucumis sativus][more]
BLAST of CsGy6G027760 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G027760 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G027760 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KJK7|A0A0A0KJK7_CUCSA6.0e-0993.10Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G491050 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G027760.1CsGy6G027760.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G027760Csa6G491050Cucumber (Chinese Long) v2cgybcuB281
CsGy6G027760CsaV3_6G043420Cucumber (Chinese Long) v3cgybcucB298
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G027760Cucumber (Gy14) v2cgybcgybB064
CsGy6G027760Cucumber (Gy14) v2cgybcgybB129
CsGy6G027760Cucurbita maxima (Rimu)cgybcmaB699
CsGy6G027760Cucurbita maxima (Rimu)cgybcmaB715
CsGy6G027760Cucurbita maxima (Rimu)cgybcmaB750
CsGy6G027760Cucurbita maxima (Rimu)cgybcmaB779
CsGy6G027760Cucurbita maxima (Rimu)cgybcmaB831
CsGy6G027760Cucurbita maxima (Rimu)cgybcmaB848
CsGy6G027760Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G027760Cucurbita moschata (Rifu)cgybcmoB682
CsGy6G027760Cucurbita moschata (Rifu)cgybcmoB699
CsGy6G027760Cucurbita moschata (Rifu)cgybcmoB732
CsGy6G027760Cucurbita moschata (Rifu)cgybcmoB758
CsGy6G027760Cucurbita moschata (Rifu)cgybcmoB811
CsGy6G027760Cucurbita moschata (Rifu)cgybcmoB822
CsGy6G027760Cucurbita moschata (Rifu)cgybcmoB831
CsGy6G027760Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G027760Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G027760Cucurbita pepo (Zucchini)cgybcpeB719
CsGy6G027760Cucurbita pepo (Zucchini)cgybcpeB747
CsGy6G027760Cucurbita pepo (Zucchini)cgybcpeB805
CsGy6G027760Cucurbita pepo (Zucchini)cgybcpeB820
CsGy6G027760Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G027760Cucurbita pepo (Zucchini)cgybcpeB868
CsGy6G027760Cucurbita pepo (Zucchini)cgybcpeB876
CsGy6G027760Cucumber (Chinese Long) v2cgybcuB249
CsGy6G027760Cucumber (Chinese Long) v2cgybcuB269
CsGy6G027760Bottle gourd (USVL1VR-Ls)cgyblsiB398
CsGy6G027760Bottle gourd (USVL1VR-Ls)cgyblsiB422
CsGy6G027760Bottle gourd (USVL1VR-Ls)cgyblsiB441
CsGy6G027760Melon (DHL92) v3.5.1cgybmeB412
CsGy6G027760Melon (DHL92) v3.5.1cgybmeB443
CsGy6G027760Melon (DHL92) v3.5.1cgybmeB444
CsGy6G027760Melon (DHL92) v3.6.1cgybmedB410
CsGy6G027760Melon (DHL92) v3.6.1cgybmedB438
CsGy6G027760Melon (DHL92) v3.6.1cgybmedB440
CsGy6G027760Watermelon (Charleston Gray)cgybwcgB399
CsGy6G027760Watermelon (Charleston Gray)cgybwcgB432
CsGy6G027760Watermelon (Charleston Gray)cgybwcgB461
CsGy6G027760Watermelon (97103) v1cgybwmB432
CsGy6G027760Watermelon (97103) v1cgybwmB460
CsGy6G027760Watermelon (97103) v1cgybwmB468
CsGy6G027760Wild cucumber (PI 183967)cgybcpiB257
CsGy6G027760Wild cucumber (PI 183967)cgybcpiB276
CsGy6G027760Wild cucumber (PI 183967)cgybcpiB287
CsGy6G027760Silver-seed gourdcarcgybB0198
CsGy6G027760Silver-seed gourdcarcgybB0388
CsGy6G027760Silver-seed gourdcarcgybB0418
CsGy6G027760Silver-seed gourdcarcgybB0799
CsGy6G027760Cucumber (Chinese Long) v3cgybcucB262
CsGy6G027760Cucumber (Chinese Long) v3cgybcucB282
CsGy6G027760Cucumber (Chinese Long) v3cgybcucB285
CsGy6G027760Cucumber (Chinese Long) v3cgybcucB308
CsGy6G027760Watermelon (97103) v2cgybwmbB394
CsGy6G027760Watermelon (97103) v2cgybwmbB439
CsGy6G027760Watermelon (97103) v2cgybwmbB470
CsGy6G027760Wax gourdcgybwgoB548
CsGy6G027760Wax gourdcgybwgoB591
CsGy6G027760Wax gourdcgybwgoB616