CsGy6G027170 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G027170
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionB3 domain-containing protein Os12g0591400-like isoform X2
LocationChr6 : 26430712 .. 26431733 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GCAGAAGAAGAGTGCAAGTATATATTCAGGGAGATTCCACGTTGTAAGGAAAGAGTAATCCCAAAACATGAAGCGAAGGTTTCAAGGAAAGAACAACCATCACCAGAGAAAGTTGAAACAGTTCAAAGATTCAGTTCTAAATCAGATCGTAAACCTTCCTTCGAAGTTGTCATGCGACAGTCCAACGTACAAGGTAGATTTAACATGGTAAGCCCCTCATGTTTTATTAGTCCCCCATTGAACTCTCTTGTTTGATCTATTAATATATTTTTCATTTATGTCTTGGAGGTTATTCCCTATGACTTTGCTGTGAAATGTTTATCCGAGGAAGTTGGGACCATTGAACTTCAAACTACAAATGGTAGAAGTTGGCAAATTCTGTACAAATGGCGTCGAACGGATCGAGCAGCTTACGCATACATTTCAAGTGGTTGGAAGCATTTTGCTGAGGACAATCGCTTGAAAGAAGGGGATATTGGACTGTTTCAATTGATTAACAAACACATTTTTCTGTTCACTAAATTACAAAACAATTCCCTTCCAGCTGACGGAGAAACTGCAGCAACAGAAAATCCCTTCTTTGAAGTGAACATCTCCTCCAAAAGCTACGAGAATTCGTTTCTGGTAACTTTTTTTTAAAAAAAAAACTTACCTTTTTCAATTTGATATGTATTTACGTGTGAATCTTGATGGAATTTGAATAATTTTTGTGACAGAACATTCCTTTGAAATTTGCAAATAAGTACTTTTCACCAGAAATGCACTCTGCTGACCTTCAAGTTGGGAACAAAAAATGGAATGTGATGTTAAAGCAATATGAAAGTTATGTTAGATTCTCAAGTGGTTGGGGCACATTTCTTGGTGAAAATGGTTTGAAAGATGGAGACAAATGTTTGTTTGAAATGGTTAATACAGAACACTGTGTTTTTAAGGTAAGCTTTTCTAGAAATGTTTAAACCTCAGCCTCTCTATGGACAGGAATATTCTAATGCCAAAACTTTGCTCTTCTTTAGACTTTTATT

mRNA sequence

GCAGAAGAAGAGTGCAAGTATATATTCAGGGAGATTCCACGTTGTAAGGAAAGAGTAATCCCAAAACATGAAGCGAAGGTTTCAAGGAAAGAACAACCATCACCAGAGAAAGTTGAAACAGTTCAAAGATTCAGTTCTAAATCAGATCGTAAACCTTCCTTCGAAGTTGTCATGCGACAGTCCAACGTACAAGGTAGATTTAACATGGTTATTCCCTATGACTTTGCTGTGAAATGTTTATCCGAGGAAGTTGGGACCATTGAACTTCAAACTACAAATGGTAGAAGTTGGCAAATTCTGTACAAATGGCGTCGAACGGATCGAGCAGCTTACGCATACATTTCAAGTGGTTGGAAGCATTTTGCTGAGGACAATCGCTTGAAAGAAGGGGATATTGGACTGTTTCAATTGATTAACAAACACATTTTTCTGTTCACTAAATTACAAAACAATTCCCTTCCAGCTGACGGAGAAACTGCAGCAACAGAAAATCCCTTCTTTGAAGTGAACATCTCCTCCAAAAGCTACGAGAATTCGTTTCTGAACATTCCTTTGAAATTTGCAAATAAGTACTTTTCACCAGAAATGCACTCTGCTGACCTTCAAGTTGGGAACAAAAAATGGAATGTGATGTTAAAGCAATATGAAAGTTATGTTAGATTCTCAAGTGGTTGGGGCACATTTCTTGGTGAAAATGGTTTGAAAGATGGAGACAAATGTTTGTTTGAAATGGTTAATACAGAACACTGTGTTTTTAAGGTAAGCTTTTCTAGAAATGTTTAAACCTCAGCCTCTCTATGGACAGGAATATTCTAATGCCAAAACTTTGCTCTTCTTTAGACTTTTATT

Coding sequence (CDS)

GCAGAAGAAGAGTGCAAGTATATATTCAGGGAGATTCCACGTTGTAAGGAAAGAGTAATCCCAAAACATGAAGCGAAGGTTTCAAGGAAAGAACAACCATCACCAGAGAAAGTTGAAACAGTTCAAAGATTCAGTTCTAAATCAGATCGTAAACCTTCCTTCGAAGTTGTCATGCGACAGTCCAACGTACAAGGTAGATTTAACATGGTTATTCCCTATGACTTTGCTGTGAAATGTTTATCCGAGGAAGTTGGGACCATTGAACTTCAAACTACAAATGGTAGAAGTTGGCAAATTCTGTACAAATGGCGTCGAACGGATCGAGCAGCTTACGCATACATTTCAAGTGGTTGGAAGCATTTTGCTGAGGACAATCGCTTGAAAGAAGGGGATATTGGACTGTTTCAATTGATTAACAAACACATTTTTCTGTTCACTAAATTACAAAACAATTCCCTTCCAGCTGACGGAGAAACTGCAGCAACAGAAAATCCCTTCTTTGAAGTGAACATCTCCTCCAAAAGCTACGAGAATTCGTTTCTGAACATTCCTTTGAAATTTGCAAATAAGTACTTTTCACCAGAAATGCACTCTGCTGACCTTCAAGTTGGGAACAAAAAATGGAATGTGATGTTAAAGCAATATGAAAGTTATGTTAGATTCTCAAGTGGTTGGGGCACATTTCTTGGTGAAAATGGTTTGAAAGATGGAGACAAATGTTTGTTTGAAATGGTTAATACAGAACACTGTGTTTTTAAGGTAAGCTTTTCTAGAAATGTTTAA

Protein sequence

AEEECKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQGRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAEDNRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFLNIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCLFEMVNTEHCVFKVSFSRNV
Homology
[Close]
BLAST of CsGy6G027170 vs. NCBI nr
Match: XP_004142019.2 (PREDICTED: B3 domain-containing transcription factor VRN1 [Cucumis sativus] >KGN48483.1 hypothetical protein Csa_6G489990 [Cucumis sativus])

HSP 1 Score: 528.1 bits (1359), Expect = 1.7e-146
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0 

Query: 5   CKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQ 64
           CKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQ
Sbjct: 175 CKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQ 234

Query: 65  GRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAED 124
           GRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAED
Sbjct: 235 GRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAED 294

Query: 125 NRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFLNIP 184
           NRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFLNIP
Sbjct: 295 NRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFLNIP 354

Query: 185 LKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCLFEM 244
           LKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCLFEM
Sbjct: 355 LKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCLFEM 414

Query: 245 VNTEHCVFKVSFSRNV 261
           VNTEHCVFKVSFSRNV
Sbjct: 415 VNTEHCVFKVSFSRNV 430

[Close]
BLAST of CsGy6G027170 vs. NCBI nr
Match: XP_008440217.1 (PREDICTED: B3 domain-containing protein Os12g0591400-like isoform X2 [Cucumis melo])

HSP 1 Score: 409.8 bits (1052), Expect = 6.7e-111
Identity = 205/259 (79.15%), Postives = 221/259 (85.33%), Query Frame = 0 

Query: 2   EEECKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQS 61
           EEEC YIFREIP CK+R+IPKHE KVSRK+QPSP+KVETVQRFSSKSD +PSF+VVMRQS
Sbjct: 32  EEECNYIFREIPSCKKRLIPKHEIKVSRKKQPSPKKVETVQRFSSKSDHQPSFKVVMRQS 91

Query: 62  NVQGRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHF 121
           NVQGRFNMVIPYDFAVK LSEE+GTI+LQTT+ R+WQ+LYKW RTDRA YAYISSGWKHF
Sbjct: 92  NVQGRFNMVIPYDFAVKYLSEEIGTIKLQTTDCRNWQLLYKWCRTDRATYAYISSGWKHF 151

Query: 122 AEDNRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFL 181
           AEDNRLKEGDIGLFQL+NKH F FTKLQNNSLP + ETAAT NPFFE             
Sbjct: 152 AEDNRLKEGDIGLFQLVNKHSFSFTKLQNNSLPPEKETAATGNPFFE------------- 211

Query: 182 NIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCL 241
           NIPLKFAN+YFSPEM SADLQVGNKKWNV+LKQYE         GTF GE+GLKDGDKCL
Sbjct: 212 NIPLKFANEYFSPEMQSADLQVGNKKWNVILKQYEDSQVVG---GTFRGESGLKDGDKCL 271

Query: 242 FEMVNTEHCVFKVSFSRNV 261
           FEMVNTE CVFKVSFSRNV
Sbjct: 272 FEMVNTEQCVFKVSFSRNV 274

[Close]
BLAST of CsGy6G027170 vs. NCBI nr
Match: XP_008440216.1 (PREDICTED: uncharacterized protein LOC103484739 isoform X1 [Cucumis melo])

HSP 1 Score: 395.6 bits (1015), Expect = 1.3e-106
Identity = 205/285 (71.93%), Postives = 221/285 (77.54%), Query Frame = 0 

Query: 2   EEECKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQS 61
           EEEC YIFREIP CK+R+IPKHE KVSRK+QPSP+KVETVQRFSSKSD +PSF+VVMRQS
Sbjct: 32  EEECNYIFREIPSCKKRLIPKHEIKVSRKKQPSPKKVETVQRFSSKSDHQPSFKVVMRQS 91

Query: 62  NVQGRFNM--------------------------VIPYDFAVKCLSEEVGTIELQTTNGR 121
           NVQGRFNM                          VIPYDFAVK LSEE+GTI+LQTT+ R
Sbjct: 92  NVQGRFNMVSPSCFINPPLNSLFDLLIYFSFVLEVIPYDFAVKYLSEEIGTIKLQTTDCR 151

Query: 122 SWQILYKWRRTDRAAYAYISSGWKHFAEDNRLKEGDIGLFQLINKHIFLFTKLQNNSLPA 181
           +WQ+LYKW RTDRA YAYISSGWKHFAEDNRLKEGDIGLFQL+NKH F FTKLQNNSLP 
Sbjct: 152 NWQLLYKWCRTDRATYAYISSGWKHFAEDNRLKEGDIGLFQLVNKHSFSFTKLQNNSLPP 211

Query: 182 DGETAATENPFFEVNISSKSYENSFLNIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQY 241
           + ETAAT NPFFE             NIPLKFAN+YFSPEM SADLQVGNKKWNV+LKQY
Sbjct: 212 EKETAATGNPFFE-------------NIPLKFANEYFSPEMQSADLQVGNKKWNVILKQY 271

Query: 242 ESYVRFSSGWGTFLGENGLKDGDKCLFEMVNTEHCVFKVSFSRNV 261
           E         GTF GE+GLKDGDKCLFEMVNTE CVFKVSFSRNV
Sbjct: 272 EDSQVVG---GTFRGESGLKDGDKCLFEMVNTEQCVFKVSFSRNV 300

[Close]
BLAST of CsGy6G027170 vs. NCBI nr
Match: XP_004142020.2 (PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X1 [Cucumis sativus] >KGN48482.1 hypothetical protein Csa_6G489980 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 2.7e-104
Identity = 190/260 (73.08%), Postives = 215/260 (82.69%), Query Frame = 0 

Query: 2   EEECKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQS 61
           EEEC  + RE P CK+RV+PKHE K SRK+Q SP KVET QRFSSKSD KPSF+VVMR++
Sbjct: 179 EEECNNVSRETPSCKKRVVPKHEVKASRKKQQSPRKVETTQRFSSKSDHKPSFKVVMRRN 238

Query: 62  NVQGRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHF 121
           NVQGRFNMVIP+DFAVK LSEE GTI LQ TNGR+WQ+LYKW RTDRA +AYISSGWKHF
Sbjct: 239 NVQGRFNMVIPHDFAVKYLSEESGTINLQITNGRNWQLLYKWCRTDRATFAYISSGWKHF 298

Query: 122 AEDNRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFL 181
            E NRLKEGDIGLFQLINKH  LFT+LQNNSL    +TA T NPFFEV+I SKSY NS+L
Sbjct: 299 VEKNRLKEGDIGLFQLINKHNMLFTELQNNSLSPKKKTATTGNPFFEVDIVSKSYMNSYL 358

Query: 182 NIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYE-SYVRFSSGWGTFLGENGLKDGDKC 241
           NIP +FA  YFSP+M SA LQVGNKKW+V +K+Y  S+VRF++GWGTF  ENGL+DGD C
Sbjct: 359 NIPRRFAGAYFSPKMQSASLQVGNKKWDVSIKKYACSHVRFAAGWGTFHSENGLEDGDTC 418

Query: 242 LFEMVNTEHCVFKVSFSRNV 261
           LFEMVNT+ CV KVS  R V
Sbjct: 419 LFEMVNTKLCVLKVSIFRKV 438

[Close]
BLAST of CsGy6G027170 vs. NCBI nr
Match: XP_011657839.1 (PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X2 [Cucumis sativus])

HSP 1 Score: 387.9 bits (995), Expect = 2.7e-104
Identity = 190/260 (73.08%), Postives = 215/260 (82.69%), Query Frame = 0 

Query: 2   EEECKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQS 61
           EEEC  + RE P CK+RV+PKHE K SRK+Q SP KVET QRFSSKSD KPSF+VVMR++
Sbjct: 178 EEECNNVSRETPSCKKRVVPKHEVKASRKKQQSPRKVETTQRFSSKSDHKPSFKVVMRRN 237

Query: 62  NVQGRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHF 121
           NVQGRFNMVIP+DFAVK LSEE GTI LQ TNGR+WQ+LYKW RTDRA +AYISSGWKHF
Sbjct: 238 NVQGRFNMVIPHDFAVKYLSEESGTINLQITNGRNWQLLYKWCRTDRATFAYISSGWKHF 297

Query: 122 AEDNRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFL 181
            E NRLKEGDIGLFQLINKH  LFT+LQNNSL    +TA T NPFFEV+I SKSY NS+L
Sbjct: 298 VEKNRLKEGDIGLFQLINKHNMLFTELQNNSLSPKKKTATTGNPFFEVDIVSKSYMNSYL 357

Query: 182 NIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYE-SYVRFSSGWGTFLGENGLKDGDKC 241
           NIP +FA  YFSP+M SA LQVGNKKW+V +K+Y  S+VRF++GWGTF  ENGL+DGD C
Sbjct: 358 NIPRRFAGAYFSPKMQSASLQVGNKKWDVSIKKYACSHVRFAAGWGTFHSENGLEDGDTC 417

Query: 242 LFEMVNTEHCVFKVSFSRNV 261
           LFEMVNT+ CV KVS  R V
Sbjct: 418 LFEMVNTKLCVLKVSIFRKV 437

[Close]
BLAST of CsGy6G027170 vs. TAIR10
Match: AT1G49480.1 (related to vernalization1 1)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-10
Identity = 35/102 (34.31%), Postives = 50/102 (49.02%), Query Frame = 0 

Query: 158 ETAATENPFFEVNI-SSKSYENSFLNIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYE 217
           +T    NP+F V +  S  Y    + +P  FA KY S       LQ+G K+W V      
Sbjct: 120 KTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKA 179

Query: 218 SYVRFSSGWGTFLGENGLKDGDKCLFEMVNTEHCVFKVSFSR 259
              +FS GW  F  EN + +GD C+FE++ T   V +V+  R
Sbjct: 180 GRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221

[Close]
BLAST of CsGy6G027170 vs. TAIR10
Match: AT3G18990.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-10
Identity = 36/102 (35.29%), Postives = 49/102 (48.04%), Query Frame = 0 

Query: 158 ETAATENPFFEVNI-SSKSYENSFLNIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYE 217
           +T    NPFF V +  S  Y    + +P  FA KY S       +Q+  K+W V      
Sbjct: 235 KTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKA 294

Query: 218 SYVRFSSGWGTFLGENGLKDGDKCLFEMVNTEHCVFKVSFSR 259
              +FS GW  F  EN L +GD C+FE++ T   V KV+  R
Sbjct: 295 GRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336

[Close]
BLAST of CsGy6G027170 vs. TAIR10
Match: AT5G58280.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 52.8 bits (125), Expect = 3.8e-07
Identity = 44/138 (31.88%), Postives = 66/138 (47.83%), Query Frame = 0 

Query: 21  PKHEAKVSRKEQP--SPEKVETVQRFSSKSDRKPSFEVVMRQSNVQGRFNMVIPYDFAVK 80
           P HE K +  E+   + +  E  QR  S     P F   M +S+V   F + +P  F   
Sbjct: 94  PLHECKFASYEEKVGAFKAAEKFQR--SLKSPHPYFVKSMVRSHVYSCFWLGLPSRFCAD 153

Query: 81  CLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAEDNRLKEGDIGLFQLI 140
              EE   IEL+   G  ++ +Y  RR      A +S GWK FA D++L +GD  LF+L+
Sbjct: 154 NFPEETMEIELEDEEGEVYEAVYIGRR------AGLSGGWKRFALDHKLDDGDALLFELV 213

Query: 141 NK---HIFLFTKLQNNSL 154
                 I++F   +N +L
Sbjct: 214 EPKKFKIYVFKGNENANL 223

[Close]
BLAST of CsGy6G027170 vs. TAIR10
Match: AT4G31690.1 (Transcriptional factor B3 family protein)

HSP 1 Score: 49.7 bits (117), Expect = 3.2e-06
Identity = 49/214 (22.90%), Postives = 86/214 (40.19%), Query Frame = 0 

Query: 68  NMVIPYDFAVKCL--SEEVGTIELQT-TNGRSWQILYKWRRTDRAAYAYISSGWKHFAED 127
           N+ IP ++  + +    E  T+ L+T  + R+W++  +  R        ++ GWK F E 
Sbjct: 25  NLKIPVNYFSEHIEGKHEGKTVTLRTDASERTWEVKMEGHR--------LTEGWKEFVEA 84

Query: 128 NRLKEGDIGLFQLINKHIFLFTKL---------QNNSLPADGE----------------- 187
           + L+ GD  +F+     +F  T L           +S   +GE                 
Sbjct: 85  HDLRIGDFVVFRHEGDMVFHVTALGPSCCEIQYPQSSRHEEGEESGENEXXXXXXXXXXX 144

Query: 188 ----TAATENPFFEVNISSKSYENSFLNIPLKFANKY-FSPEMHSADL-QVGNKKWNVML 246
                ++++   F  +++  +     +++P  F  +  FS   H   L     K W   +
Sbjct: 145 XXXXKSSSDLNCFSQSVTHSNISRDAVSVPRDFVKRSGFSKGRHEIVLMNEEGKSWESEV 204

[Close]
BLAST of CsGy6G027170 vs. TAIR10
Match: AT4G33280.1 (AP2/B3-like transcriptional factor family protein)

HSP 1 Score: 48.1 bits (113), Expect = 9.3e-06
Identity = 27/86 (31.40%), Postives = 46/86 (53.49%), Query Frame = 0 

Query: 54  FEVVMRQSNVQGRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAY 113
           F V M++S+V  +  + IPY + VK +      + +Q    + W++  K+          
Sbjct: 223 FLVFMKRSHVVSKCFLTIPYKWCVKNMLITRQEVVMQVDQTK-WEM--KFNIFGARGSGG 282

Query: 114 ISSGWKHFAEDNRLKEGDIGLFQLIN 140
           IS+GWK F +DN L+EGD+ +F+  N
Sbjct: 283 ISTGWKKFVQDNNLREGDVCVFEPAN 305

[Close]
BLAST of CsGy6G027170 vs. Swiss-Prot
Match: sp|Q9XIB5|REM19_ARATH (B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.1e-09
Identity = 35/102 (34.31%), Postives = 50/102 (49.02%), Query Frame = 0 

Query: 158 ETAATENPFFEVNI-SSKSYENSFLNIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYE 217
           +T    NP+F V +  S  Y    + +P  FA KY S       LQ+G K+W V      
Sbjct: 120 KTFEPTNPYFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKLQLGEKQWPVRCLYKA 179

Query: 218 SYVRFSSGWGTFLGENGLKDGDKCLFEMVNTEHCVFKVSFSR 259
              +FS GW  F  EN + +GD C+FE++ T   V +V+  R
Sbjct: 180 GRAKFSQGWYEFTLENNIGEGDVCVFELLRTRDFVLEVTAFR 221

[Close]
BLAST of CsGy6G027170 vs. Swiss-Prot
Match: sp|Q8L3W1|VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 GN=VRN1 PE=1 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 5.1e-09
Identity = 36/102 (35.29%), Postives = 49/102 (48.04%), Query Frame = 0 

Query: 158 ETAATENPFFEVNI-SSKSYENSFLNIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYE 217
           +T    NPFF V +  S  Y    + +P  FA KY S       +Q+  K+W V      
Sbjct: 235 KTFEPTNPFFRVVLRPSYLYRGCIMYLPSGFAEKYLSGISGFIKVQLAEKQWPVRCLYKA 294

Query: 218 SYVRFSSGWGTFLGENGLKDGDKCLFEMVNTEHCVFKVSFSR 259
              +FS GW  F  EN L +GD C+FE++ T   V KV+  R
Sbjct: 295 GRAKFSQGWYEFTLENNLGEGDVCVFELLRTRDFVLKVTAFR 336

[Close]
BLAST of CsGy6G027170 vs. Swiss-Prot
Match: sp|Q9FHB2|Y5828_ARATH (Putative B3 domain-containing protein At5g58280 OS=Arabidopsis thaliana OX=3702 GN=At5g58280 PE=3 SV=1)

HSP 1 Score: 52.8 bits (125), Expect = 6.8e-06
Identity = 44/138 (31.88%), Postives = 66/138 (47.83%), Query Frame = 0 

Query: 21  PKHEAKVSRKEQP--SPEKVETVQRFSSKSDRKPSFEVVMRQSNVQGRFNMVIPYDFAVK 80
           P HE K +  E+   + +  E  QR  S     P F   M +S+V   F + +P  F   
Sbjct: 94  PLHECKFASYEEKVGAFKAAEKFQR--SLKSPHPYFVKSMVRSHVYSCFWLGLPSRFCAD 153

Query: 81  CLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAEDNRLKEGDIGLFQLI 140
              EE   IEL+   G  ++ +Y  RR      A +S GWK FA D++L +GD  LF+L+
Sbjct: 154 NFPEETMEIELEDEEGEVYEAVYIGRR------AGLSGGWKRFALDHKLDDGDALLFELV 213

Query: 141 NK---HIFLFTKLQNNSL 154
                 I++F   +N +L
Sbjct: 214 EPKKFKIYVFKGNENANL 223

[Close]
BLAST of CsGy6G027170 vs. Swiss-Prot
Match: sp|Q851W5|Y3204_ORYSJ (B3 domain-containing protein Os03g0620400 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0620400 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.2e-05
Identity = 38/117 (32.48%), Postives = 58/117 (49.57%), Query Frame = 0 

Query: 26  KVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNV--QGRFNMVIPYDFAVKCLSEE 85
           +VS  E+   +  E V    S+    P +  +M +SNV   G + ++    FA + L E 
Sbjct: 391 RVSLTEEQVRKVEEVVHSIQSEG---PMYVSIMNKSNVGTDGLYIIIFGRQFATRYLPEG 450

Query: 86  VGTIE-LQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAEDNRLKEGDIGLFQLIN 140
             T+  L T    +WQ+  + R  D      I++GW+HF  DN L+  DI LFQL+N
Sbjct: 451 EQTLTLLMTGKSNAWQVKMRPRSGDA---QMITTGWRHFVHDNHLQIEDICLFQLMN 501

[Close]
BLAST of CsGy6G027170 vs. Swiss-Prot
Match: sp|Q851V5|Y3216_ORYSJ (Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0621600 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.0e-05
Identity = 36/123 (29.27%), Postives = 62/123 (50.41%), Query Frame = 0 

Query: 19   VIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQGRFNMV-IPYDFAV 78
            ++PKH      ++Q    KV  +          P +  ++R+S V G+   V I  ++A 
Sbjct: 904  ILPKHTRLTDMQKQQLESKVGAIH------SEIPIYGCILRKSRVHGKSQTVDICREYAD 963

Query: 79   KCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAEDNRLKEGDIGLFQL 138
              L  +   + LQ  +G++W++L    RT       +S+GW  FA++N L+ GDI LF+L
Sbjct: 964  VYLPFKELNMTLQ-RHGKNWEVLC---RTKDTRTKRLSTGWSRFAQENNLQVGDICLFEL 1016

Query: 139  INK 141
            + K
Sbjct: 1024 LKK 1016

[Close]
BLAST of CsGy6G027170 vs. TrEMBL
Match: tr|A0A0A0KG44|A0A0A0KG44_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G489990 PE=4 SV=1)

HSP 1 Score: 528.1 bits (1359), Expect = 1.1e-146
Identity = 256/256 (100.00%), Postives = 256/256 (100.00%), Query Frame = 0 

Query: 5   CKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQ 64
           CKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQ
Sbjct: 175 CKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQ 234

Query: 65  GRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAED 124
           GRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAED
Sbjct: 235 GRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAED 294

Query: 125 NRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFLNIP 184
           NRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFLNIP
Sbjct: 295 NRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFLNIP 354

Query: 185 LKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCLFEM 244
           LKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCLFEM
Sbjct: 355 LKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCLFEM 414

Query: 245 VNTEHCVFKVSFSRNV 261
           VNTEHCVFKVSFSRNV
Sbjct: 415 VNTEHCVFKVSFSRNV 430

[Close]
BLAST of CsGy6G027170 vs. TrEMBL
Match: tr|A0A1S3B070|A0A1S3B070_CUCME (B3 domain-containing protein Os12g0591400-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484739 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 4.5e-111
Identity = 205/259 (79.15%), Postives = 221/259 (85.33%), Query Frame = 0 

Query: 2   EEECKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQS 61
           EEEC YIFREIP CK+R+IPKHE KVSRK+QPSP+KVETVQRFSSKSD +PSF+VVMRQS
Sbjct: 32  EEECNYIFREIPSCKKRLIPKHEIKVSRKKQPSPKKVETVQRFSSKSDHQPSFKVVMRQS 91

Query: 62  NVQGRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHF 121
           NVQGRFNMVIPYDFAVK LSEE+GTI+LQTT+ R+WQ+LYKW RTDRA YAYISSGWKHF
Sbjct: 92  NVQGRFNMVIPYDFAVKYLSEEIGTIKLQTTDCRNWQLLYKWCRTDRATYAYISSGWKHF 151

Query: 122 AEDNRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFL 181
           AEDNRLKEGDIGLFQL+NKH F FTKLQNNSLP + ETAAT NPFFE             
Sbjct: 152 AEDNRLKEGDIGLFQLVNKHSFSFTKLQNNSLPPEKETAATGNPFFE------------- 211

Query: 182 NIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCL 241
           NIPLKFAN+YFSPEM SADLQVGNKKWNV+LKQYE         GTF GE+GLKDGDKCL
Sbjct: 212 NIPLKFANEYFSPEMQSADLQVGNKKWNVILKQYEDSQVVG---GTFRGESGLKDGDKCL 271

Query: 242 FEMVNTEHCVFKVSFSRNV 261
           FEMVNTE CVFKVSFSRNV
Sbjct: 272 FEMVNTEQCVFKVSFSRNV 274

[Close]
BLAST of CsGy6G027170 vs. TrEMBL
Match: tr|A0A1S3B1C1|A0A1S3B1C1_CUCME (uncharacterized protein LOC103484739 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484739 PE=4 SV=1)

HSP 1 Score: 395.6 bits (1015), Expect = 8.7e-107
Identity = 205/285 (71.93%), Postives = 221/285 (77.54%), Query Frame = 0 

Query: 2   EEECKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQS 61
           EEEC YIFREIP CK+R+IPKHE KVSRK+QPSP+KVETVQRFSSKSD +PSF+VVMRQS
Sbjct: 32  EEECNYIFREIPSCKKRLIPKHEIKVSRKKQPSPKKVETVQRFSSKSDHQPSFKVVMRQS 91

Query: 62  NVQGRFNM--------------------------VIPYDFAVKCLSEEVGTIELQTTNGR 121
           NVQGRFNM                          VIPYDFAVK LSEE+GTI+LQTT+ R
Sbjct: 92  NVQGRFNMVSPSCFINPPLNSLFDLLIYFSFVLEVIPYDFAVKYLSEEIGTIKLQTTDCR 151

Query: 122 SWQILYKWRRTDRAAYAYISSGWKHFAEDNRLKEGDIGLFQLINKHIFLFTKLQNNSLPA 181
           +WQ+LYKW RTDRA YAYISSGWKHFAEDNRLKEGDIGLFQL+NKH F FTKLQNNSLP 
Sbjct: 152 NWQLLYKWCRTDRATYAYISSGWKHFAEDNRLKEGDIGLFQLVNKHSFSFTKLQNNSLPP 211

Query: 182 DGETAATENPFFEVNISSKSYENSFLNIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQY 241
           + ETAAT NPFFE             NIPLKFAN+YFSPEM SADLQVGNKKWNV+LKQY
Sbjct: 212 EKETAATGNPFFE-------------NIPLKFANEYFSPEMQSADLQVGNKKWNVILKQY 271

Query: 242 ESYVRFSSGWGTFLGENGLKDGDKCLFEMVNTEHCVFKVSFSRNV 261
           E         GTF GE+GLKDGDKCLFEMVNTE CVFKVSFSRNV
Sbjct: 272 EDSQVVG---GTFRGESGLKDGDKCLFEMVNTEQCVFKVSFSRNV 300

[Close]
BLAST of CsGy6G027170 vs. TrEMBL
Match: tr|A0A0A0KJE0|A0A0A0KJE0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G489980 PE=4 SV=1)

HSP 1 Score: 387.9 bits (995), Expect = 1.8e-104
Identity = 190/260 (73.08%), Postives = 215/260 (82.69%), Query Frame = 0 

Query: 2   EEECKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQS 61
           EEEC  + RE P CK+RV+PKHE K SRK+Q SP KVET QRFSSKSD KPSF+VVMR++
Sbjct: 179 EEECNNVSRETPSCKKRVVPKHEVKASRKKQQSPRKVETTQRFSSKSDHKPSFKVVMRRN 238

Query: 62  NVQGRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHF 121
           NVQGRFNMVIP+DFAVK LSEE GTI LQ TNGR+WQ+LYKW RTDRA +AYISSGWKHF
Sbjct: 239 NVQGRFNMVIPHDFAVKYLSEESGTINLQITNGRNWQLLYKWCRTDRATFAYISSGWKHF 298

Query: 122 AEDNRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFL 181
            E NRLKEGDIGLFQLINKH  LFT+LQNNSL    +TA T NPFFEV+I SKSY NS+L
Sbjct: 299 VEKNRLKEGDIGLFQLINKHNMLFTELQNNSLSPKKKTATTGNPFFEVDIVSKSYMNSYL 358

Query: 182 NIPLKFANKYFSPEMHSADLQVGNKKWNVMLKQYE-SYVRFSSGWGTFLGENGLKDGDKC 241
           NIP +FA  YFSP+M SA LQVGNKKW+V +K+Y  S+VRF++GWGTF  ENGL+DGD C
Sbjct: 359 NIPRRFAGAYFSPKMQSASLQVGNKKWDVSIKKYACSHVRFAAGWGTFHSENGLEDGDTC 418

Query: 242 LFEMVNTEHCVFKVSFSRNV 261
           LFEMVNT+ CV KVS  R V
Sbjct: 419 LFEMVNTKLCVLKVSIFRKV 438

[Close]
BLAST of CsGy6G027170 vs. TrEMBL
Match: tr|A0A1S3B0K5|A0A1S3B0K5_CUCME (B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=LOC103484740 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 4.0e-104
Identity = 191/256 (74.61%), Postives = 212/256 (82.81%), Query Frame = 0 

Query: 5   CKYIFREIPRCKERVIPKHEAKVSRKEQPSPEKVETVQRFSSKSDRKPSFEVVMRQSNVQ 64
           C +I RE    K+RVIPKHE KVSRK+Q SP KVET QRFSSKSD KPSF+VVMR+SNVQ
Sbjct: 253 CNHISRETQSRKKRVIPKHEVKVSRKKQQSPRKVETTQRFSSKSDHKPSFKVVMRRSNVQ 312

Query: 65  GRFNMVIPYDFAVKCLSEEVGTIELQTTNGRSWQILYKWRRTDRAAYAYISSGWKHFAED 124
           GRF MVIPYDFAVK LSEE GTI LQTTNGR+WQ+LYKWRRTDRA +AYISSGWK F E 
Sbjct: 313 GRFIMVIPYDFAVKYLSEEFGTINLQTTNGRNWQLLYKWRRTDRATFAYISSGWKQFVEK 372

Query: 125 NRLKEGDIGLFQLINKHIFLFTKLQNNSLPADGETAATENPFFEVNISSKSYENSFLNIP 184
           NRLK+GD+GLFQL++KH  LFTKLQN+SL    ETA T NPFFEV+I SKSY  SFLNIP
Sbjct: 373 NRLKQGDVGLFQLVSKHRILFTKLQNDSLSTKKETATTGNPFFEVDIVSKSYMFSFLNIP 432

Query: 185 LKFANKYFSPEMHSADLQVGNKKWNVMLKQYESYVRFSSGWGTFLGENGLKDGDKCLFEM 244
            +FA  YFSP+M SA LQVGNKKW+V LKQYES  RFSSGWGTF  ENGL+DGD CLFEM
Sbjct: 433 TRFARTYFSPKMQSASLQVGNKKWDVALKQYESRARFSSGWGTFRVENGLEDGDTCLFEM 492

Query: 245 VNTEHCVFKVSFSRNV 261
           VNT+ CVF+VS  +NV
Sbjct: 493 VNTKLCVFEVSIFKNV 508

The following BLAST results are available for this feature:
BLAST of CsGy6G027170 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004142019.21.7e-146100.00PREDICTED: B3 domain-containing transcription factor VRN1 [Cucumis sativus] >KGN... [more]
XP_008440217.16.7e-11179.15PREDICTED: B3 domain-containing protein Os12g0591400-like isoform X2 [Cucumis me... [more]
XP_008440216.11.3e-10671.93PREDICTED: uncharacterized protein LOC103484739 isoform X1 [Cucumis melo][more]
XP_004142020.22.7e-10473.08PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X1 [Cucum... [more]
XP_011657839.12.7e-10473.08PREDICTED: B3 domain-containing transcription factor VRN1-like isoform X2 [Cucum... [more]
BLAST of CsGy6G027170 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G49480.12.8e-1034.31related to vernalization1 1[more]
AT3G18990.12.8e-1035.29AP2/B3-like transcriptional factor family protein[more]
AT5G58280.13.8e-0731.88AP2/B3-like transcriptional factor family protein[more]
AT4G31690.13.2e-0622.90Transcriptional factor B3 family protein[more]
AT4G33280.19.3e-0631.40AP2/B3-like transcriptional factor family protein[more]
BLAST of CsGy6G027170 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9XIB5|REM19_ARATH5.1e-0934.31B3 domain-containing protein REM19 OS=Arabidopsis thaliana OX=3702 GN=REM19 PE=1... [more]
sp|Q8L3W1|VRN1_ARATH5.1e-0935.29B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana OX=3702 G... [more]
sp|Q9FHB2|Y5828_ARATH6.8e-0631.88Putative B3 domain-containing protein At5g58280 OS=Arabidopsis thaliana OX=3702 ... [more]
sp|Q851W5|Y3204_ORYSJ1.2e-0532.48B3 domain-containing protein Os03g0620400 OS=Oryza sativa subsp. japonica OX=399... [more]
sp|Q851V5|Y3216_ORYSJ2.0e-0529.27Putative B3 domain-containing protein Os03g0621600 OS=Oryza sativa subsp. japoni... [more]
BLAST of CsGy6G027170 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KG44|A0A0A0KG44_CUCSA1.1e-146100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G489990 PE=4 SV=1[more]
tr|A0A1S3B070|A0A1S3B070_CUCME4.5e-11179.15B3 domain-containing protein Os12g0591400-like isoform X2 OS=Cucumis melo OX=365... [more]
tr|A0A1S3B1C1|A0A1S3B1C1_CUCME8.7e-10771.93uncharacterized protein LOC103484739 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A0A0KJE0|A0A0A0KJE0_CUCSA1.8e-10473.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G489980 PE=4 SV=1[more]
tr|A0A1S3B0K5|A0A1S3B0K5_CUCME4.0e-10474.61B3 domain-containing transcription factor VRN1-like OS=Cucumis melo OX=3656 GN=L... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR015300DNA-bd_pseudobarrel_sf
IPR003340B3_DNA-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005634 nucleus
molecular_function GO:0003677 DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G027170.1CsGy6G027170.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003340B3 DNA binding domainSMARTSM01019B3_2coord: 54..151
e-value: 9.1E-16
score: 68.4
coord: 166..260
e-value: 1.4E-9
score: 47.8
IPR003340B3 DNA binding domainPFAMPF02362B3coord: 166..255
e-value: 1.5E-12
score: 47.2
coord: 54..141
e-value: 2.3E-18
score: 65.8
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 166..260
score: 12.985
IPR003340B3 DNA binding domainPROSITEPS50863B3coord: 54..151
score: 14.706
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 52..140
e-value: 1.37869E-17
score: 74.2865
IPR003340B3 DNA binding domainCDDcd10017B3_DNAcoord: 166..258
e-value: 9.10256E-14
score: 63.8861
IPR015300DNA-binding pseudobarrel domain superfamilyGENE3DG3DSA:2.40.330.10coord: 33..147
e-value: 6.5E-27
score: 95.6
coord: 148..259
e-value: 5.2E-24
score: 86.3
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILYSSF101936DNA-binding pseudobarrel domaincoord: 162..255
IPR015300DNA-binding pseudobarrel domain superfamilySUPERFAMILYSSF101936DNA-binding pseudobarrel domaincoord: 49..148
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..43
NoneNo IPR availablePANTHERPTHR31920FAMILY NOT NAMEDcoord: 158..259
NoneNo IPR availablePANTHERPTHR31920:SF22B3 DOMAIN-CONTAINING PROTEIN REM19-RELATEDcoord: 24..144
NoneNo IPR availablePANTHERPTHR31920FAMILY NOT NAMEDcoord: 24..144
NoneNo IPR availablePANTHERPTHR31920:SF22B3 DOMAIN-CONTAINING PROTEIN REM19-RELATEDcoord: 158..259

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G027170Watermelon (97103) v2cgybwmbB394
CsGy6G027170Watermelon (97103) v2cgybwmbB471
CsGy6G027170Watermelon (97103) v2cgybwmbB488
CsGy6G027170Wax gourdcgybwgoB557
CsGy6G027170Wax gourdcgybwgoB576
CsGy6G027170Wax gourdcgybwgoB600
CsGy6G027170Cucumber (Gy14) v2cgybcgybB067
CsGy6G027170Cucumber (Gy14) v2cgybcgybB069
CsGy6G027170Cucurbita maxima (Rimu)cgybcmaB831
CsGy6G027170Cucurbita maxima (Rimu)cgybcmaB848
CsGy6G027170Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G027170Cucurbita moschata (Rifu)cgybcmoB811
CsGy6G027170Cucurbita moschata (Rifu)cgybcmoB832
CsGy6G027170Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G027170Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G027170Cucurbita pepo (Zucchini)cgybcpeB719
CsGy6G027170Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G027170Cucurbita pepo (Zucchini)cgybcpeB868
CsGy6G027170Cucumber (Chinese Long) v2cgybcuB252
CsGy6G027170Cucumber (Chinese Long) v2cgybcuB253
CsGy6G027170Cucumber (Chinese Long) v2cgybcuB281
CsGy6G027170Bottle gourd (USVL1VR-Ls)cgyblsiB388
CsGy6G027170Bottle gourd (USVL1VR-Ls)cgyblsiB389
CsGy6G027170Bottle gourd (USVL1VR-Ls)cgyblsiB398
CsGy6G027170Bottle gourd (USVL1VR-Ls)cgyblsiB422
CsGy6G027170Melon (DHL92) v3.5.1cgybmeB377
CsGy6G027170Melon (DHL92) v3.5.1cgybmeB414
CsGy6G027170Melon (DHL92) v3.5.1cgybmeB444
CsGy6G027170Melon (DHL92) v3.6.1cgybmedB412
CsGy6G027170Melon (DHL92) v3.6.1cgybmedB440
CsGy6G027170Watermelon (Charleston Gray)cgybwcgB399
CsGy6G027170Watermelon (Charleston Gray)cgybwcgB390
CsGy6G027170Watermelon (Charleston Gray)cgybwcgB418
CsGy6G027170Watermelon (97103) v1cgybwmB495
CsGy6G027170Watermelon (Charleston Gray)cgybwcgB464
CsGy6G027170Watermelon (97103) v1cgybwmB420
CsGy6G027170Watermelon (97103) v1cgybwmB435
CsGy6G027170Watermelon (97103) v1cgybwmB468
CsGy6G027170Wild cucumber (PI 183967)cgybcpiB260
CsGy6G027170Wild cucumber (PI 183967)cgybcpiB261
CsGy6G027170Wild cucumber (PI 183967)cgybcpiB287
CsGy6G027170Silver-seed gourdcarcgybB0198
CsGy6G027170Silver-seed gourdcarcgybB0418
CsGy6G027170Silver-seed gourdcarcgybB0799
CsGy6G027170Cucumber (Chinese Long) v3cgybcucB264
CsGy6G027170Cucumber (Chinese Long) v3cgybcucB265
CsGy6G027170Cucumber (Chinese Long) v3cgybcucB298