CsGy6G026580 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: CDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTGTGGTGGTGATTCTAAGTTCTTGAAAGACACGGTTTTAAATTCTAAGTTCAGCTCTTTCTTGGTTTCTCTTTTGCCTTTCAAACAATCCAATTGTGGAAGCAAAGATAAGAGAAGAACTCGAAACAAACGATTCCATTATCAAATGACGAGAACTACACGTGATCAATGCCATATATTTTCCTATGAAGAGTTGAAGAAGCTTCCATCAGGTCATCATGTAGATCCCAAAACAAAGATTGTGTTTTCATTATATGCACCGGGAAGAATGAGTGATGTGTGGGGGAGAAGATTTTGCATGGAGTCTAAGCTAGAGAGATGGATTAATTCAGAAAATGAAAAGATCAAACACGTGCCATCTTATAAACTCTTGACATTTTATGCAGGGCCAAGGACTTATACGATACTTTGCATGTTTGTTTGTTGGTTTCATAATGATGTGATCCATAAATTTGATCAAGGAGAATTATAG ATGATTGTGGTGTTCTTGAAAGACACGGTTTTAAATTCTAAGTTCAGCTCTTTCTTGGTTTCTCTTTTGCCTTTCAAACAATCCAATTGTGGAAGCAAAGATAAGAGAAGAACTCGAAACAAACGATTCCATTATCAAATGACGAGAACTACACGTGATCAATGCCATATATTTTCCTATGAAGAGTTGAAGAAGCTTCCATCAGGTCATCATGTAGATCCCAAAACAAAGATTGTGTTTTCATTATATGCACCGGGAAGAATGAGTGATGTGTGGGGGAGAAGATTTTGCATGGAGTCTAAGCTAGAGAGATGGATTAATTCAGAAAATGAAAAGATCAAACACGTGCCATCTTATAAACTCTTGACATTTTATGCAGGGCCAAGGACTTATACGATACTTTGCATGTTTGTTTGTTGGTTTCATAATGATGTGATCCATAAATTTGATCAAGGAGAATTATAG ATGATTGTGGTGTTCTTGAAAGACACGGTTTTAAATTCTAAGTTCAGCTCTTTCTTGGTTTCTCTTTTGCCTTTCAAACAATCCAATTGTGGAAGCAAAGATAAGAGAAGAACTCGAAACAAACGATTCCATTATCAAATGACGAGAACTACACGTGATCAATGCCATATATTTTCCTATGAAGAGTTGAAGAAGCTTCCATCAGGTCATCATGTAGATCCCAAAACAAAGATTGTGTTTTCATTATATGCACCGGGAAGAATGAGTGATGTGTGGGGGAGAAGATTTTGCATGGAGTCTAAGCTAGAGAGATGGATTAATTCAGAAAATGAAAAGATCAAACACGTGCCATCTTATAAACTCTTGACATTTTATGCAGGGCCAAGGACTTATACGATACTTTGCATGTTTGTTTGTTGGTTTCATAATGATGTGATCCATAAATTTGATCAAGGAGAATTATAG MIVVFLKDTVLNSKFSSFLVSLLPFKQSNCGSKDKRRTRNKRFHYQMTRTTRDQCHIFSYEELKKLPSGHHVDPKTKIVFSLYAPGRMSDVWGRRFCMESKLERWINSENEKIKHVPSYKLLTFYAGPRTYTILCMFVCWFHNDVIHKFDQGEL
BLAST of CsGy6G026580 vs. NCBI nr
Match: XP_008441106.2 (PREDICTED: alkane hydroxylase MAH1-like [Cucumis melo]) HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23 Identity = 79/163 (48.47%), Postives = 84/163 (51.53%), Query Frame = 0
BLAST of CsGy6G026580 vs. NCBI nr
Match: XP_011658477.1 (PREDICTED: alkane hydroxylase MAH1-like [Cucumis sativus] >KGN48433.1 hypothetical protein Csa_6G487540 [Cucumis sativus]) HSP 1 Score: 109.8 bits (273), Expect = 8.5e-21 Identity = 51/65 (78.46%), Postives = 55/65 (84.62%), Query Frame = 0
BLAST of CsGy6G026580 vs. NCBI nr
Match: XP_008440138.1 (PREDICTED: alkane hydroxylase MAH1-like [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20 Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
BLAST of CsGy6G026580 vs. NCBI nr
Match: XP_011657793.1 (PREDICTED: alkane hydroxylase MAH1-like [Cucumis sativus] >KGN48432.1 hypothetical protein Csa_6G487530 [Cucumis sativus]) HSP 1 Score: 108.6 bits (270), Expect = 1.9e-20 Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
BLAST of CsGy6G026580 vs. NCBI nr
Match: XP_016899223.1 (PREDICTED: alkane hydroxylase MAH1-like [Cucumis melo]) HSP 1 Score: 107.1 bits (266), Expect = 5.5e-20 Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0
BLAST of CsGy6G026580 vs. TAIR10
Match: AT2G23180.1 (cytochrome P450, family 96, subfamily A, polypeptide 1) HSP 1 Score: 77.4 bits (189), Expect = 8.5e-15 Identity = 39/65 (60.00%), Postives = 46/65 (70.77%), Query Frame = 0
BLAST of CsGy6G026580 vs. TAIR10
Match: AT4G32170.1 (cytochrome P450, family 96, subfamily A, polypeptide 2) HSP 1 Score: 75.1 bits (183), Expect = 4.2e-14 Identity = 39/65 (60.00%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CsGy6G026580 vs. TAIR10
Match: AT4G39490.1 (cytochrome P450, family 96, subfamily A, polypeptide 10) HSP 1 Score: 74.3 bits (181), Expect = 7.2e-14 Identity = 38/65 (58.46%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CsGy6G026580 vs. TAIR10
Match: AT2G21910.1 (cytochrome P450, family 96, subfamily A, polypeptide 5) HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13 Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 0
BLAST of CsGy6G026580 vs. TAIR10
Match: AT1G65340.1 (cytochrome P450, family 96, subfamily A, polypeptide 3) HSP 1 Score: 73.2 bits (178), Expect = 1.6e-13 Identity = 37/64 (57.81%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CsGy6G026580 vs. Swiss-Prot
Match: sp|Q9FVS9|C96AF_ARATH (Alkane hydroxylase MAH1 OS=Arabidopsis thaliana OX=3702 GN=CYP96A15 PE=2 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 3.8e-12 Identity = 35/65 (53.85%), Postives = 44/65 (67.69%), Query Frame = 0
BLAST of CsGy6G026580 vs. Swiss-Prot
Match: sp|A0A140IL90|C96T1_NARAP (Noroxomaritidine synthase OS=Narcissus aff. pseudonarcissus MK-2014 OX=1540222 GN=Cyp96T1 PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10 Identity = 34/64 (53.12%), Postives = 39/64 (60.94%), Query Frame = 0
BLAST of CsGy6G026580 vs. Swiss-Prot
Match: sp|Q9FMY1|C86B1_ARATH (Cytochrome P450 86B1 OS=Arabidopsis thaliana OX=3702 GN=CYP86B1 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.3e-04 Identity = 21/63 (33.33%), Postives = 35/63 (55.56%), Query Frame = 0
BLAST of CsGy6G026580 vs. TrEMBL
Match: tr|A0A1S3B2P0|A0A1S3B2P0_CUCME (alkane hydroxylase MAH1-like OS=Cucumis melo OX=3656 GN=LOC103485332 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 9.3e-24 Identity = 79/163 (48.47%), Postives = 84/163 (51.53%), Query Frame = 0
BLAST of CsGy6G026580 vs. TrEMBL
Match: tr|A0A0A0KFY4|A0A0A0KFY4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487540 PE=3 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 5.6e-21 Identity = 51/65 (78.46%), Postives = 55/65 (84.62%), Query Frame = 0
BLAST of CsGy6G026580 vs. TrEMBL
Match: tr|A0A1S3B0F5|A0A1S3B0F5_CUCME (alkane hydroxylase MAH1-like OS=Cucumis melo OX=3656 GN=LOC103484695 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20 Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
BLAST of CsGy6G026580 vs. TrEMBL
Match: tr|A0A0A0KJ78|A0A0A0KJ78_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487530 PE=3 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20 Identity = 50/65 (76.92%), Postives = 55/65 (84.62%), Query Frame = 0
BLAST of CsGy6G026580 vs. TrEMBL
Match: tr|A0A1S4DTD8|A0A1S4DTD8_CUCME (alkane hydroxylase MAH1-like OS=Cucumis melo OX=3656 GN=LOC107990335 PE=3 SV=1) HSP 1 Score: 107.1 bits (266), Expect = 3.7e-20 Identity = 49/65 (75.38%), Postives = 54/65 (83.08%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |