CsGy6G024830 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTACTCACAAAAGCTACTCTTTTCTCTCTTCACTGTCTTCCTTCTCTCAGGTACTACGTTGTTCTTTTTTTATTCTTTCCAATCTTTTCTTCAAGTTTTTCTCATTTTTTTTATTATCCTTCTCTTCGTTATTAATGTAGTGCATGTGGGTATTTGGTATCAGAGCAAGGATCAGGCGGTCACAATGATAATCTCCTCCGTGAATTCCAGCCAAAGAAGTTGTATGTGTTTGGAGACTCATATGTTGACACAGGAAACATCGGTATATCAAACTTCAGCTCTCGAAAGTTTCCTTATGGCATAACCTTTCCCGGCAAACCTTCTGGCCGTTTCTCCGATGGCCGTGTTTTGACCGATTACGTAGGTAAAAACATGCAACTTGTTTGTTTGTGTTGTTGAAAAGTGAAAACAAATGCAGTGTTGGTAATTTTTTTAAAGACAAATATTTTGTTTTTCCTGATATTAGGAGGTTGAGTGTACCGTACACGTTGCAATAAAGTAGATTGGTAGTTCGACTTCGTTCAATCCATGAAAATGAGAAGCCATGACGTTTGAACCATAACTAATAAACATATTCATTTGTACTTTAACTCCCCTTTCCACTCTTTATATAGTTACTGTTTTCTCCTCTCTTTTTTATTATTTTCATTTTTCGGGATGGATAGTAATTACCAAGTGTCATTTTAGCAAATATAAATATATATATTTATATGCTTTTAATATTTTCAAGATAACAATTTGATGAGAATGGTAAGGAGGCTTCAACCTGCGTCTACTAATTAG ATGGAGTACTCACAAAAGCTACTCTTTTCTCTCTTCACTGTCTTCCTTCTCTCAGAGCAAGGATCAGGCGGTCACAATGATAATCTCCTCCGTGAATTCCAGCCAAAGAAGTTGTATGTGTTTGGAGACTCATATGTTGACACAGGAAACATCGGTATATCAAACTTCAGCTCTCGAAAGTTTCCTTATGGCATAACCTTTCCCGGCAAACCTTCTGGCCGTTTCTCCGATGGCCGTGTTTTGACCGATTACGTAGATAACAATTTGATGAGAATGGTAAGGAGGCTTCAACCTGCGTCTACTAATTAG ATGGAGTACTCACAAAAGCTACTCTTTTCTCTCTTCACTGTCTTCCTTCTCTCAGAGCAAGGATCAGGCGGTCACAATGATAATCTCCTCCGTGAATTCCAGCCAAAGAAGTTGTATGTGTTTGGAGACTCATATGTTGACACAGGAAACATCGGTATATCAAACTTCAGCTCTCGAAAGTTTCCTTATGGCATAACCTTTCCCGGCAAACCTTCTGGCCGTTTCTCCGATGGCCGTGTTTTGACCGATTACGTAGATAACAATTTGATGAGAATGGTAAGGAGGCTTCAACCTGCGTCTACTAATTAG MEYSQKLLFSLFTVFLLSEQGSGGHNDNLLREFQPKKLYVFGDSYVDTGNIGISNFSSRKFPYGITFPGKPSGRFSDGRVLTDYVDNNLMRMVRRLQPASTN
BLAST of CsGy6G024830 vs. NCBI nr
Match: XP_004143381.1 (PREDICTED: GDSL esterase/lipase At5g03610 [Cucumis sativus] >KGN48253.1 hypothetical protein Csa_6G452050 [Cucumis sativus]) HSP 1 Score: 179.5 bits (454), Expect = 5.8e-42 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy6G024830 vs. NCBI nr
Match: XP_008462556.1 (PREDICTED: GDSL esterase/lipase At5g03610-like [Cucumis melo]) HSP 1 Score: 156.8 bits (395), Expect = 4.0e-35 Identity = 74/82 (90.24%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of CsGy6G024830 vs. NCBI nr
Match: XP_023518578.1 (GDSL esterase/lipase At5g03610-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 108.2 bits (269), Expect = 1.6e-20 Identity = 57/89 (64.04%), Postives = 64/89 (71.91%), Query Frame = 0
BLAST of CsGy6G024830 vs. NCBI nr
Match: XP_011657693.1 (PREDICTED: GDSL esterase/lipase At5g03610 [Cucumis sativus] >KGN48252.1 hypothetical protein Csa_6G452040 [Cucumis sativus]) HSP 1 Score: 103.6 bits (257), Expect = 4.1e-19 Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of CsGy6G024830 vs. NCBI nr
Match: XP_022972691.1 (GDSL esterase/lipase At5g03610-like [Cucurbita maxima]) HSP 1 Score: 102.8 bits (255), Expect = 6.9e-19 Identity = 51/82 (62.20%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of CsGy6G024830 vs. TAIR10
Match: AT5G03610.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 93.2 bits (230), Expect = 9.9e-20 Identity = 52/86 (60.47%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of CsGy6G024830 vs. TAIR10
Match: AT3G09930.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 87.8 bits (216), Expect = 4.2e-18 Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of CsGy6G024830 vs. TAIR10
Match: AT2G36325.1 (GDSL-like Lipase/Acylhydrolase superfamily protein) HSP 1 Score: 77.0 bits (188), Expect = 7.4e-15 Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CsGy6G024830 vs. TAIR10
Match: AT5G03600.1 (SGNH hydrolase-type esterase superfamily protein) HSP 1 Score: 70.1 bits (170), Expect = 9.0e-13 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CsGy6G024830 vs. TAIR10
Match: AT1G75930.1 (extracellular lipase 6) HSP 1 Score: 55.8 bits (133), Expect = 1.8e-08 Identity = 34/95 (35.79%), Postives = 51/95 (53.68%), Query Frame = 0
BLAST of CsGy6G024830 vs. Swiss-Prot
Match: sp|Q9LZS7|GDL71_ARATH (GDSL esterase/lipase At5g03610 OS=Arabidopsis thaliana OX=3702 GN=At5g03610 PE=2 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 1.8e-18 Identity = 52/86 (60.47%), Postives = 58/86 (67.44%), Query Frame = 0
BLAST of CsGy6G024830 vs. Swiss-Prot
Match: sp|Q9SF94|GDL50_ARATH (GDSL esterase/lipase At3g09930 OS=Arabidopsis thaliana OX=3702 GN=At3g09930 PE=2 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 7.5e-17 Identity = 44/78 (56.41%), Postives = 54/78 (69.23%), Query Frame = 0
BLAST of CsGy6G024830 vs. Swiss-Prot
Match: sp|Q8RWJ4|GDL45_ARATH (GDSL esterase/lipase At2g36325 OS=Arabidopsis thaliana OX=3702 GN=At2g36325 PE=2 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-13 Identity = 35/53 (66.04%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of CsGy6G024830 vs. Swiss-Prot
Match: sp|Q9LZS9|GDL69_ARATH (GDSL esterase/lipase At5g03590 OS=Arabidopsis thaliana OX=3702 GN=At5g03590 PE=3 SV=2) HSP 1 Score: 77.0 bits (188), Expect = 1.3e-13 Identity = 44/89 (49.44%), Postives = 54/89 (60.67%), Query Frame = 0
BLAST of CsGy6G024830 vs. Swiss-Prot
Match: sp|Q9LZS8|GDL70_ARATH (GDSL esterase/lipase At5g03600 OS=Arabidopsis thaliana OX=3702 GN=At5g03600 PE=3 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.6e-11 Identity = 33/64 (51.56%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CsGy6G024830 vs. TrEMBL
Match: tr|A0A0A0KFB6|A0A0A0KFB6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452050 PE=4 SV=1) HSP 1 Score: 179.5 bits (454), Expect = 3.8e-42 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsGy6G024830 vs. TrEMBL
Match: tr|A0A1S3CHQ7|A0A1S3CHQ7_CUCME (GDSL esterase/lipase At5g03610-like OS=Cucumis melo OX=3656 GN=LOC103500888 PE=4 SV=1) HSP 1 Score: 156.8 bits (395), Expect = 2.7e-35 Identity = 74/82 (90.24%), Postives = 79/82 (96.34%), Query Frame = 0
BLAST of CsGy6G024830 vs. TrEMBL
Match: tr|A0A0A0KIM6|A0A0A0KIM6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452040 PE=4 SV=1) HSP 1 Score: 103.6 bits (257), Expect = 2.7e-19 Identity = 49/84 (58.33%), Postives = 59/84 (70.24%), Query Frame = 0
BLAST of CsGy6G024830 vs. TrEMBL
Match: tr|A0A1S3CH96|A0A1S3CH96_CUCME (GDSL esterase/lipase At5g03610-like OS=Cucumis melo OX=3656 GN=LOC103500885 PE=4 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.0e-18 Identity = 48/87 (55.17%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of CsGy6G024830 vs. TrEMBL
Match: tr|A0A061ET46|A0A061ET46_THECC (GDSL-like Lipase/Acylhydrolase superfamily protein, putative isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_022526 PE=3 SV=1) HSP 1 Score: 99.0 bits (245), Expect = 6.6e-18 Identity = 55/87 (63.22%), Postives = 61/87 (70.11%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |