CsGy6G023930 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G023930
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 23922402 .. 23922841 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGCCCTCGTAGCTGAGTGGGACAAAGTATGGCTTGACTCAGTCCCACTTTCAGAAATCCCAGCATTTAAGAATCTAATAAGCTCCTTTTGGAGGGCCCCACCTTGTTTGGTTCTTCTATGGGATGTAGCACCAAATCCAGTAGTGATGCCATAACTATCAGTTCCTTTATTTAAACTCTCCATAATCCAATCACTACTAGCTTTAACACCAACTCTAGTAGACTCTGAAAGCTCAACAATAACATCAGAATTCCTAGTAGCGATAGCAGCAACTTGAGAGACAGTGAGTGTCTCACCATCAAGCTTGACAAGGGTCCTTTGATACTCCTCTACCATGCGCTTCACCTCATCAAAATGGCTTCCCTTGAGGGAATCAGCAGCCACACCCCAATTGAGTGGGTCATGAATGGAGCTCTTGGAAATGGTCTCGACTAG

mRNA sequence

ATGGCTGCCCTCGTAGCTGAGTGGGACAAAGTATGGCTTGACTCAGTCCCACTTTCAGAAATCCCAGCATTTAAGAATCTAATAAGCTCCTTTTGGAGGGCCCCACCTTGTTTGGTTCTTCTATGGGATGTAGCACCAAATCCAGTACTCAACAATAACATCAGAATTCCTAGTAGCGATAGCAGCAACTTGAGAGACAGTGAGTGTCTCACCATCAAGCTTGACAAGGGTCCTTTGATACTCCTCTACCATGCGCTTCACCTCATCAAAATGGCTTCCCTTGAGGGAATCAGCAGCCACACCCCAATTGAGTGGGTCATGAATGGAGCTCTTGGAAATGGTCTCGACTAG

Coding sequence (CDS)

ATGGCTGCCCTCGTAGCTGAGTGGGACAAAGTATGGCTTGACTCAGTCCCACTTTCAGAAATCCCAGCATTTAAGAATCTAATAAGCTCCTTTTGGAGGGCCCCACCTTGTTTGGTTCTTCTATGGGATGTAGCACCAAATCCAGTACTCAACAATAACATCAGAATTCCTAGTAGCGATAGCAGCAACTTGAGAGACAGTGAGTGTCTCACCATCAAGCTTGACAAGGGTCCTTTGATACTCCTCTACCATGCGCTTCACCTCATCAAAATGGCTTCCCTTGAGGGAATCAGCAGCCACACCCCAATTGAGTGGGTCATGAATGGAGCTCTTGGAAATGGTCTCGACTAG

Protein sequence

MAALVAEWDKVWLDSVPLSEIPAFKNLISSFWRAPPCLVLLWDVAPNPVLNNNIRIPSSDSSNLRDSECLTIKLDKGPLILLYHALHLIKMASLEGISSHTPIEWVMNGALGNGLD
Homology
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BLAST of CsGy6G023930 vs. TrEMBL
Match: tr|A0A0A9KFB6|A0A0A9KFB6_ARUDO (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1)

HSP 1 Score: 57.8 bits (138), Expect = 1.9e-05
Identity = 27/50 (54.00%), Postives = 34/50 (68.00%), Query Frame = 0 

Query: 1  MAALVAEWDKVWLDSVPLSEIPAFKNLISSFWRAPPCLVLLWDVAPNPVL 51
          +AA VA   + W  SVP+ + PAF+NL+SS W APP  V  WDVAP PV+
Sbjct: 5  IAARVASAGRTW-PSVPVPKAPAFRNLMSSLWSAPPSFVRRWDVAPKPVV 53

The following BLAST results are available for this feature:
BLAST of CsGy6G023930 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsGy6G023930 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G023930 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G023930 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A9KFB6|A0A0A9KFB6_ARUDO1.9e-0554.00Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G023930.1CsGy6G023930.1mRNA


Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G023930Lsi01G013270Bottle gourd (USVL1VR-Ls)cgyblsiB398
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G023930Cucumber (Chinese Long) v3cgybcucB268
CsGy6G023930Cucumber (Chinese Long) v3cgybcucB298
CsGy6G023930Cucumber (Chinese Long) v3cgybcucB300
CsGy6G023930Watermelon (97103) v2cgybwmbB398
CsGy6G023930Watermelon (97103) v2cgybwmbB414
CsGy6G023930Watermelon (97103) v2cgybwmbB431
CsGy6G023930Wax gourdcgybwgoB504
CsGy6G023930Wax gourdcgybwgoB599
CsGy6G023930Cucumber (Gy14) v2cgybcgybB100
CsGy6G023930Cucumber (Gy14) v2cgybcgybB151
CsGy6G023930Cucurbita maxima (Rimu)cgybcmaB729
CsGy6G023930Cucurbita maxima (Rimu)cgybcmaB795
CsGy6G023930Cucurbita maxima (Rimu)cgybcmaB831
CsGy6G023930Cucurbita maxima (Rimu)cgybcmaB854
CsGy6G023930Cucurbita maxima (Rimu)cgybcmaB861
CsGy6G023930Cucurbita moschata (Rifu)cgybcmoB712
CsGy6G023930Cucurbita moschata (Rifu)cgybcmoB773
CsGy6G023930Cucurbita moschata (Rifu)cgybcmoB811
CsGy6G023930Cucurbita moschata (Rifu)cgybcmoB836
CsGy6G023930Cucurbita moschata (Rifu)cgybcmoB843
CsGy6G023930Cucurbita pepo (Zucchini)cgybcpeB710
CsGy6G023930Cucurbita pepo (Zucchini)cgybcpeB773
CsGy6G023930Cucurbita pepo (Zucchini)cgybcpeB810
CsGy6G023930Cucurbita pepo (Zucchini)cgybcpeB826
CsGy6G023930Cucurbita pepo (Zucchini)cgybcpeB891
CsGy6G023930Cucumber (Chinese Long) v2cgybcuB254
CsGy6G023930Cucumber (Chinese Long) v2cgybcuB281
CsGy6G023930Cucumber (Chinese Long) v2cgybcuB283
CsGy6G023930Bottle gourd (USVL1VR-Ls)cgyblsiB384
CsGy6G023930Bottle gourd (USVL1VR-Ls)cgyblsiB413
CsGy6G023930Bottle gourd (USVL1VR-Ls)cgyblsiB451
CsGy6G023930Melon (DHL92) v3.5.1cgybmeB447
CsGy6G023930Melon (DHL92) v3.5.1cgybmeB426
CsGy6G023930Melon (DHL92) v3.6.1cgybmedB374
CsGy6G023930Melon (DHL92) v3.6.1cgybmedB420
CsGy6G023930Melon (DHL92) v3.6.1cgybmedB444
CsGy6G023930Watermelon (Charleston Gray)cgybwcgB392
CsGy6G023930Watermelon (Charleston Gray)cgybwcgB406
CsGy6G023930Watermelon (Charleston Gray)cgybwcgB426
CsGy6G023930Watermelon (97103) v1cgybwmB423
CsGy6G023930Watermelon (97103) v1cgybwmB437
CsGy6G023930Watermelon (97103) v1cgybwmB483
CsGy6G023930Watermelon (97103) v1cgybwmB472
CsGy6G023930Wild cucumber (PI 183967)cgybcpiB263
CsGy6G023930Wild cucumber (PI 183967)cgybcpiB287
CsGy6G023930Wild cucumber (PI 183967)cgybcpiB289
CsGy6G023930Silver-seed gourdcarcgybB0177
CsGy6G023930Silver-seed gourdcarcgybB0255