CsGy6G018620 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G018620
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Ankyrin repeat family protein
Location	Chr6 : 19352011 .. 19352589 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCAAGACAGAACAATAATGGAGCTGAATCAGTAGCAATAACAATAGACACAACAGACGATACAGGTCATGAGAAGAACAAGATGATGAACAACAATAATTGGATGAGAGAAGACACAGATTTCCTAATGGTAGTAACGACATTCATTGCAACCGTAGCATTTCAAATCGGGACGAACCCGCCGGGTGGCGTATGGCAAGAAGACGATAAACAGGGAAAGTACTTTGCTGGGAAATCCATAATGGCTACAAAATCTCCTTCTGATTTCATTGGATTTTTGGTAACAATTACAGCTTGCTTTGTGTTTTCAGCAATGCAATTCGCTGTTCTGTTCCTTAAGAAATGGCCAGTTGGTGCCAAAAATTGGTCATTTTCAAGGTTCATTCTTTATTCAACTATGGGATTGGCCGTTTCTTCCATGGGATTTGCTTATGGATGCTCTGTTAGAGCTTACACACCTGACTCAGAGGAAAATACTCTTTTTGTTATTTCTTTTATTACTATGTTGGGATTTCCTATTAGTTTGGCTGCCATTTCAATTTATTTACAATACTTTAGTAAATCTTCATCTTCTTAA

mRNA sequence

ATGTCAAGACAGAACAATAATGGAGCTGAATCAGTAGCAATAACAATAGACACAACAGACGATACAGGTCATGAGAAGAACAAGATGATGAACAACAATAATTGGATGAGAGAAGACACAGATTTCCTAATGGTAGTAACGACATTCATTGCAACCGTAGCATTTCAAATCGGGACGAACCCGCCGGGTGGCGTATGGCAAGAAGACGATAAACAGGGAAAGTACTTTGCTGGGAAATCCATAATGGCTACAAAATCTCCTTCTGATTTCATTGGATTTTTGGTAACAATTACAGCTTGCTTTGTGTTTTCAGCAATGCAATTCGCTGTTCTGTTCCTTAAGAAATGGCCAGTTGGTGCCAAAAATTGGTCATTTTCAAGGTTCATTCTTTATTCAACTATGGGATTGGCCGTTTCTTCCATGGGATTTGCTTATGGATGCTCTGTTAGAGCTTACACACCTGACTCAGAGGAAAATACTCTTTTTGTTATTTCTTTTATTACTATGTTGGGATTTCCTATTAGTTTGGCTGCCATTTCAATTTATTTACAATACTTTAGTAAATCTTCATCTTCTTAA

Coding sequence (CDS)

ATGTCAAGACAGAACAATAATGGAGCTGAATCAGTAGCAATAACAATAGACACAACAGACGATACAGGTCATGAGAAGAACAAGATGATGAACAACAATAATTGGATGAGAGAAGACACAGATTTCCTAATGGTAGTAACGACATTCATTGCAACCGTAGCATTTCAAATCGGGACGAACCCGCCGGGTGGCGTATGGCAAGAAGACGATAAACAGGGAAAGTACTTTGCTGGGAAATCCATAATGGCTACAAAATCTCCTTCTGATTTCATTGGATTTTTGGTAACAATTACAGCTTGCTTTGTGTTTTCAGCAATGCAATTCGCTGTTCTGTTCCTTAAGAAATGGCCAGTTGGTGCCAAAAATTGGTCATTTTCAAGGTTCATTCTTTATTCAACTATGGGATTGGCCGTTTCTTCCATGGGATTTGCTTATGGATGCTCTGTTAGAGCTTACACACCTGACTCAGAGGAAAATACTCTTTTTGTTATTTCTTTTATTACTATGTTGGGATTTCCTATTAGTTTGGCTGCCATTTCAATTTATTTACAATACTTTAGTAAATCTTCATCTTCTTAA

Protein sequence

MSRQNNNGAESVAITIDTTDDTGHEKNKMMNNNNWMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAISIYLQYFSKSSSS

Homology

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_011657373.1 (PREDICTED: uncharacterized protein LOC105435852 [Cucumis sativus] >KGN47597.1 hypothetical protein Csa_6G363530 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 1.7e-98
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMREDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180

Query: 181 IYLQYFSKSSSS 193
           IYLQYFSKSSSS
Sbjct: 181 IYLQYFSKSSSS 192

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_008445596.1 (PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo])

HSP 1 Score: 335.5 bits (859), Expect = 1.2e-88
Identity = 172/192 (89.58%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQ NNGAESVAITIDTT +TGHEKNKM     W+REDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQ-NNGAESVAITIDTT-ETGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDF G+LVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLA+SSMG AYGCSVRAYTPDSEE T +VISFITMLGFPI LAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAIS 180

Query: 181 IYLQYFSKSSSS 193
           +YL+YF+KSSSS
Sbjct: 181 LYLEYFNKSSSS 190

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_016899921.1 (PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo])

HSP 1 Score: 122.9 bits (307), Expect = 1.2e-24
Identity = 69/142 (48.59%), Postives = 93/142 (65.49%), Query Frame = 0


Query: 43  LMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFV 102
           LMV TTFIA +AFQ GTNPPGGVWQ DD    Y AGKSIMATKSPS FI F+  +T CF 
Sbjct: 43  LMVATTFIAAMAFQAGTNPPGGVWQ-DDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFA 102

Query: 103 FSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLF 162
            SAMQF VL  K      K+WS S+  +Y TMG  +S++  AY  +++A TP+++ + + 
Sbjct: 103 CSAMQFIVLLGKS---SEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHV- 162

Query: 163 VISFITMLGFPISLAAISIYLQ 185
           ++   T L   + +  IS+Y++
Sbjct: 163 IVMLKTTLVLSVVVLPISMYIE 179

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_008445521.1 (PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo])

HSP 1 Score: 119.8 bits (299), Expect = 1.0e-23
Identity = 77/187 (41.18%), Postives = 111/187 (59.36%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMRE-DTDFLMVVTTFIATVAFQIGT 60
           MS+      E+  + IDT  +T + K+       WMR  D DF+M+V TFIA VAFQ+GT
Sbjct: 1   MSKAGAKNEEATVVAIDT--ETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGT 60

Query: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVG 120
           NPPG VWQE DK G + AGKSIMA+KSPS++  F+  +T C  FS +Q +V+ L +W + 
Sbjct: 61  NPPGSVWQE-DKNG-FTAGKSIMASKSPSEYKKFMAGVTLCLSFSLIQLSVM-LFRWYL- 120

Query: 121 AKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAI 180
            K +S  R I+Y  M   ++ M F++  SV+A TPD  E  +  I+      F + L ++
Sbjct: 121 -KTYSVRRMIMYLLMICTIAPMIFSFWASVKALTPD--EKIMSEITATIWSSFGVYLMSL 178

Query: 181 SIYLQYF 187
            + L Y+
Sbjct: 181 PLILLYY 178

[Close]

BLAST of CsGy6G018620 vs. NCBI nr
Match: XP_004144204.1 (PREDICTED: uncharacterized protein LOC101208403 [Cucumis sativus] >KGN47596.1 hypothetical protein Csa_6G363520 [Cucumis sativus])

HSP 1 Score: 116.3 bits (290), Expect = 1.1e-22
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMRE-DTDFLMVVTTFIATVAFQIGT 60
           MS+      E+  ++IDT  +  ++K++      WM+  D DF+MVV TFIA VAFQ+G 
Sbjct: 1   MSKAGAKNEEATVVSIDTASE--NKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGI 60

Query: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVG 120
           NPPG VWQE DK G + AGKSIMA+KSPS++  F+  +T C  FS +Q  V+ L +W + 
Sbjct: 61  NPPGSVWQE-DKNG-FTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVM-LFRWYL- 120

Query: 121 AKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLG-FPISLAA 180
            K++S  R I+Y  M   ++ M  ++  SV+A TPD +  +    +  ++LG + ISL  
Sbjct: 121 -KSYSVRRMIMYILMLCTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPI 177

Query: 181 ISIY 183
           I +Y
Sbjct: 181 ILLY 177

[Close]

BLAST of CsGy6G018620 vs. TAIR10
Match: AT5G54710.1 (Ankyrin repeat family protein)

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-05
Identity = 40/143 (27.97%), Postives = 64/143 (44.76%), Query Frame = 0


Query: 43  LMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFV 102
           + +V   IA+VAF  G NPPGGV Q+    GK  AG+++        F  F V      +
Sbjct: 427 ITIVAVLIASVAFTCGINPPGGVHQDGPFIGKATAGRTLA-------FKIFSVANNIA-L 486

Query: 103 FSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLF 162
           F+++    L +       K       I +  M LAV+SM  AY  S     P +E +   
Sbjct: 487 FTSLSIVTLLVSIISYRTKALKMCVVIAHKMMWLAVASMATAYAASAWITVPHNEGSKWL 546

Query: 163 VISFITMLGFPISLAAISIYLQY 186
           V  + T     ++L ++ +Y+ +
Sbjct: 547 V--YTTSAIASVALGSMFVYVSF 559

[Close]

BLAST of CsGy6G018620 vs. TAIR10
Match: AT5G50140.1 (Ankyrin repeat family protein)

HSP 1 Score: 45.4 bits (106), Expect = 4.5e-05
Identity = 36/117 (30.77%), Postives = 53/117 (45.30%), Query Frame = 0


Query: 43  LMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFV 102
           + VV   IA+V F  G NPPGGV+Q+    GK  AG ++        F  F V+  +  +
Sbjct: 367 ITVVAVLIASVTFTCGLNPPGGVYQDGHFIGKATAGGTVA-------FKVFSVS-NSIAL 426

Query: 103 FSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEEN 160
           F+++   +L L   P   K+      I +  + LAV +M  AY        P S  N
Sbjct: 427 FTSLCIVILLLSIIPFRTKSLKTFLIITHKMIWLAVIAMASAYVAGTCVTLPHSRGN 475

[Close]

BLAST of CsGy6G018620 vs. TAIR10
Match: AT3G13950.1 (unknown protein)

HSP 1 Score: 44.3 bits (103), Expect = 1.0e-04
Identity = 27/79 (34.18%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 35  WMREDTDFLMVVTTFIATVAFQIGTNPPGGVWQED-----DKQG-----KYFAGKSIMAT 94
           W+ +    LMV  T IA ++FQ+  NPPGGVWQ D     ++ G     K  AG +++  
Sbjct: 29  WLEKTRGNLMVTATVIAGMSFQVMVNPPGGVWQSDNCSFGNQTGTAPFCKGRAGTAVLEY 88

Query: 95  KSPS--DFIGFLVTITACF 102
           +S     +IG +++ T  F
Sbjct: 89  ESSKRIAYIGMIISSTVSF 107

[Close]

BLAST of CsGy6G018620 vs. TAIR10
Match: AT1G34050.1 (Ankyrin repeat family protein)

HSP 1 Score: 43.9 bits (102), Expect = 1.3e-04
Identity = 37/131 (28.24%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 43  LMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFV 102
           + +V   IA+VAF  G NPPGGV+QE   +GK  AG+++        F  F ++     +
Sbjct: 399 ITIVAVLIASVAFTCGINPPGGVYQEGPYKGKSTAGRTLA-------FQVFSISNNIA-L 458

Query: 103 FSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSE-ENTL 162
           F+++   +L +   P   +       + +  + +AV+SM  AY  +     P  E +  L
Sbjct: 459 FTSLCIVILLVSIIPYRTRPLKNFLKLTHRILWVAVASMALAYVSAASIIIPHVEGKRWL 518

Query: 163 F--VISFITML 171
           F  V+S  T++
Sbjct: 519 FTTVLSISTLM 521

[Close]

BLAST of CsGy6G018620 vs. TrEMBL
Match: tr|A0A0A0KGU1|A0A0A0KGU1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 192/192 (100.00%), Postives = 192/192 (100.00%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMREDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180

Query: 181 IYLQYFSKSSSS 193
           IYLQYFSKSSSS
Sbjct: 181 IYLQYFSKSSSS 192

[Close]

BLAST of CsGy6G018620 vs. TrEMBL
Match: tr|A0A1S3BD33|A0A1S3BD33_CUCME (uncharacterized protein LOC103488576 OS=Cucumis melo OX=3656 GN=LOC103488576 PE=4 SV=1)

HSP 1 Score: 335.5 bits (859), Expect = 7.9e-89
Identity = 172/192 (89.58%), Postives = 180/192 (93.75%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMREDTDFLMVVTTFIATVAFQIGTN 60
           MSRQ NNGAESVAITIDTT +TGHEKNKM     W+REDTDFLMVVTTFIATVAFQIGTN
Sbjct: 1   MSRQ-NNGAESVAITIDTT-ETGHEKNKMMNNNNWIREDTDFLMVVTTFIATVAFQIGTN 60

Query: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVGA 120
           PPGGVWQEDDKQGKYFAGKSIMATKSPSDF G+LVTITACFVFSAMQFAVLFLKKWPVGA
Sbjct: 61  PPGGVWQEDDKQGKYFAGKSIMATKSPSDFSGYLVTITACFVFSAMQFAVLFLKKWPVGA 120

Query: 121 KNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAIS 180
           KNWSFSRFILYSTMGLA+SSMG AYGCSVRAYTPDSEE T +VISFITMLGFPI LAAIS
Sbjct: 121 KNWSFSRFILYSTMGLAISSMGIAYGCSVRAYTPDSEEKTRYVISFITMLGFPIGLAAIS 180

Query: 181 IYLQYFSKSSSS 193
           +YL+YF+KSSSS
Sbjct: 181 LYLEYFNKSSSS 190

[Close]

BLAST of CsGy6G018620 vs. TrEMBL
Match: tr|A0A1S4DVA8|A0A1S4DVA8_CUCME (uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=4 SV=1)

HSP 1 Score: 122.9 bits (307), Expect = 8.0e-25
Identity = 69/142 (48.59%), Postives = 93/142 (65.49%), Query Frame = 0


Query: 43  LMVVTTFIATVAFQIGTNPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFV 102
           LMV TTFIA +AFQ GTNPPGGVWQ DD    Y AGKSIMATKSPS FI F+  +T CF 
Sbjct: 43  LMVATTFIAAMAFQAGTNPPGGVWQ-DDNSPNYEAGKSIMATKSPSLFISFMSGVTVCFA 102

Query: 103 FSAMQFAVLFLKKWPVGAKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLF 162
            SAMQF VL  K      K+WS S+  +Y TMG  +S++  AY  +++A TP+++ + + 
Sbjct: 103 CSAMQFIVLLGKS---SEKSWSVSKSFIYFTMGSGISAIVVAYWSAIKALTPEAQMSHV- 162

Query: 163 VISFITMLGFPISLAAISIYLQ 185
           ++   T L   + +  IS+Y++
Sbjct: 163 IVMLKTTLVLSVVVLPISMYIE 179

[Close]

BLAST of CsGy6G018620 vs. TrEMBL
Match: tr|A0A1S3BCY4|A0A1S3BCY4_CUCME (uncharacterized protein LOC103488512 OS=Cucumis melo OX=3656 GN=LOC103488512 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.8e-24
Identity = 77/187 (41.18%), Postives = 111/187 (59.36%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMRE-DTDFLMVVTTFIATVAFQIGT 60
           MS+      E+  + IDT  +T + K+       WMR  D DF+M+V TFIA VAFQ+GT
Sbjct: 1   MSKAGAKNEEATVVAIDT--ETENRKDGEEMNSGWMRPGDVDFVMIVVTFIAAVAFQVGT 60

Query: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVG 120
           NPPG VWQE DK G + AGKSIMA+KSPS++  F+  +T C  FS +Q +V+ L +W + 
Sbjct: 61  NPPGSVWQE-DKNG-FTAGKSIMASKSPSEYKKFMAGVTLCLSFSLIQLSVM-LFRWYL- 120

Query: 121 AKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLGFPISLAAI 180
            K +S  R I+Y  M   ++ M F++  SV+A TPD  E  +  I+      F + L ++
Sbjct: 121 -KTYSVRRMIMYLLMICTIAPMIFSFWASVKALTPD--EKIMSEITATIWSSFGVYLMSL 178

Query: 181 SIYLQYF 187
            + L Y+
Sbjct: 181 PLILLYY 178

[Close]

BLAST of CsGy6G018620 vs. TrEMBL
Match: tr|A0A0A0KIL3|A0A0A0KIL3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363520 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.5e-23
Identity = 75/184 (40.76%), Postives = 112/184 (60.87%), Query Frame = 0


Query: 1   MSRQNNNGAESVAITIDTTDDTGHEKNKMXXXXXWMRE-DTDFLMVVTTFIATVAFQIGT 60
           MS+      E+  ++IDT  +  ++K++      WM+  D DF+MVV TFIA VAFQ+G 
Sbjct: 1   MSKAGAKNEEATVVSIDTASE--NKKDREEKNSGWMKPGDVDFVMVVVTFIAAVAFQVGI 60

Query: 61  NPPGGVWQEDDKQGKYFAGKSIMATKSPSDFIGFLVTITACFVFSAMQFAVLFLKKWPVG 120
           NPPG VWQE DK G + AGKSIMA+KSPS++  F+  +T C  FS +Q  V+ L +W + 
Sbjct: 61  NPPGSVWQE-DKNG-FTAGKSIMASKSPSEYKKFMAGVTLCLGFSLIQLCVM-LFRWYL- 120

Query: 121 AKNWSFSRFILYSTMGLAVSSMGFAYGCSVRAYTPDSEENTLFVISFITMLG-FPISLAA 180
            K++S  R I+Y  M   ++ M  ++  SV+A TPD +  +    +  ++LG + ISL  
Sbjct: 121 -KSYSVRRMIMYILMLCTIAPMIVSFWASVKALTPDEKLMSEITATIWSILGVYLISLPI 177

Query: 181 ISIY 183
           I +Y
Sbjct: 181 ILLY 177

The following BLAST results are available for this feature:

BLAST of CsGy6G018620 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657373.1	1.7e-98	100.00	PREDICTED: uncharacterized protein LOC105435852 [Cucumis sativus] >KGN47597.1 hy...	[more]
XP_008445596.1	1.2e-88	89.58	PREDICTED: uncharacterized protein LOC103488576 [Cucumis melo]	[more]
XP_016899921.1	1.2e-24	48.59	PREDICTED: uncharacterized protein LOC107990705 [Cucumis melo]	[more]
XP_008445521.1	1.0e-23	41.18	PREDICTED: uncharacterized protein LOC103488512 [Cucumis melo]	[more]
XP_004144204.1	1.1e-22	40.76	PREDICTED: uncharacterized protein LOC101208403 [Cucumis sativus] >KGN47596.1 hy...	[more]

BLAST of CsGy6G018620 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G54710.1	4.5e-05	27.97	Ankyrin repeat family protein	[more]
AT5G50140.1	4.5e-05	30.77	Ankyrin repeat family protein	[more]
AT3G13950.1	1.0e-04	34.18	unknown protein	[more]
AT1G34050.1	1.3e-04	28.24	Ankyrin repeat family protein	[more]

BLAST of CsGy6G018620 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy6G018620 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KGU1\|A0A0A0KGU1_CUCSA	1.1e-98	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363530 PE=4 SV=1	[more]
tr\|A0A1S3BD33\|A0A1S3BD33_CUCME	7.9e-89	89.58	uncharacterized protein LOC103488576 OS=Cucumis melo OX=3656 GN=LOC103488576 PE=...	[more]
tr\|A0A1S4DVA8\|A0A1S4DVA8_CUCME	8.0e-25	48.59	uncharacterized protein LOC107990705 OS=Cucumis melo OX=3656 GN=LOC107990705 PE=...	[more]
tr\|A0A1S3BCY4\|A0A1S3BCY4_CUCME	6.8e-24	41.18	uncharacterized protein LOC103488512 OS=Cucumis melo OX=3656 GN=LOC103488512 PE=...	[more]
tr\|A0A0A0KIL3\|A0A0A0KIL3_CUCSA	7.5e-23	40.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G363520 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR026961	PGG_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G018620.1	CsGy6G018620.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR026961	PGG domain	PFAM	PF13962	PGG	coord: 34..149 e-value: 1.2E-20 score: 73.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..18
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR24177:SF110	SUBFAMILY NOT NAMED	coord: 17..168
None	No IPR available	PANTHER	PTHR24177	FAMILY NOT NAMED	coord: 17..168

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G018620	Cucurbita maxima (Rimu)	cgybcmaB718
CsGy6G018620	Cucurbita maxima (Rimu)	cgybcmaB844
CsGy6G018620	Cucurbita moschata (Rifu)	cgybcmoB698
CsGy6G018620	Cucurbita moschata (Rifu)	cgybcmoB702
CsGy6G018620	Cucurbita moschata (Rifu)	cgybcmoB825
CsGy6G018620	Cucurbita pepo (Zucchini)	cgybcpeB714
CsGy6G018620	Cucurbita pepo (Zucchini)	cgybcpeB875
CsGy6G018620	Cucurbita pepo (Zucchini)	cgybcpeB879
CsGy6G018620	Cucumber (Chinese Long) v2	cgybcuB275
CsGy6G018620	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G018620	Bottle gourd (USVL1VR-Ls)	cgyblsiB437
CsGy6G018620	Melon (DHL92) v3.5.1	cgybmeB406
CsGy6G018620	Melon (DHL92) v3.6.1	cgybmedB405
CsGy6G018620	Watermelon (Charleston Gray)	cgybwcgB454
CsGy6G018620	Watermelon (97103) v1	cgybwmB427
CsGy6G018620	Wild cucumber (PI 183967)	cgybcpiB282
CsGy6G018620	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G018620	Silver-seed gourd	carcgybB0156
CsGy6G018620	Silver-seed gourd	carcgybB0695
CsGy6G018620	Cucumber (Chinese Long) v3	cgybcucB289
CsGy6G018620	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G018620	Watermelon (97103) v2	cgybwmbB463
CsGy6G018620	Wax gourd	cgybwgoB559