CsGy6G018360 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: five_prime_UTRexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCCCCCTCATGATTCTCTCCTTCTTCTTCTTCCTCTAATTTACACAAACAATCCCATTTTAATGGAACTCAATCACCTTAATCAACATCCAATTTCCACTCCTTACATTCCTACCCTTCTCAAACATTCCAAAATCAAACCACCCCTCAATCCCAATTCTTCCTCTTCCTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCTTCCTCCTCTTCTTCTAAAATGGCTGACCCAATTCCCAAATCTCAACCAACCCAACCCCACAAGAAACAAGTTCGAAGAAGACTCCATACCAGTCGACCCTATCAAGAACGCTTGTTGAATATGGCCGAAGCCAGAAGGGAGATTGTTACTGCGCTTAAGTATCACCGGGCCGCCATGAAAAAGGCCGCCGCAGCCGCCACTTCCACTGCCACCGCTCCGCGGTCGCCGGTGGAGGAGTCATCCCCTGTCAGATCCCAAGAAGGGAAGATCAAACCCAGGAAAAACCCTAAATCCTCAACTACTACAGAGAGAAATAGAGAAACACCACAGAGTAATTTCAAATGTTACAATAATAACAATCTGAAGAATTCGTGTTACGATCCATCGATGATGATGATGATGAATTGTTCGTTACCTAGTTGGTCGATGGAAGGGAATAATAACATTGTGGACATTGTATTACCAGAGCAAACTCTTGGACTGAATCTAAACCTGCAGGATTTCAAGAATTTGGATGCGAATCTGTTTTCAAATAGTAGCATGTCGGTTTCGGGTTCGACATCGACATCAATAGGAAGGGATCAGGAACAGGAATTAGGAGGGGGCGGAGGAAGGGGCATGCACGTGGCAGTGGGGGAGGAGGAGATGGCGGAGATGAGAACGATAGGGGAGAAACATGAGATGGAATGGAGTGATAAGATGAGTATGGTGAAATCGGCATGGTGGTTGAGATTTATGAAGATGGGGGAAAAGGAAGAGGAAGAAGATCAAGAAGATCAATTAGAAGGGTTTGGATATGGATATGGGGATCCGTTTGATCAGATATTGGAGTTTCCAGATTGGATGAACAATGGAAATGAGAATTGCTTTGAAGAAGAACAATTAAAGTTGAATGATTATTCCCAGTTCTTCCATCATGATCATCCTTCTGCTCTTCCTTGGTAACACTCACTTTTTTTTCTTTTCAGTCATCTCTGTTTTTTTCACTGTTGGATTCATTTTGATGAACAATTGATGCAGAATCTTTCTTGTGCAAATATTTTAATCACACAACAACAATATTATTATTATATTCACTATTGATAACTATTATTATAATTTTTTTAAAAACAAGGTGAAATGATTGTGCATTTAGTTTCATAAAACTTGAAACTTTGCTATTACTATTTTGAGTGAGTTGGATGGAAGAAAGTTTTGATCTTTTAATCTTTGTTTATTTTTTAAAATACTCCCTTTAGTATAAAAGGATTATATCTACTACTTTACAAATTTAAATTGTTATCTAACAACATGATTATTGCAATAAGAGTACATAGACAAAAATAATGTCGTTTAATTTAATAGGATTCATTTTATTTGAATTTTTCTAGCAAACTATTTTCTTTCTTATATGAACATACTAATTTGATATTAGTTTCATGTCAATTTCAATTTCATTAATAAAAAAGACTTAGTTAACTCTTTCCTCTATCAAGAATCCATGAAAACAAATTTAAACAAGAACAAGTTGAGGTTAATAGAAATAGAAATAATAATAATAATAACAACATCAATTTACACAAAAGACAAACTCAAAATGTTTGTATGTATGTGATATATATATATATATATATACCCTCTATTATTGGATCATTTTTTGACATTTACTTCGTTTTCATATTGTAAAAACATCTTGGATGCATGTATTCCCACTTACATAATAAAAATAAAATAAGCTAATATTTAAAAGATCATTTTTTTAAACCGAGACTAATAGTCTATTTTACACTACAATTAGGAAGCAGTGGGCTTTCTTCTTAAAAAGGCTTCGTATTTGGGCCTTTGGGGTTGTCAAGGCCCAAAATTATTTGTCTTTTTCTTTTCCAAAGTAAATATTAGTCTTTACTAATTAATTCTATGTTTATGTGTATTTTTTGTTGTTGGGTGCAGTATGGACATTGGAGAGTTTGAAGGCATGGATGGGGAGTGGTTGGCTTGAAAAAGGATTTGATTGTTTTTTACTAATCAAATCTACAGGAACTTTTTCTTTTTTTCTTTTATATTTTTTAATATAAATATATAAATATATATAAATATATATA CCCCCCTCATGATTCTCTCCTTCTTCTTCTTCCTCTAATTTACACAAACAATCCCATTTTAATGGAACTCAATCACCTTAATCAACATCCAATTTCCACTCCTTACATTCCTACCCTTCTCAAACATTCCAAAATCAAACCACCCCTCAATCCCAATTCTTCCTCTTCCTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCTTCCTCCTCTTCTTCTAAAATGGCTGACCCAATTCCCAAATCTCAACCAACCCAACCCCACAAGAAACAAGTTCGAAGAAGACTCCATACCAGTCGACCCTATCAAGAACGCTTGTTGAATATGGCCGAAGCCAGAAGGGAGATTGTTACTGCGCTTAAGTATCACCGGGCCGCCATGAAAAAGGCCGCCGCAGCCGCCACTTCCACTGCCACCGCTCCGCGGTCGCCGGTGGAGGAGTCATCCCCTGTCAGATCCCAAGAAGGGAAGATCAAACCCAGGAAAAACCCTAAATCCTCAACTACTACAGAGAGAAATAGAGAAACACCACAGAGTAATTTCAAATGTTACAATAATAACAATCTGAAGAATTCGTGTTACGATCCATCGATGATGATGATGATGAATTGTTCGTTACCTAGTTGGTCGATGGAAGGGAATAATAACATTGTGGACATTGTATTACCAGAGCAAACTCTTGGACTGAATCTAAACCTGCAGGATTTCAAGAATTTGGATGCGAATCTGTTTTCAAATAGTAGCATGTCGGTTTCGGGTTCGACATCGACATCAATAGGAAGGGATCAGGAACAGGAATTAGGAGGGGGCGGAGGAAGGGGCATGCACGTGGCAGTGGGGGAGGAGGAGATGGCGGAGATGAGAACGATAGGGGAGAAACATGAGATGGAATGGAGTGATAAGATGAGTATGGTGAAATCGGCATGGTGGTTGAGATTTATGAAGATGGGGGAAAAGGAAGAGGAAGAAGATCAAGAAGATCAATTAGAAGGGTTTGGATATGGATATGGGGATCCGTTTGATCAGATATTGGAGTTTCCAGATTGGATGAACAATGGAAATGAGAATTGCTTTGAAGAAGAACAATTAAAGTTGAATGATTATTCCCAGTTCTTCCATCATGATCATCCTTCTGCTCTTCCTTGTATGGACATTGGAGAGTTTGAAGGCATGGATGGGGAGTGGTTGGCTTGAAAAAGGATTTGATTGTTTTTTACTAATCAAATCTACAGGAACTTTTTCTTTTTTTCTTTTATATTTTTTAATATAAATATATAAATATATATAAATATATATA ATGGAACTCAATCACCTTAATCAACATCCAATTTCCACTCCTTACATTCCTACCCTTCTCAAACATTCCAAAATCAAACCACCCCTCAATCCCAATTCTTCCTCTTCCTCCTCCTCTTCTTCCTCTTCCTCCTCTTCTTCTTCCTCCTCTTCTTCTAAAATGGCTGACCCAATTCCCAAATCTCAACCAACCCAACCCCACAAGAAACAAGTTCGAAGAAGACTCCATACCAGTCGACCCTATCAAGAACGCTTGTTGAATATGGCCGAAGCCAGAAGGGAGATTGTTACTGCGCTTAAGTATCACCGGGCCGCCATGAAAAAGGCCGCCGCAGCCGCCACTTCCACTGCCACCGCTCCGCGGTCGCCGGTGGAGGAGTCATCCCCTGTCAGATCCCAAGAAGGGAAGATCAAACCCAGGAAAAACCCTAAATCCTCAACTACTACAGAGAGAAATAGAGAAACACCACAGAGTAATTTCAAATGTTACAATAATAACAATCTGAAGAATTCGTGTTACGATCCATCGATGATGATGATGATGAATTGTTCGTTACCTAGTTGGTCGATGGAAGGGAATAATAACATTGTGGACATTGTATTACCAGAGCAAACTCTTGGACTGAATCTAAACCTGCAGGATTTCAAGAATTTGGATGCGAATCTGTTTTCAAATAGTAGCATGTCGGTTTCGGGTTCGACATCGACATCAATAGGAAGGGATCAGGAACAGGAATTAGGAGGGGGCGGAGGAAGGGGCATGCACGTGGCAGTGGGGGAGGAGGAGATGGCGGAGATGAGAACGATAGGGGAGAAACATGAGATGGAATGGAGTGATAAGATGAGTATGGTGAAATCGGCATGGTGGTTGAGATTTATGAAGATGGGGGAAAAGGAAGAGGAAGAAGATCAAGAAGATCAATTAGAAGGGTTTGGATATGGATATGGGGATCCGTTTGATCAGATATTGGAGTTTCCAGATTGGATGAACAATGGAAATGAGAATTGCTTTGAAGAAGAACAATTAAAGTTGAATGATTATTCCCAGTTCTTCCATCATGATCATCCTTCTGCTCTTCCTTGTATGGACATTGGAGAGTTTGAAGGCATGGATGGGGAGTGGTTGGCTTGA MELNHLNQHPISTPYIPTLLKHSKIKPPLNPNSSSSSSSSSSSSSSSSSSSSKMADPIPKSQPTQPHKKQVRRRLHTSRPYQERLLNMAEARREIVTALKYHRAAMKKAAAAATSTATAPRSPVEESSPVRSQEGKIKPRKNPKSSTTTERNRETPQSNFKCYNNNNLKNSCYDPSMMMMMNCSLPSWSMEGNNNIVDIVLPEQTLGLNLNLQDFKNLDANLFSNSSMSVSGSTSTSIGRDQEQELGGGGGRGMHVAVGEEEMAEMRTIGEKHEMEWSDKMSMVKSAWWLRFMKMGEKEEEEDQEDQLEGFGYGYGDPFDQILEFPDWMNNGNENCFEEEQLKLNDYSQFFHHDHPSALPCMDIGEFEGMDGEWLA
BLAST of CsGy6G018360 vs. NCBI nr
Match: XP_011657359.1 (PREDICTED: vitellogenin-A2 [Cucumis sativus]) HSP 1 Score: 557.4 bits (1435), Expect = 3.8e-155 Identity = 376/380 (98.95%), Postives = 376/380 (98.95%), Query Frame = 0
BLAST of CsGy6G018360 vs. NCBI nr
Match: KGN47568.1 (hypothetical protein Csa_6G361300 [Cucumis sativus]) HSP 1 Score: 520.8 bits (1340), Expect = 3.9e-144 Identity = 360/364 (98.90%), Postives = 360/364 (98.90%), Query Frame = 0
BLAST of CsGy6G018360 vs. NCBI nr
Match: XP_008464887.1 (PREDICTED: protein AF-9 [Cucumis melo]) HSP 1 Score: 483.4 bits (1243), Expect = 6.9e-133 Identity = 343/381 (90.03%), Postives = 349/381 (91.60%), Query Frame = 0
BLAST of CsGy6G018360 vs. NCBI nr
Match: XP_022999732.1 (uncharacterized protein LOC111493992 isoform X1 [Cucurbita maxima]) HSP 1 Score: 302.8 bits (774), Expect = 1.7e-78 Identity = 234/392 (59.69%), Postives = 261/392 (66.58%), Query Frame = 0
BLAST of CsGy6G018360 vs. NCBI nr
Match: XP_023546423.1 (uncharacterized protein LOC111805545 [Cucurbita pepo subsp. pepo] >XP_023546844.1 uncharacterized protein LOC111805835 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 297.4 bits (760), Expect = 7.0e-77 Identity = 229/398 (57.54%), Postives = 255/398 (64.07%), Query Frame = 0
BLAST of CsGy6G018360 vs. TAIR10
Match: AT5G21280.1 (hydroxyproline-rich glycoprotein family protein) HSP 1 Score: 59.7 bits (143), Expect = 4.5e-09 Identity = 114/307 (37.13%), Postives = 128/307 (41.69%), Query Frame = 0
BLAST of CsGy6G018360 vs. TrEMBL
Match: tr|A0A0A0KDI3|A0A0A0KDI3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361300 PE=4 SV=1) HSP 1 Score: 520.8 bits (1340), Expect = 2.6e-144 Identity = 360/364 (98.90%), Postives = 360/364 (98.90%), Query Frame = 0
BLAST of CsGy6G018360 vs. TrEMBL
Match: tr|A0A1S3CML6|A0A1S3CML6_CUCME (protein AF-9 OS=Cucumis melo OX=3656 GN=LOC103502646 PE=4 SV=1) HSP 1 Score: 483.4 bits (1243), Expect = 4.6e-133 Identity = 343/381 (90.03%), Postives = 349/381 (91.60%), Query Frame = 0
BLAST of CsGy6G018360 vs. TrEMBL
Match: tr|V4UUB5|V4UUB5_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008490mg PE=4 SV=1) HSP 1 Score: 177.9 bits (450), Expect = 4.1e-41 Identity = 137/341 (40.18%), Postives = 169/341 (49.56%), Query Frame = 0
BLAST of CsGy6G018360 vs. TrEMBL
Match: tr|A0A2H5NBH4|A0A2H5NBH4_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_029790 PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 5.4e-41 Identity = 140/337 (41.54%), Postives = 172/337 (51.04%), Query Frame = 0
BLAST of CsGy6G018360 vs. TrEMBL
Match: tr|A0A067G299|A0A067G299_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g046333mg PE=4 SV=1) HSP 1 Score: 177.6 bits (449), Expect = 5.4e-41 Identity = 140/337 (41.54%), Postives = 172/337 (51.04%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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