CsGy6G018280 (gene) Cucumber (Gy14) v2

NameCsGy6G018280
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 19034380 .. 19035349 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGTTCATGAATTGGAGGCCGATCCCATCCAATAATTCTCATATACTTCACATATCATCTCAATTCTACCTGATGAGGTTTAATTTTATCATTTTCTTTCCTCTGATTTTTCTGCTACTCATTATTTGGAGTATGTCCTCCATATAATAATATTTGTTAGTACTCATTTTTTGTGTCTGCATGGGTGGGTAGAATTAATAATTCTCTTTCTCTTCGATCTCAGATACGAAAACTTTTGTACTAACTGCATCTTCTTTTCACCCTCTAAACTAGATAATGGATAATGGGAATTTAGATAATCATACACTTAAGCTTAAAACAGTTTATATATAAGTTGGGGATAGTTTGAAACAAAAAGTGTAGACTACTTCTCTTGTATGATGAAAGATTTTCAAATCAACAAAGTGGCTTTTTCTTTTTCTTTTCTGTTAACTAGTACAATTAAATTCAACTTTTAACTTTAACATTTGAGATATTTGAGATAAGAAGTTGGTTATTATAATCCTTAATAGGGTTGAATTATAATAGTTTATATTTAAATTGTAAATTATTTTAGTTTATGTTATAATTAATAGTATGTGTTTGAGGTGCATAACATTTTTAGTTTGTGAAGAAAATAGTAAACATTGCAATAAAGAATAAAAAAAATTGAATATAAAATAGTAAAAACCAAAACAGACGAGATTTTTGAAATAGTGTTAACCATAATTAATTATATTTATAGTAACAAAGATGTAGCTATTGTGGTCTTAGATAGCTCTTGTTCCAAACAACGGTAAACGCAATTATTTTTACTCAGCTATTGGGACATCGAGCATACAATAGCAGAAAGGACCCTTCATCAGCTGGCCATGCATTTGCACAACGTCTTGAAAGGAAACCTAAATCCGACAACAATTTTATTGTCAAGAGGATCAAAAGCATTCGAGCTAAACTATGTCGTTTTTGTTTTTCTTTGTTCTAA

mRNA sequence

ATGAAGAAGTTCATGAATTGGAGGCCGATCCCATCCAATAATTCTCATATACTTCACATATCATCTCAATTCTACCTGATGAGAAAGGACCCTTCATCAGCTGGCCATGCATTTGCACAACGTCTTGAAAGGAAACCTAAATCCGACAACAATTTTATTGTCAAGAGGATCAAAAGCATTCGAGCTAAACTATGTCGTTTTTGTTTTTCTTTGTTCTAA

Coding sequence (CDS)

ATGAAGAAGTTCATGAATTGGAGGCCGATCCCATCCAATAATTCTCATATACTTCACATATCATCTCAATTCTACCTGATGAGAAAGGACCCTTCATCAGCTGGCCATGCATTTGCACAACGTCTTGAAAGGAAACCTAAATCCGACAACAATTTTATTGTCAAGAGGATCAAAAGCATTCGAGCTAAACTATGTCGTTTTTGTTTTTCTTTGTTCTAA

Protein sequence

MKKFMNWRPIPSNNSHILHISSQFYLMRKDPSSAGHAFAQRLERKPKSDNNFIVKRIKSIRAKLCRFCFSLF
BLAST of CsGy6G018280 vs. NCBI nr
Match: KGN47559.1 (hypothetical protein Csa_6G361210 [Cucumis sativus])

HSP 1 Score: 56.2 bits (134), Expect = 5.2e-05
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0

Query: 25  YLMRKDPSSAGHAFAQRLERKPKSDNNFIVKRIKSIRAKLCRFCFSL 72
           Y  RK+ S AG A  +R +RK KSDN+FIVK+I+S RAKLCRF F++
Sbjct: 58  YNSRKNYSPAGRALPERPKRKHKSDNSFIVKKIRSTRAKLCRFLFNI 104

BLAST of CsGy6G018280 vs. TrEMBL
Match: tr|A0A0A0KFH5|A0A0A0KFH5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361210 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 3.5e-05
Identity = 28/47 (59.57%), Postives = 36/47 (76.60%), Query Frame = 0

Query: 25  YLMRKDPSSAGHAFAQRLERKPKSDNNFIVKRIKSIRAKLCRFCFSL 72
           Y  RK+ S AG A  +R +RK KSDN+FIVK+I+S RAKLCRF F++
Sbjct: 58  YNSRKNYSPAGRALPERPKRKHKSDNSFIVKKIRSTRAKLCRFLFNI 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN47559.15.2e-0559.57hypothetical protein Csa_6G361210 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KFH5|A0A0A0KFH5_CUCSA3.5e-0559.57Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G361210 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G018280.1CsGy6G018280.1mRNA


The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None