CsGy6G016550 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G016550
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Glutamate receptor
Location	Chr6 : 15590802 .. 15591467 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGCGAGTTTCCTGATCGATGTTGGAGACAAAGCACAAGTTTCCATAATCTCATTTTCCGCCACACGACCTTCCCTCACATCCCATCGCGGCTCTTACTTCTTCCGAATCACCCAAGCTGATTCCTTTCAAGTGAAAGCCATTGCAGCCATTGTCAAGGCTTTCAAATGGAGAAAAATTGTCTCAATCTACGTCGACAACGAGTTCGGCGACGGTATCATACCTTTCCTTGTCGATGCTTTACAAGAGGTAGATGCAAATGTGTCATACCAAAGCGTCATCTCTCTTACCGCCACCAACGACGAGATTGAACTCAAACTTTCAAATTTAATGAATATGCAAACTCGAGTGTTTGTGGTGCACATGTTACCTCCCCTTGCTTCAAGACTCTTCATTGTGGCAAAAAAGAAGGGAATGATGGGTCGTGGCTACACTTGGATAGTAATAGATGCTATCACAAACGAATTTAATTCGAAACCCTTAATTTTTTATCAATCAATGCAAGGAGTTTTGGGAATAAGAAATTATGTCCCAGGAATCAAACGCCTTGAATCCTTTAAACGTGATTGGCAAAAGAGATTTCTAAGGTACTATCCAACCATAGAAGAAATTCCTGAGCTCAACGTGTTTGGTTTATGGGCTTATGACGCTGCTTGGCGCTAG

mRNA sequence

ATGCAAGCGAGTTTCCTGATCGATGTTGGAGACAAAGCACAAGTTTCCATAATCTCATTTTCCGCCACACGACCTTCCCTCACATCCCATCGCGGCTCTTACTTCTTCCGAATCACCCAAGCTGATTCCTTTCAAGTGAAAGCCATTGCAGCCATTGTCAAGGCTTTCAAATGGAGAAAAATTGTCTCAATCTACGTCGACAACGAGTTCGGCGACGGTATCATACCTTTCCTTGTCGATGCTTTACAAGAGGTAGATGCAAATGTGTCATACCAAAGCGTCATCTCTCTTACCGCCACCAACGACGAGATTGAACTCAAACTTTCAAATTTAATGAATATGCAAACTCGAGTGTTTGTGGTGCACATGTTACCTCCCCTTGCTTCAAGACTCTTCATTGTGGCAAAAAAGAAGGGAATGATGGGTCGTGGCTACACTTGGATAGTAATAGATGCTATCACAAACGAATTTAATTCGAAACCCTTAATTTTTTATCAATCAATGCAAGGAGTTTTGGGAATAAGAAATTATGTCCCAGGAATCAAACGCCTTGAATCCTTTAAACGTGATTGGCAAAAGAGATTTCTAAGGTACTATCCAACCATAGAAGAAATTCCTGAGCTCAACGTGTTTGGTTTATGGGCTTATGACGCTGCTTGGCGCTAG

Coding sequence (CDS)

ATGCAAGCGAGTTTCCTGATCGATGTTGGAGACAAAGCACAAGTTTCCATAATCTCATTTTCCGCCACACGACCTTCCCTCACATCCCATCGCGGCTCTTACTTCTTCCGAATCACCCAAGCTGATTCCTTTCAAGTGAAAGCCATTGCAGCCATTGTCAAGGCTTTCAAATGGAGAAAAATTGTCTCAATCTACGTCGACAACGAGTTCGGCGACGGTATCATACCTTTCCTTGTCGATGCTTTACAAGAGGTAGATGCAAATGTGTCATACCAAAGCGTCATCTCTCTTACCGCCACCAACGACGAGATTGAACTCAAACTTTCAAATTTAATGAATATGCAAACTCGAGTGTTTGTGGTGCACATGTTACCTCCCCTTGCTTCAAGACTCTTCATTGTGGCAAAAAAGAAGGGAATGATGGGTCGTGGCTACACTTGGATAGTAATAGATGCTATCACAAACGAATTTAATTCGAAACCCTTAATTTTTTATCAATCAATGCAAGGAGTTTTGGGAATAAGAAATTATGTCCCAGGAATCAAACGCCTTGAATCCTTTAAACGTGATTGGCAAAAGAGATTTCTAAGGTACTATCCAACCATAGAAGAAATTCCTGAGCTCAACGTGTTTGGTTTATGGGCTTATGACGCTGCTTGGCGCTAG

Protein sequence

MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRKIVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFVVHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPGIKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAWR

Homology

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BLAST of CsGy6G016550 vs. NCBI nr
Match: XP_016899964.1 (PREDICTED: glutamate receptor 2.5-like [Cucumis melo])

HSP 1 Score: 378.3 bits (970), Expect = 1.8e-101
Identity = 189/221 (85.52%), Postives = 201/221 (90.95%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQASF+IDVGDKAQV IISFSATRPSLTSHR  +FFRI QADSFQVKAIAAIVKAFKWRK
Sbjct: 103 MQASFMIDVGDKAQVPIISFSATRPSLTSHRSPFFFRIAQADSFQVKAIAAIVKAFKWRK 162

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IYVDNEFGDGIIP+LVDALQEVDANV YQ++IS TATNDEIELKLSNLMN+QTRVFV
Sbjct: 163 VVPIYVDNEFGDGIIPYLVDALQEVDANVPYQTLISPTATNDEIELKLSNLMNLQTRVFV 222

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNS-KPLIFYQSMQGVLGIRNYVP 180
           VHMLP LASRLF +AKKKGMMGRG+ WIV DAITNEFNS +P I  QSMQGVLGI+ YVP
Sbjct: 223 VHMLPDLASRLFTMAKKKGMMGRGFAWIVTDAITNEFNSMEPSILDQSMQGVLGIKTYVP 282

Query: 181 GIKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
           G KRLESFKR WQ+RFL YYPTIEEIPELNVFGLWAYD AW
Sbjct: 283 GTKRLESFKRGWQRRFLSYYPTIEEIPELNVFGLWAYDTAW 323

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BLAST of CsGy6G016550 vs. NCBI nr
Match: XP_022951722.1 (glutamate receptor 2.5-like [Cucurbita moschata])

HSP 1 Score: 309.7 bits (792), Expect = 8.1e-81
Identity = 151/220 (68.64%), Postives = 184/220 (83.64%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQASF+IDVG KA V IISFSATRPSLTSHR S+FFR  Q D+ QVKAI +IVKAFKWR+
Sbjct: 105 MQASFVIDVGAKAHVPIISFSATRPSLTSHRSSFFFRAAQDDASQVKAIGSIVKAFKWRQ 164

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IYVD+ FGDGIIP+L+DALQ V+A+V YQS+IS TAT+D+I  +L  LM MQTRVFV
Sbjct: 165 VVPIYVDDMFGDGIIPYLIDALQNVNAHVPYQSIISPTATDDQIIGELYKLMTMQTRVFV 224

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHMLP LASR+FI AK+ GMM +GY WIV ++ITNE +S  L  ++SMQGV+GI+ Y+P 
Sbjct: 225 VHMLPGLASRIFIKAKQIGMMNKGYVWIVTNSITNELDSINLSIFESMQGVIGIKTYIPR 284

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
            ++LE+F+  W+KRFL+YYPTIE IPEL+VFGLWAYDAAW
Sbjct: 285 TQKLEAFEDSWRKRFLKYYPTIEHIPELDVFGLWAYDAAW 324

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BLAST of CsGy6G016550 vs. NCBI nr
Match: XP_008445295.1 (PREDICTED: glutamate receptor 2.5-like [Cucumis melo])

HSP 1 Score: 306.6 bits (784), Expect = 6.8e-80
Identity = 148/220 (67.27%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA+F+ID+GDKAQV IISFSATRPSLTSHR S+FFR+ Q DS QVKAI AIVK FKWRK
Sbjct: 117 MQANFMIDIGDKAQVPIISFSATRPSLTSHRSSFFFRVAQDDSSQVKAIGAIVKTFKWRK 176

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IYVDNEFGDGIIP+L+DALQEV+A+V YQS+IS   T+D +  +L  LM MQTRVFV
Sbjct: 177 VVPIYVDNEFGDGIIPYLIDALQEVNAHVPYQSIISPDVTDDHLTSELYKLMTMQTRVFV 236

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHML  LASR+F  AK+ GMM +GY WI+ D +TN   S     ++SMQGV+GI+ YVP 
Sbjct: 237 VHMLSDLASRIFTKAKQIGMMKKGYVWIITDGVTNMLESIKPSTFESMQGVIGIKTYVPR 296

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
            ++LESF+RDW+KRFL  YP +EE+PEL+VF LWAYDAAW
Sbjct: 297 TEKLESFERDWRKRFLGSYPKMEEVPELDVFALWAYDAAW 336

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BLAST of CsGy6G016550 vs. NCBI nr
Match: XP_008445300.1 (PREDICTED: glutamate receptor 2.1-like isoform X1 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 154/220 (70.00%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA+F+ID+GDKA+V IISFSATRPSLTSHR S+FFR  Q DS QVKAI AIVK FKWR+
Sbjct: 123 MQANFMIDIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ 182

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IY DNEFGDGIIP L+DALQEVD +V YQS IS TAT+++I L+L  LM MQTRVFV
Sbjct: 183 VVPIYSDNEFGDGIIPDLIDALQEVDTDVPYQSKISPTATDEQISLELYKLMTMQTRVFV 242

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHML   ASRLF  AK+ GMM  GY WI+ DAI N  +       +SMQGVLGIR +VP 
Sbjct: 243 VHMLARDASRLFAKAKEIGMMKEGYVWIITDAIANPLDLIEPSILESMQGVLGIRTHVPK 302

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
            KRLE FK +W+KRF RYYPTIE+IPELNVFGLWAYDAAW
Sbjct: 303 SKRLEYFKLEWRKRFRRYYPTIEDIPELNVFGLWAYDAAW 342

[Close]

BLAST of CsGy6G016550 vs. NCBI nr
Match: XP_008445301.1 (PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo])

HSP 1 Score: 305.1 bits (780), Expect = 2.0e-79
Identity = 154/220 (70.00%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA+F+ID+GDKA+V IISFSATRPSLTSHR S+FFR  Q DS QVKAI AIVK FKWR+
Sbjct: 123 MQANFMIDIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ 182

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IY DNEFGDGIIP L+DALQEVD +V YQS IS TAT+++I L+L  LM MQTRVFV
Sbjct: 183 VVPIYSDNEFGDGIIPDLIDALQEVDTDVPYQSKISPTATDEQISLELYKLMTMQTRVFV 242

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHML   ASRLF  AK+ GMM  GY WI+ DAI N  +       +SMQGVLGIR +VP 
Sbjct: 243 VHMLARDASRLFAKAKEIGMMKEGYVWIITDAIANPLDLIEPSILESMQGVLGIRTHVPK 302

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
            KRLE FK +W+KRF RYYPTIE+IPELNVFGLWAYDAAW
Sbjct: 303 SKRLEYFKLEWRKRFRRYYPTIEDIPELNVFGLWAYDAAW 342

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BLAST of CsGy6G016550 vs. TAIR10
Match: AT2G24720.1 (glutamate receptor 2.2)

HSP 1 Score: 219.9 bits (559), Expect = 1.5e-57
Identity = 108/218 (49.54%), Postives = 152/218 (69.72%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA FLI++G K++V ++S+SAT PSLTS R  YFFR T  DS QV AI AI+K F WR+
Sbjct: 107 MQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYEDSSQVHAIKAIIKLFGWRE 166

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V +Y+DN FG+GI+P L D+LQ+++  + Y+SVI L AT+ +I ++L  +MNM TRVF+
Sbjct: 167 VVPVYIDNTFGEGIMPRLTDSLQDINVRIPYRSVIPLNATDQDISVELLKMMNMPTRVFI 226

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHM   LAS +FI AK+ G+M  GY WI+ + + +   S      ++M+GVLGI+ Y+P 
Sbjct: 227 VHMSSSLASTVFIKAKELGLMKPGYVWILTNGVMDGLRSINETGIEAMEGVLGIKTYIPK 286

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDA 219
            K LE+F+  W++RF +         ELNV+GLWAYDA
Sbjct: 287 SKDLETFRSRWKRRFPQM--------ELNVYGLWAYDA 316

[Close]

BLAST of CsGy6G016550 vs. TAIR10
Match: AT5G27100.1 (glutamate receptor 2.1)

HSP 1 Score: 214.5 bits (545), Expect = 6.4e-56
Identity = 107/218 (49.08%), Postives = 148/218 (67.89%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA F+I++G K+QV I+++SAT PSL S R  YFFR T  DS QV AI  I+K F WR+
Sbjct: 107 MQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDDSSQVHAIKEIIKLFGWRE 166

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +  +YVD+ FG+GI+P L D LQE++  + Y++VIS  AT+DEI ++L  +M + TRVFV
Sbjct: 167 VAPVYVDDTFGEGIMPRLTDVLQEINVRIPYRTVISPNATDDEISVELLRMMTLPTRVFV 226

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VH++  LASR F  A + G+M +GY WI+ + IT+  +       ++MQGVLG++ YVP 
Sbjct: 227 VHLVELLASRFFAKATEIGLMKQGYVWILTNTITDVLSIMNETEIETMQGVLGVKTYVPR 286

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDA 219
            K LE+F+  W KRF         I +LNV+GLWAYDA
Sbjct: 287 SKELENFRSRWTKRF--------PISDLNVYGLWAYDA 316

[Close]

BLAST of CsGy6G016550 vs. TAIR10
Match: AT2G24710.1 (glutamate receptor 2.3)

HSP 1 Score: 213.8 bits (543), Expect = 1.1e-55
Identity = 106/218 (48.62%), Postives = 149/218 (68.35%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA FLI++G K++V I+S+SAT P LTS R  YF R T  DSFQV+ I AI+K F WR+
Sbjct: 106 MQAHFLIEIGQKSRVPIVSYSATSPILTSLRSPYFLRATYEDSFQVQPIKAIIKLFGWRE 165

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V +Y+DN FG+GI+P L DALQ+++  + Y+SVI++ AT+ EI ++L  +MNM TRVF+
Sbjct: 166 VVPVYIDNTFGEGIMPRLTDALQDINVRIPYRSVIAINATDHEISVELLKMMNMPTRVFL 225

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHM   LASR FI AK+ G+M  GY WI+ + + ++ +       ++M+GVLGI+ Y+P 
Sbjct: 226 VHMYYDLASRFFIKAKELGLMEPGYVWILTNGVIDDLSLINETAVEAMEGVLGIKTYIPK 285

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDA 219
              LE F+  W+  F R         EL+V+GLWAYDA
Sbjct: 286 SPDLEKFRSRWRSLFPRV--------ELSVYGLWAYDA 315

[Close]

BLAST of CsGy6G016550 vs. TAIR10
Match: AT5G11180.1 (glutamate receptor 2.6)

HSP 1 Score: 208.0 bits (528), Expect = 6.0e-54
Identity = 106/219 (48.40%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA FLI++G+++QV IISFSA+ P L S R  YF R T  DS QV AI+AI+++F+WR+
Sbjct: 111 MQAPFLINLGNQSQVPIISFSASSPVLDSLRSPYFIRATHDDSSQVHAISAIIESFRWRE 170

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IY DNEFG+GI+P+LVDA QE++  + Y+S IS+ +T+D ++ +L  LM M TRVF+
Sbjct: 171 VVPIYADNEFGEGILPYLVDAFQEINVRIRYRSAISVHSTDDLVKKELYKLMTMPTRVFI 230

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHMLP L SRLF +AK+ GMM +GY WIV + I ++ +       ++M GVLG++ Y   
Sbjct: 231 VHMLPDLGSRLFSIAKEIGMMTKGYVWIVTNGIADQMSVMGESSLENMHGVLGVKTYFSR 290

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAA 220
            K L   +  W+KRF           ELN F  W YD A
Sbjct: 291 SKELMYLETRWRKRF--------GGEELNNFECWGYDTA 321

[Close]

BLAST of CsGy6G016550 vs. TAIR10
Match: AT5G11210.1 (glutamate receptor 2.5)

HSP 1 Score: 207.6 bits (527), Expect = 7.8e-54
Identity = 109/219 (49.77%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA FLI++G++++V IISFSAT P L S R  YF R T  DS QV+AI+AI+++F+WR+
Sbjct: 38  MQAPFLINLGNQSKVPIISFSATSPLLDSLRSPYFIRATHDDSSQVQAISAIIESFRWRE 97

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IYVDNEFG+GI+P LVDA QE++  + Y+S ISL  ++D+I+ +L  LM M TRVF+
Sbjct: 98  VVPIYVDNEFGEGILPNLVDAFQEINVRIRYRSAISLHYSDDQIKKELYKLMTMPTRVFI 157

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHMLP L SRLF +AK+  M+ +GY WIV + I +  +        +M GVLG++ Y   
Sbjct: 158 VHMLPDLGSRLFSIAKEIDMLSKGYVWIVTNGIADLMSIMGESSLVNMHGVLGVKTYFAK 217

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAA 220
            K L   +  WQKRF           ELN F  WAYDAA
Sbjct: 218 SKELLHLEARWQKRF--------GGEELNNFACWAYDAA 248

[Close]

BLAST of CsGy6G016550 vs. Swiss-Prot
Match: sp|Q9SHV1|GLR22_ARATH (Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 2.7e-56
Identity = 108/218 (49.54%), Postives = 152/218 (69.72%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA FLI++G K++V ++S+SAT PSLTS R  YFFR T  DS QV AI AI+K F WR+
Sbjct: 107 MQAHFLIEIGQKSRVPVVSYSATSPSLTSLRSPYFFRATYEDSSQVHAIKAIIKLFGWRE 166

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V +Y+DN FG+GI+P L D+LQ+++  + Y+SVI L AT+ +I ++L  +MNM TRVF+
Sbjct: 167 VVPVYIDNTFGEGIMPRLTDSLQDINVRIPYRSVIPLNATDQDISVELLKMMNMPTRVFI 226

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHM   LAS +FI AK+ G+M  GY WI+ + + +   S      ++M+GVLGI+ Y+P 
Sbjct: 227 VHMSSSLASTVFIKAKELGLMKPGYVWILTNGVMDGLRSINETGIEAMEGVLGIKTYIPK 286

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDA 219
            K LE+F+  W++RF +         ELNV+GLWAYDA
Sbjct: 287 SKDLETFRSRWKRRFPQM--------ELNVYGLWAYDA 316

[Close]

BLAST of CsGy6G016550 vs. Swiss-Prot
Match: sp|O04660|GLR21_ARATH (Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2)

HSP 1 Score: 214.5 bits (545), Expect = 1.2e-54
Identity = 107/218 (49.08%), Postives = 148/218 (67.89%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA F+I++G K+QV I+++SAT PSL S R  YFFR T  DS QV AI  I+K F WR+
Sbjct: 107 MQAQFMIEMGQKSQVPIVTYSATSPSLASIRSQYFFRATYDDSSQVHAIKEIIKLFGWRE 166

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +  +YVD+ FG+GI+P L D LQE++  + Y++VIS  AT+DEI ++L  +M + TRVFV
Sbjct: 167 VAPVYVDDTFGEGIMPRLTDVLQEINVRIPYRTVISPNATDDEISVELLRMMTLPTRVFV 226

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VH++  LASR F  A + G+M +GY WI+ + IT+  +       ++MQGVLG++ YVP 
Sbjct: 227 VHLVELLASRFFAKATEIGLMKQGYVWILTNTITDVLSIMNETEIETMQGVLGVKTYVPR 286

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDA 219
            K LE+F+  W KRF         I +LNV+GLWAYDA
Sbjct: 287 SKELENFRSRWTKRF--------PISDLNVYGLWAYDA 316

[Close]

BLAST of CsGy6G016550 vs. Swiss-Prot
Match: sp|Q9SHV2|GLR23_ARATH (Glutamate receptor 2.3 OS=Arabidopsis thaliana OX=3702 GN=GLR2.3 PE=2 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 2.0e-54
Identity = 106/218 (48.62%), Postives = 149/218 (68.35%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA FLI++G K++V I+S+SAT P LTS R  YF R T  DSFQV+ I AI+K F WR+
Sbjct: 106 MQAHFLIEIGQKSRVPIVSYSATSPILTSLRSPYFLRATYEDSFQVQPIKAIIKLFGWRE 165

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V +Y+DN FG+GI+P L DALQ+++  + Y+SVI++ AT+ EI ++L  +MNM TRVF+
Sbjct: 166 VVPVYIDNTFGEGIMPRLTDALQDINVRIPYRSVIAINATDHEISVELLKMMNMPTRVFL 225

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHM   LASR FI AK+ G+M  GY WI+ + + ++ +       ++M+GVLGI+ Y+P 
Sbjct: 226 VHMYYDLASRFFIKAKELGLMEPGYVWILTNGVIDDLSLINETAVEAMEGVLGIKTYIPK 285

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDA 219
              LE F+  W+  F R         EL+V+GLWAYDA
Sbjct: 286 SPDLEKFRSRWRSLFPRV--------ELSVYGLWAYDA 315

[Close]

BLAST of CsGy6G016550 vs. Swiss-Prot
Match: sp|Q9LFN8|GLR26_ARATH (Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2)

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-52
Identity = 106/219 (48.40%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA FLI++G+++QV IISFSA+ P L S R  YF R T  DS QV AI+AI+++F+WR+
Sbjct: 111 MQAPFLINLGNQSQVPIISFSASSPVLDSLRSPYFIRATHDDSSQVHAISAIIESFRWRE 170

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IY DNEFG+GI+P+LVDA QE++  + Y+S IS+ +T+D ++ +L  LM M TRVF+
Sbjct: 171 VVPIYADNEFGEGILPYLVDAFQEINVRIRYRSAISVHSTDDLVKKELYKLMTMPTRVFI 230

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHMLP L SRLF +AK+ GMM +GY WIV + I ++ +       ++M GVLG++ Y   
Sbjct: 231 VHMLPDLGSRLFSIAKEIGMMTKGYVWIVTNGIADQMSVMGESSLENMHGVLGVKTYFSR 290

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAA 220
            K L   +  W+KRF           ELN F  W YD A
Sbjct: 291 SKELMYLETRWRKRF--------GGEELNNFECWGYDTA 321

[Close]

BLAST of CsGy6G016550 vs. Swiss-Prot
Match: sp|Q9LFN5|GLR25_ARATH (Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2)

HSP 1 Score: 207.6 bits (527), Expect = 1.4e-52
Identity = 109/219 (49.77%), Postives = 146/219 (66.67%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA FLI++G++++V IISFSAT P L S R  YF R T  DS QV+AI+AI+++F+WR+
Sbjct: 112 MQAPFLINLGNQSKVPIISFSATSPLLDSLRSPYFIRATHDDSSQVQAISAIIESFRWRE 171

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IYVDNEFG+GI+P LVDA QE++  + Y+S ISL  ++D+I+ +L  LM M TRVF+
Sbjct: 172 VVPIYVDNEFGEGILPNLVDAFQEINVRIRYRSAISLHYSDDQIKKELYKLMTMPTRVFI 231

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHMLP L SRLF +AK+  M+ +GY WIV + I +  +        +M GVLG++ Y   
Sbjct: 232 VHMLPDLGSRLFSIAKEIDMLSKGYVWIVTNGIADLMSIMGESSLVNMHGVLGVKTYFAK 291

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAA 220
            K L   +  WQKRF           ELN F  WAYDAA
Sbjct: 292 SKELLHLEARWQKRF--------GGEELNNFACWAYDAA 322

[Close]

BLAST of CsGy6G016550 vs. TrEMBL
Match: tr|A0A1S4DVF3|A0A1S4DVF3_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488568 PE=3 SV=1)

HSP 1 Score: 378.3 bits (970), Expect = 1.2e-101
Identity = 189/221 (85.52%), Postives = 201/221 (90.95%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQASF+IDVGDKAQV IISFSATRPSLTSHR  +FFRI QADSFQVKAIAAIVKAFKWRK
Sbjct: 103 MQASFMIDVGDKAQVPIISFSATRPSLTSHRSPFFFRIAQADSFQVKAIAAIVKAFKWRK 162

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IYVDNEFGDGIIP+LVDALQEVDANV YQ++IS TATNDEIELKLSNLMN+QTRVFV
Sbjct: 163 VVPIYVDNEFGDGIIPYLVDALQEVDANVPYQTLISPTATNDEIELKLSNLMNLQTRVFV 222

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNS-KPLIFYQSMQGVLGIRNYVP 180
           VHMLP LASRLF +AKKKGMMGRG+ WIV DAITNEFNS +P I  QSMQGVLGI+ YVP
Sbjct: 223 VHMLPDLASRLFTMAKKKGMMGRGFAWIVTDAITNEFNSMEPSILDQSMQGVLGIKTYVP 282

Query: 181 GIKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
           G KRLESFKR WQ+RFL YYPTIEEIPELNVFGLWAYD AW
Sbjct: 283 GTKRLESFKRGWQRRFLSYYPTIEEIPELNVFGLWAYDTAW 323

[Close]

BLAST of CsGy6G016550 vs. TrEMBL
Match: tr|A0A1S3BCB6|A0A1S3BCB6_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488369 PE=3 SV=1)

HSP 1 Score: 306.6 bits (784), Expect = 4.5e-80
Identity = 148/220 (67.27%), Postives = 178/220 (80.91%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA+F+ID+GDKAQV IISFSATRPSLTSHR S+FFR+ Q DS QVKAI AIVK FKWRK
Sbjct: 117 MQANFMIDIGDKAQVPIISFSATRPSLTSHRSSFFFRVAQDDSSQVKAIGAIVKTFKWRK 176

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IYVDNEFGDGIIP+L+DALQEV+A+V YQS+IS   T+D +  +L  LM MQTRVFV
Sbjct: 177 VVPIYVDNEFGDGIIPYLIDALQEVNAHVPYQSIISPDVTDDHLTSELYKLMTMQTRVFV 236

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHML  LASR+F  AK+ GMM +GY WI+ D +TN   S     ++SMQGV+GI+ YVP 
Sbjct: 237 VHMLSDLASRIFTKAKQIGMMKKGYVWIITDGVTNMLESIKPSTFESMQGVIGIKTYVPR 296

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
            ++LESF+RDW+KRFL  YP +EE+PEL+VF LWAYDAAW
Sbjct: 297 TEKLESFERDWRKRFLGSYPKMEEVPELDVFALWAYDAAW 336

[Close]

BLAST of CsGy6G016550 vs. TrEMBL
Match: tr|A0A1S3BBW2|A0A1S3BBW2_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488371 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.3e-79
Identity = 154/220 (70.00%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA+F+ID+GDKA+V IISFSATRPSLTSHR S+FFR  Q DS QVKAI AIVK FKWR+
Sbjct: 123 MQANFMIDIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ 182

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IY DNEFGDGIIP L+DALQEVD +V YQS IS TAT+++I L+L  LM MQTRVFV
Sbjct: 183 VVPIYSDNEFGDGIIPDLIDALQEVDTDVPYQSKISPTATDEQISLELYKLMTMQTRVFV 242

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHML   ASRLF  AK+ GMM  GY WI+ DAI N  +       +SMQGVLGIR +VP 
Sbjct: 243 VHMLARDASRLFAKAKEIGMMKEGYVWIITDAIANPLDLIEPSILESMQGVLGIRTHVPK 302

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
            KRLE FK +W+KRF RYYPTIE+IPELNVFGLWAYDAAW
Sbjct: 303 SKRLEYFKLEWRKRFRRYYPTIEDIPELNVFGLWAYDAAW 342

[Close]

BLAST of CsGy6G016550 vs. TrEMBL
Match: tr|A0A1S3BCC2|A0A1S3BCC2_CUCME (Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488371 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 1.3e-79
Identity = 154/220 (70.00%), Postives = 175/220 (79.55%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQA+F+ID+GDKA+V IISFSATRPSLTSHR S+FFR  Q DS QVKAI AIVK FKWR+
Sbjct: 123 MQANFMIDIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIVKTFKWRQ 182

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IY DNEFGDGIIP L+DALQEVD +V YQS IS TAT+++I L+L  LM MQTRVFV
Sbjct: 183 VVPIYSDNEFGDGIIPDLIDALQEVDTDVPYQSKISPTATDEQISLELYKLMTMQTRVFV 242

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHML   ASRLF  AK+ GMM  GY WI+ DAI N  +       +SMQGVLGIR +VP 
Sbjct: 243 VHMLARDASRLFAKAKEIGMMKEGYVWIITDAIANPLDLIEPSILESMQGVLGIRTHVPK 302

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
            KRLE FK +W+KRF RYYPTIE+IPELNVFGLWAYDAAW
Sbjct: 303 SKRLEYFKLEWRKRFRRYYPTIEDIPELNVFGLWAYDAAW 342

[Close]

BLAST of CsGy6G016550 vs. TrEMBL
Match: tr|A0A0A0LSQ2|A0A0A0LSQ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G383920 PE=4 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 2.1e-77
Identity = 150/220 (68.18%), Postives = 174/220 (79.09%), Query Frame = 0


Query: 1   MQASFLIDVGDKAQVSIISFSATRPSLTSHRGSYFFRITQADSFQVKAIAAIVKAFKWRK 60
           MQASF+ID+GDKA+V IISFSATRPSLTSHR S+FFR  Q DS QVKAI AI+K FKWR+
Sbjct: 125 MQASFMIDIGDKAEVPIISFSATRPSLTSHRSSFFFRAAQNDSSQVKAIGAIIKTFKWRQ 184

Query: 61  IVSIYVDNEFGDGIIPFLVDALQEVDANVSYQSVISLTATNDEIELKLSNLMNMQTRVFV 120
           +V IY +NEFGDGIIP L++ALQEVD +V YQS IS TAT+++I  +L  LM MQTRVFV
Sbjct: 185 VVPIYSNNEFGDGIIPDLINALQEVDTDVPYQSKISPTATDEQIGHELYKLMTMQTRVFV 244

Query: 121 VHMLPPLASRLFIVAKKKGMMGRGYTWIVIDAITNEFNSKPLIFYQSMQGVLGIRNYVPG 180
           VHML   ASRLF  AK+ GMM  GY WI+ DAI N  +       +SMQGVLGIR +VP 
Sbjct: 245 VHMLARHASRLFAKAKEIGMMKEGYVWIITDAIGNTLDLIEPSVLESMQGVLGIRTHVPK 304

Query: 181 IKRLESFKRDWQKRFLRYYPTIEEIPELNVFGLWAYDAAW 221
            KRLE FK +W+KRF RYYPTIE+IP+LNVFGLWAYDAAW
Sbjct: 305 TKRLEGFKLEWRKRFRRYYPTIEDIPDLNVFGLWAYDAAW 344

The following BLAST results are available for this feature:

BLAST of CsGy6G016550 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_016899964.1	1.8e-101	85.52	PREDICTED: glutamate receptor 2.5-like [Cucumis melo]	[more]
XP_022951722.1	8.1e-81	68.64	glutamate receptor 2.5-like [Cucurbita moschata]	[more]
XP_008445295.1	6.8e-80	67.27	PREDICTED: glutamate receptor 2.5-like [Cucumis melo]	[more]
XP_008445300.1	2.0e-79	70.00	PREDICTED: glutamate receptor 2.1-like isoform X1 [Cucumis melo]	[more]
XP_008445301.1	2.0e-79	70.00	PREDICTED: glutamate receptor 2.8-like isoform X2 [Cucumis melo]	[more]

BLAST of CsGy6G016550 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G24720.1	1.5e-57	49.54	glutamate receptor 2.2	[more]
AT5G27100.1	6.4e-56	49.08	glutamate receptor 2.1	[more]
AT2G24710.1	1.1e-55	48.62	glutamate receptor 2.3	[more]
AT5G11180.1	6.0e-54	48.40	glutamate receptor 2.6	[more]
AT5G11210.1	7.8e-54	49.77	glutamate receptor 2.5	[more]

BLAST of CsGy6G016550 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SHV1\|GLR22_ARATH	2.7e-56	49.54	Glutamate receptor 2.2 OS=Arabidopsis thaliana OX=3702 GN=GLR2.2 PE=2 SV=1	[more]
sp\|O04660\|GLR21_ARATH	1.2e-54	49.08	Glutamate receptor 2.1 OS=Arabidopsis thaliana OX=3702 GN=GLR2.1 PE=2 SV=2	[more]
sp\|Q9SHV2\|GLR23_ARATH	2.0e-54	48.62	Glutamate receptor 2.3 OS=Arabidopsis thaliana OX=3702 GN=GLR2.3 PE=2 SV=1	[more]
sp\|Q9LFN8\|GLR26_ARATH	1.1e-52	48.40	Glutamate receptor 2.6 OS=Arabidopsis thaliana OX=3702 GN=GLR2.6 PE=2 SV=2	[more]
sp\|Q9LFN5\|GLR25_ARATH	1.4e-52	49.77	Glutamate receptor 2.5 OS=Arabidopsis thaliana OX=3702 GN=GLR2.5 PE=2 SV=2	[more]

BLAST of CsGy6G016550 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4DVF3\|A0A1S4DVF3_CUCME	1.2e-101	85.52	Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488568 PE=3 SV=1	[more]
tr\|A0A1S3BCB6\|A0A1S3BCB6_CUCME	4.5e-80	67.27	Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488369 PE=3 SV=1	[more]
tr\|A0A1S3BBW2\|A0A1S3BBW2_CUCME	1.3e-79	70.00	Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488371 PE=3 SV=1	[more]
tr\|A0A1S3BCC2\|A0A1S3BCC2_CUCME	1.3e-79	70.00	Glutamate receptor OS=Cucumis melo OX=3656 GN=LOC103488371 PE=3 SV=1	[more]
tr\|A0A0A0LSQ2\|A0A0A0LSQ2_CUCSA	2.1e-77	68.18	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G383920 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR028082	Peripla_BP_I
IPR001828	ANF_lig-bd_rcpt

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0035235	ionotropic glutamate receptor signaling pathway
biological_process	GO:0006811	ion transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0004970	ionotropic glutamate receptor activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G016550.1	CsGy6G016550.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001828	Receptor, ligand binding region	PFAM	PF01094	ANF_receptor	coord: 3..220 e-value: 1.4E-35 score: 122.9
None	No IPR available	GENE3D	G3DSA:3.40.50.2300		coord: 43..210 e-value: 1.6E-44 score: 153.8
None	No IPR available	PANTHER	PTHR43891	FAMILY NOT NAMED	coord: 1..220
None	No IPR available	PANTHER	PTHR43891:SF3	GLUTAMATE RECEPTOR 1.1-RELATED	coord: 1..220
None	No IPR available	CDD	cd06366	PBP1_GABAb_receptor	coord: 1..220 e-value: 1.14578E-72 score: 225.989
IPR028082	Periplasmic binding protein-like I	SUPERFAMILY	SSF53822	Periplasmic binding protein-like I	coord: 9..220

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G016550	Csa6G309940	Cucumber (Chinese Long) v2	cgybcuB281
CsGy6G016550	CSPI06G17070	Wild cucumber (PI 183967)	cgybcpiB287
CsGy6G016550	CsaV3_6G022440	Cucumber (Chinese Long) v3	cgybcucB298

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G016550	Cucumber (Chinese Long) v3	cgybcucB276
CsGy6G016550	Watermelon (97103) v2	cgybwmbB442
CsGy6G016550	Watermelon (97103) v2	cgybwmbB447
CsGy6G016550	Wax gourd	cgybwgoB524
CsGy6G016550	Wax gourd	cgybwgoB533
CsGy6G016550	Cucumber (Gy14) v2	cgybcgybB109
CsGy6G016550	Cucurbita maxima (Rimu)	cgybcmaB727
CsGy6G016550	Cucurbita maxima (Rimu)	cgybcmaB734
CsGy6G016550	Cucurbita maxima (Rimu)	cgybcmaB762
CsGy6G016550	Cucurbita maxima (Rimu)	cgybcmaB858
CsGy6G016550	Cucurbita maxima (Rimu)	cgybcmaB872
CsGy6G016550	Cucurbita moschata (Rifu)	cgybcmoB714
CsGy6G016550	Cucurbita moschata (Rifu)	cgybcmoB743
CsGy6G016550	Cucurbita moschata (Rifu)	cgybcmoB855
CsGy6G016550	Cucurbita pepo (Zucchini)	cgybcpeB731
CsGy6G016550	Cucurbita pepo (Zucchini)	cgybcpeB784
CsGy6G016550	Cucurbita pepo (Zucchini)	cgybcpeB817
CsGy6G016550	Cucurbita pepo (Zucchini)	cgybcpeB828
CsGy6G016550	Cucurbita pepo (Zucchini)	cgybcpeB887
CsGy6G016550	Cucumber (Chinese Long) v2	cgybcuB263
CsGy6G016550	Bottle gourd (USVL1VR-Ls)	cgyblsiB367
CsGy6G016550	Bottle gourd (USVL1VR-Ls)	cgyblsiB406
CsGy6G016550	Bottle gourd (USVL1VR-Ls)	cgyblsiB431
CsGy6G016550	Melon (DHL92) v3.5.1	cgybmeB382
CsGy6G016550	Melon (DHL92) v3.5.1	cgybmeB438
CsGy6G016550	Melon (DHL92) v3.6.1	cgybmedB384
CsGy6G016550	Melon (DHL92) v3.6.1	cgybmedB432
CsGy6G016550	Watermelon (Charleston Gray)	cgybwcgB436
CsGy6G016550	Watermelon (Charleston Gray)	cgybwcgB439
CsGy6G016550	Watermelon (97103) v1	cgybwmB464
CsGy6G016550	Watermelon (97103) v1	cgybwmB502
CsGy6G016550	Wild cucumber (PI 183967)	cgybcpiB270
CsGy6G016550	Silver-seed gourd	carcgybB0078
CsGy6G016550	Silver-seed gourd	carcgybB0079
CsGy6G016550	Silver-seed gourd	carcgybB0295
CsGy6G016550	Silver-seed gourd	carcgybB0701