CsGy6G016510 (gene) Cucumber (Gy14) v2

NameCsGy6G016510
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr6 : 15555791 .. 15557159 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCAACACAAGCAAAGCTATTGATACTGCAAGGTATAAGAGCAACGAGGTATTGATATTTCACTATGACACGTGCAGTTTTCCCATATTTTGTTCCATTTCAATCAACGCAACTTTAGATTTTTGTGATTTTAATAGATTTAAACATGAATGAGTCATGTTAGTACGTGTGTAACTGTTTGAAAAGTGAATTGATATCTAAAAACATTCTATTTAATTAGTTTTATACAGATATCCATTTTGTTAAGCTTTTTTTTACAACCAAAACCATTTATTGTAACCTTAACAAACCTGAGAACAACTAATTTCAACCATCAATAATTATTACATTTGGAATCCACTCACAACATGCAAATCATTAAAAATCAACAAACCAAAATAAAACAAATTTCACGAGCTAATATAACATATGAATTATTTATTTTATGACCACCATTAAAATGTTGTTCAAGCCTCTCATTATTTTTCACGTGTAATTTCAAATACAACATTTCAAATTTCATATTTTCAGTCAACTTTAAATTTAGTTTTATAATTTTTTCCTAAAATATTTGTAGCATTTATTCAAAATATACTCTAAACTATAGGAAATTATATTTTGTCTCGCATAAAATCAACACACTATCAACGAAATACAAAAATTAAATAAATTTGTAACCTCGAAGGATGATAAATAAAAAATAAACAAGAAAATTACCTTAAACAACAAAACTATTTAAAATGTTAAAAATAAATATACACACATAAGGTAGAAAAAATGGTAAAAAATATTTACATTAATTTTTGTTTTTAGTGATTTATTCGTAGGAGTTTTTCAAAAAAATAGAAAAAATAGATTTGTTCCACTTGATTTTTTTTGGTTATGAAGAGTAAATATTTTATTATTTTAAAAAAGGTGGTAAGTGAATGGTAAAAAGAAAAATAAAGAAAGAAATGTTATATTTTACCATACTTGTGAAGATTTACTTTACTATATTTGAAAAGAGGGCGAACAAAAAAGAAAAGTAAATGGAAGGATGAATAGGGCAATACATATGTGTGTTTGGGCAGCAAAAAGGCGCGTAAACTTGGGGGGCAAAGGGGAAAAGGAAAAAAAGAAAAAGAGCGCGTAAATTGACGCGATTATAATTGGGGAGAGTGGGTCAGTTTGTTATTTTACAAAAAATGAATGGCATTACTGAAAATTGAGCTTTTCTAATTCCAATATGCGGGTTTAGATATTTTTTTCCCTTTTTCCATCTTTTTCCTTACAGCACGAAAAGTGGAAAGAAACACACCGGAGAAGAAGGAGGAGCGAACAAGAAACACGAAGTAATACCAAAGATTCACCATTGAATAAACCTTTCACTCCCACCATCTTTGCCGTCTAG

mRNA sequence

GTCAACACAAGCAAAGCTATTGATACTGCAAGGTATAAGAGCAACGAGGTATTGATATTTCACTATGACACCAAAAAGGCGCGTAAACTTGGGGGGCAAAGGGGAAAAGGAAAAAAAGAAAAAGAGCGCCACGAAAAGTGGAAAGAAACACACCGGAGAAGAAGGAGGAGCGAACAAGAAACACGAAGTAATACCAAAGATTCACCATTGAATAAACCTTTCACTCCCACCATCTTTGCCGTCTAG

Coding sequence (CDS)

GTCAACACAAGCAAAGCTATTGATACTGCAAGGTATAAGAGCAACGAGGTATTGATATTTCACTATGACACCAAAAAGGCGCGTAAACTTGGGGGGCAAAGGGGAAAAGGAAAAAAAGAAAAAGAGCGCCACGAAAAGTGGAAAGAAACACACCGGAGAAGAAGGAGGAGCGAACAAGAAACACGAAGTAATACCAAAGATTCACCATTGAATAAACCTTTCACTCCCACCATCTTTGCCGTCTAG

Protein sequence

VNTSKAIDTARYKSNEVLIFHYDTKKARKLGGQRGKGKKEKERHEKWKETHRRRRRSEQETRSNTKDSPLNKPFTPTIFAV
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G016510.1CsGy6G016510.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..81
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 26..65

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G016510Cucumber (Gy14) v2cgybcgybB109
CsGy6G016510Cucurbita maxima (Rimu)cgybcmaB727
CsGy6G016510Cucurbita maxima (Rimu)cgybcmaB734
CsGy6G016510Cucurbita maxima (Rimu)cgybcmaB762
CsGy6G016510Cucurbita maxima (Rimu)cgybcmaB858
CsGy6G016510Cucurbita maxima (Rimu)cgybcmaB872
CsGy6G016510Cucurbita moschata (Rifu)cgybcmoB714
CsGy6G016510Cucurbita moschata (Rifu)cgybcmoB743
CsGy6G016510Cucurbita moschata (Rifu)cgybcmoB855
CsGy6G016510Cucurbita pepo (Zucchini)cgybcpeB731
CsGy6G016510Cucurbita pepo (Zucchini)cgybcpeB784
CsGy6G016510Cucurbita pepo (Zucchini)cgybcpeB817
CsGy6G016510Cucurbita pepo (Zucchini)cgybcpeB828
CsGy6G016510Cucurbita pepo (Zucchini)cgybcpeB887
CsGy6G016510Cucumber (Chinese Long) v2cgybcuB263
CsGy6G016510Cucumber (Chinese Long) v2cgybcuB281
CsGy6G016510Bottle gourd (USVL1VR-Ls)cgyblsiB367
CsGy6G016510Bottle gourd (USVL1VR-Ls)cgyblsiB406
CsGy6G016510Bottle gourd (USVL1VR-Ls)cgyblsiB431
CsGy6G016510Melon (DHL92) v3.5.1cgybmeB382
CsGy6G016510Melon (DHL92) v3.5.1cgybmeB438
CsGy6G016510Melon (DHL92) v3.6.1cgybmedB384
CsGy6G016510Melon (DHL92) v3.6.1cgybmedB432
CsGy6G016510Watermelon (Charleston Gray)cgybwcgB436
CsGy6G016510Watermelon (Charleston Gray)cgybwcgB439
CsGy6G016510Watermelon (97103) v1cgybwmB464
CsGy6G016510Watermelon (97103) v1cgybwmB502
CsGy6G016510Wild cucumber (PI 183967)cgybcpiB270
CsGy6G016510Wild cucumber (PI 183967)cgybcpiB287
CsGy6G016510Silver-seed gourdcarcgybB0078
CsGy6G016510Silver-seed gourdcarcgybB0079
CsGy6G016510Silver-seed gourdcarcgybB0295
CsGy6G016510Silver-seed gourdcarcgybB0701
CsGy6G016510Cucumber (Chinese Long) v3cgybcucB276
CsGy6G016510Cucumber (Chinese Long) v3cgybcucB298
CsGy6G016510Watermelon (97103) v2cgybwmbB442
CsGy6G016510Watermelon (97103) v2cgybwmbB447
CsGy6G016510Wax gourdcgybwgoB524
CsGy6G016510Wax gourdcgybwgoB533