CsGy6G013150 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G013150
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	protein disulfide isomerase-like 2-3
Location	Chr6 : 11545799 .. 11546965 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGCAGGTTCAACGTGCAAGGATTCCCTACCATCTTGGTGTTCGGTGCTGACAAGTACAGTCCAATTACGTATGAGGGTGCAAGAACAGCATCAGGAATCGAGTCATTTGCTTTAGACCAGCTAGAGACAAATGTTGCACCCCCAGAAGTGACGGAGCTCACTGGTTCTGTAAGTTGCTCGCTTGTTATGCTAACAGTAATTGGTTTGTGAAATATTTTATGATTATACACTTGGGAGTATGAATCTTATTGCCCCACTCCTATAGGACGTCATGGATGAGAAATGTGCATCGGCTGCCATTTGTTTTGTTGCTTTCCTGCCCGACATTTTGGATTCCAAGGCCGAAGGAAGGAACAGATACCTCAAGCAATTGTTATCAGTTGCCGAGAAGTTCAGAAGAAGTCCCTACAGGCAAGTTTATCTAAGATCACATACCATACCTCATACCTCTGCCCCATTCTTTAAACTTCTAACCCAAATTCTTGACTAATGGTTATCATATAGTCTTTCGTATGCTAATAGACATAATAATTTCAAAGACAATGTAGTTACACTTTGCAAAAAGCGCCACCGTGGTAATTACAATTATACCCTCAAGCTGAAAGAGAGTTCTTAACTTATTTTAACTCCTAATTAGTTTAGGGTTGAATTGTTACACTTAAAAGTTGGCAATTACTGCTGTACTTTGGGTGATTTTTGCTCCCATAGGAATGCGTATTGACGGTATATTACTCTGCAGCTATATTTGGGCAGCCGCCGGTAAGCAACCCGATCTTGAACAGCGTGTGGGAGTTGGTGGATATGGGTACCCTGCCTTGGTGGCTTTGAATGTGAAGAAAGGAGCATATGCTCCCCTTAAGAGTGCATTCGAGCTCGAGCATATTATGTAAGCTATAACTTCACATCCCTTCCCAATGTCCTCATCTTAAAAAATGTATAAAATGGCCTTTTTGTTAACATATGATTTGTTTCTCATACAACAGCGAGTTTGTAAAAGAAGCTGGCCGTGGAGGAAAAGGGAATTTGCCTCTAGAAAGCACTCCAGAAATTGTGAAGACAGAACCATGGGACGGTAAAGACGGCGAGGTTATCGAAGAAGATGAGTTTTCGCTGGAAGAGCTTATGGGAGGCGAAGATGAGACAGTAACTAAAGATGAGCTATGA

mRNA sequence

ATGAGCAGGTTCAACGTGCAAGGATTCCCTACCATCTTGGTGTTCGGTGCTGACAAGTACAGTCCAATTACGTATGAGGGTGCAAGAACAGCATCAGGAATCGAGTCATTTGCTTTAGACCAGCTAGAGACAAATGTTGCACCCCCAGAAGTGACGGAGCTCACTGGTTCTGACGTCATGGATGAGAAATGTGCATCGGCTGCCATTTGTTTTGTTGCTTTCCTGCCCGACATTTTGGATTCCAAGGCCGAAGGAAGGAACAGATACCTCAAGCAATTGTTATCAGTTGCCGAGAACTATATTTGGGCAGCCGCCGGTAAGCAACCCGATCTTGAACAGCGTGTGGGAGTTGGTGGATATGGGTACCCTGCCTTGGTGGCTTTGAATGTGAAGAAAGGAGCATATGCTCCCCTTAAGAGTGCATTCGAGCTCGAGCATATTATCGAGTTTGTAAAAGAAGCTGGCCGTGGAGGAAAAGGGAATTTGCCTCTAGAAAGCACTCCAGAAATTGTGAAGACAGAACCATGGGACGGTAAAGACGGCGAGGTTATCGAAGAAGATGAGTTTTCGCTGGAAGAGCTTATGGGAGGCGAAGATGAGACAGTAACTAAAGATGAGCTATGA

Coding sequence (CDS)

ATGAGCAGGTTCAACGTGCAAGGATTCCCTACCATCTTGGTGTTCGGTGCTGACAAGTACAGTCCAATTACGTATGAGGGTGCAAGAACAGCATCAGGAATCGAGTCATTTGCTTTAGACCAGCTAGAGACAAATGTTGCACCCCCAGAAGTGACGGAGCTCACTGGTTCTGACGTCATGGATGAGAAATGTGCATCGGCTGCCATTTGTTTTGTTGCTTTCCTGCCCGACATTTTGGATTCCAAGGCCGAAGGAAGGAACAGATACCTCAAGCAATTGTTATCAGTTGCCGAGAACTATATTTGGGCAGCCGCCGGTAAGCAACCCGATCTTGAACAGCGTGTGGGAGTTGGTGGATATGGGTACCCTGCCTTGGTGGCTTTGAATGTGAAGAAAGGAGCATATGCTCCCCTTAAGAGTGCATTCGAGCTCGAGCATATTATCGAGTTTGTAAAAGAAGCTGGCCGTGGAGGAAAAGGGAATTTGCCTCTAGAAAGCACTCCAGAAATTGTGAAGACAGAACCATGGGACGGTAAAGACGGCGAGGTTATCGAAGAAGATGAGTTTTCGCTGGAAGAGCTTATGGGAGGCGAAGATGAGACAGTAACTAAAGATGAGCTATGA

Protein sequence

MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVMDEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAENYIWAAAGKQPDLEQRVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKTEPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL

Homology

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BLAST of CsGy6G013150 vs. NCBI nr
Match: XP_004143192.1 (PREDICTED: protein disulfide isomerase-like 2-3 [Cucumis sativus] >KGN47008.1 hypothetical protein Csa_6G168250 [Cucumis sativus])

HSP 1 Score: 406.0 bits (1042), Expect = 7.7e-110
Identity = 206/214 (96.26%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM
Sbjct: 225 MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 284

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE       +YIWAAAGKQPDLEQ
Sbjct: 285 DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAEKFRRSPYSYIWAAAGKQPDLEQ 344

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT
Sbjct: 345 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 404

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL
Sbjct: 405 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 438

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BLAST of CsGy6G013150 vs. NCBI nr
Match: XP_008456396.1 (PREDICTED: protein disulfide isomerase-like 2-3 [Cucumis melo])

HSP 1 Score: 392.9 bits (1008), Expect = 6.8e-106
Identity = 199/214 (92.99%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFGADK SPI YEGARTAS IESFALDQLETNVAPPEVTELTGSDVM
Sbjct: 225 MSRFNVQGFPTILVFGADKDSPIPYEGARTASAIESFALDQLETNVAPPEVTELTGSDVM 284

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           DEKCASAAICFVAFLPDILDSKAEGRN+YL+QLLSVAE       +Y+WAAAGKQPDLE+
Sbjct: 285 DEKCASAAICFVAFLPDILDSKAEGRNKYLEQLLSVAEKFRRSPYSYVWAAAGKQPDLEK 344

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT
Sbjct: 345 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 404

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL
Sbjct: 405 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 438

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BLAST of CsGy6G013150 vs. NCBI nr
Match: XP_022149712.1 (protein disulfide isomerase-like 2-3 [Momordica charantia])

HSP 1 Score: 372.5 bits (955), Expect = 9.5e-100
Identity = 186/214 (86.92%), Postives = 199/214 (92.99%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFG+DK SPI YEGARTAS IESFAL+QL+TNVAPPEVTELTG DVM
Sbjct: 224 MSRFNVQGFPTILVFGSDKDSPIPYEGARTASAIESFALEQLDTNVAPPEVTELTGPDVM 283

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
            EKCA+AAICFVAFLPDILD+KAEGRN+YL+QLLSVAE       +Y+WAAAGKQPDLE 
Sbjct: 284 QEKCATAAICFVAFLPDILDTKAEGRNKYLQQLLSVAEKFKRSPYSYVWAAAGKQPDLEN 343

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALNVKKGAYAPLKSAFEL+HIIEFVKEAGRGGKGNLPLES+PEIVKT
Sbjct: 344 RVGVGGYGYPALVALNVKKGAYAPLKSAFELDHIIEFVKEAGRGGKGNLPLESSPEIVKT 403

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDGEVIEEDEFSLEELMGG ++ VTKDEL
Sbjct: 404 EPWDGKDGEVIEEDEFSLEELMGGAEDAVTKDEL 437

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BLAST of CsGy6G013150 vs. NCBI nr
Match: XP_022985968.1 (protein disulfide isomerase-like 2-3 [Cucurbita maxima])

HSP 1 Score: 369.4 bits (947), Expect = 8.0e-99
Identity = 185/208 (88.94%), Postives = 196/208 (94.23%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFGADK SPI YEGARTAS IESFAL+QLETNVAPPEVTELTG DVM
Sbjct: 225 MSRFNVQGFPTILVFGADKDSPIPYEGARTASEIESFALEQLETNVAPPEVTELTGPDVM 284

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           +EKCASAAICFVAFLPD+LD+KAEGRNRYL+QLLSVAE       +Y+WAAAGKQPDLE+
Sbjct: 285 EEKCASAAICFVAFLPDVLDTKAEGRNRYLEQLLSVAEKFRRSPYSYVWAAAGKQPDLEK 344

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
            VGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLES+P+IVKT
Sbjct: 345 HVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESSPDIVKT 404

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDET 202
           EPWDGKDGEVIEEDEFSLEELMGGE+ET
Sbjct: 405 EPWDGKDGEVIEEDEFSLEELMGGENET 432

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BLAST of CsGy6G013150 vs. NCBI nr
Match: XP_022947369.1 (protein disulfide isomerase-like 2-3 [Cucurbita moschata])

HSP 1 Score: 369.0 bits (946), Expect = 1.0e-98
Identity = 184/215 (85.58%), Postives = 201/215 (93.49%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFGADK +P+ YEG RTAS IESFAL+QL+TNVAPPEVTELTG DVM
Sbjct: 225 MSRFNVQGFPTILVFGADKDTPVPYEGTRTASAIESFALEQLDTNVAPPEVTELTGPDVM 284

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           +EKCASAAICFVAFLPDILD+KAEGRN+YL+QLLSVAE       +Y+WAAAGKQPDLE+
Sbjct: 285 EEKCASAAICFVAFLPDILDTKAEGRNKYLEQLLSVAEKFRRSPYSYVWAAAGKQPDLEK 344

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALNVKKGAYAPLKSAFEL H++EFVKEAGRGGKGNLPLES+PEIVKT
Sbjct: 345 RVGVGGYGYPALVALNVKKGAYAPLKSAFELAHVVEFVKEAGRGGKGNLPLESSPEIVKT 404

Query: 181 EPWDGKDGEVIEEDEFSLEELM-GGEDETVTKDEL 208
           EPWDGKDGEVIEEDEFSLEELM GGED++V+KDEL
Sbjct: 405 EPWDGKDGEVIEEDEFSLEELMGGGEDDSVSKDEL 439

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BLAST of CsGy6G013150 vs. TAIR10
Match: AT1G04980.1 (PDI-like 2-2)

HSP 1 Score: 319.7 bits (818), Expect = 1.3e-87
Identity = 156/215 (72.56%), Postives = 184/215 (85.58%), Query Frame = 0


Query: 2   SRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVMD 61
           SRF VQGFPTILVFG+DK SP+ YEGAR+AS IESFAL+QLE+N  P EVTELTG DVM+
Sbjct: 233 SRFKVQGFPTILVFGSDKSSPVPYEGARSASAIESFALEQLESNAGPAEVTELTGPDVME 292

Query: 62  EKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQR 121
           +KC SAAICFV+FLPDILDSKAEGRN+YL+ LLSVA+        ++W AAGKQPDLE+R
Sbjct: 293 DKCGSAAICFVSFLPDILDSKAEGRNKYLEMLLSVADKFKKDPYGFVWVAAGKQPDLEKR 352

Query: 122 VGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKTE 181
           VGVGGYGYPA+VALN KKGAYAPLKS FE++H+ +FVKEA +GGKGNLP++ T EIVKTE
Sbjct: 353 VGVGGYGYPAMVALNAKKGAYAPLKSGFEVKHLKDFVKEAAKGGKGNLPIDGTMEIVKTE 412

Query: 182 PWDGKDGEVIEEDEFSLEELMGGEDE--TVTKDEL 208
            WDGKDGEV++ DEFSLE+LMG +DE  T +KD+L
Sbjct: 413 AWDGKDGEVVDADEFSLEDLMGNDDEASTESKDDL 447

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BLAST of CsGy6G013150 vs. TAIR10
Match: AT2G32920.1 (PDI-like 2-3)

HSP 1 Score: 311.2 bits (796), Expect = 4.7e-85
Identity = 152/214 (71.03%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRF VQGFPTILVFG DK SP  YEGAR+AS IESFA + +E++  P EVTELTG DVM
Sbjct: 227 MSRFKVQGFPTILVFGPDKSSPYPYEGARSASAIESFASELVESSAGPVEVTELTGPDVM 286

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           ++KC SAAICF++FLPDILDSKAEGRN+YL+ LLSVAE       +++W AA  Q DLE+
Sbjct: 287 EKKCGSAAICFISFLPDILDSKAEGRNKYLEMLLSVAEKFKKQPYSFMWVAAVTQMDLEK 346

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RV VGGYGYPA+VA+NVKKG YAPLKSAFEL+H++EFVK+AG GGKGN+P+  TPEIVKT
Sbjct: 347 RVNVGGYGYPAMVAMNVKKGVYAPLKSAFELQHLLEFVKDAGTGGKGNVPMNGTPEIVKT 406

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           + WDGKDGE+IEEDEFSL+ELMGG+D   +KDEL
Sbjct: 407 KEWDGKDGELIEEDEFSLDELMGGDDAVGSKDEL 440

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BLAST of CsGy6G013150 vs. Swiss-Prot
Match: sp|Q67UF5|PDI23_ORYSJ (Protein disulfide isomerase-like 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN=PDIL2-3 PE=2 SV=1)

HSP 1 Score: 321.6 bits (823), Expect = 6.3e-87
Identity = 160/214 (74.77%), Postives = 183/214 (85.51%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MS++ V+GFPTILVFGADK SP  Y+GAR AS IESFAL+QLE N APPEV+ELTG D M
Sbjct: 230 MSKYKVEGFPTILVFGADKESPFPYQGARVASAIESFALEQLEANAAPPEVSELTGPDAM 289

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           +EKCASAAICFV+FLPDILDSKAEGRN+YL+ LLSVAE       +++W AAGKQ DLE+
Sbjct: 290 EEKCASAAICFVSFLPDILDSKAEGRNKYLELLLSVAEKFKKSPYSFVWTAAGKQADLEK 349

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           +VGVGGYGYPA+VALNVKKGAYAPL+SAF+L+ I EFVKEAGRGGKGNLPL+ TP IV++
Sbjct: 350 QVGVGGYGYPAMVALNVKKGAYAPLRSAFQLDEITEFVKEAGRGGKGNLPLDGTPTIVQS 409

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDGEVIEEDEFSLEELM   D +   DEL
Sbjct: 410 EPWDGKDGEVIEEDEFSLEELMA--DNSPVNDEL 441

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BLAST of CsGy6G013150 vs. Swiss-Prot
Match: sp|Q9MAU6|PDI22_ARATH (Protein disulfide-isomerase like 2-2 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-2 PE=2 SV=2)

HSP 1 Score: 319.7 bits (818), Expect = 2.4e-86
Identity = 156/215 (72.56%), Postives = 184/215 (85.58%), Query Frame = 0


Query: 2   SRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVMD 61
           SRF VQGFPTILVFG+DK SP+ YEGAR+AS IESFAL+QLE+N  P EVTELTG DVM+
Sbjct: 233 SRFKVQGFPTILVFGSDKSSPVPYEGARSASAIESFALEQLESNAGPAEVTELTGPDVME 292

Query: 62  EKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQR 121
           +KC SAAICFV+FLPDILDSKAEGRN+YL+ LLSVA+        ++W AAGKQPDLE+R
Sbjct: 293 DKCGSAAICFVSFLPDILDSKAEGRNKYLEMLLSVADKFKKDPYGFVWVAAGKQPDLEKR 352

Query: 122 VGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKTE 181
           VGVGGYGYPA+VALN KKGAYAPLKS FE++H+ +FVKEA +GGKGNLP++ T EIVKTE
Sbjct: 353 VGVGGYGYPAMVALNAKKGAYAPLKSGFEVKHLKDFVKEAAKGGKGNLPIDGTMEIVKTE 412

Query: 182 PWDGKDGEVIEEDEFSLEELMGGEDE--TVTKDEL 208
            WDGKDGEV++ DEFSLE+LMG +DE  T +KD+L
Sbjct: 413 AWDGKDGEVVDADEFSLEDLMGNDDEASTESKDDL 447

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BLAST of CsGy6G013150 vs. Swiss-Prot
Match: sp|O48773|PDI23_ARATH (Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-3 PE=2 SV=1)

HSP 1 Score: 311.2 bits (796), Expect = 8.5e-84
Identity = 152/214 (71.03%), Postives = 180/214 (84.11%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRF VQGFPTILVFG DK SP  YEGAR+AS IESFA + +E++  P EVTELTG DVM
Sbjct: 227 MSRFKVQGFPTILVFGPDKSSPYPYEGARSASAIESFASELVESSAGPVEVTELTGPDVM 286

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           ++KC SAAICF++FLPDILDSKAEGRN+YL+ LLSVAE       +++W AA  Q DLE+
Sbjct: 287 EKKCGSAAICFISFLPDILDSKAEGRNKYLEMLLSVAEKFKKQPYSFMWVAAVTQMDLEK 346

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RV VGGYGYPA+VA+NVKKG YAPLKSAFEL+H++EFVK+AG GGKGN+P+  TPEIVKT
Sbjct: 347 RVNVGGYGYPAMVAMNVKKGVYAPLKSAFELQHLLEFVKDAGTGGKGNVPMNGTPEIVKT 406

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           + WDGKDGE+IEEDEFSL+ELMGG+D   +KDEL
Sbjct: 407 KEWDGKDGELIEEDEFSLDELMGGDDAVGSKDEL 440

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BLAST of CsGy6G013150 vs. Swiss-Prot
Match: sp|Q15084|PDIA6_HUMAN (Protein disulfide-isomerase A6 OS=Homo sapiens OX=9606 GN=PDIA6 PE=1 SV=1)

HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40
Identity = 91/215 (42.33%), Postives = 129/215 (60.00%), Query Frame = 0


Query: 2   SRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVMD 61
           SR+ ++GFPTI +F   + SP+ Y+G RT S I S ALD    N  PPE+ E+   D+  
Sbjct: 230 SRYGIRGFPTIKIFQKGE-SPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAK 289

Query: 62  EKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAENY-------IWAAAGKQPDLEQR 121
             C    +C VA LP ILD+ A GRN YL+ LL +A+ Y       +W  AG Q +LE  
Sbjct: 290 RTCEEHQLCVVAVLPHILDTGAAGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQSELETA 349

Query: 122 VGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEA--GRGGKGNLPLESTPEIVK 181
           +G+GG+GYPA+ A+N +K  +A LK +F  + I EF++E   GRG    +   + P IV+
Sbjct: 350 LGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGAFPTIVE 409

Query: 182 TEPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
            EPWDG+DGE+  ED+  L ++   E + + KDEL
Sbjct: 410 REPWDGRDGELPVEDDIDLSDV---ELDDLGKDEL 440

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BLAST of CsGy6G013150 vs. Swiss-Prot
Match: sp|Q63081|PDIA6_RAT (Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2)

HSP 1 Score: 166.8 bits (421), Expect = 2.6e-40
Identity = 87/202 (43.07%), Postives = 121/202 (59.90%), Query Frame = 0


Query: 2   SRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVMD 61
           SR+ ++GFPTI +F   + SP+ Y+G RT S I S ALD    N  PPE+ E+   D+  
Sbjct: 230 SRYGIKGFPTIKIFQKGE-SPVDYDGGRTRSDIVSRALDLFSDNAPPPELLEIINEDIAK 289

Query: 62  EKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAENY-------IWAAAGKQPDLEQR 121
           + C    +C VA LP ILD+ A GRN YL+ LL +A+ Y       +W  AG Q +LE  
Sbjct: 290 KTCEEHQLCVVAVLPHILDTGATGRNSYLEVLLKLADKYKKKMWGWLWTEAGAQYELENA 349

Query: 122 VGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEA--GRGGKGNLPLESTPEIVK 181
           +G+GG+GYPA+ A+N +K  +A LK +F  + I EF++E   GRG    +   S P I  
Sbjct: 350 LGIGGFGYPAMAAINARKMKFALLKGSFSEQGINEFLRELSFGRGSTAPVGGGSFPNITP 409

Query: 182 TEPWDGKDGEVIEEDEFSLEEL 195
            EPWDGKDGE+  ED+  L ++
Sbjct: 410 REPWDGKDGELPVEDDIDLSDV 430

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BLAST of CsGy6G013150 vs. TrEMBL
Match: tr|A0A0A0KC07|A0A0A0KC07_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168250 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 5.1e-110
Identity = 206/214 (96.26%), Postives = 207/214 (96.73%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM
Sbjct: 225 MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 284

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE       +YIWAAAGKQPDLEQ
Sbjct: 285 DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAEKFRRSPYSYIWAAAGKQPDLEQ 344

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT
Sbjct: 345 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 404

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL
Sbjct: 405 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 438

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BLAST of CsGy6G013150 vs. TrEMBL
Match: tr|A0A1S3C3U1|A0A1S3C3U1_CUCME (protein disulfide isomerase-like 2-3 OS=Cucumis melo OX=3656 GN=LOC103496347 PE=3 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 4.5e-106
Identity = 199/214 (92.99%), Postives = 204/214 (95.33%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFGADK SPI YEGARTAS IESFALDQLETNVAPPEVTELTGSDVM
Sbjct: 225 MSRFNVQGFPTILVFGADKDSPIPYEGARTASAIESFALDQLETNVAPPEVTELTGSDVM 284

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           DEKCASAAICFVAFLPDILDSKAEGRN+YL+QLLSVAE       +Y+WAAAGKQPDLE+
Sbjct: 285 DEKCASAAICFVAFLPDILDSKAEGRNKYLEQLLSVAEKFRRSPYSYVWAAAGKQPDLEK 344

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT
Sbjct: 345 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 404

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL
Sbjct: 405 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 438

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BLAST of CsGy6G013150 vs. TrEMBL
Match: tr|B9IAL5|B9IAL5_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G160000v3 PE=3 SV=2)

HSP 1 Score: 357.8 bits (917), Expect = 1.6e-95
Identity = 180/214 (84.11%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFGADK +PI YEGARTAS IESFAL+QLE+NVAPPEVTELTG DVM
Sbjct: 223 MSRFNVQGFPTILVFGADKDTPIPYEGARTASAIESFALEQLESNVAPPEVTELTGPDVM 282

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           +EKC SAAICFVAFLPDILDSKAEGRN+YL+QLLSVAE       +Y+WAAAGKQPDLE 
Sbjct: 283 EEKCGSAAICFVAFLPDILDSKAEGRNKYLEQLLSVAEKFKRSPYSYVWAAAGKQPDLEN 342

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALN KKGAYAPLKSAFELEHI+EFVKEAGRGGKGNLPL   PEIVKT
Sbjct: 343 RVGVGGYGYPALVALNAKKGAYAPLKSAFELEHIVEFVKEAGRGGKGNLPLNGNPEIVKT 402

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDGE+IEEDEFSLEELMG  ++  +KDEL
Sbjct: 403 EPWDGKDGEIIEEDEFSLEELMG--EDAGSKDEL 434

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BLAST of CsGy6G013150 vs. TrEMBL
Match: tr|A0A2K1XWP0|A0A2K1XWP0_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G160000v3 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.6e-95
Identity = 180/214 (84.11%), Postives = 193/214 (90.19%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTILVFGADK +PI YEGARTAS IESFAL+QLE+NVAPPEVTELTG DVM
Sbjct: 143 MSRFNVQGFPTILVFGADKDTPIPYEGARTASAIESFALEQLESNVAPPEVTELTGPDVM 202

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           +EKC SAAICFVAFLPDILDSKAEGRN+YL+QLLSVAE       +Y+WAAAGKQPDLE 
Sbjct: 203 EEKCGSAAICFVAFLPDILDSKAEGRNKYLEQLLSVAEKFKRSPYSYVWAAAGKQPDLEN 262

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALN KKGAYAPLKSAFELEHI+EFVKEAGRGGKGNLPL   PEIVKT
Sbjct: 263 RVGVGGYGYPALVALNAKKGAYAPLKSAFELEHIVEFVKEAGRGGKGNLPLNGNPEIVKT 322

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDGE+IEEDEFSLEELMG  ++  +KDEL
Sbjct: 323 EPWDGKDGEIIEEDEFSLEELMG--EDAGSKDEL 354

[Close]

BLAST of CsGy6G013150 vs. TrEMBL
Match: tr|M5XBU1|M5XBU1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G208600 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 2.1e-95
Identity = 177/214 (82.71%), Postives = 192/214 (89.72%), Query Frame = 0


Query: 1   MSRFNVQGFPTILVFGADKYSPITYEGARTASGIESFALDQLETNVAPPEVTELTGSDVM 60
           MSRFNVQGFPTIL+FGADK +P+ YEGARTA  IESFAL+QLETNVAP EVTELTG DVM
Sbjct: 250 MSRFNVQGFPTILIFGADKDTPLPYEGARTAKAIESFALEQLETNVAPAEVTELTGPDVM 309

Query: 61  DEKCASAAICFVAFLPDILDSKAEGRNRYLKQLLSVAE-------NYIWAAAGKQPDLEQ 120
           +EKC SAAICFVAFLPDILDSKAEGRN+Y++QLLSVAE       +Y+WAAAGKQPDLE 
Sbjct: 310 EEKCGSAAICFVAFLPDILDSKAEGRNKYIQQLLSVAEKFKRSPYSYVWAAAGKQPDLEN 369

Query: 121 RVGVGGYGYPALVALNVKKGAYAPLKSAFELEHIIEFVKEAGRGGKGNLPLESTPEIVKT 180
           RVGVGGYGYPALVALNVKKGAYAPLKSAFEL+ IIEFVKEAGRGGKGNLPL+ TP I K 
Sbjct: 370 RVGVGGYGYPALVALNVKKGAYAPLKSAFELDQIIEFVKEAGRGGKGNLPLDGTPNISKI 429

Query: 181 EPWDGKDGEVIEEDEFSLEELMGGEDETVTKDEL 208
           EPWDGKDG++IEEDEFSLEELMGG DET +KDEL
Sbjct: 430 EPWDGKDGQIIEEDEFSLEELMGGGDETTSKDEL 463

The following BLAST results are available for this feature:

BLAST of CsGy6G013150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143192.1	7.7e-110	96.26	PREDICTED: protein disulfide isomerase-like 2-3 [Cucumis sativus] >KGN47008.1 hy...	[more]
XP_008456396.1	6.8e-106	92.99	PREDICTED: protein disulfide isomerase-like 2-3 [Cucumis melo]	[more]
XP_022149712.1	9.5e-100	86.92	protein disulfide isomerase-like 2-3 [Momordica charantia]	[more]
XP_022985968.1	8.0e-99	88.94	protein disulfide isomerase-like 2-3 [Cucurbita maxima]	[more]
XP_022947369.1	1.0e-98	85.58	protein disulfide isomerase-like 2-3 [Cucurbita moschata]	[more]

BLAST of CsGy6G013150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G04980.1	1.3e-87	72.56	PDI-like 2-2	[more]
AT2G32920.1	4.7e-85	71.03	PDI-like 2-3	[more]

BLAST of CsGy6G013150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q67UF5\|PDI23_ORYSJ	6.3e-87	74.77	Protein disulfide isomerase-like 2-3 OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]
sp\|Q9MAU6\|PDI22_ARATH	2.4e-86	72.56	Protein disulfide-isomerase like 2-2 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-2 ...	[more]
sp\|O48773\|PDI23_ARATH	8.5e-84	71.03	Protein disulfide-isomerase 2-3 OS=Arabidopsis thaliana OX=3702 GN=PDIL2-3 PE=2 ...	[more]
sp\|Q15084\|PDIA6_HUMAN	1.5e-40	42.33	Protein disulfide-isomerase A6 OS=Homo sapiens OX=9606 GN=PDIA6 PE=1 SV=1	[more]
sp\|Q63081\|PDIA6_RAT	2.6e-40	43.07	Protein disulfide-isomerase A6 OS=Rattus norvegicus OX=10116 GN=Pdia6 PE=1 SV=2	[more]

BLAST of CsGy6G013150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KC07\|A0A0A0KC07_CUCSA	5.1e-110	96.26	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G168250 PE=3 SV=1	[more]
tr\|A0A1S3C3U1\|A0A1S3C3U1_CUCME	4.5e-106	92.99	protein disulfide isomerase-like 2-3 OS=Cucumis melo OX=3656 GN=LOC103496347 PE=...	[more]
tr\|B9IAL5\|B9IAL5_POPTR	1.6e-95	84.11	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G160000v3 PE=...	[more]
tr\|A0A2K1XWP0\|A0A2K1XWP0_POPTR	1.6e-95	84.11	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_014G160000v3 PE=...	[more]
tr\|M5XBU1\|M5XBU1_PRUPE	2.1e-95	82.71	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G208600 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR036249	Thioredoxin-like_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045454	cell redox homeostasis
biological_process	GO:0006457	protein folding
biological_process	GO:0034976	response to endoplasmic reticulum stress
cellular_component	GO:0005788	endoplasmic reticulum lumen
molecular_function	GO:0003756	protein disulfide isomerase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G013150.1	CsGy6G013150.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.30.10		coord: 1..43 e-value: 1.8E-6 score: 30.2
None	No IPR available	PANTHER	PTHR18929	PROTEIN DISULFIDE ISOMERASE	coord: 3..143
None	No IPR available	PANTHER	PTHR18929:SF65	SUBFAMILY NOT NAMED	coord: 3..143
None	No IPR available	CDD	cd02983	P5_C	coord: 48..170 e-value: 6.95008E-57 score: 177.543
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 2..43
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	SSF52833	Thioredoxin-like	coord: 48..156

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G013150	Cucurbita maxima (Rimu)	cgybcmaB792
CsGy6G013150	Cucumber (Gy14) v2	cgybcgybB152
CsGy6G013150	Cucurbita maxima (Rimu)	cgybcmaB709
CsGy6G013150	Cucurbita maxima (Rimu)	cgybcmaB781
CsGy6G013150	Cucurbita maxima (Rimu)	cgybcmaB821
CsGy6G013150	Cucurbita moschata (Rifu)	cgybcmoB692
CsGy6G013150	Cucurbita moschata (Rifu)	cgybcmoB760
CsGy6G013150	Cucurbita moschata (Rifu)	cgybcmoB770
CsGy6G013150	Cucurbita moschata (Rifu)	cgybcmoB801
CsGy6G013150	Cucurbita pepo (Zucchini)	cgybcpeB770
CsGy6G013150	Cucurbita pepo (Zucchini)	cgybcpeB839
CsGy6G013150	Cucurbita pepo (Zucchini)	cgybcpeB847
CsGy6G013150	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G013150	Cucumber (Chinese Long) v2	cgybcuB286
CsGy6G013150	Bottle gourd (USVL1VR-Ls)	cgyblsiB381
CsGy6G013150	Bottle gourd (USVL1VR-Ls)	cgyblsiB394
CsGy6G013150	Melon (DHL92) v3.5.1	cgybmeB383
CsGy6G013150	Melon (DHL92) v3.5.1	cgybmeB434
CsGy6G013150	Melon (DHL92) v3.6.1	cgybmedB369
CsGy6G013150	Melon (DHL92) v3.6.1	cgybmedB429
CsGy6G013150	Watermelon (Charleston Gray)	cgybwcgB404
CsGy6G013150	Watermelon (97103) v1	cgybwmB481
CsGy6G013150	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G013150	Wild cucumber (PI 183967)	cgybcpiB291
CsGy6G013150	Silver-seed gourd	carcgybB0026
CsGy6G013150	Silver-seed gourd	carcgybB0353
CsGy6G013150	Silver-seed gourd	carcgybB0399
CsGy6G013150	Silver-seed gourd	carcgybB0539
CsGy6G013150	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G013150	Cucumber (Chinese Long) v3	cgybcucB302
CsGy6G013150	Watermelon (97103) v2	cgybwmbB409
CsGy6G013150	Wax gourd	cgybwgoB580
CsGy6G013150	Wax gourd	cgybwgoB542