CsGy6G012780 (gene) Cucumber (Gy14) v2

NameCsGy6G012780
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUncharacterized protein
LocationChr6 : 11001379 .. 11001580 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGTCAGGTGTGGTGTTTTTATGAAGATCAACATTCAAGGTTTTGCTCAAGAGAGCTCGCAGGGAATGGGAGGAAGGTGATGGAGAGTGGCGATGGAGGTGCAACAGCAGGTTATGTGGAAGAGAGGGATGGCGATGCAGCCTACTCCCACATTCTACATCTATATCTATATCATGTGATGGTGGAGGAAGAAGAATAG

mRNA sequence

ATGGGGTCAGATCAACATTCAAGGTTTTGCTCAAGAGAGCTCGCAGGGAATGGGAGGAAGGTGATGGAGAGTGGCGATGGAGGTGCAACAGCAGGTTATGTGGAAGAGAGGGATGGCGATGCAGCCTACTCCCACATTCTACATCTATATCTATATCATGTGATGGTGGAGGAAGAAGAATAG

Coding sequence (CDS)

ATGGGGTCAGATCAACATTCAAGGTTTTGCTCAAGAGAGCTCGCAGGGAATGGGAGGAAGGTGATGGAGAGTGGCGATGGAGGTGCAACAGCAGGTTATGTGGAAGAGAGGGATGGCGATGCAGCCTACTCCCACATTCTACATCTATATCTATATCATGTGATGGTGGAGGAAGAAGAATAG

Protein sequence

MGSDQHSRFCSRELAGNGRKVMESGDGGATAGYVEERDGDAAYSHILHLYLYHVMVEEEE
BLAST of CsGy6G012780 vs. NCBI nr
Match: KGN46968.1 (hypothetical protein Csa_6G154000 [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 1.6e-23
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 2  GSDQHSRFCSRELAGNGRKVMESGDGGATAGYVEERDGDAAYSHILHLYLYHVMVEEEE 61
          G  QHSRFCSRELAGNGRKVMESGDGGATAGYVEERDGDAAYSHILHLYLYHVMVEEEE
Sbjct: 6  GIAQHSRFCSRELAGNGRKVMESGDGGATAGYVEERDGDAAYSHILHLYLYHVMVEEEE 64

BLAST of CsGy6G012780 vs. TrEMBL
Match: tr|A0A0A0KBV1|A0A0A0KBV1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G154000 PE=4 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-23
Identity = 57/59 (96.61%), Postives = 57/59 (96.61%), Query Frame = 0

Query: 2  GSDQHSRFCSRELAGNGRKVMESGDGGATAGYVEERDGDAAYSHILHLYLYHVMVEEEE 61
          G  QHSRFCSRELAGNGRKVMESGDGGATAGYVEERDGDAAYSHILHLYLYHVMVEEEE
Sbjct: 6  GIAQHSRFCSRELAGNGRKVMESGDGGATAGYVEERDGDAAYSHILHLYLYHVMVEEEE 64

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KGN46968.11.6e-2396.61hypothetical protein Csa_6G154000 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A0A0KBV1|A0A0A0KBV1_CUCSA1.1e-2396.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G154000 PE=4 SV=1[more]
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G012780.1CsGy6G012780.1mRNA


The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
CsGy6G012780Csa6G154000Cucumber (Chinese Long) v2cgybcuB282
CsGy6G012780CSPI06G12670Wild cucumber (PI 183967)cgybcpiB288
CsGy6G012780CsaV3_6G015140Cucumber (Chinese Long) v3cgybcucB298
The following gene(s) are paralogous to this gene:

None