CsGy6G012700 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G012700
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionProtein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1
LocationChr6 : 10960904 .. 10961768 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTTGTGATAGCGCTCCATCCATCACGTTAATCGATGAAATAGATTACTTGTGCGGTCGAGGAGGTGAATGTAATGAAAATGAAGCTTTTAGACGTATCAAGACAGAACTTCTTATGCAAATGCAAGTATGGTGTTTGTGAAGCAACAATATTTACACAGTAAAAAGAGAGGGATTTATTACCATCTTGTCTTATGTTTCTTGTGCCTTTTTTCATTGTCTTAGCGAATGCTTATTTGCGGAAGATACCTTTTCAGGAAATAACGTTTCAAAACTATATATCTCTTTGCATCTGTAGGGTGTAGGACACAACGATAATAAAATTCTTGTTTTTGCTACAACACAATACACCCTATGCTTTGGATCAGGTCAAGAGAGAATATGTATACTTCCATATTATGCTAAGGATTAAGGAAACACAATGCATGTTTGATTTATAAGTAGTGTTTTCAGGCCATTCGTCGACAATTTGACGAACGGATATACATCCCTCTTCCTGATTTGAACGCAAGGCAATATATATTCAAAGTACTGAAAGTTACATTTTCTCTTCATCTATACATAGTTCCTTTTTTTTTTCCTTGGGGGTAAGAAATAAGCTTTGTTAATGTGCCTATTTAAATAGGTGCATTTAGGCGATACTCCAAATAATTTGACAGAAGGAGGTTTTGAAAGCTTGACACTTAGAACAGAAGGTTTTTCAGGCTCAAATATTTCAGTTTGTGCGAGTGTACAATATTATTTGTGTGGATTGAATTCTTATTGTTGGTGTTTTGTCATTCCTTTTAGTCCATAGGTAGTTCATGCACCCCTTGAACTGGCAGGTGAAGGATGTGCTCTCCCAACGTATATTCATGTCTTAA

mRNA sequence

ATGGCTTGTGATAGCGCTCCATCCATCACGTTAATCGATGAAATAGATTACTTGTGCGGTCGAGGAGGTGAATGTAATGAAAATGAAGCTTTTAGACGTATCAAGACAGAACTTCTTATGCAAATGCAAGGTGTAGGACACAACGATAATAAAATTCTTGTTTTTGCTACAACACAATACACCCTATGCTTTGGATCAGGCGATACTCCAAATAATTTGACAGAAGGAGGTTTTGAAAGCTTGACACTTAGAACAGAAGGTTTTTCAGGCTCAAATATTTCAGTTTGTGCGAGTGTGAAGGATGTGCTCTCCCAACGTATATTCATGTCTTAA

Coding sequence (CDS)

ATGGCTTGTGATAGCGCTCCATCCATCACGTTAATCGATGAAATAGATTACTTGTGCGGTCGAGGAGGTGAATGTAATGAAAATGAAGCTTTTAGACGTATCAAGACAGAACTTCTTATGCAAATGCAAGGTGTAGGACACAACGATAATAAAATTCTTGTTTTTGCTACAACACAATACACCCTATGCTTTGGATCAGGCGATACTCCAAATAATTTGACAGAAGGAGGTTTTGAAAGCTTGACACTTAGAACAGAAGGTTTTTCAGGCTCAAATATTTCAGTTTGTGCGAGTGTGAAGGATGTGCTCTCCCAACGTATATTCATGTCTTAA

Protein sequence

MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQYTLCFGSGDTPNNLTEGGFESLTLRTEGFSGSNISVCASVKDVLSQRIFMS
Homology
[Close]
BLAST of CsGy6G012700 vs. NCBI nr
Match: XP_008458578.1 (PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 5.7e-35
Identity = 87/133 (65.41%), Postives = 91/133 (68.42%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATT-- 60
           MACDSAPSI LIDEID LC RGGE NENEAFRRIKTELL+QMQGVGHNDNK+LV ATT  
Sbjct: 310 MACDSAPSIILIDEIDSLCSRGGEGNENEAFRRIKTELLVQMQGVGHNDNKVLVLATTNT 369

Query: 61  --------------------------QYTLCFGSGDTPNNLTEGGFESLTLRTEGFSGSN 106
                                     Q+      GDTPNNLTEG FESLTLRTEGFSGS+
Sbjct: 370 PYALDQAIRRQFDKRIYIPLPDSNARQHIFKVHLGDTPNNLTEGDFESLTLRTEGFSGSD 429

[Close]
BLAST of CsGy6G012700 vs. NCBI nr
Match: XP_008458579.1 (PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 [Cucumis melo])

HSP 1 Score: 156.4 bits (394), Expect = 5.7e-35
Identity = 87/133 (65.41%), Postives = 91/133 (68.42%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATT-- 60
           MACDSAPSI LIDEID LC RGGE NENEAFRRIKTELL+QMQGVGHNDNK+LV ATT  
Sbjct: 209 MACDSAPSIILIDEIDSLCSRGGEGNENEAFRRIKTELLVQMQGVGHNDNKVLVLATTNT 268

Query: 61  --------------------------QYTLCFGSGDTPNNLTEGGFESLTLRTEGFSGSN 106
                                     Q+      GDTPNNLTEG FESLTLRTEGFSGS+
Sbjct: 269 PYALDQAIRRQFDKRIYIPLPDSNARQHIFKVHLGDTPNNLTEGDFESLTLRTEGFSGSD 328

[Close]
BLAST of CsGy6G012700 vs. NCBI nr
Match: XP_023513232.1 (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 134.0 bits (336), Expect = 3.0e-28
Identity = 71/110 (64.55%), Postives = 81/110 (73.64%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           MA DSAPSI  IDEID LCG+ GE NE+EA RRIKTELL+QMQGVGHND K+LV A T  
Sbjct: 217 MARDSAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNT 276

Query: 61  TLCFGS---GDTPNNLTEGGFESLTLRTEGFSGSNISVCASVKDVLSQRI 108
                    GDTP+NLTE  FESL  RT+GFSGS++SVC  VKDVL + +
Sbjct: 277 PYALDQVHLGDTPHNLTEADFESLARRTDGFSGSDVSVC--VKDVLFEPV 324

[Close]
BLAST of CsGy6G012700 vs. NCBI nr
Match: KOM44090.1 (hypothetical protein LR48_Vigan05g169500 [Vigna angularis])

HSP 1 Score: 133.7 bits (335), Expect = 3.9e-28
Identity = 72/110 (65.45%), Postives = 80/110 (72.73%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           MA +SAPSI  IDEID LCG+ GE NE+EA RRIKTELL+QMQGVGHND K+LV A T  
Sbjct: 218 MARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNT 277

Query: 61  TLCFGS---GDTPNNLTEGGFESLTLRTEGFSGSNISVCASVKDVLSQRI 108
                    GDTPNNLTE  FE L  RTEGFSGS+ISVC  VKDVL + +
Sbjct: 278 PYALDQVHLGDTPNNLTESDFEYLASRTEGFSGSDISVC--VKDVLFEPV 325

[Close]
BLAST of CsGy6G012700 vs. NCBI nr
Match: PPS04267.1 (hypothetical protein GOBAR_AA16382 [Gossypium barbadense])

HSP 1 Score: 132.1 bits (331), Expect = 1.1e-27
Identity = 71/110 (64.55%), Postives = 80/110 (72.73%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           MA DSAPSI  IDEID LCG+ GE NE+EA RRIKTELL+QMQGVGH D K+LV A T  
Sbjct: 222 MARDSAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHTDQKVLVLAATNT 281

Query: 61  TLCFGS---GDTPNNLTEGGFESLTLRTEGFSGSNISVCASVKDVLSQRI 108
                    GDTP+NLTE  FE+L  RTEGFSGS+ISVC  VKDVL + +
Sbjct: 282 PYALDQVHLGDTPHNLTESDFENLARRTEGFSGSDISVC--VKDVLFEPV 329

[Close]
BLAST of CsGy6G012700 vs. TAIR10
Match: AT2G27600.1 (AAA-type ATPase family protein)

HSP 1 Score: 119.0 bits (297), Expect = 1.8e-27
Identity = 69/135 (51.11%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATT-- 60
           MA +SAPSI  +DEID LCG  GE NE+EA RRIKTELL+QMQGVGHND K+LV A T  
Sbjct: 219 MARESAPSIIFVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNT 278

Query: 61  --------------------------QYTLCFGSGDTPNNLTEGGFESLTLRTEGFSGSN 108
                                     Q+      GDTP+NLTE  FE L  +TEGFSGS+
Sbjct: 279 PYALDQAIRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSD 338

[Close]
BLAST of CsGy6G012700 vs. TAIR10
Match: AT1G80350.1 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06
Identity = 25/62 (40.32%), Postives = 35/62 (56.45%), Query Frame = 0 

Query: 6   APSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNK-------ILVFATT 61
           APS   IDEID LC   G   E+E+ RR+K+ELL+Q+ GV +           ++V A T
Sbjct: 331 APSTIFIDEIDSLCNSRGGSGEHESSRRVKSELLVQVDGVSNTATNEDGSRKIVMVLAAT 390

[Close]
BLAST of CsGy6G012700 vs. TAIR10
Match: AT2G34560.2 (P-loop containing nucleoside triphosphate hydrolases superfamily protein)

HSP 1 Score: 50.1 bits (118), Expect = 1.0e-06
Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCG-RGGE-CNENEAFRRIKTELLMQMQGVGHNDNKILVFATT 59
           +A   APS   +DEID +   RGGE  +E+EA RR+KTELL+QM G+   +  + V A T
Sbjct: 199 LARHHAPSTIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMDGLQKTNELVFVLAAT 258

[Close]
BLAST of CsGy6G012700 vs. TAIR10
Match: AT1G02890.1 (AAA-type ATPase family protein)

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05
Identity = 21/59 (35.59%), Postives = 34/59 (57.63%), Query Frame = 0 

Query: 1    MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHND-NKILVFATT 59
            +A   APS+  +DE+D + GR     E+EA R++K E ++   G+   D  ++LV A T
Sbjct: 1033 LASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMINWDGLRTKDKERVLVLAAT 1091

[Close]
BLAST of CsGy6G012700 vs. TAIR10
Match: AT4G02480.1 (AAA-type ATPase family protein)

HSP 1 Score: 45.8 bits (107), Expect = 2.0e-05
Identity = 21/59 (35.59%), Postives = 34/59 (57.63%), Query Frame = 0 

Query: 1    MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHND-NKILVFATT 59
            +A   APS+  +DE+D + GR     E+EA R++K E ++   G+   D  ++LV A T
Sbjct: 1052 LASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDRERVLVLAAT 1110

[Close]
BLAST of CsGy6G012700 vs. Swiss-Prot
Match: sp|Q9ZNT0|VPS4_ARATH (Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 OS=Arabidopsis thaliana OX=3702 GN=SKD1 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.3e-26
Identity = 69/135 (51.11%), Postives = 81/135 (60.00%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATT-- 60
           MA +SAPSI  +DEID LCG  GE NE+EA RRIKTELL+QMQGVGHND K+LV A T  
Sbjct: 219 MARESAPSIIFVDEIDSLCGTRGEGNESEASRRIKTELLVQMQGVGHNDEKVLVLAATNT 278

Query: 61  --------------------------QYTLCFGSGDTPNNLTEGGFESLTLRTEGFSGSN 108
                                     Q+      GDTP+NLTE  FE L  +TEGFSGS+
Sbjct: 279 PYALDQAIRRRFDKRIYIPLPEAKARQHMFKVHLGDTPHNLTEPDFEYLGQKTEGFSGSD 338

[Close]
BLAST of CsGy6G012700 vs. Swiss-Prot
Match: sp|Q9UN37|VPS4A_HUMAN (Vacuolar protein sorting-associated protein 4A OS=Homo sapiens OX=9606 GN=VPS4A PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-15
Identity = 52/135 (38.52%), Postives = 68/135 (50.37%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           +A    PSI  IDE+D LCG   E NE+EA RRIKTE L+QMQGVG+N++  LV   T  
Sbjct: 215 LARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNI 274

Query: 61  TLCFGS----------------------------GDTPNNLTEGGFESLTLRTEGFSGSN 108
                S                            G TP+NLT+     L  +TEG+SG++
Sbjct: 275 PWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGAD 334

[Close]
BLAST of CsGy6G012700 vs. Swiss-Prot
Match: sp|Q8VEJ9|VPS4A_MOUSE (Vacuolar protein sorting-associated protein 4A OS=Mus musculus OX=10090 GN=Vps4a PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-15
Identity = 52/135 (38.52%), Postives = 68/135 (50.37%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           +A    PSI  IDE+D LCG   E NE+EA RRIKTE L+QMQGVG+N++  LV   T  
Sbjct: 215 LARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNI 274

Query: 61  TLCFGS----------------------------GDTPNNLTEGGFESLTLRTEGFSGSN 108
                S                            G TP+NLT+     L  +TEG+SG++
Sbjct: 275 PWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGAD 334

[Close]
BLAST of CsGy6G012700 vs. Swiss-Prot
Match: sp|Q793F9|VPS4A_RAT (Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=Vps4a PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-15
Identity = 52/135 (38.52%), Postives = 68/135 (50.37%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           +A    PSI  IDE+D LCG   E NE+EA RRIKTE L+QMQGVG+N++  LV   T  
Sbjct: 215 LARQHKPSIIFIDEVDSLCGSRNE-NESEAARRIKTEFLVQMQGVGNNNDGTLVLGATNI 274

Query: 61  TLCFGS----------------------------GDTPNNLTEGGFESLTLRTEGFSGSN 108
                S                            G TP+NLT+     L  +TEG+SG++
Sbjct: 275 PWVLDSAIRRRFEKRIYIPLPEEAARAQMFRLHLGSTPHNLTDANIHELARKTEGYSGAD 334

[Close]
BLAST of CsGy6G012700 vs. Swiss-Prot
Match: sp|Q0VD48|VPS4B_BOVIN (Vacuolar protein sorting-associated protein 4B OS=Bos taurus OX=9913 GN=VPS4B PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.6e-15
Identity = 54/135 (40.00%), Postives = 70/135 (51.85%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           +A ++ PSI  IDEID LCG   E NE+EA RRIKTE L+QMQGVG +++ ILV   T  
Sbjct: 222 LARENKPSIIFIDEIDSLCGSRSE-NESEAARRIKTEFLVQMQGVGVDNDGILVLGATNI 281

Query: 61  TLCFGS----------------------------GDTPNNLTEGGFESLTLRTEGFSGSN 108
                S                            G T N+LTE  F  L  +TEG+SG++
Sbjct: 282 PWVLDSAIRRRFEKRIYIPLPEAHARAAMFKLHLGTTQNSLTEADFRDLGKKTEGYSGAD 341

[Close]
BLAST of CsGy6G012700 vs. TrEMBL
Match: tr|A0A1S3C864|A0A1S3C864_CUCME (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103497939 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.8e-35
Identity = 87/133 (65.41%), Postives = 91/133 (68.42%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATT-- 60
           MACDSAPSI LIDEID LC RGGE NENEAFRRIKTELL+QMQGVGHNDNK+LV ATT  
Sbjct: 310 MACDSAPSIILIDEIDSLCSRGGEGNENEAFRRIKTELLVQMQGVGHNDNKVLVLATTNT 369

Query: 61  --------------------------QYTLCFGSGDTPNNLTEGGFESLTLRTEGFSGSN 106
                                     Q+      GDTPNNLTEG FESLTLRTEGFSGS+
Sbjct: 370 PYALDQAIRRQFDKRIYIPLPDSNARQHIFKVHLGDTPNNLTEGDFESLTLRTEGFSGSD 429

[Close]
BLAST of CsGy6G012700 vs. TrEMBL
Match: tr|A0A1S3C8R9|A0A1S3C8R9_CUCME (protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103497939 PE=3 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 3.8e-35
Identity = 87/133 (65.41%), Postives = 91/133 (68.42%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATT-- 60
           MACDSAPSI LIDEID LC RGGE NENEAFRRIKTELL+QMQGVGHNDNK+LV ATT  
Sbjct: 209 MACDSAPSIILIDEIDSLCSRGGEGNENEAFRRIKTELLVQMQGVGHNDNKVLVLATTNT 268

Query: 61  --------------------------QYTLCFGSGDTPNNLTEGGFESLTLRTEGFSGSN 106
                                     Q+      GDTPNNLTEG FESLTLRTEGFSGS+
Sbjct: 269 PYALDQAIRRQFDKRIYIPLPDSNARQHIFKVHLGDTPNNLTEGDFESLTLRTEGFSGSD 328

[Close]
BLAST of CsGy6G012700 vs. TrEMBL
Match: tr|A0A0L9UMH3|A0A0L9UMH3_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g169500 PE=3 SV=1)

HSP 1 Score: 133.7 bits (335), Expect = 2.6e-28
Identity = 72/110 (65.45%), Postives = 80/110 (72.73%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           MA +SAPSI  IDEID LCG+ GE NE+EA RRIKTELL+QMQGVGHND K+LV A T  
Sbjct: 218 MARESAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHNDQKVLVLAATNT 277

Query: 61  TLCFGS---GDTPNNLTEGGFESLTLRTEGFSGSNISVCASVKDVLSQRI 108
                    GDTPNNLTE  FE L  RTEGFSGS+ISVC  VKDVL + +
Sbjct: 278 PYALDQVHLGDTPNNLTESDFEYLASRTEGFSGSDISVC--VKDVLFEPV 325

[Close]
BLAST of CsGy6G012700 vs. TrEMBL
Match: tr|A0A2P5XLR1|A0A2P5XLR1_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16382 PE=3 SV=1)

HSP 1 Score: 132.1 bits (331), Expect = 7.6e-28
Identity = 71/110 (64.55%), Postives = 80/110 (72.73%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATTQY 60
           MA DSAPSI  IDEID LCG+ GE NE+EA RRIKTELL+QMQGVGH D K+LV A T  
Sbjct: 222 MARDSAPSIIFIDEIDSLCGQRGEGNESEASRRIKTELLVQMQGVGHTDQKVLVLAATNT 281

Query: 61  TLCFGS---GDTPNNLTEGGFESLTLRTEGFSGSNISVCASVKDVLSQRI 108
                    GDTP+NLTE  FE+L  RTEGFSGS+ISVC  VKDVL + +
Sbjct: 282 PYALDQVHLGDTPHNLTESDFENLARRTEGFSGSDISVC--VKDVLFEPV 329

[Close]
BLAST of CsGy6G012700 vs. TrEMBL
Match: tr|A0A0D9Y320|A0A0D9Y320_9ORYZ (Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=3 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 2.4e-26
Identity = 71/135 (52.59%), Postives = 84/135 (62.22%), Query Frame = 0 

Query: 1   MACDSAPSITLIDEIDYLCGRGGECNENEAFRRIKTELLMQMQGVGHNDNKILVFATT-- 60
           MA ++APSI  IDEID LCG+ GECNENEA RRIKTELL+QMQGVGHND+K+LV A T  
Sbjct: 171 MARENAPSIIFIDEIDSLCGQRGECNENEASRRIKTELLVQMQGVGHNDDKVLVLAATNT 230

Query: 61  --------------------------QYTLCFGSGDTPNNLTEGGFESLTLRTEGFSGSN 108
                                     Q+      GDTP+NL E  FESL  RT+GFSGS+
Sbjct: 231 PYALDQAVRRRFDKRIYIPLPDLKARQHMFKVHLGDTPHNLNESDFESLARRTDGFSGSD 290

The following BLAST results are available for this feature:
BLAST of CsGy6G012700 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008458578.15.7e-3565.41PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 ... [more]
XP_008458579.15.7e-3565.41PREDICTED: protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 ... [more]
XP_023513232.13.0e-2864.55protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 isoform X2 [Cucurbita pepo ... [more]
KOM44090.13.9e-2865.45hypothetical protein LR48_Vigan05g169500 [Vigna angularis][more]
PPS04267.11.1e-2764.55hypothetical protein GOBAR_AA16382 [Gossypium barbadense][more]
BLAST of CsGy6G012700 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G27600.11.8e-2751.11AAA-type ATPase family protein[more]
AT1G80350.11.0e-0640.32P-loop containing nucleoside triphosphate hydrolases superfamily protein[more]
AT2G34560.21.0e-0646.67P-loop containing nucleoside triphosphate hydrolases superfamily protein[more]
AT1G02890.12.0e-0535.59AAA-type ATPase family protein[more]
AT4G02480.12.0e-0535.59AAA-type ATPase family protein[more]
BLAST of CsGy6G012700 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZNT0|VPS4_ARATH3.3e-2651.11Protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1 OS=Arabidopsis thaliana OX=... [more]
sp|Q9UN37|VPS4A_HUMAN2.6e-1538.52Vacuolar protein sorting-associated protein 4A OS=Homo sapiens OX=9606 GN=VPS4A ... [more]
sp|Q8VEJ9|VPS4A_MOUSE2.6e-1538.52Vacuolar protein sorting-associated protein 4A OS=Mus musculus OX=10090 GN=Vps4a... [more]
sp|Q793F9|VPS4A_RAT2.6e-1538.52Vacuolar protein sorting-associated protein 4A OS=Rattus norvegicus OX=10116 GN=... [more]
sp|Q0VD48|VPS4B_BOVIN2.6e-1540.00Vacuolar protein sorting-associated protein 4B OS=Bos taurus OX=9913 GN=VPS4B PE... [more]
BLAST of CsGy6G012700 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C864|A0A1S3C864_CUCME3.8e-3565.41protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X1 OS=Cucumis ... [more]
tr|A0A1S3C8R9|A0A1S3C8R9_CUCME3.8e-3565.41protein SUPPRESSOR OF K(+) TRANSPORT GROWTH DEFECT 1-like isoform X2 OS=Cucumis ... [more]
tr|A0A0L9UMH3|A0A0L9UMH3_PHAAN2.6e-2865.45Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan05g169500 PE... [more]
tr|A0A2P5XLR1|A0A2P5XLR1_GOSBA7.6e-2864.55Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA16382 PE=3 SV... [more]
tr|A0A0D9Y320|A0A0D9Y320_9ORYZ2.4e-2652.59Uncharacterized protein OS=Oryza glumipatula OX=40148 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR003959ATPase_AAA_core
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G012700.1CsGy6G012700.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003959ATPase, AAA-type, corePFAMPF00004AAAcoord: 5..60
e-value: 4.8E-7
score: 30.2
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 1..60
e-value: 2.5E-14
score: 55.1
NoneNo IPR availablePANTHERPTHR23074AAA ATPASEcoord: 1..59
coord: 66..104
NoneNo IPR availablePANTHERPTHR23074:SF137SUBFAMILY NOT NAMEDcoord: 1..59
coord: 66..104
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 6..94