CsGy6G012640 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G012640
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionABSCISIC ACID-INSENSITIVE 5-like protein 1
LocationChr6 : 10941955 .. 10942350 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGAAAAATATATTCAAACTGTTTTAAATCTATCGATCACATTTGGTTTGAGATTGATCATAAAGCCCACATCCCCCACATTCCATTGATGTTCACCAAAATCCTTCCCAAAGTCCACATGCTTTTGGGGAAATCACTTCGGAAGATTTCTTGGTGAAAGCTGGAGTTGTTCAAGAAGCTTCTTCTTCTTCTTCAATGAAACAACACCCACGTTCTGTGAATAACAACAGATCAATGGTGGATTTGAGAGAAATTGGGTTGTCTTTGTCTTATCAACAGAACAATATAATGACGATGCTGCAAGAATCAGAAATAAATGCTCACCCAATTCAATTGAAAAATGTGATTGGGTTGAGCCTAACAACAACAAGAAGACCATCATCCTTCTACTGA

mRNA sequence

ATGTTGAAAAATATATTCAAACTCCCACATCCCCCACATTCCATTGATGTTCACCAAAATCCTTCCCAAAGTCCACATGCTTTTGGGGAAATCACTTCGGAAGATTTCTTGGTGAAAGCTGGAGTTGTTCAAGAAGCTTCTTCTTCTTCTTCAATGAAACAACACCCACGTTCTGTGAATAACAACAGATCAATGGTGGATTTGAGAGAAATTGGGTTGTCTTTGTCTTATCAACAGAACAATATAATGACGATGCTGCAAGAATCAGAAATAAATGCTCACCCAATTCAATTGAAAAATGTGATTGGGTTGAGCCTAACAACAACAAGAAGACCATCATCCTTCTACTGA

Coding sequence (CDS)

ATGTTGAAAAATATATTCAAACTCCCACATCCCCCACATTCCATTGATGTTCACCAAAATCCTTCCCAAAGTCCACATGCTTTTGGGGAAATCACTTCGGAAGATTTCTTGGTGAAAGCTGGAGTTGTTCAAGAAGCTTCTTCTTCTTCTTCAATGAAACAACACCCACGTTCTGTGAATAACAACAGATCAATGGTGGATTTGAGAGAAATTGGGTTGTCTTTGTCTTATCAACAGAACAATATAATGACGATGCTGCAAGAATCAGAAATAAATGCTCACCCAATTCAATTGAAAAATGTGATTGGGTTGAGCCTAACAACAACAAGAAGACCATCATCCTTCTACTGA

Protein sequence

MLKNIFKLPHPPHSIDVHQNPSQSPHAFGEITSEDFLVKAGVVQEASSSSSMKQHPRSVNNNRSMVDLREIGLSLSYQQNNIMTMLQESEINAHPIQLKNVIGLSLTTTRRPSSFY
Homology
[Close]
BLAST of CsGy6G012640 vs. NCBI nr
Match: KGN46956.1 (hypothetical protein Csa_6G152910 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 1.7e-26
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 52  MKQHPRSVNNNRSMVDLREIGLSLSYQQNNIMTMLQESEINAHPIQLKNVIGLSLTTTRR 111
           MKQHPRSVNNNRSMVDLREIGLSLSYQQNNIMTMLQESEINAHPIQLKNVIGLSLTTTRR
Sbjct: 1   MKQHPRSVNNNRSMVDLREIGLSLSYQQNNIMTMLQESEINAHPIQLKNVIGLSLTTTRR 60

Query: 112 PSSFY 117
           PSSFY
Sbjct: 61  PSSFY 65

[Close]
BLAST of CsGy6G012640 vs. NCBI nr
Match: KGN46952.1 (hypothetical protein Csa_6G152380 [Cucumis sativus])

HSP 1 Score: 97.4 bits (241), Expect = 3.3e-17
Identity = 57/75 (76.00%), Postives = 60/75 (80.00%), Query Frame = 0 

Query: 9   PHPPHSIDVHQNPSQSPHAFGEITSEDFLVKAGVVQEASSSS--SMKQHPRSVNNNRSMV 68
           P P  SIDVHQNP QS HA  E+TSE  LVK GVVQEASSSS  SM+Q   SVNNNRSMV
Sbjct: 104 PLPQASIDVHQNPCQSRHASEEMTSEGLLVKDGVVQEASSSSSDSMEQQLCSVNNNRSMV 163

Query: 69  DLREIGLSLSYQQNN 82
           DLREIGLSLSY+QNN
Sbjct: 164 DLREIGLSLSYEQNN 178

[Close]
BLAST of CsGy6G012640 vs. NCBI nr
Match: XP_008458572.2 (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Cucumis melo])

HSP 1 Score: 82.0 bits (201), Expect = 1.4e-12
Identity = 54/80 (67.50%), Postives = 59/80 (73.75%), Query Frame = 0 

Query: 10  HPPHS--IDVHQNPSQSPHAFGEITSEDFLVKAGVVQEASSSS-SMKQHPRSVNNNRSMV 69
           HP H   I+V QNP Q+  A GE+T EDFLVKAGVVQEASSSS SMKQ   SV NNRSMV
Sbjct: 117 HPRHQKFINVQQNPCQNQQALGEMTLEDFLVKAGVVQEASSSSCSMKQQLCSV-NNRSMV 176

Query: 70  DL-----REIGLSLSYQQNN 82
           DL      ++GLSLSYQQNN
Sbjct: 177 DLGFGIGEKLGLSLSYQQNN 195

[Close]
BLAST of CsGy6G012640 vs. NCBI nr
Match: XP_004149281.2 (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Cucumis sativus] >KGN46957.1 hypothetical protein Csa_6G152920 [Cucumis sativus])

HSP 1 Score: 79.7 bits (195), Expect = 7.1e-12
Identity = 52/79 (65.82%), Postives = 57/79 (72.15%), Query Frame = 0 

Query: 9   PHPPHSIDVHQNPSQSPHAFGEITSEDFLVKAGVVQEASSSS-SMKQHPRSVNNNRSMVD 68
           PH    I+V QNP QS  A GE+T EDFLVKAGV QEASS+S SMKQ   SV NNRSMVD
Sbjct: 118 PHHHKFINVQQNPCQSQQALGEMTLEDFLVKAGVFQEASSASCSMKQQLCSV-NNRSMVD 177

Query: 69  L-----REIGLSLSYQQNN 82
           L      ++GLSLSYQQNN
Sbjct: 178 LGFGIGEKLGLSLSYQQNN 195

[Close]
BLAST of CsGy6G012640 vs. NCBI nr
Match: KGN46953.1 (hypothetical protein Csa_6G152390 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 8.7e-10
Identity = 39/47 (82.98%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 9   PHPPHSIDVHQNPSQSPHAFGEITSEDFLVKAGVVQEA-SSSSSMKQ 55
           PHP HSIDVHQNP QS HA GE+TSED LVK GVVQEA SSSSSMKQ
Sbjct: 101 PHPQHSIDVHQNPCQSRHASGEMTSEDLLVKDGVVQEASSSSSSMKQ 147

[Close]
BLAST of CsGy6G012640 vs. TrEMBL
Match: tr|A0A0A0KGS1|A0A0A0KGS1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152910 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.2e-26
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 52  MKQHPRSVNNNRSMVDLREIGLSLSYQQNNIMTMLQESEINAHPIQLKNVIGLSLTTTRR 111
           MKQHPRSVNNNRSMVDLREIGLSLSYQQNNIMTMLQESEINAHPIQLKNVIGLSLTTTRR
Sbjct: 1   MKQHPRSVNNNRSMVDLREIGLSLSYQQNNIMTMLQESEINAHPIQLKNVIGLSLTTTRR 60

Query: 112 PSSFY 117
           PSSFY
Sbjct: 61  PSSFY 65

[Close]
BLAST of CsGy6G012640 vs. TrEMBL
Match: tr|A0A0A0KEX6|A0A0A0KEX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152380 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 2.2e-17
Identity = 57/75 (76.00%), Postives = 60/75 (80.00%), Query Frame = 0 

Query: 9   PHPPHSIDVHQNPSQSPHAFGEITSEDFLVKAGVVQEASSSS--SMKQHPRSVNNNRSMV 68
           P P  SIDVHQNP QS HA  E+TSE  LVK GVVQEASSSS  SM+Q   SVNNNRSMV
Sbjct: 104 PLPQASIDVHQNPCQSRHASEEMTSEGLLVKDGVVQEASSSSSDSMEQQLCSVNNNRSMV 163

Query: 69  DLREIGLSLSYQQNN 82
           DLREIGLSLSY+QNN
Sbjct: 164 DLREIGLSLSYEQNN 178

[Close]
BLAST of CsGy6G012640 vs. TrEMBL
Match: tr|A0A1S3C9E3|A0A1S3C9E3_CUCME (ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103497935 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.5e-13
Identity = 54/80 (67.50%), Postives = 59/80 (73.75%), Query Frame = 0 

Query: 10  HPPHS--IDVHQNPSQSPHAFGEITSEDFLVKAGVVQEASSSS-SMKQHPRSVNNNRSMV 69
           HP H   I+V QNP Q+  A GE+T EDFLVKAGVVQEASSSS SMKQ   SV NNRSMV
Sbjct: 117 HPRHQKFINVQQNPCQNQQALGEMTLEDFLVKAGVVQEASSSSCSMKQQLCSV-NNRSMV 176

Query: 70  DL-----REIGLSLSYQQNN 82
           DL      ++GLSLSYQQNN
Sbjct: 177 DLGFGIGEKLGLSLSYQQNN 195

[Close]
BLAST of CsGy6G012640 vs. TrEMBL
Match: tr|A0A0A0KEY1|A0A0A0KEY1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152920 PE=4 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 4.7e-12
Identity = 52/79 (65.82%), Postives = 57/79 (72.15%), Query Frame = 0 

Query: 9   PHPPHSIDVHQNPSQSPHAFGEITSEDFLVKAGVVQEASSSS-SMKQHPRSVNNNRSMVD 68
           PH    I+V QNP QS  A GE+T EDFLVKAGV QEASS+S SMKQ   SV NNRSMVD
Sbjct: 118 PHHHKFINVQQNPCQSQQALGEMTLEDFLVKAGVFQEASSASCSMKQQLCSV-NNRSMVD 177

Query: 69  L-----REIGLSLSYQQNN 82
           L      ++GLSLSYQQNN
Sbjct: 178 LGFGIGEKLGLSLSYQQNN 195

[Close]
BLAST of CsGy6G012640 vs. TrEMBL
Match: tr|A0A0A0KBT4|A0A0A0KBT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152390 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.8e-10
Identity = 39/47 (82.98%), Postives = 40/47 (85.11%), Query Frame = 0 

Query: 9   PHPPHSIDVHQNPSQSPHAFGEITSEDFLVKAGVVQEA-SSSSSMKQ 55
           PHP HSIDVHQNP QS HA GE+TSED LVK GVVQEA SSSSSMKQ
Sbjct: 101 PHPQHSIDVHQNPCQSRHASGEMTSEDLLVKDGVVQEASSSSSSMKQ 147

The following BLAST results are available for this feature:
BLAST of CsGy6G012640 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46956.11.7e-26100.00hypothetical protein Csa_6G152910 [Cucumis sativus][more]
KGN46952.13.3e-1776.00hypothetical protein Csa_6G152380 [Cucumis sativus][more]
XP_008458572.21.4e-1267.50PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Cucumis melo][more]
XP_004149281.27.1e-1265.82PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Cucumis sativus] >KGN4695... [more]
KGN46953.18.7e-1082.98hypothetical protein Csa_6G152390 [Cucumis sativus][more]
BLAST of CsGy6G012640 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G012640 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of CsGy6G012640 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KGS1|A0A0A0KGS1_CUCSA1.2e-26100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152910 PE=4 SV=1[more]
tr|A0A0A0KEX6|A0A0A0KEX6_CUCSA2.2e-1776.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152380 PE=4 SV=1[more]
tr|A0A1S3C9E3|A0A1S3C9E3_CUCME9.5e-1367.50ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Cucumis melo OX=3656 GN=LOC1034979... [more]
tr|A0A0A0KEY1|A0A0A0KEY1_CUCSA4.7e-1265.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152920 PE=4 SV=1[more]
tr|A0A0A0KBT4|A0A0A0KBT4_CUCSA5.8e-1082.98Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152390 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003700 transcription factor activity, sequence-specific DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G012640.1CsGy6G012640.1mRNA


Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G012640Cucumber (Gy14) v2cgybcgybB102
CsGy6G012640Cucurbita maxima (Rimu)cgybcmaB730
CsGy6G012640Cucurbita maxima (Rimu)cgybcmaB802
CsGy6G012640Cucurbita maxima (Rimu)cgybcmaB820
CsGy6G012640Cucurbita maxima (Rimu)cgybcmaB862
CsGy6G012640Cucurbita moschata (Rifu)cgybcmoB715
CsGy6G012640Cucurbita moschata (Rifu)cgybcmoB780
CsGy6G012640Cucurbita moschata (Rifu)cgybcmoB799
CsGy6G012640Cucurbita moschata (Rifu)cgybcmoB844
CsGy6G012640Cucurbita pepo (Zucchini)cgybcpeB758
CsGy6G012640Cucurbita pepo (Zucchini)cgybcpeB811
CsGy6G012640Cucurbita pepo (Zucchini)cgybcpeB827
CsGy6G012640Cucurbita pepo (Zucchini)cgybcpeB856
CsGy6G012640Cucumber (Chinese Long) v2cgybcuB282
CsGy6G012640Bottle gourd (USVL1VR-Ls)cgyblsiB377
CsGy6G012640Bottle gourd (USVL1VR-Ls)cgyblsiB399
CsGy6G012640Melon (DHL92) v3.5.1cgybmeB365
CsGy6G012640Melon (DHL92) v3.5.1cgybmeB425
CsGy6G012640Melon (DHL92) v3.6.1cgybmedB366
CsGy6G012640Watermelon (Charleston Gray)cgybwcgB393
CsGy6G012640Watermelon (Charleston Gray)cgybwcgB401
CsGy6G012640Watermelon (Charleston Gray)cgybwcgB427
CsGy6G012640Watermelon (97103) v1cgybwmB424
CsGy6G012640Watermelon (97103) v1cgybwmB473
CsGy6G012640Watermelon (97103) v1cgybwmB478
CsGy6G012640Wild cucumber (PI 183967)cgybcpiB288
CsGy6G012640Wild cucumber (PI 183967)cgybcpiB290
CsGy6G012640Silver-seed gourdcarcgybB0265
CsGy6G012640Silver-seed gourdcarcgybB0422
CsGy6G012640Silver-seed gourdcarcgybB0915
CsGy6G012640Cucumber (Chinese Long) v3cgybcucB298
CsGy6G012640Cucumber (Chinese Long) v3cgybcucB299
CsGy6G012640Watermelon (97103) v2cgybwmbB399
CsGy6G012640Watermelon (97103) v2cgybwmbB406
CsGy6G012640Wax gourdcgybwgoB579