CsGy6G012630 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G012630
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2
Location	Chr6 : 10937914 .. 10938292 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACCTTGAAGAAGATATTCAAACCCAATTCAGAGCTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCATAAAGATCAACAAAACCCACATCCCCAAGATGTTCACCAAGACCCTTGCCAAAGTCGACATGCTTTCGGAGAAATGACTTGGGAAGATTCATTGGTGAAGTTAGCTGGGAGTTGTTCAAGAAGCTTCTTCTTGTTGTCGTTGAATGAAACAAACAGCCTTTGTTCTGCGAATAACAACATATCAATGGTGGATTGATGGTCCTACTGAAGTTGTGTTGCAGCGGAGACAGCGCAGGATGATAGAAAATCGTGAGTGTCCTCTGCTGCTCTATATATCTCGGCCACGAAAACATGGCTAA

mRNA sequence

ATGAACCTTGAAGAAGATATTCAAACCCAATTCAGAGCTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCATAAAGATCAACAAAACCCACATCCCCAAGATGTTCACCAAGACCCTTGCCAAAGTCGACATGCTTTCGGAGAAATGACTTGGGAAGATTCATTGGTGAAGTTAGCTGGGAGTTGTTCAAGAAGCTTCTTCTTGTTGTCGTTGAATGAAACAAACAGCCTTTGTTCTGCGAATAACAACATATCAATGCGGAGACAGCGCAGGATGATAGAAAATCGTGAGTGTCCTCTGCTGCTCTATATATCTCGGCCACGAAAACATGGCTAA

Coding sequence (CDS)

ATGAACCTTGAAGAAGATATTCAAACCCAATTCAGAGCTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCATAAAGATCAACAAAACCCACATCCCCAAGATGTTCACCAAGACCCTTGCCAAAGTCGACATGCTTTCGGAGAAATGACTTGGGAAGATTCATTGGTGAAGTTAGCTGGGAGTTGTTCAAGAAGCTTCTTCTTGTTGTCGTTGAATGAAACAAACAGCCTTTGTTCTGCGAATAACAACATATCAATGCGGAGACAGCGCAGGATGATAGAAAATCGTGAGTGTCCTCTGCTGCTCTATATATCTCGGCCACGAAAACATGGCTAA

Protein sequence

MNLEEDIQTQFRACFKSIDDIWSEIDHKDQQNPHPQDVHQDPCQSRHAFGEMTWEDSLVKLAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMIENRECPLLLYISRPRKHG

Homology

[Close]

BLAST of CsGy6G012630 vs. NCBI nr
Match: KGN46955.1 (hypothetical protein Csa_6G152900 [Cucumis sativus])

HSP 1 Score: 232.6 bits (592), Expect = 6.5e-58
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   MNLEEDIQTQFRACFKSIDDIWSEIDHKDQQNPHPQDVHQDPCQSRHAFGEMTWEDSLVK 60
           MNLEEDIQTQFRACFKS DDIWSEIDHKDQQNPHPQDVHQDPCQSRHAFGEMTWEDSLVK
Sbjct: 1   MNLEEDIQTQFRACFKSTDDIWSEIDHKDQQNPHPQDVHQDPCQSRHAFGEMTWEDSLVK 60

Query: 61  LAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMIENRECPLLLYISRPRKHG 115
           LAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMIENRECPLLLYISRPRK G
Sbjct: 61  LAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMIENRECPLLLYISRPRKPG 114

[Close]

BLAST of CsGy6G012630 vs. NCBI nr
Match: KGN46954.1 (hypothetical protein Csa_6G152890 [Cucumis sativus])

HSP 1 Score: 99.8 bits (247), Expect = 6.5e-18
Identity = 60/101 (59.41%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 1  MNLEEDIQTQFRACFKSIDDIWSEIDHK-DQQNPHPQ----DVHQDPCQSRHAFGEMTWE 60
          MN+E+DIQTQFRACFKSIDDIWSEIDHK DQQNPHPQ    DVHQD CQS HAFGEM  E
Sbjct: 1  MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 60

Query: 61 DSLVKLAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMI 97
           S       CS             LCS N N SM   R ++
Sbjct: 61 AS-XXXXXXCS---------VKQQLCSGNANRSMVDLREIV 91

[Close]

BLAST of CsGy6G012630 vs. NCBI nr
Match: KGN46953.1 (hypothetical protein Csa_6G152390 [Cucumis sativus])

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDQQNPHPQ---DVHQDPCQSRHAFGEMTWEDSLVK 61
           F  CFKSIDDIWSEIDHKDQQNPHPQ   DVHQ+PCQSRHA GEMT ED LVK
Sbjct: 79  FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVK 131

[Close]

BLAST of CsGy6G012630 vs. NCBI nr
Match: XP_016902297.1 (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 91.7 bits (226), Expect = 1.8e-15
Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDQQNPHPQ---DVHQDPCQSRHAFGEMTWEDSLVK 61
           F  CFKSIDDIWSEIDHKDQQNPHPQ   DV Q+PCQSRHAFGEMT ED LVK
Sbjct: 71  FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVQQNPCQSRHAFGEMTSEDFLVK 123

[Close]

BLAST of CsGy6G012630 vs. NCBI nr
Match: XP_016902296.1 (PREDICTED: putative protein TPRXL isoform X1 [Cucumis melo])

HSP 1 Score: 88.6 bits (218), Expect = 1.5e-14
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDQQNPHPQ---DVHQDPCQSRHAFGEMTWEDSLVK 61
           F  CFKSIDDIWSEIDHKDQQNPHPQ   DV Q+PCQSRHAF EMT ED LVK
Sbjct: 71  FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVQQNPCQSRHAFREMTSEDFLVK 123

[Close]

BLAST of CsGy6G012630 vs. TrEMBL
Match: tr|A0A0A0KB58|A0A0A0KB58_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152900 PE=4 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.3e-58
Identity = 112/114 (98.25%), Postives = 112/114 (98.25%), Query Frame = 0


Query: 1   MNLEEDIQTQFRACFKSIDDIWSEIDHKDQQNPHPQDVHQDPCQSRHAFGEMTWEDSLVK 60
           MNLEEDIQTQFRACFKS DDIWSEIDHKDQQNPHPQDVHQDPCQSRHAFGEMTWEDSLVK
Sbjct: 1   MNLEEDIQTQFRACFKSTDDIWSEIDHKDQQNPHPQDVHQDPCQSRHAFGEMTWEDSLVK 60

Query: 61  LAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMIENRECPLLLYISRPRKHG 115
           LAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMIENRECPLLLYISRPRK G
Sbjct: 61  LAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMIENRECPLLLYISRPRKPG 114

[Close]

BLAST of CsGy6G012630 vs. TrEMBL
Match: tr|A0A0A0KDP3|A0A0A0KDP3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152890 PE=4 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 4.3e-18
Identity = 60/101 (59.41%), Postives = 64/101 (63.37%), Query Frame = 0


Query: 1  MNLEEDIQTQFRACFKSIDDIWSEIDHK-DQQNPHPQ----DVHQDPCQSRHAFGEMTWE 60
          MN+E+DIQTQFRACFKSIDDIWSEIDHK DQQNPHPQ    DVHQD CQS HAFGEM  E
Sbjct: 1  MNVEQDIQTQFRACFKSIDDIWSEIDHKDDQQNPHPQDYSIDVHQDSCQSPHAFGEMNSE 60

Query: 61 DSLVKLAGSCSRSFFLLSLNETNSLCSANNNISMRRQRRMI 97
           S       CS             LCS N N SM   R ++
Sbjct: 61 AS-XXXXXXCS---------VKQQLCSGNANRSMVDLREIV 91

[Close]

BLAST of CsGy6G012630 vs. TrEMBL
Match: tr|A0A1S4E244|A0A1S4E244_CUCME (ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC107991613 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDQQNPHPQ---DVHQDPCQSRHAFGEMTWEDSLVK 61
           F  CFKSIDDIWSEIDHKDQQNPHPQ   DV Q+PCQSRHAFGEMT ED LVK
Sbjct: 71  FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVQQNPCQSRHAFGEMTSEDFLVK 123

[Close]

BLAST of CsGy6G012630 vs. TrEMBL
Match: tr|A0A0A0KBT4|A0A0A0KBT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152390 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-15
Identity = 44/53 (83.02%), Postives = 45/53 (84.91%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDQQNPHPQ---DVHQDPCQSRHAFGEMTWEDSLVK 61
           F  CFKSIDDIWSEIDHKDQQNPHPQ   DVHQ+PCQSRHA GEMT ED LVK
Sbjct: 79  FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVK 131

[Close]

BLAST of CsGy6G012630 vs. TrEMBL
Match: tr|A0A1S4E242|A0A1S4E242_CUCME (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC107991613 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 1.0e-14
Identity = 43/53 (81.13%), Postives = 44/53 (83.02%), Query Frame = 0


Query: 11  FRACFKSIDDIWSEIDHKDQQNPHPQ---DVHQDPCQSRHAFGEMTWEDSLVK 61
           F  CFKSIDDIWSEIDHKDQQNPHPQ   DV Q+PCQSRHAF EMT ED LVK
Sbjct: 71  FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVQQNPCQSRHAFREMTSEDFLVK 123

The following BLAST results are available for this feature:

BLAST of CsGy6G012630 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46955.1	6.5e-58	98.25	hypothetical protein Csa_6G152900 [Cucumis sativus]	[more]
KGN46954.1	6.5e-18	59.41	hypothetical protein Csa_6G152890 [Cucumis sativus]	[more]
KGN46953.1	1.8e-15	83.02	hypothetical protein Csa_6G152390 [Cucumis sativus]	[more]
XP_016902297.1	1.8e-15	83.02	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 [Cucumis melo]	[more]
XP_016902296.1	1.5e-14	81.13	PREDICTED: putative protein TPRXL isoform X1 [Cucumis melo]	[more]

BLAST of CsGy6G012630 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of CsGy6G012630 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of CsGy6G012630 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KB58\|A0A0A0KB58_CUCSA	4.3e-58	98.25	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152900 PE=4 SV=1	[more]
tr\|A0A0A0KDP3\|A0A0A0KDP3_CUCSA	4.3e-18	59.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152890 PE=4 SV=1	[more]
tr\|A0A1S4E244\|A0A1S4E244_CUCME	1.2e-15	83.02	ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A0A0KBT4\|A0A0A0KBT4_CUCSA	1.2e-15	83.02	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152390 PE=4 SV=1	[more]
tr\|A0A1S4E242\|A0A1S4E242_CUCME	1.0e-14	81.13	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC107991613 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012630.1	CsGy6G012630.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR22952	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	coord: 14..62
None	No IPR available	PANTHER	PTHR22952:SF119	ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 1	coord: 14..62

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G012630	Csa6G152390	Cucumber (Chinese Long) v2	cgybcuB282

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G012630	Cucumber (Gy14) v2	cgybcgybB102
CsGy6G012630	Cucurbita maxima (Rimu)	cgybcmaB730
CsGy6G012630	Cucurbita maxima (Rimu)	cgybcmaB802
CsGy6G012630	Cucurbita maxima (Rimu)	cgybcmaB820
CsGy6G012630	Cucurbita maxima (Rimu)	cgybcmaB862
CsGy6G012630	Cucurbita moschata (Rifu)	cgybcmoB715
CsGy6G012630	Cucurbita moschata (Rifu)	cgybcmoB780
CsGy6G012630	Cucurbita moschata (Rifu)	cgybcmoB799
CsGy6G012630	Cucurbita moschata (Rifu)	cgybcmoB844
CsGy6G012630	Cucurbita pepo (Zucchini)	cgybcpeB758
CsGy6G012630	Cucurbita pepo (Zucchini)	cgybcpeB811
CsGy6G012630	Cucurbita pepo (Zucchini)	cgybcpeB827
CsGy6G012630	Cucurbita pepo (Zucchini)	cgybcpeB856
CsGy6G012630	Bottle gourd (USVL1VR-Ls)	cgyblsiB377
CsGy6G012630	Bottle gourd (USVL1VR-Ls)	cgyblsiB399
CsGy6G012630	Melon (DHL92) v3.5.1	cgybmeB365
CsGy6G012630	Melon (DHL92) v3.5.1	cgybmeB425
CsGy6G012630	Melon (DHL92) v3.6.1	cgybmedB366
CsGy6G012630	Watermelon (Charleston Gray)	cgybwcgB393
CsGy6G012630	Watermelon (Charleston Gray)	cgybwcgB401
CsGy6G012630	Watermelon (Charleston Gray)	cgybwcgB427
CsGy6G012630	Watermelon (97103) v1	cgybwmB424
CsGy6G012630	Watermelon (97103) v1	cgybwmB473
CsGy6G012630	Watermelon (97103) v1	cgybwmB478
CsGy6G012630	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G012630	Wild cucumber (PI 183967)	cgybcpiB290
CsGy6G012630	Silver-seed gourd	carcgybB0265
CsGy6G012630	Silver-seed gourd	carcgybB0422
CsGy6G012630	Silver-seed gourd	carcgybB0915
CsGy6G012630	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G012630	Cucumber (Chinese Long) v3	cgybcucB299
CsGy6G012630	Watermelon (97103) v2	cgybwmbB399
CsGy6G012630	Watermelon (97103) v2	cgybwmbB406
CsGy6G012630	Wax gourd	cgybwgoB579