CsGy6G012590 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G012590
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2
Location	Chr6 : 10927081 .. 10928047 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTGGAATTCAAGAAAGTTTGGGAGACACCAAGTTTGCTACTCCACCAACTTTACATCATTCCACTATGGGAGTGTTCAAACCAATCCAACACAAGTGAGTGGATGATTTGGTGGGACTTAAAATATCAATCTTAAAAGTGGCCTCACCCCCACATGTTATATTATAATTAGTGCAACTCCATTCTCTCTCTTCTGCTTTTGCTTCATCTTCTCCTCCTCCTTCTTCACCATTTTCTTTCCACATTAATCGATCCTTATCTTCTTCTTTTTATTTTTGTTTCTTTCTTCAAATGCTCGCTTTCATTCAGGGTTTTTGAATTGGGCTTCTGTGTTTCACTCTCTTTCTCTTCATTATTCTACTTTTTTATTTTTACACACACCCACTTCCTTTTCTTTTCTGCCTATTATTTCCACTCACTTAATCCATCATTTCATTCCCATTTTCTGTTTCCCCCCTAAACCATAATTTGCCAAACCATGACTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTCTCTCTCATTTTATTGCTTTTTTGGTGCTGCTCAATCATATTTTTTCTACGCCATTTTCCTACAAATTTAATTCCAAACAGAAAAATCCTTCCTGCTGTAAGTACTGTTGAAGAAGATATTCAAACCCAATTTCTCTCGCCCTCACAACAAATTGAACCTCAAAATCATCACCCTTTTCTGCTTCCTCATAATTCTACACCAAATCTTTGTAGCCAAGGCTCTTCATCAATTCCATTCCCACTTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCACAAAGATCAACAAAACCCACATCCCCAACATTCCATTGATGTTCACCAAAATCCTTGCCAAAGTCGACATGCTTCTGGGGAAATGACTTCGGAAGATTTATTGGTGAAAGATGGAGTTGTTCAAGAAGCTTCTTCTTCTTCTTCTTCTTCAATGAAACAATAG

mRNA sequence

ATGGGTGGAATTCAAGAAAGTTTGGGAGACACCAAGTTTGCTACTCCACCAACTTTACATCATTCCACTATGGGAGTGTTCAAACCAATCCAACACAAAAAAATCCTTCCTGCTGTAAGTACTGTTGAAGAAGATATTCAAACCCAATTTCTCTCGCCCTCACAACAAATTGAACCTCAAAATCATCACCCTTTTCTGCTTCCTCATAATTCTACACCAAATCTTTGTAGCCAAGGCTCTTCATCAATTCCATTCCCACTTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCACAAAGATCAACAAAACCCACATCCCCAACATTCCATTGATGTTCACCAAAATCCTTGCCAAAGTCGACATGCTTCTGGGGAAATGACTTCGGAAGATTTATTGGTGAAAGATGGAGTTGTTCAAGAAGCTTCTTCTTCTTCTTCTTCTTCAATGAAACAATAG

Coding sequence (CDS)

ATGGGTGGAATTCAAGAAAGTTTGGGAGACACCAAGTTTGCTACTCCACCAACTTTACATCATTCCACTATGGGAGTGTTCAAACCAATCCAACACAAAAAAATCCTTCCTGCTGTAAGTACTGTTGAAGAAGATATTCAAACCCAATTTCTCTCGCCCTCACAACAAATTGAACCTCAAAATCATCACCCTTTTCTGCTTCCTCATAATTCTACACCAAATCTTTGTAGCCAAGGCTCTTCATCAATTCCATTCCCACTTTGTTTCAAATCTATCGATGACATTTGGTCTGAGATTGATCACAAAGATCAACAAAACCCACATCCCCAACATTCCATTGATGTTCACCAAAATCCTTGCCAAAGTCGACATGCTTCTGGGGAAATGACTTCGGAAGATTTATTGGTGAAAGATGGAGTTGTTCAAGAAGCTTCTTCTTCTTCTTCTTCTTCAATGAAACAATAG

Protein sequence

MGGIQESLGDTKFATPPTLHHSTMGVFKPIQHKKILPAVSTVEEDIQTQFLSPSQQIEPQNHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVKDGVVQEASSSSSSSMKQ

Homology

[Close]

BLAST of CsGy6G012590 vs. NCBI nr
Match: KGN46953.1 (hypothetical protein Csa_6G152390 [Cucumis sativus])

HSP 1 Score: 288.1 bits (736), Expect = 1.8e-74
Identity = 146/154 (94.81%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MGGIQESLGDTKFATPPTLHHSTMGVFKPIQHKKILPAVSTVEEDIQTQFLSPSQQIEPQ 60
           MGGIQESLGDTKFATPPTLHHSTMG      HKKILPAVSTVEEDIQTQF SPSQQIEPQ
Sbjct: 1   MGGIQESLGDTKFATPPTLHHSTMG------HKKILPAVSTVEEDIQTQFRSPSQQIEPQ 60

Query: 61  NHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPC 120
           NHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPC
Sbjct: 61  NHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPC 120

Query: 121 QSRHASGEMTSEDLLVKDGVVQEASSSSSSSMKQ 155
           QSRHASGEMTSEDLLVKDGVVQEA SSSSSSMKQ
Sbjct: 121 QSRHASGEMTSEDLLVKDGVVQEA-SSSSSSMKQ 147

[Close]

BLAST of CsGy6G012590 vs. NCBI nr
Match: KGN46952.1 (hypothetical protein Csa_6G152380 [Cucumis sativus])

HSP 1 Score: 201.8 bits (512), Expect = 1.6e-48
Identity = 101/125 (80.80%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 30  IQHKKILPAVSTVEEDIQTQFLSPSQQIEPQNHHPFLLPHNSTPNLCSQGSSSIPFPLCF 89
           I+++KILP +  VEED+QTQF S SQQ EPQNHHPF+LP+ STPNLCSQGS SIPFPLCF
Sbjct: 27  IRNRKILPTICNVEEDVQTQFHSQSQQNEPQNHHPFMLPNISTPNLCSQGSLSIPFPLCF 86

Query: 90  KSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVKDGVVQEASSSSS 149
           KSIDD+WSEI H DQQNP PQ SIDVHQNPCQSRHAS EMTSE LLVKDGVVQEASSSSS
Sbjct: 87  KSIDDVWSEIGHNDQQNPLPQASIDVHQNPCQSRHASEEMTSEGLLVKDGVVQEASSSSS 146

Query: 150 SSMKQ 155
            SM+Q
Sbjct: 147 DSMEQ 151

[Close]

BLAST of CsGy6G012590 vs. NCBI nr
Match: XP_016902297.1 (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 8.2e-32
Identity = 83/124 (66.94%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 19  LHHSTMGVFKPIQHKKILPAVSTVEEDIQTQFLSPSQQIEPQNHH-PFLLPHNSTPNLCS 78
           LHH     F+   ++KIL           TQF S SQQ EP +HH PF++P NS   LCS
Sbjct: 19  LHHLPRNSFR---NRKIL----------HTQFHSLSQQNEPHSHHNPFMVPDNS---LCS 78

Query: 79  QGSSSIP-FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLV 138
            GS SIP FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDV QNPCQSRHA GEMTSED LV
Sbjct: 79  PGSLSIPIFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVQQNPCQSRHAFGEMTSEDFLV 126

Query: 139 KDGV 141
           K GV
Sbjct: 139 KAGV 126

[Close]

BLAST of CsGy6G012590 vs. NCBI nr
Match: XP_016902296.1 (PREDICTED: putative protein TPRXL isoform X1 [Cucumis melo])

HSP 1 Score: 144.1 bits (362), Expect = 4.1e-31
Identity = 83/126 (65.87%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 19  LHHSTMGVFKPIQHKKILPAVSTVEEDIQTQFLSPSQQIEPQNHH-PFLLPHNSTPNLCS 78
           LHH     F+   ++KIL           TQF S SQQ EP +HH PF++P NS   LCS
Sbjct: 19  LHHLPRNSFR---NRKIL----------HTQFHSLSQQNEPHSHHNPFMVPDNS---LCS 78

Query: 79  QGSSSIP-FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLV 138
            GS SIP FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDV QNPCQSRHA  EMTSED LV
Sbjct: 79  PGSLSIPIFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVQQNPCQSRHAFREMTSEDFLV 128

Query: 139 KDGVVQ 143
           K G VQ
Sbjct: 139 KAGDVQ 128

[Close]

BLAST of CsGy6G012590 vs. NCBI nr
Match: XP_008458572.2 (PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Cucumis melo])

HSP 1 Score: 142.9 bits (359), Expect = 9.1e-31
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 44  EDIQTQFLSPSQQIEPQNHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKD 103
           EDIQTQF S SQ+ EPQNHHPF++ +NS  NLC+QGS SIP PLC K++D+IWSEI HKD
Sbjct: 56  EDIQTQFHSQSQENEPQNHHPFMVTNNSRSNLCNQGSFSIPIPLCGKTVDEIWSEI-HKD 115

Query: 104 QQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVKDGVVQEASSSSSSSMKQ 155
           QQ+P  Q  I+V QNPCQ++ A GEMT ED LVK GVVQEASSSS S  +Q
Sbjct: 116 QQHPRHQKFINVQQNPCQNQQALGEMTLEDFLVKAGVVQEASSSSCSMKQQ 165

[Close]

BLAST of CsGy6G012590 vs. TAIR10
Match: AT3G44460.1 (Basic-leucine zipper (bZIP) transcription factor family protein)

HSP 1 Score: 57.4 bits (137), Expect = 9.1e-09
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 78  QGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVK 137
           QGS S+P PLC K++D++W EI +  QQ+P   +S        + +   GE+T ED LVK
Sbjct: 96  QGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFLVK 155

Query: 138 DGVVQE 144
            GVVQE
Sbjct: 156 AGVVQE 161

[Close]

BLAST of CsGy6G012590 vs. Swiss-Prot
Match: sp|Q8RYD6|AI5L1_ARATH (ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=DPBF2 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 1.6e-07
Identity = 30/66 (45.45%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 78  QGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVK 137
           QGS S+P PLC K++D++W EI +  QQ+P   +S        + +   GE+T ED LVK
Sbjct: 96  QGSLSLPVPLCKKTVDEVWLEIQNGVQQHPPSSNSGQNSAENIRRQQTLGEITLEDFLVK 155

Query: 138 DGVVQE 144
            GVVQE
Sbjct: 156 AGVVQE 161

[Close]

BLAST of CsGy6G012590 vs. Swiss-Prot
Match: sp|Q8RZ35|ABI5_ORYSJ (bZIP transcription factor ABI5 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=ABI5 PE=1 SV=1)

HSP 1 Score: 53.9 bits (128), Expect = 1.8e-06
Identity = 29/73 (39.73%), Postives = 41/73 (56.16%), Query Frame = 0


Query: 75  LCSQGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQN----PCQSRHAS-GEM 134
           LC QGS S+P PLC K+++++W+EI+        P  ++  H          R  + GEM
Sbjct: 113 LCRQGSFSLPLPLCQKTVEEVWTEINQAPAHTSAPASALQPHAGSGGVAANDRQVTLGEM 172

Query: 135 TSEDLLVKDGVVQ 143
           T ED LVK GVV+
Sbjct: 173 TLEDFLVKAGVVR 185

[Close]

BLAST of CsGy6G012590 vs. TrEMBL
Match: tr|A0A0A0KBT4|A0A0A0KBT4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152390 PE=4 SV=1)

HSP 1 Score: 288.1 bits (736), Expect = 1.2e-74
Identity = 146/154 (94.81%), Postives = 146/154 (94.81%), Query Frame = 0


Query: 1   MGGIQESLGDTKFATPPTLHHSTMGVFKPIQHKKILPAVSTVEEDIQTQFLSPSQQIEPQ 60
           MGGIQESLGDTKFATPPTLHHSTMG      HKKILPAVSTVEEDIQTQF SPSQQIEPQ
Sbjct: 1   MGGIQESLGDTKFATPPTLHHSTMG------HKKILPAVSTVEEDIQTQFRSPSQQIEPQ 60

Query: 61  NHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPC 120
           NHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPC
Sbjct: 61  NHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPC 120

Query: 121 QSRHASGEMTSEDLLVKDGVVQEASSSSSSSMKQ 155
           QSRHASGEMTSEDLLVKDGVVQEA SSSSSSMKQ
Sbjct: 121 QSRHASGEMTSEDLLVKDGVVQEA-SSSSSSMKQ 147

[Close]

BLAST of CsGy6G012590 vs. TrEMBL
Match: tr|A0A0A0KEX6|A0A0A0KEX6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152380 PE=4 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 1.1e-48
Identity = 101/125 (80.80%), Postives = 110/125 (88.00%), Query Frame = 0


Query: 30  IQHKKILPAVSTVEEDIQTQFLSPSQQIEPQNHHPFLLPHNSTPNLCSQGSSSIPFPLCF 89
           I+++KILP +  VEED+QTQF S SQQ EPQNHHPF+LP+ STPNLCSQGS SIPFPLCF
Sbjct: 27  IRNRKILPTICNVEEDVQTQFHSQSQQNEPQNHHPFMLPNISTPNLCSQGSLSIPFPLCF 86

Query: 90  KSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVKDGVVQEASSSSS 149
           KSIDD+WSEI H DQQNP PQ SIDVHQNPCQSRHAS EMTSE LLVKDGVVQEASSSSS
Sbjct: 87  KSIDDVWSEIGHNDQQNPLPQASIDVHQNPCQSRHASEEMTSEGLLVKDGVVQEASSSSS 146

Query: 150 SSMKQ 155
            SM+Q
Sbjct: 147 DSMEQ 151

[Close]

BLAST of CsGy6G012590 vs. TrEMBL
Match: tr|A0A1S4E244|A0A1S4E244_CUCME (ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC107991613 PE=4 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 5.4e-32
Identity = 83/124 (66.94%), Postives = 89/124 (71.77%), Query Frame = 0


Query: 19  LHHSTMGVFKPIQHKKILPAVSTVEEDIQTQFLSPSQQIEPQNHH-PFLLPHNSTPNLCS 78
           LHH     F+   ++KIL           TQF S SQQ EP +HH PF++P NS   LCS
Sbjct: 19  LHHLPRNSFR---NRKIL----------HTQFHSLSQQNEPHSHHNPFMVPDNS---LCS 78

Query: 79  QGSSSIP-FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLV 138
            GS SIP FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDV QNPCQSRHA GEMTSED LV
Sbjct: 79  PGSLSIPIFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVQQNPCQSRHAFGEMTSEDFLV 126

Query: 139 KDGV 141
           K GV
Sbjct: 139 KAGV 126

[Close]

BLAST of CsGy6G012590 vs. TrEMBL
Match: tr|A0A1S4E242|A0A1S4E242_CUCME (Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC107991613 PE=4 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 2.7e-31
Identity = 83/126 (65.87%), Postives = 89/126 (70.63%), Query Frame = 0


Query: 19  LHHSTMGVFKPIQHKKILPAVSTVEEDIQTQFLSPSQQIEPQNHH-PFLLPHNSTPNLCS 78
           LHH     F+   ++KIL           TQF S SQQ EP +HH PF++P NS   LCS
Sbjct: 19  LHHLPRNSFR---NRKIL----------HTQFHSLSQQNEPHSHHNPFMVPDNS---LCS 78

Query: 79  QGSSSIP-FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLV 138
            GS SIP FPLCFKSIDDIWSEIDHKDQQNPHPQHSIDV QNPCQSRHA  EMTSED LV
Sbjct: 79  PGSLSIPIFPLCFKSIDDIWSEIDHKDQQNPHPQHSIDVQQNPCQSRHAFREMTSEDFLV 128

Query: 139 KDGVVQ 143
           K G VQ
Sbjct: 139 KAGDVQ 128

[Close]

BLAST of CsGy6G012590 vs. TrEMBL
Match: tr|A0A1S3C9E3|A0A1S3C9E3_CUCME (ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103497935 PE=4 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 6.0e-31
Identity = 75/111 (67.57%), Postives = 88/111 (79.28%), Query Frame = 0


Query: 44  EDIQTQFLSPSQQIEPQNHHPFLLPHNSTPNLCSQGSSSIPFPLCFKSIDDIWSEIDHKD 103
           EDIQTQF S SQ+ EPQNHHPF++ +NS  NLC+QGS SIP PLC K++D+IWSEI HKD
Sbjct: 56  EDIQTQFHSQSQENEPQNHHPFMVTNNSRSNLCNQGSFSIPIPLCGKTVDEIWSEI-HKD 115

Query: 104 QQNPHPQHSIDVHQNPCQSRHASGEMTSEDLLVKDGVVQEASSSSSSSMKQ 155
           QQ+P  Q  I+V QNPCQ++ A GEMT ED LVK GVVQEASSSS S  +Q
Sbjct: 116 QQHPRHQKFINVQQNPCQNQQALGEMTLEDFLVKAGVVQEASSSSCSMKQQ 165

The following BLAST results are available for this feature:

BLAST of CsGy6G012590 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46953.1	1.8e-74	94.81	hypothetical protein Csa_6G152390 [Cucumis sativus]	[more]
KGN46952.1	1.6e-48	80.80	hypothetical protein Csa_6G152380 [Cucumis sativus]	[more]
XP_016902297.1	8.2e-32	66.94	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 [Cucumis melo]	[more]
XP_016902296.1	4.1e-31	65.87	PREDICTED: putative protein TPRXL isoform X1 [Cucumis melo]	[more]
XP_008458572.2	9.1e-31	67.57	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 1 [Cucumis melo]	[more]

BLAST of CsGy6G012590 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G44460.1	9.1e-09	45.45	Basic-leucine zipper (bZIP) transcription factor family protein	[more]

BLAST of CsGy6G012590 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RYD6\|AI5L1_ARATH	1.6e-07	45.45	ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=DP...	[more]
sp\|Q8RZ35\|ABI5_ORYSJ	1.8e-06	39.73	bZIP transcription factor ABI5 homolog OS=Oryza sativa subsp. japonica OX=39947 ...	[more]

BLAST of CsGy6G012590 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KBT4\|A0A0A0KBT4_CUCSA	1.2e-74	94.81	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152390 PE=4 SV=1	[more]
tr\|A0A0A0KEX6\|A0A0A0KEX6_CUCSA	1.1e-48	80.80	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G152380 PE=4 SV=1	[more]
tr\|A0A1S4E244\|A0A1S4E244_CUCME	5.4e-32	66.94	ABSCISIC ACID-INSENSITIVE 5-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN...	[more]
tr\|A0A1S4E242\|A0A1S4E242_CUCME	2.7e-31	65.87	Uncharacterized protein OS=Cucumis melo OX=3656 GN=LOC107991613 PE=4 SV=1	[more]
tr\|A0A1S3C9E3\|A0A1S3C9E3_CUCME	6.0e-31	67.57	ABSCISIC ACID-INSENSITIVE 5-like protein 1 OS=Cucumis melo OX=3656 GN=LOC1034979...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003700	transcription factor activity, sequence-specific DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G012590.1	CsGy6G012590.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..128
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..154
None	No IPR available	PANTHER	PTHR22952	CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED	coord: 51..150
None	No IPR available	PANTHER	PTHR22952:SF119	ABSCISIC ACID-INSENSITIVE 5-LIKE PROTEIN 1	coord: 51..150

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G012590	Cucumber (Gy14) v2	cgybcgybB102
CsGy6G012590	Cucurbita maxima (Rimu)	cgybcmaB730
CsGy6G012590	Cucurbita maxima (Rimu)	cgybcmaB802
CsGy6G012590	Cucurbita maxima (Rimu)	cgybcmaB820
CsGy6G012590	Cucurbita maxima (Rimu)	cgybcmaB862
CsGy6G012590	Cucurbita moschata (Rifu)	cgybcmoB715
CsGy6G012590	Cucurbita moschata (Rifu)	cgybcmoB780
CsGy6G012590	Cucurbita moschata (Rifu)	cgybcmoB799
CsGy6G012590	Cucurbita moschata (Rifu)	cgybcmoB844
CsGy6G012590	Cucurbita pepo (Zucchini)	cgybcpeB758
CsGy6G012590	Cucurbita pepo (Zucchini)	cgybcpeB811
CsGy6G012590	Cucurbita pepo (Zucchini)	cgybcpeB827
CsGy6G012590	Cucurbita pepo (Zucchini)	cgybcpeB856
CsGy6G012590	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G012590	Bottle gourd (USVL1VR-Ls)	cgyblsiB377
CsGy6G012590	Bottle gourd (USVL1VR-Ls)	cgyblsiB399
CsGy6G012590	Melon (DHL92) v3.5.1	cgybmeB365
CsGy6G012590	Melon (DHL92) v3.5.1	cgybmeB425
CsGy6G012590	Melon (DHL92) v3.6.1	cgybmedB366
CsGy6G012590	Watermelon (Charleston Gray)	cgybwcgB393
CsGy6G012590	Watermelon (Charleston Gray)	cgybwcgB401
CsGy6G012590	Watermelon (Charleston Gray)	cgybwcgB427
CsGy6G012590	Watermelon (97103) v1	cgybwmB424
CsGy6G012590	Watermelon (97103) v1	cgybwmB473
CsGy6G012590	Watermelon (97103) v1	cgybwmB478
CsGy6G012590	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G012590	Wild cucumber (PI 183967)	cgybcpiB290
CsGy6G012590	Silver-seed gourd	carcgybB0265
CsGy6G012590	Silver-seed gourd	carcgybB0422
CsGy6G012590	Silver-seed gourd	carcgybB0915
CsGy6G012590	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G012590	Cucumber (Chinese Long) v3	cgybcucB299
CsGy6G012590	Watermelon (97103) v2	cgybwmbB399
CsGy6G012590	Watermelon (97103) v2	cgybwmbB406
CsGy6G012590	Wax gourd	cgybwgoB579