CsGy6G012340 (gene) Cucumber (Gy14) v2

NameCsGy6G012340
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionUnknown Protein
LocationChr6 : 10734684 .. 10735041 (+)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GGCCCAATCACAACACGCCACGTAAGAACATGATCCCGAACAAAAGAGCACCTCCAAACGGTACGAACGAAACGCCACTTTCAACGTCGTTTTAAGCACAACCGCATATCTAAATCCATCCACATGACATACGTATATTAAATATATTTATTTATTTTACAATTTTCATAGTCCCGTCACCGCCGCTGTTCGTGTTACCAACCATCGCCGCCGCCGCCGCCATCGACGCTGCCGCCAAGACTTTTTCACCAATCATACGGCGGCTCAGATCAAAACGAAAAAAACGGAAAACAAACAGAAGGCGGTTTTGGGGAATATTCTAGAATATTCTTCTTCCTCTCCAGCCGTTGAGAAAATA

mRNA sequence

GGCCCAATCACAACACGCCACGTAAGAACATGATCCCGAACAAAAGAGCACCTCCAAACGGTACGAACGAAACGCCACTTTCAACGTCTCCCGTCACCGCCGCTGTTCGTGTTACCAACCATCGCCGCCGCCGCCGCCATCGACGCTGCCGCCAAGACTTTTTCACCAATCATACGGCGGCTCAGATCAAAACGAAAAAAACGGAAAACAAACAGAAGGCGGTTTTGGGGAATATTCTAGAATATTCTTCTTCCTCTCCAGCCGTTGAGAAAATA

Coding sequence (CDS)

ATGATCCCGAACAAAAGAGCACCTCCAAACGGTACGAACGAAACGCCACTTTCAACGTCTCCCGTCACCGCCGCTGTTCGTGTTACCAACCATCGCCGCCGCCGCCGCCATCGACGCTGCCGCCAAGACTTTTTCACCAATCATACGGCGGCTCAGATCAAAACGAAAAAAACGGAAAACAAACAGAAGGCGGTTTTGGGGAATATTCTAGAATATTCTTCTTCCTCTCCAGCCGTTGAGAAAATA

Protein sequence

MIPNKRAPPNGTNETPLSTSPVTAAVRVTNHRRRRRHRRCRQDFFTNHTAAQIKTKKTENKQKAVLGNILEYSSSSPAVEKI
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G012340.1CsGy6G012340.1mRNA


Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..26
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..37

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsGy6G012340Wild cucumber (PI 183967)cgybcpiB286
CsGy6G012340Wild cucumber (PI 183967)cgybcpiB288
CsGy6G012340Wild cucumber (PI 183967)cgybcpiB290
CsGy6G012340Silver-seed gourdcarcgybB0265
CsGy6G012340Silver-seed gourdcarcgybB0422
CsGy6G012340Silver-seed gourdcarcgybB0915
CsGy6G012340Cucumber (Chinese Long) v3cgybcucB297
CsGy6G012340Cucumber (Chinese Long) v3cgybcucB298
CsGy6G012340Cucumber (Chinese Long) v3cgybcucB299
CsGy6G012340Watermelon (97103) v2cgybwmbB399
CsGy6G012340Watermelon (97103) v2cgybwmbB406
CsGy6G012340Watermelon (97103) v2cgybwmbB432
CsGy6G012340Wax gourdcgybwgoB579
CsGy6G012340Wax gourdcgybwgoB603
CsGy6G012340Cucumber (Gy14) v2cgybcgybB102
CsGy6G012340Cucumber (Gy14) v2cgybcgybB150
CsGy6G012340Cucumber (Gy14) v2cgybcgybB151
CsGy6G012340Cucurbita maxima (Rimu)cgybcmaB730
CsGy6G012340Cucurbita maxima (Rimu)cgybcmaB770
CsGy6G012340Cucurbita maxima (Rimu)cgybcmaB802
CsGy6G012340Cucurbita maxima (Rimu)cgybcmaB820
CsGy6G012340Cucurbita maxima (Rimu)cgybcmaB862
CsGy6G012340Cucurbita moschata (Rifu)cgybcmoB715
CsGy6G012340Cucurbita moschata (Rifu)cgybcmoB752
CsGy6G012340Cucurbita moschata (Rifu)cgybcmoB780
CsGy6G012340Cucurbita moschata (Rifu)cgybcmoB799
CsGy6G012340Cucurbita moschata (Rifu)cgybcmoB844
CsGy6G012340Cucurbita pepo (Zucchini)cgybcpeB709
CsGy6G012340Cucurbita pepo (Zucchini)cgybcpeB758
CsGy6G012340Cucurbita pepo (Zucchini)cgybcpeB811
CsGy6G012340Cucurbita pepo (Zucchini)cgybcpeB827
CsGy6G012340Cucurbita pepo (Zucchini)cgybcpeB856
CsGy6G012340Cucumber (Chinese Long) v2cgybcuB280
CsGy6G012340Cucumber (Chinese Long) v2cgybcuB282
CsGy6G012340Cucumber (Chinese Long) v2cgybcuB284
CsGy6G012340Bottle gourd (USVL1VR-Ls)cgyblsiB377
CsGy6G012340Bottle gourd (USVL1VR-Ls)cgyblsiB399
CsGy6G012340Bottle gourd (USVL1VR-Ls)cgyblsiB412
CsGy6G012340Bottle gourd (USVL1VR-Ls)cgyblsiB421
CsGy6G012340Melon (DHL92) v3.5.1cgybmeB363
CsGy6G012340Melon (DHL92) v3.5.1cgybmeB365
CsGy6G012340Melon (DHL92) v3.5.1cgybmeB448
CsGy6G012340Melon (DHL92) v3.5.1cgybmeB425
CsGy6G012340Melon (DHL92) v3.6.1cgybmedB364
CsGy6G012340Melon (DHL92) v3.6.1cgybmedB366
CsGy6G012340Melon (DHL92) v3.6.1cgybmedB422
CsGy6G012340Melon (DHL92) v3.6.1cgybmedB446
CsGy6G012340Watermelon (Charleston Gray)cgybwcgB393
CsGy6G012340Watermelon (Charleston Gray)cgybwcgB401
CsGy6G012340Watermelon (Charleston Gray)cgybwcgB427
CsGy6G012340Watermelon (Charleston Gray)cgybwcgB434
CsGy6G012340Watermelon (97103) v1cgybwmB424
CsGy6G012340Watermelon (97103) v1cgybwmB462
CsGy6G012340Watermelon (97103) v1cgybwmB473
CsGy6G012340Watermelon (97103) v1cgybwmB478