CsGy6G010340 (gene) Cucumber (Gy14) v2

Overview
NameCsGy6G010340
Typegene
OrganismCucumis sativus (Cucumber (Gy14) v2)
DescriptionDNA polymerase
LocationChr6 : 8816147 .. 8819909 (-)
Genome Viewer
Gene Expression
   



Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCATATTGCAAAAGCTTCGTCATCTTCTTCATATATACTAATCCACAGTCTGTTGGCTGGCAACCCAAATCTGGAAGGGACAAAAAGAAACCAAGAGTAAGTTTATTATGTGAAATGTTCTCCGTCATCCAATGAAATCTAAAGCACTAAACTAAACGACATGCTTATCGATCACAATATATTAGTCCAGCTAACCTAGAAATGTTAGTAGCTAAATTGAGAAAGTTGTGATAATATTCCTATTCTAGAATTTTATGTTCAAGAAACTCCGCGCTTGCATGTAATCAGCAGTGGTAATAATATTTGTTTGATGAGAAATCTGGTCCTGCTTCAATTTGAACTGAGCTTGGACTTTTTTTACATTTTTTTGGAATCCACAAATATTGTGATAATTCATTCATACTCAACGGTTGTCAGCTCCCATGCCCACTTAATTGCTTCTTTCTTGAAGTAATCACCAAAACTGAAGTTTCCAAGCATCTCAAAGAACGTATGATGCCTAGCCGTTCTACCAACATTCTCCACATCATTTGTACGTAGGCACCTTTGTGAAGTTGTAGCACAAGGCACCAGTCTAGGTACCTAAAAGATGGTTATGATGAAAATGAAGTTGAAGTTTATAGAATTTAAACTAGCTCAAGATTAAACATAAACAATTGTTATTTCAGGAAGATAAACAACAAAATAATCTAATCCAACAAAAGAAAAGGAGTAAGAAAGAAAGAGACAAAATAATAACTTAGAAAGAGACAAAATAATAACTTTATAAAAGCTCAATAGATATAATAAAGGAAAGAATTTCCAGGATATAATCAAAGTTATATACTTTTACCCCAAGATAAATATTGTACACAACCTTGGTGCCTTATTTTGAAATTTATATGGTGAATAGTCTAAAAAAAACCTAATCTCTTATTTTACTATTAGGATCTAAATTATCTTTGCTCCTACAGTTCCTCTTCCAAGGCATCCAGATACTGATGGAGACAATGTAAGAAAGACATGAAACCATTTTCCAAAGGGTACAGGATGTGTACACAACCTATATAATTTTATTAAAATATATAGATCTTTTAAGTTATGATAGCATTTTAGATCAAACACGAAAGATAATATACTGTATAATATCTATGAGATATTAAAGAAATAAAATGTAAAAAAATACAATTTTTTATTTTTTAGAAAGAGAAAAACAAAACAAAAAAGAGAAGTGTTATAGTATATATCTAACTAAAAGAGTTCTTTAGTCTTTTGTCCTTTATTGTAACATACTAGTCTTTATATAAGGTTTCCATTGATGCCTATATATACTGAATTCTATTGATAGAATGAAGTAAAGGAGTTATTTTATATTTCGCTCTAACTACAACATGGTATCAGAGCCATCCAGGGTTTAGAACATTCGTTTATTTGTTTATTCTTTGACAGCTACATTTTGTTAGGGTTTAAGTTCGGGTCACAAAGTTCAAGTGGTCGTTTGTTGACACCACCACCTTTGAAGGAGCACCGCCGTTGTCCCCCTCTGTCTGAGTTCATCGCTCGCAGGAAGAAGTCGTGTGTGAGCTTCACACGCAGCCAGAATACACTGCCTCAAATCTTGTTTTCTGGTCAGTTTGTGCCTTCAGTTTCATTAAAATCCATGTGGGTATGACGATATTCGAAGAAAATTCACTTGGTTCTAGGGGTTGTGGCTGTTTTGTTCTATTTTATTGTCATTCTTTGCTCGTTTTGTGGCTGTTTTTTGCTCGTTTGGTCTGGTGTGGGTTGTTGGTGTCCTATGGCCGAACAAGATCCCATAGTGATCTCTAATTTGGTGCAATTGCGTCATCAATCTATCCATGGTTTGCCTACTAAATTTCAAGAGTACCAAAACTCGTTAAAAGCATCTTCTTCATAATTAGATGTCCCCCTATTACAACCATTGCTAATTCAGATTGTCATGCCCCCACCCAAAATGCCTTCCTCTTAAGTTTTAGGTGTGGTCGTGACTTGAGCAGCCTCACTGCTTCTAAGTGAAAATGCCAGAACGCCCGTGCTTAAACTCAACTTCTTAATAACATGCACGACGTTAACAAATAGTACACTTCAAACTTAAGAATAACTTAACAACTTTATTATCTTTAAACAACCTGATACATATACAAATAACGCTTCTAAAGAAACTAAAACTAAAGCTTCAGGCTCTCAACACCTATCAACTTACCTTATCTTAGCAGCCTCCTAGCTCAGCTTACCTGAGGAAGGGAAACTTAAAACATAAGTCTAATGCTTAGTGAGTGATAATTTAGGAAACCTTTTGGGAATACAATAGCATACAATAAAAACTTTCTCATTTTCAGAAATGTCTTAACGCGTCATCACACATTAAACAACACATGTCACATTAGCCTCTAATTATTTATGTCGCCTGGATATTGAACTTCCTCAACCCATAGACTACTATCTATGATGACTCATTTCACCATCAGTATCTCTGCAAACCGTCGCTCAATTCCAGTTGCTCTTGCGATAGACTTGAATACAGATCACTCAACGCATTCAGCCATCCTTCTACCAAACGGACCACTCAACACAAGGCAGCCTCTACTCTCATATGCACACGGTAGCTAGCTCTTGATAGAAATAAAGCTAATGGTTTACTCACATACAAGCATTACAAGCATTATAAGAAATCTATACTTTAACTCGTAAATATGCTTTTCAACAGTCATGCTTCTCATTAAAAAAAATTCTAAATAAGATTACAACATGTAACATGCTATACAACATGACTTTAAATAGAAAGCTTAAGAAACTTTGCTCTTTCTTTAGAAGAGTCACTCACAAAACTAAACACTTCCTTCCCTTCTACTCCCTTCCTATCGCCTGACTTCACAATTTTCTCTTCTCGCTCGAACCTTCTTTTGACAGAACTTAAGCTCCGCACTTCTTCCATTAACATCGTTTTCAATACATTTAATTTGAATTGGAATTTTCTGCATCATAATTATCACAATAATTCTTGTGAAGAAACACCTACAAGAATTAGTCTTGGACCTTTTTTTTGTTTTTAAATGTATGTATAGCCAAAAATAGACCACACTTAGAATCGGGTGAAATTATAAATGTTCAAGTTGATTATGTAGTAATAAGAAATGATCAATCTGGTACTTTAATCTTTCCCACAGGAAAGTTCATCGAAATAGCTAGGTTACAAGATAATCCCTTGAGGGGTTATTTGTTTGAGAAGAAGTCAAGTCCTTTCGACGGGGTATTCTCCAACCTCTATCAAAACCGACTAGAAGCTAAGAAAAGAGGGGATGAACCCATGACATGGATTTACAAAGTTCTAATGAACTCCTTATACAGAAGATTTTGGATTAATCCAAAAAGTACAGTAATTGAAATCTGCAATCACAGGGAATACTTGGAATTGTTGAAGAAAGATAATTTTCAATCCGCAGAAAAGCTTACCGATTACTACTATGTTGTGAATAACAGTAGTAATAGTAGCTTAGGAGACGACCATAACTGGAAAGCTCCTAGGATGTCTCCAGTTCAATTGGCTGCCATTATAACAGCTTGTGCTCGTATCCACATGTATCCCCACATTTACCGACTTGACTGTTACTATACAGACATTGATTCAATTATTCTTGGAAGTCCTCTTCCTGATGATTTAGTCTCTCCTGTGGAAATTGGTAAATTTAAACTTGAGAACCATGTGAAGAAAGGCATTTTCTTAGCACCAAAAAGCTATACCTCATCTATCGAGGATTAA

mRNA sequence

ATGCCATATTGCAAAAGCTTCGTCATCTTCTTCATATATACTAATCCACAGTCTGTTGGCTGGCAACCCAAATCTGGAAGGGACAAAAAGAAACCAAGAGAAGATAAACAACAAAATAATCTAATCCAACAAAAGAAAAGGATTCCTCTTCCAAGGCATCCAGATACTGATGGAGACAATGAGCACCGCCGTTGTCCCCCTCTGTCTGAGTTCATCGCTCGCAGGAAGAAGTCGTGTGTGAGCTTCACACGCAGCCAGAATACACTGCCTCAAATCTTGTTTTCTGCCAAAAATAGACCACACTTAGAATCGGGTGAAATTATAAATGTTCAAGTTGATTATGTAGTAATAAGAAATGATCAATCTGGTACTTTAATCTTTCCCACAGGAAAGTTCATCGAAATAGCTAGGTTACAAGATAATCCCTTGAGGGGTTATTTGTTTGAGAAGAAGTCAAGTCCTTTCGACGGGGTATTCTCCAACCTCTATCAAAACCGACTAGAAGCTAAGAAAAGAGGGGATGAACCCATGACATGGATTTACAAAGTTCTAATGAACTCCTTATACAGAAGATTTTGGATTAATCCAAAAAGTACAGTAATTGAAATCTGCAATCACAGGGAATACTTGGAATTGTTGAAGAAAGATAATTTTCAATCCGCAGAAAAGCTTACCGATTACTACTATGTTGTGAATAACAGTAGTAATAGTAGCTTAGGAGACGACCATAACTGGAAAGCTCCTAGGATGTCTCCAGTTCAATTGGCTGCCATTATAACAGCTTGTGCTCGTATCCACATGTATCCCCACATTTACCGACTTGACTGTTACTATACAGACATTGATTCAATTATTCTTGGAAGTCCTCTTCCTGATGATTTAGTCTCTCCTGTGGAAATTGGTAAATTTAAACTTGAGAACCATGTGAAGAAAGGCATTTTCTTAGCACCAAAAAGCTATACCTCATCTATCGAGGATTAA

Coding sequence (CDS)

ATGCCATATTGCAAAAGCTTCGTCATCTTCTTCATATATACTAATCCACAGTCTGTTGGCTGGCAACCCAAATCTGGAAGGGACAAAAAGAAACCAAGAGAAGATAAACAACAAAATAATCTAATCCAACAAAAGAAAAGGATTCCTCTTCCAAGGCATCCAGATACTGATGGAGACAATGAGCACCGCCGTTGTCCCCCTCTGTCTGAGTTCATCGCTCGCAGGAAGAAGTCGTGTGTGAGCTTCACACGCAGCCAGAATACACTGCCTCAAATCTTGTTTTCTGCCAAAAATAGACCACACTTAGAATCGGGTGAAATTATAAATGTTCAAGTTGATTATGTAGTAATAAGAAATGATCAATCTGGTACTTTAATCTTTCCCACAGGAAAGTTCATCGAAATAGCTAGGTTACAAGATAATCCCTTGAGGGGTTATTTGTTTGAGAAGAAGTCAAGTCCTTTCGACGGGGTATTCTCCAACCTCTATCAAAACCGACTAGAAGCTAAGAAAAGAGGGGATGAACCCATGACATGGATTTACAAAGTTCTAATGAACTCCTTATACAGAAGATTTTGGATTAATCCAAAAAGTACAGTAATTGAAATCTGCAATCACAGGGAATACTTGGAATTGTTGAAGAAAGATAATTTTCAATCCGCAGAAAAGCTTACCGATTACTACTATGTTGTGAATAACAGTAGTAATAGTAGCTTAGGAGACGACCATAACTGGAAAGCTCCTAGGATGTCTCCAGTTCAATTGGCTGCCATTATAACAGCTTGTGCTCGTATCCACATGTATCCCCACATTTACCGACTTGACTGTTACTATACAGACATTGATTCAATTATTCTTGGAAGTCCTCTTCCTGATGATTTAGTCTCTCCTGTGGAAATTGGTAAATTTAAACTTGAGAACCATGTGAAGAAAGGCATTTTCTTAGCACCAAAAAGCTATACCTCATCTATCGAGGATTAA

Protein sequence

MPYCKSFVIFFIYTNPQSVGWQPKSGRDKKKPREDKQQNNLIQQKKRIPLPRHPDTDGDNEHRRCPPLSEFIARRKKSCVSFTRSQNTLPQILFSAKNRPHLESGEIINVQVDYVVIRNDQSGTLIFPTGKFIEIARLQDNPLRGYLFEKKSSPFDGVFSNLYQNRLEAKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYYYVVNNSSNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIILGSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSYTSSIED
Homology
[Close]
BLAST of CsGy6G010340 vs. NCBI nr
Match: PIA41059.1 (hypothetical protein AQUCO_02300090v1 [Aquilegia coerulea])

HSP 1 Score: 290.0 bits (741), Expect = 9.8e-75
Identity = 142/220 (64.55%), Postives = 167/220 (75.91%), Query Frame = 0 

Query: 120 DQSGTLIFPTGKFIEIARLQD-----------NPLRGYLFEKKSSPFDGVFSNLYQNRLE 179
           D+SGTL+FPTGKFI +   ++            PLRGYLF+KK SPFDG  S LY++RLE
Sbjct: 460 DKSGTLLFPTGKFIGVFYSEELKFARELGYHVIPLRGYLFDKKESPFDGFISQLYESRLE 519

Query: 180 AKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYY 239
           AKK GDE MT+IYK+LMNSLY RF +NP+STV EICN ++Y EL+KKDNFQSAEKLTD+Y
Sbjct: 520 AKKDGDEAMTFIYKILMNSLYGRFGMNPESTVTEICNQKKYSELMKKDNFQSAEKLTDHY 579

Query: 240 XXXXXXXNSSLGD--DHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIIL 299
                  N S  D  D +WK P+M  V L+A ITACARIHMYP+I R DCYYTD DSI+L
Sbjct: 580 YIVNYVSNKSFADNNDDDWKVPKMMAVHLSAAITACARIHMYPYISRTDCYYTDTDSIVL 639

Query: 300 GSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSYTSSIED 327
           GSPLPDD++S +E+GKFKLE HVKKGIFLAPKSY   IED
Sbjct: 640 GSPLPDDMISSMELGKFKLECHVKKGIFLAPKSYMLEIED 679

[Close]
BLAST of CsGy6G010340 vs. NCBI nr
Match: XP_020081270.1 (uncharacterized protein LOC109704898 [Ananas comosus] >XP_020081550.1 uncharacterized protein LOC109705221 [Ananas comosus] >XP_020081811.1 uncharacterized protein LOC109705488 [Ananas comosus] >XP_020082478.1 uncharacterized protein LOC109706083 [Ananas comosus])

HSP 1 Score: 284.3 bits (726), Expect = 5.4e-73
Identity = 139/212 (65.57%), Postives = 163/212 (76.89%), Query Frame = 0 

Query: 120 DQSGTLIFPTGKFIEIARLQD-----------NPLRGYLFEKKSSPFDGVFSNLYQNRLE 179
           D+ GTLIFPTGKFI I   ++            PLRGYLFE  SSPF+G+ S+LY++RLE
Sbjct: 250 DKFGTLIFPTGKFIGIFYSEELKFARDLGYHIIPLRGYLFEAMSSPFEGIISDLYESRLE 309

Query: 180 AKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYY 239
           AKKRGDEPMT+IYK+LMNSLY RF +NP+STV EICN + Y EL+K DNFQSAE LT+ Y
Sbjct: 310 AKKRGDEPMTFIYKILMNSLYGRFGMNPESTVTEICNQKRYEELMKMDNFQSAEMLTENY 369

Query: 240 XXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIILGS 299
                  NSS  +D NWKAP+MS VQLAA +TACARIHMYP+I R DCYYTD DS++LG 
Sbjct: 370 YIVNYITNSSFAEDDNWKAPKMSAVQLAAAVTACARIHMYPYISRPDCYYTDTDSVVLGC 429

Query: 300 PLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 321
           PL DDL+S +E+GKFKLE  VKKGIFLAPKSY
Sbjct: 430 PLSDDLISSMEMGKFKLEYFVKKGIFLAPKSY 461

[Close]
BLAST of CsGy6G010340 vs. NCBI nr
Match: XP_020111088.1 (uncharacterized protein LOC109726069 [Ananas comosus])

HSP 1 Score: 284.3 bits (726), Expect = 5.4e-73
Identity = 139/212 (65.57%), Postives = 163/212 (76.89%), Query Frame = 0 

Query: 120 DQSGTLIFPTGKFIEIARLQD-----------NPLRGYLFEKKSSPFDGVFSNLYQNRLE 179
           D+ GTLIFPTGKFI I   ++            PLRGYLFE  SSPF+G+ S+LY++RLE
Sbjct: 250 DKFGTLIFPTGKFIGIFYSEELKFARDLGYHIIPLRGYLFEAMSSPFEGIISDLYESRLE 309

Query: 180 AKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYY 239
           AKKRGDEPMT+IYK+LMNSLY RF +NP+STV EICN + Y EL+K DNFQSAE LT+ Y
Sbjct: 310 AKKRGDEPMTFIYKILMNSLYGRFGMNPESTVTEICNQKRYEELMKMDNFQSAEMLTENY 369

Query: 240 XXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIILGS 299
                  NSS  +D NWKAP+MS VQLAA +TACARIHMYP+I R DCYYTD DS++LG 
Sbjct: 370 YIVNYITNSSFAEDDNWKAPKMSAVQLAAAVTACARIHMYPYISRPDCYYTDTDSVVLGC 429

Query: 300 PLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 321
           PL DDL+S +E+GKFKLE  VKKGIFLAPKSY
Sbjct: 430 PLSDDLISSMEMGKFKLEYFVKKGIFLAPKSY 461

[Close]
BLAST of CsGy6G010340 vs. NCBI nr
Match: EPS72962.1 (hypothetical protein M569_01793, partial [Genlisea aurea])

HSP 1 Score: 260.0 bits (663), Expect = 1.1e-65
Identity = 133/218 (61.01%), Postives = 161/218 (73.85%), Query Frame = 0 

Query: 120 DQSGTLIFPTGKFIEI--------AR---LQDNPLRGYLFEKKSSPFDGVFSNLYQNRLE 179
           ++ GTLIFPTG+F+ +        AR    Q  PLRGYLFEKK SPF G  S+LY++RL+
Sbjct: 322 NKDGTLIFPTGQFLGVYYSEELKYARNLGYQILPLRGYLFEKKPSPFSGFISDLYESRLD 381

Query: 180 AKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYY 239
           AKKRGDEPMT+IYK+LMNSLY RF INP+S V EICN +E  E LKK+NFQSAE L + Y
Sbjct: 382 AKKRGDEPMTFIYKILMNSLYGRFGINPESLVTEICNKKERDEYLKKENFQSAEMLNENY 441

Query: 240 XXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIILGS 299
                  N  + DD  WKAP+MS V LAA ITAC+RIHMYP+I R DCYYTD DS+ILG+
Sbjct: 442 YIVNYVTNCFI-DDEEWKAPKMSAVHLAAAITACSRIHMYPYICREDCYYTDTDSVILGN 501

Query: 300 PLPDDLVSPVEIGKFKLENHVKKGIFLAPKSYTSSIED 327
           PL  + +S  E+GK+KLEN+VKKGIFLAPKSY   +E+
Sbjct: 502 PLLANDISSTELGKWKLENNVKKGIFLAPKSYMLEVEE 538

[Close]
BLAST of CsGy6G010340 vs. NCBI nr
Match: XP_022975380.1 (uncharacterized protein LOC111474649 [Cucurbita maxima])

HSP 1 Score: 214.9 bits (546), Expect = 4.0e-52
Identity = 104/212 (49.06%), Postives = 143/212 (67.45%), Query Frame = 0 

Query: 120 DQSGTLIFPTGKFIEIARLQD-----------NPLRGYLFEKKSSPFDGVFSNLYQNRLE 179
           D++ TL+FP+G+F+ +   ++            P+ GYLF+K  SPF    S+L+++RLE
Sbjct: 467 DKNDTLLFPSGEFVGVYYTEELKYARDLGYTVLPISGYLFKKMESPFSSFVSSLFESRLE 526

Query: 180 AKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYY 239
           A+K G+E M+++YK+LMNSLY RF INPKST  EIC+   Y+ LL+   F   + L+D  
Sbjct: 527 ARKSGNEAMSYVYKILMNSLYGRFGINPKSTTTEICDEDRYMNLLRNSEFIFGDMLSDNT 586

Query: 240 XXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIILGS 299
                  N+  GDD+ W  P+ S VQLAA ITA ARIHMYP+I R DCYYTD DS++LG+
Sbjct: 587 YIVAYHSNTDKGDDY-WNPPKNSAVQLAAAITASARIHMYPYISREDCYYTDTDSVVLGN 646

Query: 300 PLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 321
           PLP++ +S   +GKFKLE+ + KG FLAPKSY
Sbjct: 647 PLPNEEISSSVLGKFKLEDRITKGYFLAPKSY 677

[Close]
BLAST of CsGy6G010340 vs. Swiss-Prot
Match: sp|P10582|DPOM_MAIZE (DNA polymerase OS=Zea mays OX=4577 PE=3 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.2e-36
Identity = 89/215 (41.40%), Postives = 127/215 (59.07%), Query Frame = 0 

Query: 123 GTLIFPTGKFIEIARLQD-----------NPLRGYLFEKKSSPFDGVFSNLYQNRLEAKK 182
           GT+IFPTG+F+ +   ++            P+ GY+F++K SPF     ++Y  RL+AK 
Sbjct: 559 GTIIFPTGRFLGVYFSEELKYAVSLGYKVYPICGYIFDRKESPFKRFVYDIYSKRLDAKA 618

Query: 183 RGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLEL-LKKDNF-QSAEKLTDYYX 242
           +G++ + +IYK+ MNSLY RF I+P+ST  +I +  E  +L L  D F QS E  +D   
Sbjct: 619 KGEKALDFIYKITMNSLYGRFGISPESTTTQIVSTEESRKLALYNDGFVQSYELSSDKCL 678

Query: 243 XXXXXXNS----SLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSII 302
                  S     L  D     P  + VQ++A +T  ARI M+P I R DCYYTD DS++
Sbjct: 679 VTCKNVRSLDLLKLSSDR----PTYAAVQISAAVTGYARIRMHPFISRDDCYYTDTDSVV 738

Query: 303 LGSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 321
           +   LP++ VSP  +GKFK E+ V+ GIFLAPKSY
Sbjct: 739 VERELPEEEVSPTALGKFKHEHFVEYGIFLAPKSY 769

[Close]
BLAST of CsGy6G010340 vs. Swiss-Prot
Match: sp|P33538|DPOM_NEUIN (Probable DNA polymerase OS=Neurospora intermedia OX=5142 PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.0e-11
Identity = 57/186 (30.65%), Postives = 83/186 (44.62%), Query Frame = 0 

Query: 143 LRGYLFEKKSSPFDGVFSNLYQNRLEAKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIE 202
           + GYLFE +SS FD     LY  +  + K  + P  +I K+LMNSLY RF +NP+   I 
Sbjct: 734 IEGYLFE-ESSMFDEYIDLLYNIKKNSPK--ESPWYYISKLLMNSLYGRFGLNPEGEEIF 793

Query: 203 ICNHREYLELLKKDNFQSAEKLTDYYXXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITAC 262
           I +  E   ++    + +   L+                D N   P      +++ I A 
Sbjct: 794 ITSEEEGDAIIATKEYVTITPLSSGNVLISAKLPEEAFGDMNISVP------ISSAIAAY 853

Query: 263 ARIHMYPHI--YRLDCYYTDIDSIILGSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 322
           +RIHM   +  Y  + YY D D I +   L  D V   E+GK K E   ++   L PK Y
Sbjct: 854 SRIHMSHFLTKYSNNIYYIDTDGIKVDIDLDKDEVDSKELGKMKYEYVFEEYTSLGPKVY 910

Query: 323 TSSIED 327
              + D
Sbjct: 914 GGLLYD 910

[Close]
BLAST of CsGy6G010340 vs. Swiss-Prot
Match: sp|P22373|DPOM_CLAPU (Probable DNA polymerase OS=Claviceps purpurea OX=5111 PE=3 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.8e-11
Identity = 59/231 (25.54%), Postives = 97/231 (41.99%), Query Frame = 0 

Query: 124 TLIFPTG-----------KFIEIARLQDNPLRGYLFEKKSSPFDGVFSNLYQNRLEAKKR 183
           +LIFP G           KF      +   ++GY F++ S+ F+     +Y+ +      
Sbjct: 730 SLIFPGGAWEGWYFSEELKFAVAHGYEVEIIKGYNFDRVSNVFNEFVQEVYKVKCNPNNV 789

Query: 184 GDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKL-------- 243
            ++    I K+++NSL  RF +N       +    ++ ELL     +S   L        
Sbjct: 790 TEKN---IAKLILNSLIGRFGMNINKIKTSLVPSEKHNELLTTRVVKSTTDLGSGMFMDI 849

Query: 244 ----------TDYYXXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRL 303
                      D+        NS+  D+          +  AA + + ARIHM   +  +
Sbjct: 850 YVPGIDKNICEDFNLDYIEVLNSTNTDEKGTMPDNNVSITTAAAVLSYARIHMAQIMLFI 909

Query: 304 -----DCYYTDIDSIILGSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 321
                  YYTD DSI+    LP+++V   EIGK KLE+ + +G F+A K+Y
Sbjct: 910 LENNGTLYYTDTDSIVTDLKLPEEMVHQTEIGKLKLEHTITQGYFIADKTY 957

[Close]
BLAST of CsGy6G010340 vs. Swiss-Prot
Match: sp|Q01529|DPOM_PODAS (Probable DNA polymerase OS=Podospora anserina OX=5145 PE=3 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.3e-11
Identity = 63/220 (28.64%), Postives = 104/220 (47.27%), Query Frame = 0 

Query: 131 KFIEIARLQDNPLRGYLFEKKSSPFDGVFSNLYQNRLEAKKRGDEPMTWIYKVLMNSLYR 190
           KF E+       ++GY F K  + F     +LY  +++A   G E +  I K L+NSL  
Sbjct: 748 KFAEVNGYNIEVIKGYQFNKIDNLFSSYVDDLY--KIKANSEGSEKL--ITKFLLNSLLG 807

Query: 191 RFWIN-----------PKSTVIEICNHREYL------ELLKKDNFQSAEKLTDYY---XX 250
           RF ++            K+  + + N+   +      ++L   N + + KL + +     
Sbjct: 808 RFGMSIFKLKTDIVSVEKAKKLAVTNYINSVKAISDTDVLISYNKEISRKLVEEHGLNYI 867

Query: 251 XXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRL-----DCYYTDIDSII 310
                NS L  + N  + +   V ++A +TA ARI M      +     + YYTD DSI+
Sbjct: 868 EILNSNSKLDLEKN-NSFKDVAVSISAAVTAYARIFMAQTKLDILKNGGNLYYTDTDSIV 927

Query: 311 LGSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSYTSSIE 326
               LPD+LV   E+G+FKLE  +K+G F++ K+Y   +E
Sbjct: 928 TDIDLPDNLVGS-ELGQFKLEFKLKEGFFISAKTYCLILE 961

[Close]
BLAST of CsGy6G010340 vs. Swiss-Prot
Match: sp|P22374|DPOM_ASCIM (Probable DNA polymerase OS=Ascobolus immersus OX=5191 PE=3 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.3e-09
Identity = 55/177 (31.07%), Postives = 83/177 (46.89%), Query Frame = 0 

Query: 146  YLFEKKSSPFDGVFSNLYQNRLEAKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICN 205
            YLFE+ +  F      LY   +++    D+PM +I K+LMNSLY RF ++P +    +  
Sbjct: 917  YLFERLNI-FKEYIHRLY--TIKSSYTPDDPMYFIAKLLMNSLYGRFGMDPITIKYSVLT 976

Query: 206  HREYLELLKKDNFQSAEKLTDYYXXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARI 265
              E  E LK  N    E  T          N  LG+  N      + V ++A I A +R+
Sbjct: 977  PEESEEKLK--NSSCIEATTLPSGNVLFKENKPLGEFSNLN----TSVPISAAIAAYSRM 1036

Query: 266  HMYPHI--YRLDCYYTDIDSIILGSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 321
             M  ++  Y  + Y  D D I + + +    VS  E+G  K E   K+ +F+APK Y
Sbjct: 1037 IMSEYLIKYADNLYAVDTDGIKVDTEIDKKYVSDKELGLMKHEYTFKEAVFVAPKVY 1084

[Close]
BLAST of CsGy6G010340 vs. TrEMBL
Match: tr|A0A2G5DC01|A0A2G5DC01_AQUCA (DNA polymerase OS=Aquilegia coerulea OX=218851 GN=AQUCO_02300090v1 PE=3 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 6.5e-75
Identity = 142/220 (64.55%), Postives = 167/220 (75.91%), Query Frame = 0 

Query: 120 DQSGTLIFPTGKFIEIARLQD-----------NPLRGYLFEKKSSPFDGVFSNLYQNRLE 179
           D+SGTL+FPTGKFI +   ++            PLRGYLF+KK SPFDG  S LY++RLE
Sbjct: 460 DKSGTLLFPTGKFIGVFYSEELKFARELGYHVIPLRGYLFDKKESPFDGFISQLYESRLE 519

Query: 180 AKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYY 239
           AKK GDE MT+IYK+LMNSLY RF +NP+STV EICN ++Y EL+KKDNFQSAEKLTD+Y
Sbjct: 520 AKKDGDEAMTFIYKILMNSLYGRFGMNPESTVTEICNQKKYSELMKKDNFQSAEKLTDHY 579

Query: 240 XXXXXXXNSSLGD--DHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIIL 299
                  N S  D  D +WK P+M  V L+A ITACARIHMYP+I R DCYYTD DSI+L
Sbjct: 580 YIVNYVSNKSFADNNDDDWKVPKMMAVHLSAAITACARIHMYPYISRTDCYYTDTDSIVL 639

Query: 300 GSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSYTSSIED 327
           GSPLPDD++S +E+GKFKLE HVKKGIFLAPKSY   IED
Sbjct: 640 GSPLPDDMISSMELGKFKLECHVKKGIFLAPKSYMLEIED 679

[Close]
BLAST of CsGy6G010340 vs. TrEMBL
Match: tr|S8EK46|S8EK46_9LAMI (DNA polymerase (Fragment) OS=Genlisea aurea OX=192259 GN=M569_01793 PE=3 SV=1)

HSP 1 Score: 260.0 bits (663), Expect = 7.1e-66
Identity = 133/218 (61.01%), Postives = 161/218 (73.85%), Query Frame = 0 

Query: 120 DQSGTLIFPTGKFIEI--------AR---LQDNPLRGYLFEKKSSPFDGVFSNLYQNRLE 179
           ++ GTLIFPTG+F+ +        AR    Q  PLRGYLFEKK SPF G  S+LY++RL+
Sbjct: 322 NKDGTLIFPTGQFLGVYYSEELKYARNLGYQILPLRGYLFEKKPSPFSGFISDLYESRLD 381

Query: 180 AKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYY 239
           AKKRGDEPMT+IYK+LMNSLY RF INP+S V EICN +E  E LKK+NFQSAE L + Y
Sbjct: 382 AKKRGDEPMTFIYKILMNSLYGRFGINPESLVTEICNKKERDEYLKKENFQSAEMLNENY 441

Query: 240 XXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIILGS 299
                  N  + DD  WKAP+MS V LAA ITAC+RIHMYP+I R DCYYTD DS+ILG+
Sbjct: 442 YIVNYVTNCFI-DDEEWKAPKMSAVHLAAAITACSRIHMYPYICREDCYYTDTDSVILGN 501

Query: 300 PLPDDLVSPVEIGKFKLENHVKKGIFLAPKSYTSSIED 327
           PL  + +S  E+GK+KLEN+VKKGIFLAPKSY   +E+
Sbjct: 502 PLLANDISSTELGKWKLENNVKKGIFLAPKSYMLEVEE 538

[Close]
BLAST of CsGy6G010340 vs. TrEMBL
Match: tr|Q6QZN8|Q6QZN8_DAUCA (DNA polymerase OS=Daucus carota OX=4039 GN=Dpo PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.9e-52
Identity = 111/223 (49.78%), Postives = 148/223 (66.37%), Query Frame = 0 

Query: 109 NVQVDYVVIRNDQSGTLIFPTGKFI------EIARLQD-----NPLRGYLFEKKSSPFDG 168
           +++  ++  R   +G+LIFPTG F+      E+   +D      PLRGYLF+K  SPF  
Sbjct: 331 SIKKPFLPYREKVNGSLIFPTGYFVGVYYSEELKYARDLGYTIYPLRGYLFKKTESPFKT 390

Query: 169 VFSNLYQNRLEAKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDN 228
             ++LY +RLEAKK G+E M+++YK+LMNSLY RF INPK T+ EICN   Y +L++KD 
Sbjct: 391 FVNDLYNSRLEAKKDGNEGMSYVYKILMNSLYGRFGINPKMTITEICNQDCYNQLVRKDT 450

Query: 229 FQSAEKLTDYYXXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCY 288
           F + +KL  Y           L  D +W  P+ + VQLAA ITACARIHMYP+I R DCY
Sbjct: 451 FINGDKL--YEDTYVANLKKDLSTD-SWDPPKNAAVQLAAAITACARIHMYPYIAREDCY 510

Query: 289 YTDIDSIILGSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 321
           YTD DSI+LG+PL DD+VS   +GK KLE+ +  G+FLAPK+Y
Sbjct: 511 YTDTDSIVLGNPLSDDMVSSSVLGKLKLEDQIAWGLFLAPKTY 550

[Close]
BLAST of CsGy6G010340 vs. TrEMBL
Match: tr|A0A175YDE1|A0A175YDE1_DAUCA (DNA polymerase OS=Daucus carota subsp. sativus OX=79200 GN=Dpo PE=3 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.9e-52
Identity = 111/223 (49.78%), Postives = 148/223 (66.37%), Query Frame = 0 

Query: 109 NVQVDYVVIRNDQSGTLIFPTGKFI------EIARLQD-----NPLRGYLFEKKSSPFDG 168
           +++  ++  R   +G+LIFPTG F+      E+   +D      PLRGYLF+K  SPF  
Sbjct: 609 SIKKPFLPYREKVNGSLIFPTGYFVGVYYSEELKYARDLGYTIYPLRGYLFKKTESPFKT 668

Query: 169 VFSNLYQNRLEAKKRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDN 228
             ++LY +RLEAKK G+E M+++YK+LMNSLY RF INPK T+ EICN   Y +L++KD 
Sbjct: 669 FVNDLYNSRLEAKKDGNEGMSYVYKILMNSLYGRFGINPKMTITEICNQDCYNQLVRKDT 728

Query: 229 FQSAEKLTDYYXXXXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCY 288
           F + +KL  Y           L  D +W  P+ + VQLAA ITACARIHMYP+I R DCY
Sbjct: 729 FINGDKL--YEDTYVANLKKDLSTD-SWDPPKNAAVQLAAAITACARIHMYPYIAREDCY 788

Query: 289 YTDIDSIILGSPLPDDLVSPVEIGKFKLENHVKKGIFLAPKSY 321
           YTD DSI+LG+PL DD+VS   +GK KLE+ +  G+FLAPK+Y
Sbjct: 789 YTDTDSIVLGNPLSDDMVSSSVLGKLKLEDQIAWGLFLAPKTY 828

[Close]
BLAST of CsGy6G010340 vs. TrEMBL
Match: tr|A0A101LW89|A0A101LW89_PICGL (DNA polymerase OS=Picea glauca OX=3330 GN=dpo PE=4 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 1.3e-51
Identity = 108/216 (50.00%), Postives = 141/216 (65.28%), Query Frame = 0 

Query: 122 SGTLIFPTGKFI------EIARLQD-----NPLRGYLFEKKSSPFDGVFSNLYQNRLEAK 181
           + TL+F TGKF+      E+   +D      PLRGYLFE+++SPF    S L+  R EAK
Sbjct: 322 NNTLLFATGKFVGVYYSEELKYARDLGYTIIPLRGYLFEERTSPFGSFVSELFSRRQEAK 381

Query: 182 KRGDEPMTWIYKVLMNSLYRRFWINPKSTVIEICNHREYLELLKKDNFQSAEKLTDYYXX 241
             G + M ++YK+LMNSLY RF INP+ST+ E+ N   Y  L + +N    +KL+D+Y  
Sbjct: 382 VSGHDAMAYVYKILMNSLYGRFGINPQSTITEVVNRERYDTLTQNENLIFGDKLSDHYYI 441

Query: 242 XXXXXNSSLGDDHNWKAPRMSPVQLAAIITACARIHMYPHIYRLDCYYTDIDSIILGSPL 301
                N+   DD +W  P +S VQLAA ITACARIHMY +  R DCYYTD DS +LGSPL
Sbjct: 442 VSYLSNTGQVDDLDWNPPSISAVQLAAAITACARIHMYKYTSRPDCYYTDTDSAVLGSPL 501

Query: 302 PDDLVSPVEIGKFKLENHVKKGIFLAPKSYTSSIED 327
           P+D VS +E+GK KLE  VK+GIFLA KSY+  +E+
Sbjct: 502 PEDEVSSIELGKCKLEYTVKQGIFLAAKSYSLLLEE 537

The following BLAST results are available for this feature:
BLAST of CsGy6G010340 vs. NCBI nr
Match NameE-valueIdentityDescription
PIA41059.19.8e-7564.55hypothetical protein AQUCO_02300090v1 [Aquilegia coerulea][more]
XP_020081270.15.4e-7365.57uncharacterized protein LOC109704898 [Ananas comosus] >XP_020081550.1 uncharacte... [more]
XP_020111088.15.4e-7365.57uncharacterized protein LOC109726069 [Ananas comosus][more]
EPS72962.11.1e-6561.01hypothetical protein M569_01793, partial [Genlisea aurea][more]
XP_022975380.14.0e-5249.06uncharacterized protein LOC111474649 [Cucurbita maxima][more]
BLAST of CsGy6G010340 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of CsGy6G010340 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|P10582|DPOM_MAIZE1.2e-3641.40DNA polymerase OS=Zea mays OX=4577 PE=3 SV=1[more]
sp|P33538|DPOM_NEUIN1.0e-1130.65Probable DNA polymerase OS=Neurospora intermedia OX=5142 PE=3 SV=1[more]
sp|P22373|DPOM_CLAPU1.8e-1125.54Probable DNA polymerase OS=Claviceps purpurea OX=5111 PE=3 SV=1[more]
sp|Q01529|DPOM_PODAS2.3e-1128.64Probable DNA polymerase OS=Podospora anserina OX=5145 PE=3 SV=1[more]
sp|P22374|DPOM_ASCIM1.3e-0931.07Probable DNA polymerase OS=Ascobolus immersus OX=5191 PE=3 SV=1[more]
BLAST of CsGy6G010340 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A2G5DC01|A0A2G5DC01_AQUCA6.5e-7564.55DNA polymerase OS=Aquilegia coerulea OX=218851 GN=AQUCO_02300090v1 PE=3 SV=1[more]
tr|S8EK46|S8EK46_9LAMI7.1e-6661.01DNA polymerase (Fragment) OS=Genlisea aurea OX=192259 GN=M569_01793 PE=3 SV=1[more]
tr|Q6QZN8|Q6QZN8_DAUCA5.9e-5249.78DNA polymerase OS=Daucus carota OX=4039 GN=Dpo PE=3 SV=1[more]
tr|A0A175YDE1|A0A175YDE1_DAUCA5.9e-5249.78DNA polymerase OS=Daucus carota subsp. sativus OX=79200 GN=Dpo PE=3 SV=1[more]
tr|A0A101LW89|A0A101LW89_PICGL1.3e-5150.00DNA polymerase OS=Picea glauca OX=3330 GN=dpo PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003887DNA-directed DNA polymerase activity
GO:0003677DNA binding
GO:0000166nucleotide binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Vocabulary: INTERPRO
TermDefinition
IPR023211DNA_pol_palm_dom_sf
IPR004868DNA-dir_DNA_pol_B_mt/vir
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071897 DNA biosynthetic process
biological_process GO:0006260 DNA replication
cellular_component GO:0016020 membrane
cellular_component GO:0005739 mitochondrion
molecular_function GO:0003677 DNA binding
molecular_function GO:0003887 DNA-directed DNA polymerase activity
molecular_function GO:0000166 nucleotide binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsGy6G010340.1CsGy6G010340.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004868DNA-directed DNA polymerase, family B, mitochondria/virusPFAMPF03175DNA_pol_B_2coord: 141..271
e-value: 1.4E-16
score: 60.3
IPR023211DNA polymerase, palm domain superfamilyGENE3DG3DSA:3.90.1600.10coord: 241..326
e-value: 2.3E-7
score: 32.4
NoneNo IPR availableGENE3DG3DSA:1.10.287.690coord: 157..190
e-value: 3.0E-5
score: 25.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 24..41
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 21..64
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 48..64
NoneNo IPR availableSUPERFAMILYSSF56672DNA/RNA polymerasescoord: 242..322
coord: 119..214