CsGy6G010230 (gene) Cucumber (Gy14) v2
The following sequences are available for this feature:
Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTGACAGGTTTTTTGTGGCCTATCCAATTTGTTCAGTCCAATCGAAACAATTCTTGGATGCCTAAATTAGAAAAACTACAAACAAGACGGCCTGGTTCTTTATCTGTGGCTGAGACTCTTGCTAAATGGAAAGATTACAATGATCACCTTGATTCATGTACTGATGAGCCAAAACTTACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCAGAAATTCGAGCACCGAATAGAGGAAGTCGGCTCTGGTTGGGTACATTTCCAACTGCGATTGATGCTGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTTAGCTCGCCTCAATTTTCCCAATGTCTCAATTCCAACCTTGCTAAAAGGAAAAGAATTATCAAGGAAGGATTCTCGTGATGAAATCAAAAGGCCTTCACTCTCTTTTTTAGGATCAACTTCACTTAGTCTGAGTTCTGAATCAACAATAACATCAGATCTGTCTGAGGATTGTGCAGTTGAAGATGTCTAG ATGCTGACAGGTTTTTTGTGGCCTATCCAATTTGTTCAGTCCAATCGAAACAATTCTTGGATGCCTAAATTAGAAAAACTACAAACAAGACGGCCTGGTTCTTTATCTGTGGCTGAGACTCTTGCTAAATGGAAAGATTACAATGATCACCTTGATTCATGTACTGATGAGCCAAAACTTACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCAGAAATTCGAGCACCGAATAGAGGAAGTCGGCTCTGGTTGGGTACATTTCCAACTGCGATTGATGCTGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTTAGCTCGCCTCAATTTTCCCAATGTCTCAATTCCAACCTTGCTAAAAGGAAAAGAATTATCAAGGAAGGATTCTCGTGATGAAATCAAAAGGCCTTCACTCTCTTTTTTAGGATCAACTTCACTTAGTCTGAGTTCTGAATCAACAATAACATCAGATCTGTCTGAGGATTGTGCAGTTGAAGATGTCTAG ATGCTGACAGGTTTTTTGTGGCCTATCCAATTTGTTCAGTCCAATCGAAACAATTCTTGGATGCCTAAATTAGAAAAACTACAAACAAGACGGCCTGGTTCTTTATCTGTGGCTGAGACTCTTGCTAAATGGAAAGATTACAATGATCACCTTGATTCATGTACTGATGAGCCAAAACTTACTCGTAGAGTTCCAGCCAAGGGATCGAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATATGCGATGTAATTACAGAGGAGTTAGGCAAAGGACATGGGGGAAGTGGGTTGCAGAAATTCGAGCACCGAATAGAGGAAGTCGGCTCTGGTTGGGTACATTTCCAACTGCGATTGATGCTGCACTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCACTTTAGCTCGCCTCAATTTTCCCAATGTCTCAATTCCAACCTTGCTAAAAGGAAAAGAATTATCAAGGAAGGATTCTCGTGATGAAATCAAAAGGCCTTCACTCTCTTTTTTAGGATCAACTTCACTTAGTCTGAGTTCTGAATCAACAATAACATCAGATCTGTCTGAGGATTGTGCAGTTGAAGATGTCTAG MLTGFLWPIQFVQSNRNNSWMPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCTDEPKLTRRVPAKGSKKGCMKGKGGPENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARLNFPNVSIPTLLKGKELSRKDSRDEIKRPSLSFLGSTSLSLSSESTITSDLSEDCAVEDV
BLAST of CsGy6G010230 vs. NCBI nr
Match: XP_011656930.1 (PREDICTED: dehydration-responsive element-binding protein 2A-like [Cucumis sativus] >KGN46703.1 hypothetical protein Csa_6G124180 [Cucumis sativus]) HSP 1 Score: 360.1 bits (923), Expect = 4.7e-96 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsGy6G010230 vs. NCBI nr
Match: XP_022140755.1 (putative dehydration-responsive element-binding protein 2H [Momordica charantia]) HSP 1 Score: 320.9 bits (821), Expect = 3.1e-84 Identity = 161/179 (89.94%), Postives = 168/179 (93.85%), Query Frame = 0
BLAST of CsGy6G010230 vs. NCBI nr
Match: XP_022944614.1 (dehydration-responsive element-binding protein 2A-like [Cucurbita moschata] >XP_022944615.1 dehydration-responsive element-binding protein 2A-like [Cucurbita moschata]) HSP 1 Score: 308.9 bits (790), Expect = 1.2e-80 Identity = 158/181 (87.29%), Postives = 164/181 (90.61%), Query Frame = 0
BLAST of CsGy6G010230 vs. NCBI nr
Match: XP_023513197.1 (dehydration-responsive element-binding protein 2A-like [Cucurbita pepo subsp. pepo] >XP_023513198.1 dehydration-responsive element-binding protein 2A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 307.0 bits (785), Expect = 4.7e-80 Identity = 157/181 (86.74%), Postives = 163/181 (90.06%), Query Frame = 0
BLAST of CsGy6G010230 vs. NCBI nr
Match: XP_022986391.1 (dehydration-responsive element-binding protein 2A-like [Cucurbita maxima] >XP_022986392.1 dehydration-responsive element-binding protein 2A-like [Cucurbita maxima]) HSP 1 Score: 306.6 bits (784), Expect = 6.1e-80 Identity = 157/181 (86.74%), Postives = 163/181 (90.06%), Query Frame = 0
BLAST of CsGy6G010230 vs. TAIR10
Match: AT5G05410.1 (DRE-binding protein 2A) HSP 1 Score: 172.6 bits (436), Expect = 2.5e-43 Identity = 84/130 (64.62%), Postives = 102/130 (78.46%), Query Frame = 0
BLAST of CsGy6G010230 vs. TAIR10
Match: AT3G11020.1 (DRE/CRT-binding protein 2B) HSP 1 Score: 165.2 bits (417), Expect = 4.0e-41 Identity = 85/146 (58.22%), Postives = 103/146 (70.55%), Query Frame = 0
BLAST of CsGy6G010230 vs. TAIR10
Match: AT2G40340.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 153.7 bits (387), Expect = 1.2e-37 Identity = 85/170 (50.00%), Postives = 109/170 (64.12%), Query Frame = 0
BLAST of CsGy6G010230 vs. TAIR10
Match: AT2G40350.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 150.2 bits (378), Expect = 1.3e-36 Identity = 75/127 (59.06%), Postives = 92/127 (72.44%), Query Frame = 0
BLAST of CsGy6G010230 vs. TAIR10
Match: AT2G38340.1 (Integrase-type DNA-binding superfamily protein) HSP 1 Score: 128.6 bits (322), Expect = 4.2e-30 Identity = 63/90 (70.00%), Postives = 67/90 (74.44%), Query Frame = 0
BLAST of CsGy6G010230 vs. Swiss-Prot
Match: sp|O82132|DRE2A_ARATH (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=3702 GN=DREB2A PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 4.5e-42 Identity = 84/130 (64.62%), Postives = 102/130 (78.46%), Query Frame = 0
BLAST of CsGy6G010230 vs. Swiss-Prot
Match: sp|Q5W6R4|DRE2B_ORYSJ (Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2B PE=2 SV=2) HSP 1 Score: 167.5 bits (423), Expect = 1.5e-40 Identity = 81/127 (63.78%), Postives = 95/127 (74.80%), Query Frame = 0
BLAST of CsGy6G010230 vs. Swiss-Prot
Match: sp|O82133|DRE2B_ARATH (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana OX=3702 GN=DREB2B PE=2 SV=1) HSP 1 Score: 165.2 bits (417), Expect = 7.2e-40 Identity = 85/146 (58.22%), Postives = 103/146 (70.55%), Query Frame = 0
BLAST of CsGy6G010230 vs. Swiss-Prot
Match: sp|A2WL19|DRE2A_ORYSI (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica OX=39946 GN=DREB2A PE=3 SV=2) HSP 1 Score: 163.3 bits (412), Expect = 2.7e-39 Identity = 87/157 (55.41%), Postives = 105/157 (66.88%), Query Frame = 0
BLAST of CsGy6G010230 vs. Swiss-Prot
Match: sp|Q0JQF7|DRE2A_ORYSJ (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2A PE=2 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 2.7e-39 Identity = 87/157 (55.41%), Postives = 105/157 (66.88%), Query Frame = 0
BLAST of CsGy6G010230 vs. TrEMBL
Match: tr|A0A0A0KB02|A0A0A0KB02_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G124180 PE=4 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 3.1e-96 Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
BLAST of CsGy6G010230 vs. TrEMBL
Match: tr|A0A1S3C3B5|A0A1S3C3B5_CUCME (putative dehydration-responsive element-binding protein 2H OS=Cucumis melo OX=3656 GN=LOC103496376 PE=4 SV=1) HSP 1 Score: 281.2 bits (718), Expect = 1.8e-72 Identity = 137/146 (93.84%), Postives = 137/146 (93.84%), Query Frame = 0
BLAST of CsGy6G010230 vs. TrEMBL
Match: tr|A0A251Q441|A0A251Q441_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G223300 PE=4 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 1.2e-60 Identity = 125/177 (70.62%), Postives = 136/177 (76.84%), Query Frame = 0
BLAST of CsGy6G010230 vs. TrEMBL
Match: tr|M5WWK2|M5WWK2_PRUPE (Uncharacterized protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa022733mg PE=4 SV=1) HSP 1 Score: 227.3 bits (578), Expect = 3.1e-56 Identity = 115/159 (72.33%), Postives = 124/159 (77.99%), Query Frame = 0
BLAST of CsGy6G010230 vs. TrEMBL
Match: tr|A0A2P5A805|A0A2P5A805_PARAD (AP2/ERF transcription factor OS=Parasponia andersonii OX=3476 GN=PanERF15 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 5.9e-55 Identity = 119/178 (66.85%), Postives = 134/178 (75.28%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|