CsGy6G008340 (gene) Cucumber (Gy14) v2 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsGy6G008340
Type	gene
Organism	Cucumis sativus (Cucumber (Gy14) v2)
Description	Autophagy-related protein 3
Location	Chr6 : 6949751 .. 6956283 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGTTAGATAGTATCGTTACATTAAAAACATTTAAAAGAAACTTTACGTTTCTCCGTTGAAGCCCAAATTTGGGTCATCTCCCCCATTGAAGCCCAATTTCGGTGGTCGATCAGAGTCAAGCTTCTGCTGGGGATTTCAATCTTCTCTTCCAATTTCCAATTTCTCAATTCTTCTCATCTCGATTTATCAATCCCACCCAGATTTGAGATCATGGTTTTATCCCAGAAGCTTCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACCGGACCTCGAACCGTCTCCGCTTTCAAAGAGAAAGGCGTTCTCAGTGTTTCTGAGTTCGTCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGGTATTTTCTTCTCCATTTCCATCGTCTTGTTTTCTTTATTCGTTATAATTCTTGGATATTTTAATTTCGTATTATTCAACTGCTGAATTGAACGATTATCTTTATTATTAGATTCGGTATATCAATTTTCTTTTGTGAATCTTGTCATTTTTGTTAATTCTGTTTTCAAGATAGTGGATGGAGGTCGTTTATGGTTGTTCAAAGGACATTGTGGTCAGTTGGTCTGTGTCGAACTGAAAGCCTTCCAAATTTTCAATGTAGACGTTGTTGAAGGAATATAGTTAACTCCCTTTTAGTGGATGGTAGAGCTTTGGAGTGGTTGAGAAAAATCCTTAATGCCATTTCGGTCAGAAGTTCTTCAGAAACTTAAATGGAGAGTGGTTAAATAGTGATATCCCATTGGTTTTTCATATTCTTCTGAAACTATGTTTATAGCCTTCTTTGAGAAGCAAGTTGGTTATTCGTTTTCGAAGTATAAAATTTAGTGGAACGAAATTAGAGTAGAAATCATAGTTTGTGTTTTCCAACTTACTTTTAGGCTCTTCGTGGTTGGACGGACAGTCGTAAGTCATAACGCATATGTTGGTTACTTCCCATCCTATTTCTTTTTCAGGCAAAGGACAATGTGGGTCTTTCCACAATCCCATGAAAACTGACGTTATTAGTGGCTCACTTGTTCAGTTATACTTTTTATGTTCTCACCTCCTCTATTCGTTTAACTCCTTAAGTTCTGGAAGTGTTTTAAAATTTGTCTATTATGTGTTAAAATATCTTTTCCTTGTTCATGATTTTAGGGAGTCGGGTGATCTGAACAAGAGGAAATCATATCTGCCCCCAGATAAGCAATTCTTGATTACCAGAAATGGTATAACAGCACAACCCTTAACTTCATTGTTTTGTATCTCTAAGCATTATTCTCGTTTCATTGCCTTAATGAAAAGTCTCGTATCCTTTTCAAAAAAAAATTCAATAAGAATTAAATGAATTTTTGCGTAATAATCTTCAAACTTGAGCTTTGTTGAGCCATTATAACAATTAAGGTAATAGTTCACTTTCTTTCCAGTTCCTTGCCTGCGACGGGCTGCCTCTGTTGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACCCATGGGAAACCAAAGGGTACCTTTATCTATGAGTTTGAAGCTAGGGATTTACATTAGGTAAATAACATGTGCTCTTTCATGCAGAAGAAAAAAGAGACGAAGAGGAAAATTTGCCTTCCTTGGAAACTCTTGAAATCAGCAGGACCAAGGTTGTTAAGTCGATTCCAAACTATTTTGGTGGTGAAGATGAAGATGATGTTCCTGACCTGGATGATATCGAAGAAACTGACAATGTTGTTGGAACTGATCCAGTATGTAAATTAAATTTTATGAGCAAATTGTGGCTTAAGAATATTCCTTTTACTAAAGGGCCTGCATAATCACTGCCCACCCTCATCCGCCCCAAAATTAACAGGAGTTTCAGCTATATCTATGTTTTGCAAGTTTGAGCTTTAATCCATGCTCTCTTAATTTGCTAGGCATAGAATGTGGAGAATAATCTGGATTTTTTCTGTGGTATCTGATCTTGAAAAAACTTTCTTGGTTTCCACAGAGAAAGCTTTTGGTTCTTTTTTTCTTTTATCATATACACTAACAACCATTTGGAATTAGAAAAATATTTATCCTCACATCCTGCGGCAGTTATTTTTTGATGAGAGATTCATGTTCGCATTTACTACTTCATTGTAGGCCACCCTGCCATTGACCTACCAAATTGCCCACGAACCTGATGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTAAGGAGATTTCTCTTGTTGTTCTTTTCGCTGTTTTTTTACTTATGAAGAATCGTATGTAATGTGTTGAATAAAAATGGATCGAAATTCATGAGTTAGGAGGAAAGAATCCTTCTATTTAGCAAACAAAAACTAGATGCAATTGAATAAATATCACTTGTAATGCAATTCGAGATATCCCACAAAAATTTTCCCTTCTATGAAATCCTCCACTTTTTTGACTCCAAATCTCCAAGTACTGCAAAGAATGGATTTAGGGGTAGAGTCATAAAATATTTGCATCAGATACCCCAAATGCAGGTTACTTTCTAGTTGTTTTTCATAGTTTTTCAGGAGAAAAGATAGTTATCATTAGGAACTTTTGGTAATTATTATTAGGTTCATTATTTTGAGCATTGGTGCAATACTTGGAGAATGAAGCCCTTGCCATTTTTCTTGAGTAGAAAATGAGGAAGTGTGGATTTATGGTTTAGAATTGAACTGCAGCCTATTCCATTGTTTTTTGTTCTTCCTTATCAATTTTGTGGTTATCTTATAACTGGTCATTAGTTACAACTTTTAAGGGTTTAGGCATATAGGTAAATGTTTCTGGTTTTAAACATTGTGGTCGTGAATTAAATCTTCAAAATTCACTACCACATTGGTACAACTGGTAGTGGTAGTGATCTTGGCTACAACCAGTGTTCCTGACTCTTAAGTCCTTTTGGTGAATCTCATTTAAAACCTACTTGATCTCAAGGACTCTGGGAAATATTGTTATTAATGAAGTTTTAGCTTTCCATGAGACATTTTCCTGTTGATTATTGTAGGTCAATTAAGTTTTATCAATGGTATATGTACATGAAATAACTATTAAACAAGGGAATATCCAGAGAAAAAGAATATACGAAAAATATCTTTGCAATAGTTAATCCTATGATACACCATGTATCTTTGTGAGGAAATTGTATCATGTCATGTTTGACCTAAAATAAGGAAGTTTGTTTATGTTCTATAATAATGCTTTTCCAGATTTCAAAAGTAGATAGTTGACTACAAGTTTGACAATGATGCTATTCTTTTCTAATATCAGGTATGATAAATATTATCAGACACCACGTGTTTGGCTTACAGGATATGATGAGGTTTGTATGTTTATGTGTATATGTATTTAAATGTGATTAACTGATAACAAAATGTTAATTATAATATTTTAATTTTCACACTACACATCTTGTTAGTGGGTTGTATAGGTAGAATATTGTGTGATATTATAACTTTGAAAAAGATCTAGACAACGAATGCAATGGAGTGAAATTGATTTTTTAGTTCTTCATTGGTGAATGGTAATTGGTGTGAATATAAAGAGGATTCAACGAGTGGCAGTTGTTTATCATCACTTTTCTATGTACTTCTCTGTAATGTATTTGTCTTTCTAGTTCAAATGCATATTGCCCATTGAAATTTCTTCTTATTTCTTGATTAGTTATCCCTCAATAGTTCATGGTTTATGTTTGATTACTGCTTAATAATGCTGTTTCATAAATTATCTTTTCTTTTCAAAGCTACAGAAAATACGGCACTAACTCTGCATGCTCACACTGACACCAACACTGCTTTCTATTGTGATAAAAGTTTTTTTTTCCACAATAGAATACAAATTTTTTACATGGACAACAATTTGTTATCTGATGCTTTAATTTGCAAGTTCTTTTAATGCTTTCTTACCCAATTTCTTTTAGCACATACATATTTGAATCATTGTGAACTATGACAGTCAAGGATGCTCTTACAGCCGGAACTTGTGCTTGAAGATGTTAGTCAAGATCATGCTCGAAAAACAGTAAGTTGTGAATATGTAATAATGTAGTTCTGCCATCTATATGAGGCCCAATTATTTGTTCTATATTATTTTCAGTTGATCTGTATGCTTAGGATTGACTTCTTCTTGTACCTTTTGCTATGCCACACTACTCAAAGAAAAGAGGAAAAAGAATATTAATAATCGAGAATTAGCTCTTACATCTAAATTCGAGACTTTATAAAATTTGAGAACTTGAACACAACAAATACACAAAGAAGAAAGAAAGAAAGAAGTAAAAACTTCTTAGTTAGCTAGTAACCTTTGCCTTTGCCTCCTTTATTCTGCAGCAGCTAAAAATCCAGATTTACAATGACAGTAATATCATATCCAGAAATGAAGGCTTGGCAATGAAAACATAATATTTTGATTAAACTTCTCAGGTGGAGCGAGACTTTGAAAGAATATTGACACCCAATGCACAACCTGGAACCAAAATATGGTTGGGTTCAGTTATGTCCATCAACTGAATTGTTGTTCTAAGTTCAAGTTCTCAGATAGTATGGATTATGGACTTCGATCCTTGTGGATGCGACAATACATAATTTTACACCTAGATAAGAGGCCCTATTTGGATTGACTTAAGAAAAAGATTGTCTAAAATACACTTCAAAAACTATTTTGAGTGGAAGGTGACTTATTTTTTAAATTAAAGACCTGAATGTATTCCAAACAAAACCAAGATTACCAACAAGAATCTGTTTTTGCTTTTGTATGCTGAACCAGTATGGGGGAGTCTGGAGAACCCATACATTTGTTTCATTGTCTACGAATGTCCTTACCAGTGTCATGTGGAACATGAATTTCCAAATACATTCTAAATTCAATATTTGGGATACAGGTGACCATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACACGGGGCTGTGATGAAAAAGATCATCGATGTGTTAATGTCCCGAGGTGTAGAACCTGAAGTTCACAAGTAATTATTTCAGTCTCTATTTAAAACAACAGATCTCCCTACAAGTTTGCACTTCTTGACAAATATAATCTGTTTTGTTATTCTAAGTGATTATTCTATTCTTGGTAATGAAGAACCTGTTATTCTTTAACTCTTGGGTTCAAGAGTTCCTATATCACTCCAAGCGACACAACAAAAACTTTTTTCTATTCTTTTATTAACTTATTTATGTATAGGATTCCATTCACTCTATGGTTGGGAACTAATGATTGATTCTGTCTACAAAGATTCTGGATTTACTCATTATCCTTGTTCCTAAGTATCTCAATCTCCTCTACTTGTTAATATTTTTCCTTGTATTTTTTGTAGGTATCTTTTCTTGTTCTTAAAATTTGTTGCATCTGTTATTCCGACTATTGAATATGATTATACTATGGACTTCGATCTCGGCGGCCCTAGCAGTCAATAACTGGTATTGATAAGCATTGTGAGAACAGCTGATCTTAGTTCCTTTTCAGCTTCCATCATCTTAAATTCATGCTTGTGTATATCAAAATTGCTGCTTATTATTACTTTTTAGCATTTATTTATTGGAGAAATTGCATGCATTGATAGATTCTGTACAGATTATTTAGGTTTCTTTTCTTAGGAATAGTAGTTGCGTACAATGTTCTTAGACTACACTCAGTACCTTTTAAATAATATTTTCATCCTCATCATCATTGTAAAAATAGTTGTAACTGTAATGTTGTTGATCTTCCAGCTGCTTTCATGTGTTGAAATAAGTCTATTTCTTTAGAAAATTCATGTACTTTTCAATCATTCATATATTTACTTCAAACTTTTTCTTCAGCTTAGATGAAGTTTAGTCGTTTTGAAAATTTCTGAAAGCCAGAGATCATGAAGTGTCAATTCTCTCTTTGTTTAATCATTCATCGCGTTACTGCCAGTAGGAACACTTGTAAGTTTGATTGATCCATGACTATATAGCCCACCTTGTAATGGGCAGGCATTTCTTTATTGCCTTTGCTGTTCGTTGCTTGAATCCAGCCTGACTGTTTGAATATATTTGATGCAGATCCGGTTATACATACGTGTGGGACATTTCACATCTGATGTTTCTGCAAATACAGGCTGACCCCTCGCTCTTTGTACATACACAACATGGGGTCTAAAAGTTACCCTCTTTTGGGCATATTTTGTGTTTTGGAAGTCTAATCTTGCCATTGCTTTCTGTCAAATCTTAGTTTGGGCATAAAGATCATTTGTGGTTCTTTGTAACATAACATGGAGCAGAAAGTTTCTGCTCTTCACAACTTACTATTCAATGGGAATTTGTTTGCTATTAAACTAGTGCAGCAAAAACTCATTTTCATCTTGTTGGGAAAAAAAAAATTGATTGAATGCCATTATTGCAATATAATACCTACCTATTAACAATCTCTCTTCAGGTTATGGATTTCTATTTGGCTAGTTTGCAAATTAAATCTTAA

mRNA sequence

CCGTTAGATAGTATCGTTACATTAAAAACATTTAAAAGAAACTTTACGTTTCTCCGTTGAAGCCCAAATTTGGGTCATCTCCCCCATTGAAGCCCAATTTCGGTGGTCGATCAGAGTCAAGCTTCTGCTGGGGATTTCAATCTTCTCTTCCAATTTCCAATTTCTCAATTCTTCTCATCTCGATTTATCAATCCCACCCAGATTTGAGATCATGGTTTTATCCCAGAAGCTTCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACCGGACCTCGAACCGTCTCCGCTTTCAAAGAGAAAGGCGTTCTCAGTGTTTCTGAGTTCGTCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGTGGATGGAGGTCGTTTATGGTTGTTCAAAGGACATTGTGGTCAGTTGTTCCTTGCCTGCGACGGGCTGCCTCTGTTGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACCCATGGGAAACCAAAGGAAGAAAAAAGAGACGAAGAGGAAAATTTGCCTTCCTTGGAAACTCTTGAAATCAGCAGGACCAAGGTTGTTAAGTCGATTCCAAACTATTTTGGTGGTGAAGATGAAGATGATGTTCCTGACCTGGATGATATCGAAGAAACTGACAATGTTGTTGGAACTGATCCAGCCACCCTGCCATTGACCTACCAAATTGCCCACGAACCTGATGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTATGATAAATATTATCAGACACCACGTGTTTGGCTTACAGGATATGATGAGCCGGAACTTGTGCTTGAAGATGTTAGTCAAGATCATGCTCGAAAAACAGTGACCATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACACGGGGCTGTGATGAAAAAGATCATCGATGTGTTAATGTCCCGAGGTGTAGAACCTGAAGTTCACAAGTATCTTTTCTTGTTCTTAAAATTTGTTGCATCTGTTATTCCGACTATTGAATATGATTATACTATGGACTTCGATCTCGGCGGCCCTAGCAGTCAATAACTGGTATTGATAAGCATTCTTAGATGAAGTTTAGTCGTTTTGAAAATTTCTGAAAGCCAGAGATCATGAAGTGTCAATTCTCTCTTTGTTTAATCATTCATCGCGTTACTGCCAGTAGGAACACTTATCCGGTTATACATACGTGTGGGACATTTCACATCTGATGTTTCTGCAAATACAGGCTGACCCCTCGCTCTTTGTACATACACAACATGGGGTCTAAAAGTTACCCTCTTTTGGGCATATTTTGTGTTTTGGAAGTCTAATCTTGCCATTGCTTTCTGTCAAATCTTAGTTTGGGCATAAAGATCATTTGTGGTTCTTTGTAACATAACATGGAGCAGAAAGTTTCTGCTCTTCACAACTTACTATTCAATGGGAATTTGTTTGCTATTAAACTAGTGCAGCAAAAACTCATTTTCATCTTGTTGGGAAAAAAAAAATTGATTGAATGCCATTATTGCAATATAATACCTACCTATTAACAATCTCTCTTCAGGTTATGGATTTCTATTTGGCTAGTTTGCAAATTAAATCTTAA

Coding sequence (CDS)

ATGGTTTTATCCCAGAAGCTTCACGAGGCCTTCAAAGGAACTGTTGAGAGGATCACCGGACCTCGAACCGTCTCCGCTTTCAAAGAGAAAGGCGTTCTCAGTGTTTCTGAGTTCGTCATCGCCGGTGATAATCTCGTCTCCAAGTGTCCCACCTGGTCTTGTGGATGGAGGTCGTTTATGGTTGTTCAAAGGACATTGTGGTCAGTTGTTCCTTGCCTGCGACGGGCTGCCTCTGTTGAAGAGGAGTATGAAGCTGCAGGTGGTGAAGTTCTTCTTGATAATGAAGATGGTGATGGCTGGCTGGCGACCCATGGGAAACCAAAGGAAGAAAAAAGAGACGAAGAGGAAAATTTGCCTTCCTTGGAAACTCTTGAAATCAGCAGGACCAAGGTTGTTAAGTCGATTCCAAACTATTTTGGTGGTGAAGATGAAGATGATGTTCCTGACCTGGATGATATCGAAGAAACTGACAATGTTGTTGGAACTGATCCAGCCACCCTGCCATTGACCTACCAAATTGCCCACGAACCTGATGACGATAATATCCTACGAACACGAACTTATGATGTCAGCATCACGTATGATAAATATTATCAGACACCACGTGTTTGGCTTACAGGATATGATGAGCCGGAACTTGTGCTTGAAGATGTTAGTCAAGATCATGCTCGAAAAACAGTGACCATTGAGGACCATCCCCACCTACCTGGAAAGCATGCGTCTGTACATCCCTGCAGACACGGGGCTGTGATGAAAAAGATCATCGATGTGTTAATGTCCCGAGGTGTAGAACCTGAAGTTCACAAGTATCTTTTCTTGTTCTTAAAATTTGTTGCATCTGTTATTCCGACTATTGAATATGATTATACTATGGACTTCGATCTCGGCGGCCCTAGCAGTCAATAA

Protein sequence

MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFMVVQRTLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEEKRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPDLDDIEETDNVVGTDPATLPLTYQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEPELVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEYDYTMDFDLGGPSSQ

Homology

[Close]

BLAST of CsGy6G008340 vs. NCBI nr
Match: XP_004140511.1 (PREDICTED: autophagy-related protein 3 [Cucumis sativus] >XP_011656844.1 PREDICTED: autophagy-related protein 3 [Cucumis sativus] >KGN46507.1 hypothetical protein Csa_6G104635 [Cucumis sativus])

HSP 1 Score: 543.9 bits (1400), Expect = 3.5e-151
Identity = 288/317 (90.85%), Postives = 291/317 (91.80%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWS  W S  
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
           + +R           +   VPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE
Sbjct: 61  LNKRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT
Sbjct: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300

Query: 301 IEYDYTMDFDLGGPSSQ 302
           IEYDYTMDFDLGGPSSQ
Sbjct: 301 IEYDYTMDFDLGGPSSQ 315

[Close]

BLAST of CsGy6G008340 vs. NCBI nr
Match: XP_008459789.1 (PREDICTED: autophagy-related protein 3 [Cucumis melo] >XP_008459790.1 PREDICTED: autophagy-related protein 3 [Cucumis melo])

HSP 1 Score: 535.8 bits (1379), Expect = 9.4e-149
Identity = 283/317 (89.27%), Postives = 288/317 (90.85%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWS  W S  
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
           + +R           +   VPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPKEE
Sbjct: 61  LNKRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K DEEENLPSLE LEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTD ATLPLT
Sbjct: 121 KSDEEENLPSLEALEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDAATLPLT 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300

Query: 301 IEYDYTMDFDLGGPSSQ 302
           IEYDYTMDFDLGGPSSQ
Sbjct: 301 IEYDYTMDFDLGGPSSQ 315

[Close]

BLAST of CsGy6G008340 vs. NCBI nr
Match: XP_022959442.1 (autophagy-related protein 3-like [Cucurbita moschata] >XP_022959443.1 autophagy-related protein 3-like [Cucurbita moschata] >XP_022959444.1 autophagy-related protein 3-like [Cucurbita moschata])

HSP 1 Score: 531.2 bits (1367), Expect = 2.3e-147
Identity = 269/317 (84.86%), Postives = 277/317 (87.38%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           M LSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWS  W S  
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
           + +R           +   VPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE
Sbjct: 61  INKRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K DEEENLPSLETLEISR KVVKSIPNYFGGEDE+D+P          V+GTD ATLPLT
Sbjct: 121 KSDEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLT 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300

Query: 301 IEYDYTMDFDLGGPSSQ 302
           IEYDYTMDFDLGGPSS+
Sbjct: 301 IEYDYTMDFDLGGPSSR 315

[Close]

BLAST of CsGy6G008340 vs. NCBI nr
Match: XP_022974286.1 (autophagy-related protein 3-like [Cucurbita maxima] >XP_022974287.1 autophagy-related protein 3-like [Cucurbita maxima] >XP_022974288.1 autophagy-related protein 3-like [Cucurbita maxima])

HSP 1 Score: 530.0 bits (1364), Expect = 5.2e-147
Identity = 268/317 (84.54%), Postives = 277/317 (87.38%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           M LSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWS  W S  
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
           + +R           +   VPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE
Sbjct: 61  INKRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K DEEENLPSLETLEISR KVVKSIPNYFGGEDE+D+P          V+GTD ATLPLT
Sbjct: 121 KSDEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLT 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300

Query: 301 IEYDYTMDFDLGGPSSQ 302
           IEYDYTMDFDLGGP+S+
Sbjct: 301 IEYDYTMDFDLGGPTSR 315

[Close]

BLAST of CsGy6G008340 vs. NCBI nr
Match: XP_023521024.1 (autophagy-related protein 3-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 528.1 bits (1359), Expect = 2.0e-146
Identity = 267/317 (84.23%), Postives = 277/317 (87.38%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           M LSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWS  W S  
Sbjct: 1   MALSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
           + +R           +   VPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE
Sbjct: 61  INKRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K DEEENLPSLETLEISR KVVKSIPNYFGGEDE+D+P          V+GTD ATLPLT
Sbjct: 121 KSDEEENLPSLETLEISRPKVVKSIPNYFGGEDEEDIPDLADIEDTDNVIGTDAATLPLT 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           YQIAHEPD+DNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YQIAHEPDNDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVH+YLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHRYLFLFLKFVASVIPT 300

Query: 301 IEYDYTMDFDLGGPSSQ 302
           IEYDYTMDFDLGGPSS+
Sbjct: 301 IEYDYTMDFDLGGPSSR 315

[Close]

BLAST of CsGy6G008340 vs. TAIR10
Match: AT5G61500.1 (autophagy 3 (APG3))

HSP 1 Score: 469.9 bits (1208), Expect = 1.2e-132
Identity = 237/316 (75.00%), Postives = 260/316 (82.28%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           MVLSQKLHEAFKGTVERITGPRT+SAFKEKGVLSVSEFV+AGDNLVSKCPTWS  W S  
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
             +R           +   VPCLRRAASV E+YEAAGGEVL+D+ED DGWLATHGKPK +
Sbjct: 61  ASKRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPK-D 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K  EE+NLPS++ L+I+    ++SIP YFGGE++DD+P          VV  DPATL  T
Sbjct: 121 KGKEEDNLPSMDALDINEKNTIQSIPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQST 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           Y +AHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDE      PELV+EDVSQDHAR
Sbjct: 181 YLVAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV KYLFLFLKF+ASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPT 300

[Close]

BLAST of CsGy6G008340 vs. Swiss-Prot
Match: sp|Q0WWQ1|ATG3_ARATH (Autophagy-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=ATG3 PE=1 SV=2)

HSP 1 Score: 469.9 bits (1208), Expect = 2.1e-131
Identity = 237/316 (75.00%), Postives = 260/316 (82.28%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           MVLSQKLHEAFKGTVERITGPRT+SAFKEKGVLSVSEFV+AGDNLVSKCPTWS  W S  
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTISAFKEKGVLSVSEFVLAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
             +R           +   VPCLRRAASV E+YEAAGGEVL+D+ED DGWLATHGKPK +
Sbjct: 61  ASKRKPYLPSDKQFLITRNVPCLRRAASVAEDYEAAGGEVLVDDEDNDGWLATHGKPK-D 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K  EE+NLPS++ L+I+    ++SIP YFGGE++DD+P          VV  DPATL  T
Sbjct: 121 KGKEEDNLPSMDALDINEKNTIQSIPTYFGGEEDDDIPDMEEFDEADNVVENDPATLQST 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           Y +AHEPDDDNILRTRTYD+SITYDKYYQTPRVWLTGYDE      PELV+EDVSQDHAR
Sbjct: 181 YLVAHEPDDDNILRTRTYDLSITYDKYYQTPRVWLTGYDESRMLLQPELVMEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV KYLFLFLKF+ASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFMASVIPT 300

[Close]

BLAST of CsGy6G008340 vs. Swiss-Prot
Match: sp|Q550A8|ATG3_DICDI (Autophagy-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=atg3 PE=3 SV=3)

HSP 1 Score: 203.8 bits (517), Expect = 2.8e-51
Identity = 136/335 (40.60%), Postives = 176/335 (52.54%), Query Frame = 0


Query: 5   QKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSF----- 64
           Q +H+A+  TVE++T   + S F E+GVL+  EFV AGD L  KC TW+  W S      
Sbjct: 7   QAVHKAYVKTVEKVTPTLSTSKFLEEGVLTPEEFVQAGDLLTDKCQTWT--WESGDPSRN 66

Query: 65  -----MVVQRTLWSVVPCLRRAASVEEEYEAA-GGEVLLDNEDGDGWLATHGKPKEEKRD 124
                   Q  L   VPC  R  ++E E +A+   E+ ++++  D W+A   +P   + D
Sbjct: 67  VSYLPKEKQFLLTRNVPCYNRVRTLENESKASKADEIQIEDDGEDSWVAP--QPVGNQDD 126

Query: 125 EEENLPSLETLEIS----------------------------RTKVVKSIPNYFGGEDED 184
            E+    + +L+I                                               
Sbjct: 127 IEDEKVDISSLKIDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 186

Query: 185 DVPXXXXXXXXXXVVGTDPATLPLTYQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWL 244
              XXXXXXXXXX                   D+DNILRTRTYD+SITYDKYYQTPRVWL
Sbjct: 187 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDNDNILRTRTYDISITYDKYYQTPRVWL 246

Query: 245 TGYDE------PELVLEDVSQDHARKTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLM 295
            GYDE      PE + ED+S+DHA KTVTI+ HPHL    A +HPCRH AVMKK++D   
Sbjct: 247 FGYDENRKPLKPEEIFEDISEDHAHKTVTIDSHPHLGISFAYIHPCRHAAVMKKLVDRQS 306

[Close]

BLAST of CsGy6G008340 vs. Swiss-Prot
Match: sp|Q0VCL3|ATG3_BOVIN (Ubiquitin-like-conjugating enzyme ATG3 OS=Bos taurus OX=9913 GN=ATG3 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-47
Identity = 124/305 (40.66%), Postives = 163/305 (53.44%), Query Frame = 0


Query: 16  ERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFMVVQRTLWS------- 75
           E +T     S FKE GV++  EFV AGD+LV  CPTW       + V+  L S       
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPSGKQFLVT 76

Query: 76  -VVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLATH---GKPKEEKRDEEENLPSLET 135
             VPC +R   +E   E    E +++ +DGD GW+ T+   G     +  +E  L S ++
Sbjct: 77  KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGIAGITEAVKEITLESKDS 136

Query: 136 LEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLTYQI------AHEP 195
           +++     +             D+           ++ TD ATL     +          
Sbjct: 137 IKLQDCSALCEEXXXXXXXXXADM----EEYEESGLLETDEATLDTRKIVEACKAKTDAG 196

Query: 196 DDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEP------ELVLEDVSQDHARKTVTIED 255
            +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE       E + ED+SQDH +KTVTIE+
Sbjct: 197 GEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIEN 256

Query: 256 HPHL-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEYDYT 296
           HPHL P    SVHPCRH  VMKKII+ +   G E  VH YL +FLKFV +VIPTIEYDYT
Sbjct: 257 HPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYDYT 314

[Close]

BLAST of CsGy6G008340 vs. Swiss-Prot
Match: sp|Q9NT62|ATG3_HUMAN (Ubiquitin-like-conjugating enzyme ATG3 OS=Homo sapiens OX=9606 GN=ATG3 PE=1 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-47
Identity = 124/308 (40.26%), Postives = 161/308 (52.27%), Query Frame = 0


Query: 16  ERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFMVV--------QRTLW 75
           E +T     S FKE GV++  EFV AGD+LV  CPTW       + V        Q  + 
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVT 76

Query: 76  SVVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLATH------GKPKEEKRDEEENLPS 135
             VPC +R   +E   E    E +++ +DGD GW+ T+      G  +  K    EN  +
Sbjct: 77  KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLENKDN 136

Query: 136 LETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLTYQI------A 195
           +   + S     +         D ++            ++ TD ATL     +       
Sbjct: 137 IRLQDCSALCEEEXXXXXXXAADMEE-------YEESGLLETDEATLDTRKIVEACKAKT 196

Query: 196 HEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEP------ELVLEDVSQDHARKTVT 255
               +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE       E + ED+SQDH +KTVT
Sbjct: 197 DAGGEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVT 256

Query: 256 IEDHPHL-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEY 296
           IE+HPHL P    SVHPCRH  VMKKII+ +   G E  VH YL +FLKFV +VIPTIEY
Sbjct: 257 IENHPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEY 314

[Close]

BLAST of CsGy6G008340 vs. Swiss-Prot
Match: sp|Q6AZ50|ATG3_RAT (Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=2 SV=1)

HSP 1 Score: 190.3 bits (482), Expect = 3.2e-47
Identity = 124/305 (40.66%), Postives = 163/305 (53.44%), Query Frame = 0


Query: 16  ERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFMVV--------QRTLW 75
           E +T     S FKE GV++  EFV AGD+LV  CPTW       + V        Q  + 
Sbjct: 17  EYLTPVLKESKFKETGVITPEEFVAAGDHLVHHCPTWQWATGEELKVKAYLPTGKQFLVT 76

Query: 76  SVVPCLRRAASVEEEYEAAGGEVLLDNEDGD-GWLATH---GKPKEEKRDEEENLPSLET 135
             VPC +R   +E   E    E +++ +DGD GW+ T+   G     +  +E  L S ++
Sbjct: 77  KNVPCYKRCKQMEYSDEL---EAIIEEDDGDGGWVDTYHNTGITGITEAVKEITLESKDS 136

Query: 136 LEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLTYQI------AHEP 195
           +++    V+              +           ++ TD ATL     +      A   
Sbjct: 137 IKLQDCSVLCDEXXXXXXXXXXXM----EEYEESGLLETDEATLDTRRIVEACKAKADAG 196

Query: 196 DDDNILRTRTYDVSITYDKYYQTPRVWLTGYDEP------ELVLEDVSQDHARKTVTIED 255
            +D IL+TRTYD+ ITYDKYYQTPR+WL GYDE       E + ED+SQDH +KTVTIE+
Sbjct: 197 GEDAILQTRTYDLYITYDKYYQTPRLWLFGYDEQRQPLTVEHMYEDISQDHVKKTVTIEN 256

Query: 256 HPHL-PGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPTIEYDYT 296
           HPHL P    SVHPCRH  VMKKII+ +   G E  VH YL +FLKFV +VIPTIEYDYT
Sbjct: 257 HPHLPPPPMCSVHPCRHAEVMKKIIETVAEGGGELGVHMYLLIFLKFVQAVIPTIEYDYT 314

[Close]

BLAST of CsGy6G008340 vs. TrEMBL
Match: tr|A0A0A0KDT1|A0A0A0KDT1_CUCSA (Autophagy-related protein 3 OS=Cucumis sativus OX=3659 GN=Csa_6G104635 PE=3 SV=1)

HSP 1 Score: 543.9 bits (1400), Expect = 2.3e-151
Identity = 288/317 (90.85%), Postives = 291/317 (91.80%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWS  W S  
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
           + +R           +   VPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE
Sbjct: 61  LNKRKSYLPPDKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT
Sbjct: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300

Query: 301 IEYDYTMDFDLGGPSSQ 302
           IEYDYTMDFDLGGPSSQ
Sbjct: 301 IEYDYTMDFDLGGPSSQ 315

[Close]

BLAST of CsGy6G008340 vs. TrEMBL
Match: tr|A0A1S3CAI3|A0A1S3CAI3_CUCME (Autophagy-related protein 3 OS=Cucumis melo OX=3656 GN=LOC103498815 PE=3 SV=1)

HSP 1 Score: 535.8 bits (1379), Expect = 6.2e-149
Identity = 283/317 (89.27%), Postives = 288/317 (90.85%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWS  W S  
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWS--WESGD 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
           + +R           +   VPCLRRAAS+EEEYEAAGGEVLLDNEDGDGWLATHGKPKEE
Sbjct: 61  LNKRKSYLPPDKQFLITRNVPCLRRAASIEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K DEEENLPSLE LEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTD ATLPLT
Sbjct: 121 KSDEEENLPSLEALEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDAATLPLT 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300

Query: 301 IEYDYTMDFDLGGPSSQ 302
           IEYDYTMDFDLGGPSSQ
Sbjct: 301 IEYDYTMDFDLGGPSSQ 315

[Close]

BLAST of CsGy6G008340 vs. TrEMBL
Match: tr|A0A2P2LY92|A0A2P2LY92_RHIMU (Autophagy-related protein 3 OS=Rhizophora mucronata OX=61149 PE=3 SV=1)

HSP 1 Score: 491.1 bits (1263), Expect = 1.8e-135
Identity = 249/316 (78.80%), Postives = 264/316 (83.54%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           MVLSQKLHEAFKGTVERIT PRTVSAFKEKGVLSVSEFVIAGDNLV+KCPTWS  W S  
Sbjct: 1   MVLSQKLHEAFKGTVERITSPRTVSAFKEKGVLSVSEFVIAGDNLVAKCPTWS--WESGE 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
             +R           +   VPCLRRAASVEEEYEAAGGEVLLDNED DGWLATHGKPKE 
Sbjct: 61  PSKRKPYLPQYKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKEN 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K DE+ENLPS+E LEIS+   ++SIP+YFGGE+E+D+P           + TDPATLP T
Sbjct: 121 KNDEDENLPSMEALEISKKNHIQSIPSYFGGEEEEDIPDMADYEDPDNPIETDPATLPST 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           Y +AHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YLVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV KYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 300

[Close]

BLAST of CsGy6G008340 vs. TrEMBL
Match: tr|A0A2C9VRX6|A0A2C9VRX6_MANES (Autophagy-related protein 3 OS=Manihot esculenta OX=3983 GN=MANES_06G132800 PE=3 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 1.5e-134
Identity = 246/316 (77.85%), Postives = 268/316 (84.81%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGW---- 60
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF+IAGDNLVSKCPTWS  W    
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFIIAGDNLVSKCPTWS--WESGE 60

Query: 61  ----RSFMVVQR--TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
               +S++  ++   +   VPCLRRAASVEEEYEAAGGEVLLDNED DGWLATHGKPKE 
Sbjct: 61  PNKRKSYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKET 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
           K DE++N+PS+E LEIS+   ++SIP+YFGGE+E+D+P          ++ TDPATL  T
Sbjct: 121 KGDEDDNVPSMEALEISKKNHIQSIPSYFGGEEEEDIPDMTDYEDPNNLIETDPATLHST 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           Y +AHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YLVAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEV KYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVDKYLFLFLKFVASVIPT 300

[Close]

BLAST of CsGy6G008340 vs. TrEMBL
Match: tr|B9R9V7|B9R9V7_RICCO (Autophagy-related protein 3 OS=Ricinus communis OX=3988 GN=RCOM_1500910 PE=3 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.5e-134
Identity = 246/316 (77.85%), Postives = 264/316 (83.54%), Query Frame = 0


Query: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFVIAGDNLVSKCPTWSCGWRSFM 60
           MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEF++AGDNLV+KCPTWS  W S  
Sbjct: 1   MVLSQKLHEAFKGTVERITGPRTVSAFKEKGVLSVSEFILAGDNLVAKCPTWS--WESGE 60

Query: 61  VVQR----------TLWSVVPCLRRAASVEEEYEAAGGEVLLDNEDGDGWLATHGKPKEE 120
             +R           +   VPCLRRAASVEEEYEAAGGEVLLDNED DGWLATHGKPKE 
Sbjct: 61  PSKRMSYLPPEKQFLITRNVPCLRRAASVEEEYEAAGGEVLLDNEDNDGWLATHGKPKES 120

Query: 121 KRDEEENLPSLETLEISRTKVVKSIPNYFGGEDEDDVPXXXXXXXXXXVVGTDPATLPLT 180
             DE+EN+PSLE LEIS+   + SIP+YFGG++E+D+P          ++ +DPATL  T
Sbjct: 121 TGDEDENVPSLEALEISKKSPIHSIPSYFGGKEEEDIPDMDDYEDPNNLIESDPATLQST 180

Query: 181 YQIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE------PELVLEDVSQDHAR 240
           Y IAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDE      PELVLEDVSQDHAR
Sbjct: 181 YLIAHEPDDDNILRTRTYDVSITYDKYYQTPRVWLTGYDESRMLLQPELVLEDVSQDHAR 240

Query: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300
           KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT
Sbjct: 241 KTVTIEDHPHLPGKHASVHPCRHGAVMKKIIDVLMSRGVEPEVHKYLFLFLKFVASVIPT 300

The following BLAST results are available for this feature:

BLAST of CsGy6G008340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140511.1	3.5e-151	90.85	PREDICTED: autophagy-related protein 3 [Cucumis sativus] >XP_011656844.1 PREDICT...	[more]
XP_008459789.1	9.4e-149	89.27	PREDICTED: autophagy-related protein 3 [Cucumis melo] >XP_008459790.1 PREDICTED:...	[more]
XP_022959442.1	2.3e-147	84.86	autophagy-related protein 3-like [Cucurbita moschata] >XP_022959443.1 autophagy-...	[more]
XP_022974286.1	5.2e-147	84.54	autophagy-related protein 3-like [Cucurbita maxima] >XP_022974287.1 autophagy-re...	[more]
XP_023521024.1	2.0e-146	84.23	autophagy-related protein 3-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsGy6G008340 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G61500.1	1.2e-132	75.00	autophagy 3 (APG3)	[more]

BLAST of CsGy6G008340 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WWQ1\|ATG3_ARATH	2.1e-131	75.00	Autophagy-related protein 3 OS=Arabidopsis thaliana OX=3702 GN=ATG3 PE=1 SV=2	[more]
sp\|Q550A8\|ATG3_DICDI	2.8e-51	40.60	Autophagy-related protein 3 OS=Dictyostelium discoideum OX=44689 GN=atg3 PE=3 SV...	[more]
sp\|Q0VCL3\|ATG3_BOVIN	3.2e-47	40.66	Ubiquitin-like-conjugating enzyme ATG3 OS=Bos taurus OX=9913 GN=ATG3 PE=2 SV=1	[more]
sp\|Q9NT62\|ATG3_HUMAN	3.2e-47	40.26	Ubiquitin-like-conjugating enzyme ATG3 OS=Homo sapiens OX=9606 GN=ATG3 PE=1 SV=1	[more]
sp\|Q6AZ50\|ATG3_RAT	3.2e-47	40.66	Ubiquitin-like-conjugating enzyme ATG3 OS=Rattus norvegicus OX=10116 GN=Atg3 PE=...	[more]

BLAST of CsGy6G008340 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KDT1\|A0A0A0KDT1_CUCSA	2.3e-151	90.85	Autophagy-related protein 3 OS=Cucumis sativus OX=3659 GN=Csa_6G104635 PE=3 SV=1	[more]
tr\|A0A1S3CAI3\|A0A1S3CAI3_CUCME	6.2e-149	89.27	Autophagy-related protein 3 OS=Cucumis melo OX=3656 GN=LOC103498815 PE=3 SV=1	[more]
tr\|A0A2P2LY92\|A0A2P2LY92_RHIMU	1.8e-135	78.80	Autophagy-related protein 3 OS=Rhizophora mucronata OX=61149 PE=3 SV=1	[more]
tr\|A0A2C9VRX6\|A0A2C9VRX6_MANES	1.5e-134	77.85	Autophagy-related protein 3 OS=Manihot esculenta OX=3983 GN=MANES_06G132800 PE=3...	[more]
tr\|B9R9V7\|B9R9V7_RICCO	2.5e-134	77.85	Autophagy-related protein 3 OS=Ricinus communis OX=3988 GN=RCOM_1500910 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007134	Autophagy-rel_prot_3_N
IPR007135	Autophagy-rel_prot_3
IPR019461	Autophagy-rel_prot_3_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006914	autophagy
biological_process	GO:0015031	protein transport
biological_process	GO:0008150	biological_process
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsGy6G008340.1	CsGy6G008340.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber Gy14 genome (v2)
Date Performed: 2018-09-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019461	Autophagy-related protein 3, C-terminal	PFAM	PF10381	Autophagy_C	coord: 267..291 e-value: 2.1E-15 score: 55.8
None	No IPR available	GENE3D	G3DSA:3.30.1460.50		coord: 166..300 e-value: 2.7E-58 score: 198.7
None	No IPR available	GENE3D	G3DSA:3.30.1460.50		coord: 26..155 e-value: 1.3E-9 score: 40.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 99..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..117
None	No IPR available	PANTHER	PTHR12866:SF2	UBIQUITIN-LIKE-CONJUGATING ENZYME ATG3	coord: 4..293
None	No IPR available	PANTHER	PTHR12866	AUTOPHAGOCYTOSIS PROTEIN AUT1-RELATED	coord: 4..293
IPR007135	Autophagy-related protein 3	PFAM	PF03987	Autophagy_act_C	coord: 192..246 e-value: 9.9E-17 score: 61.2
IPR007134	Autophagy-related protein 3, N-terminal	PFAM	PF03986	Autophagy_N	coord: 7..124 e-value: 1.9E-18 score: 66.6

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsGy6G008340	Cla006718	Watermelon (97103) v1	cgybwmB505
CsGy6G008340	MELO3C022280	Melon (DHL92) v3.5.1	cgybmeB371
CsGy6G008340	ClCG06G002480	Watermelon (Charleston Gray)	cgybwcgB445
CsGy6G008340	CSPI06G08260	Wild cucumber (PI 183967)	cgybcpiB288
CsGy6G008340	CmaCh08G001490	Cucurbita maxima (Rimu)	cgybcmaB866
CsGy6G008340	CmoCh08G001500	Cucurbita moschata (Rifu)	cgybcmoB848
CsGy6G008340	CmoCh17G004940	Cucurbita moschata (Rifu)	cgybcmoB737
CsGy6G008340	Lsi09G016870	Bottle gourd (USVL1VR-Ls)	cgyblsiB362
CsGy6G008340	Cp4.1LG17g10580	Cucurbita pepo (Zucchini)	cgybcpeB778
CsGy6G008340	MELO3C022280.2	Melon (DHL92) v3.6.1	cgybmedB372
CsGy6G008340	CsaV3_6G008640	Cucumber (Chinese Long) v3	cgybcucB298
CsGy6G008340	Cla97C06G111850	Watermelon (97103) v2	cgybwmbB453
CsGy6G008340	Bhi12G001982	Wax gourd	cgybwgoB511
CsGy6G008340	Carg26729	Silver-seed gourd	carcgybB0147
CsGy6G008340	Carg04976	Silver-seed gourd	carcgybB0089

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsGy6G008340	Cucurbita maxima (Rimu)	cgybcmaB756
CsGy6G008340	Cucurbita pepo (Zucchini)	cgybcpeB729
CsGy6G008340	Cucurbita pepo (Zucchini)	cgybcpeB732
CsGy6G008340	Cucumber (Chinese Long) v2	cgybcuB282
CsGy6G008340	Bottle gourd (USVL1VR-Ls)	cgyblsiB366
CsGy6G008340	Watermelon (Charleston Gray)	cgybwcgB438
CsGy6G008340	Watermelon (97103) v1	cgybwmB509
CsGy6G008340	Watermelon (97103) v2	cgybwmbB446